Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0012253

Physical Location & Seq

Genomic Coordinates Forward (+)

970246 .. 989703

Gene Structure 19458 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G001200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGGGGGCTTCGCAGGCCGCCAGCCTATGGGTTCTGCTGGGCTTGGGCTTGGCCGGAATCCTGATAATGACTCGGAAGCTGAAGCAGGTCATCCGAGAAGACTTCGGCGCCTTCGTTGAGAAGCTTCAGCTCCTCCCTCCTCCGCAGCCGGCTCCGCCCAAAGCTCCCCACCCCCTCACCGGCCTCACCTTCGCCGTTTCCGACGTGTTTGATATAGAGGGCTATGTGACTGGATTCGGTCATCCTGATTGGGCAAAAACACATGATCCAGCTTCTCGGACATCTCCTGTGGTTACCATGCTTGTTGAAGGAGGAGCCACATGCATTGGAAAAACTGTTGTGGATGAATTGGCATATAGCATTTCTGGAGAAAATGAGCATTACTTTACACCCACCAACCCTACAGCGCCATCAAAAACACCAGGTGGATCCTCCAGTGGAGCTGCGGTGGCTGTAGCGGCTAATCTTGCTGACTTTTCCCTGGGTATTGATACTGTTGGTGGTGTTAGAGTACCTGCGGCATTTTGTGGCATTATGGGATTCCGACCTTCACATGGGGCACTTTCTCACACTGGAATTATACCTGTCTCTACAAGTCTTGATACCGTGGGATGGTTTGCCAAGGATCCTAAGGTTCTAGGTAGGGTTGGTCACGTGTTGCTGCAACTTCCCCATGCATATTCACGCAGTCCAAGACAAATTGTGATGGCTGATGATTGCCTACAACAAGTAAAGGTTCCTACTGACAGGATTGCTCAAGTAGTTGTCAAATCCACTGAGAAGCTTTTTGGAAGACAAGTATTGAAGCATGAAAATCTTGAAGACTATTTCAATTTGAAAGTTCCAAGCTTGAGAAAGTTTCATGGTGAGAAGACAAATGGTGTTGTAAAGGTTTCATCAATAAAACTGCTTGCCAATGTTGCACAGTTTCTTCAAAGACATGAGTTCAAACAAAATCATGACGAATGGATTAATTTGGTGAAGCCTACTTTGGATCCTGCTACTTCAGCTCAGATATGTGGGCCACCGGAGTCATCAGATATGGAGGTTGAGATCTGCAAGTCCATTAAAAATGAATTGCATGCAGCTGTCAACTCTCTATTGAAGGATGATGGGATTCTGGTGATCCCGACCGTGGCAGATCCTCCTTCGAAACTTGGTGGGAAGACTCTCCTCTCTGATGAATTCCGTAGTCGTGCTTTTGGTTTGTTAAGTATTGCAAGCCTATCAGGTTGCTGTCAGGTCACAATACCACTTGGACTTCATAACAAGAATCCTGTTTCAGTTTCTTTTATAGCCAGGCATGGGGGTGATCGCTTTTTACTAGATACATTGCAGACAATGTACACATCTTTACAGGAGCAGGCTGATCTTGTTACAAACACCAAATTATCAAAAAATGCACTCACCAGAGAGCAATCTGCTGAAGTTTCCAAGGAAAAGGGAAACAAAGCATACAAAGACAAAGAGTATCAGAAAGCTATTGGGTTTTATTCGGAAGCCATAAAACTTAGTGGCAATAATGCAACATATTACAGTAACAGGGCCGCAGCATATCTGGAAATTGGAAGTTTCGCTCAAGCTGAGGCAGATTGTAGTCAGGCTATCAACCTCGACAAAAAGAATGTGAAGGCTTATTTTCGAAGAGGCACTGCAAGGGAGGTGCTTGGGTACTATAAGGAGGCAATTGAAGATTTTAAATATGCACATGTTCTTGAACCAACGAATAAAACAGCAGCCGCTGCTGCTGAAAGATTGAGGAAATTATTTCTTCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0016020 GO:0016021 GO:0019867 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031354 GO:0031355 GO:0031358 GO:0031359 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko00330 ko00360 ko00380 ko00627 ko00643 ko01120 map00330 map00360 map00380 map00627 map00643 map01120

Pfam Domains

Protein Families

Amidase TPR_11 TPR_16 TPR_2 TPR_8

Protein Analysis

592

Amino Acids

64.18

Weight (kDa)

8.66

Isoelectric Point (pI)

30.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Amidase	PF01425	56 - 442	1.2e-48	Amidase
TPR_BSK1_C	PF25575	448 - 542	1.8e-07	Serine/threonine-protein kinase BSK1-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012253)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17970 AT3G17970
fragaria_vesca	FvH4_5g17380
malus_domestica	MD06G1227100.v1.1 MD14G1236500.v1.1
prunus_persica	Prupe.5G233600_v2.0.a1
pyrus_communis	pycom06g20340 pycom14g19750
rosa_chinensis	RchiOBHm_Chr7g0178361
rosa_laevigata	RLG00000005452
rosa_roxburghii	Rroxscaffold_3G00274980
rosa_rugosa	Rorug06G0416300 Rorug06G0416400
rosa_samantha	Rh7AG015100 Rh7BG014600 Rh7CG014600 Rh7DG014900
rosa_wichuraiana	Rw0G010200 Rw7G001200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	76, 523
AccB1I	GGYRCC	1 cut(s)	107
AccB7I	CCANNNNNTGG	1 cut(s)	27
AciI	CCGC	8 cut(s)	18, 143, 155, 446, 458, 518, 1548, 1740
AclWI	GGATC	9 cut(s)	260, 423, 436, 620, 633, 989, 1002, 1120, 1136
AcoI	YGGCCR	1 cut(s)	51
AcsI	RAATTY	1 cut(s)	1184
AcuI	CTGAAG	4 cut(s)	101, 110, 990, 1446
AcvI	CACGTG	1 cut(s)	655
AcyI	GRCGYC	1 cut(s)	108
AdeI	CACNNNGTG	1 cut(s)	425
AfaI	GTAC	3 cut(s)	513, 1346, 1673
AfiI	CCNNNNNNNGG	6 cut(s)	27, 179, 554, 612, 1135, 1305
AflIII	ACRYGT	3 cut(s)	204, 654, 1708
AjiI	CACGTC	1 cut(s)	205
AjnI	CCWGG	3 cut(s)	421, 480, 1298
AjuI	GAANNNNNNNTTGG	2 cut(s)	974, 1006
Alw26I	GTCTC	1 cut(s)	592
AlwI	GGATC	9 cut(s)	260, 423, 436, 620, 633, 989, 1002, 1120, 1136
AlwNI	CAGNNNCTG	1 cut(s)	1742
AoxI	GGCC	5 cut(s)	15, 51, 181, 1022, 1545
ApeKI	GCWGC	8 cut(s)	145, 443, 661, 1085, 1550, 1736, 1742, 1745
ApoI	RAATTY	1 cut(s)	1184
AseI	ATTAAT	1 cut(s)	972
AspLEI	GCGC	2 cut(s)	110, 409
AspS9I	GGNCC	2 cut(s)	1022, 1545
AsuHPI	GGTGA	7 cut(s)	169, 178, 878, 991, 1135, 1322, 1399
AsuII	TTCGAA	2 cut(s)	1151, 1642
AxyI	CCTNAGG	1 cut(s)	630
BaeGI	GKGCMC	1 cut(s)	562
BamHI	GGATCC	3 cut(s)	428, 625, 994
BanI	GGYRCC	1 cut(s)	107
BbrPI	CACGTG	1 cut(s)	655
BbsI	GAAGAC	5 cut(s)	105, 799, 828, 878, 1172
BbvCI	CCTCAGC	1 cut(s)	1584
BbvI	GCAGC	8 cut(s)	157, 430, 648, 1097, 1562, 1729, 1732, 1748
BccI	CCATC	4 cut(s)	418, 606, 700, 1106
BceAI	ACGGC	1 cut(s)	179
BciT130I	CCWGG	3 cut(s)	423, 482, 1300
BcoDI	GTCTC	1 cut(s)	592
BfaI	CTAG	2 cut(s)	638, 1325
BfmI	CTRYAG	2 cut(s)	402, 453
BfoI	RGCGCY	2 cut(s)	111, 410
BfuAI	ACCTGC	2 cut(s)	76, 523
BglII	AGATCT	1 cut(s)	1053
Bme1390I	CCNGG	3 cut(s)	423, 482, 1300
BmgBI	CACGTC	1 cut(s)	205
BmgT120I	GGNCC	2 cut(s)	1022, 1545
BmiI	GGNNCC	7 cut(s)	109, 153, 316, 430, 627, 738, 996
BmrFI	CCNGG	3 cut(s)	423, 482, 1300
BpiI	GAAGAC	5 cut(s)	105, 799, 828, 878, 1172
BpmI	CTGGAG	2 cut(s)	387, 418
Bpu10I	CCTNAGC	1 cut(s)	1584
Bpu14I	TTCGAA	2 cut(s)	1151, 1642
BpuEI	CTTGAG	3 cut(s)	741, 871, 1563
BsaAI	YACGTR	1 cut(s)	655
BsaHI	GRCGYC	1 cut(s)	108
BsaJI	CCNNGG	6 cut(s)	480, 481, 606, 621, 1134, 1434
BsaWI	WCCGGW	1 cut(s)	1027
BsaXI	ACNNNNNCTCC	2 cut(s)	432, 462
Bsc4I	CCNNNNNNNGG	6 cut(s)	27, 179, 554, 612, 1135, 1305
Bse118I	RCCGGY	2 cut(s)	148, 179
Bse1I	ACTGG	3 cut(s)	235, 435, 577
Bse21I	CCTNAGG	1 cut(s)	630
Bse3DI	GCAATG	1 cut(s)	1331
BseBI	CCWGG	3 cut(s)	423, 482, 1300
BseDI	CCNNGG	6 cut(s)	480, 481, 606, 621, 1134, 1434
BseGI	GGATG	5 cut(s)	90, 241, 349, 617, 1114
BseLI	CCNNNNNNNGG	6 cut(s)	27, 179, 554, 612, 1135, 1305
BseMI	GCAATG	1 cut(s)	1331
BseMII	CTCAG	3 cut(s)	768, 1025, 1575
BseNI	ACTGG	3 cut(s)	235, 435, 577
BseRI	GAGGAG	4 cut(s)	122, 129, 327, 1163
BseSI	GKGCMC	1 cut(s)	562
BseXI	GCAGC	8 cut(s)	157, 430, 648, 1097, 1562, 1729, 1732, 1748
BseYI	CCCAGC	1 cut(s)	37
Bsh1285I	CGRYCG	1 cut(s)	1134
BshFI	GGCC	5 cut(s)	17, 53, 183, 1024, 1547
BshNI	GGYRCC	1 cut(s)	107
BsiEI	CGRYCG	1 cut(s)	1134
BsiSI	CCGG	4 cut(s)	54, 149, 180, 1028
BslI	CCNNNNNNNGG	6 cut(s)	27, 179, 554, 612, 1135, 1305
BsmAI	GTCTC	1 cut(s)	592
BsnI	GGCC	5 cut(s)	17, 53, 183, 1024, 1547
Bsp119I	TTCGAA	2 cut(s)	1151, 1642
Bsp1286I	GDGCHC	1 cut(s)	562
Bsp1407I	TGTACA	1 cut(s)	1344
Bsp143I	GATC	9 cut(s)	265, 428, 625, 994, 1053, 1125, 1141, 1312, 1369
BspACI	CCGC	8 cut(s)	18, 143, 155, 446, 458, 518, 1548, 1740
BspANI	GGCC	5 cut(s)	17, 53, 183, 1024, 1547
BspCNI	CTCAG	3 cut(s)	769, 1024, 1576
BspHI	TCATGA	1 cut(s)	958
BspLI	GGNNCC	7 cut(s)	109, 153, 316, 430, 627, 738, 996
BspMI	ACCTGC	2 cut(s)	76, 523
BspPI	GGATC	9 cut(s)	260, 423, 436, 620, 633, 989, 1002, 1120, 1136
BspT104I	TTCGAA	2 cut(s)	1151, 1642
BspT107I	GGYRCC	1 cut(s)	107
BsrDI	GCAATG	1 cut(s)	1331
BsrFI	RCCGGY	2 cut(s)	148, 179
BsrGI	TGTACA	1 cut(s)	1344
BsrI	ACTGG	3 cut(s)	235, 435, 577
BssAI	RCCGGY	2 cut(s)	148, 179
BssECI	CCNNGG	6 cut(s)	480, 481, 606, 621, 1134, 1434
BssMI	GATC	9 cut(s)	265, 428, 625, 994, 1053, 1125, 1141, 1312, 1369
BssNI	GRCGYC	1 cut(s)	108
BssT1I	CCWWGG	2 cut(s)	621, 1434
Bst2UI	CCWGG	3 cut(s)	423, 482, 1300
Bst4CI	ACNGT	6 cut(s)	337, 496, 607, 927, 1135, 1538
Bst6I	CTCTTC	1 cut(s)	1639
BstACI	GRCGYC	1 cut(s)	108
BstAPI	GCANNNNNTGC	1 cut(s)	1742
BstAUI	TGTACA	1 cut(s)	1344
BstBAI	YACGTR	1 cut(s)	655
BstBI	TTCGAA	2 cut(s)	1151, 1642
BstC8I	GCNNGC	7 cut(s)	15, 22, 150, 912, 1083, 1222, 1365
BstDEI	CTNAG	5 cut(s)	630, 777, 1011, 1511, 1584
BstDSI	CCRYGG	2 cut(s)	606, 1134
BstEII	GGTNACC	1 cut(s)	292
BstF5I	GGATG	5 cut(s)	90, 241, 349, 617, 1114
BstH2I	RGCGCY	2 cut(s)	111, 410
BstHHI	GCGC	2 cut(s)	110, 409
BstKTI	GATC	9 cut(s)	268, 431, 628, 997, 1056, 1128, 1144, 1315, 1372
BstMAI	GTCTC	1 cut(s)	592
BstMBI	GATC	9 cut(s)	265, 428, 625, 994, 1053, 1125, 1141, 1312, 1369
BstMCI	CGRYCG	1 cut(s)	1134
BstMWI	GCNNNNNNNGC	9 cut(s)	14, 154, 449, 458, 467, 920, 1007, 1742, 1745
BstNI	CCWGG	3 cut(s)	423, 482, 1300
BstNSI	RCATGY	3 cut(s)	324, 1085, 1712
BstPI	GGTNACC	1 cut(s)	292
BstSCI	CCNGG	3 cut(s)	421, 480, 1298
BstSFI	CTRYAG	2 cut(s)	402, 453
BstSLI	GKGCMC	1 cut(s)	562
BstV1I	GCAGC	8 cut(s)	157, 430, 648, 1097, 1562, 1729, 1732, 1748
BstV2I	GAAGAC	5 cut(s)	105, 799, 828, 878, 1172
BstX2I	RGATCY	5 cut(s)	428, 625, 994, 1053, 1141
BstYI	RGATCY	5 cut(s)	428, 625, 994, 1053, 1141
Bsu36I	CCTNAGG	1 cut(s)	630
BsuRI	GGCC	5 cut(s)	17, 53, 183, 1024, 1547
BtgI	CCRYGG	2 cut(s)	606, 1134
BtrI	CACGTC	1 cut(s)	205
BtsCI	GGATG	5 cut(s)	90, 241, 349, 617, 1114
BtsI	GCAGTG	1 cut(s)	1650
BtsIMutI	CAGTG	4 cut(s)	442, 570, 774, 1650
BveI	ACCTGC	2 cut(s)	76, 523
Cac8I	GCNNGC	7 cut(s)	15, 22, 150, 912, 1083, 1222, 1365
CaiI	CAGNNNCTG	1 cut(s)	1742
CciI	TCATGA	1 cut(s)	958
CfoI	GCGC	2 cut(s)	110, 409
Cfr10I	RCCGGY	2 cut(s)	148, 179
Cfr13I	GGNCC	2 cut(s)	1022, 1545
CsiI	ACCWGGT	1 cut(s)	421
Csp6I	GTAC	3 cut(s)	512, 1345, 1672
CspCI	CAANNNNNGTGG	2 cut(s)	307, 342
CviQI	GTAC	3 cut(s)	512, 1345, 1672
DdeI	CTNAG	5 cut(s)	630, 777, 1011, 1511, 1584
DinI	GGCGCC	1 cut(s)	109
DpnI	GATC	9 cut(s)	267, 430, 627, 996, 1055, 1127, 1143, 1314, 1371
DpnII	GATC	9 cut(s)	265, 428, 625, 994, 1053, 1125, 1141, 1312, 1369
DraI	TTTAAA	1 cut(s)	1699
DraIII	CACNNNGTG	1 cut(s)	425
EaeI	YGGCCR	1 cut(s)	51
Eam1104I	CTCTTC	1 cut(s)	1639
EarI	CTCTTC	1 cut(s)	1639
EciI	GGCGGA	1 cut(s)	144
Eco130I	CCWWGG	2 cut(s)	621, 1434
Eco57I	CTGAAG	4 cut(s)	101, 110, 990, 1446
Eco72I	CACGTG	1 cut(s)	655
Eco81I	CCTNAGG	1 cut(s)	630
Eco91I	GGTNACC	1 cut(s)	292
EcoO65I	GGTNACC	1 cut(s)	292
EcoRI	GAATTC	1 cut(s)	1184
EcoRII	CCWGG	3 cut(s)	421, 480, 1298
EcoT14I	CCWWGG	2 cut(s)	621, 1434
EcoT22I	ATGCAT	2 cut(s)	326, 679
EgeI	GGCGCC	1 cut(s)	109
EheI	GGCGCC	1 cut(s)	109
ErhI	CCWWGG	2 cut(s)	621, 1434
FokI	GGATG	5 cut(s)	77, 228, 356, 624, 1121
FspBI	CTAG	2 cut(s)	638, 1325
GlaI	GCGC	2 cut(s)	109, 408
GsaI	CCCAGC	1 cut(s)	41
GsuI	CTGGAG	2 cut(s)	387, 418
HaeII	RGCGCY	2 cut(s)	111, 410
HaeIII	GGCC	5 cut(s)	17, 53, 183, 1024, 1547
HapII	CCGG	4 cut(s)	54, 149, 180, 1028
HhaI	GCGC	2 cut(s)	110, 409
Hin1I	GRCGYC	1 cut(s)	108
Hin6I	GCGC	2 cut(s)	108, 407
HinP1I	GCGC	2 cut(s)	108, 407
HincII	GTYRAC	1 cut(s)	1093
HindII	GTYRAC	1 cut(s)	1093
HindIII	AAGCTT	3 cut(s)	122, 782, 847
HinfI	GANTC	8 cut(s)	57, 70, 234, 540, 1031, 1117, 1168, 1273
HpaII	CCGG	4 cut(s)	54, 149, 180, 1028
HphI	GGTGA	7 cut(s)	169, 178, 878, 991, 1135, 1322, 1399
Hpy166II	GTNNAC	2 cut(s)	1093, 1347
Hpy188III	TCNNGA	9 cut(s)	61, 245, 366, 599, 818, 959, 1129, 1559, 1715
Hpy8I	GTNNAC	2 cut(s)	1093, 1347
Hpy99I	CGWCG	1 cut(s)	206
HpyAV	CCTTC	7 cut(s)	121, 199, 302, 558, 1099, 1158, 1624
HpyCH4III	ACNGT	6 cut(s)	337, 496, 607, 927, 1135, 1538
HpyCH4IV	ACGT	2 cut(s)	204, 654
HpyF10VI	GCNNNNNNNGC	9 cut(s)	14, 154, 449, 458, 467, 920, 1007, 1742, 1745
HpyF3I	CTNAG	5 cut(s)	630, 777, 1011, 1511, 1584
HpySE526I	ACGT	2 cut(s)	204, 654
Hsp92I	GRCGYC	1 cut(s)	108
HspAI	GCGC	2 cut(s)	108, 407
KasI	GGCGCC	1 cut(s)	107
KroI	GCCGGC	1 cut(s)	148
KroNI	GCCGGC	1 cut(s)	150
Kzo9I	GATC	9 cut(s)	265, 428, 625, 994, 1053, 1125, 1141, 1312, 1369
LmnI	GCTCC	6 cut(s)	135, 157, 169, 314, 440, 1360
Lsp1109I	GCAGC	8 cut(s)	157, 430, 648, 1097, 1562, 1729, 1732, 1748
MabI	ACCWGGT	1 cut(s)	421
MaeI	CTAG	2 cut(s)	638, 1325
MaeII	ACGT	2 cut(s)	204, 654
MaeIII	GTNAC	6 cut(s)	226, 292, 650, 1243, 1375, 1538
MalI	GATC	9 cut(s)	267, 430, 627, 996, 1055, 1127, 1143, 1314, 1371
MboI	GATC	9 cut(s)	265, 428, 625, 994, 1053, 1125, 1141, 1312, 1369
MboII	GAAGA	9 cut(s)	110, 804, 833, 883, 923, 1177, 1656, 1703, 1763
MfeI	CAATTG	1 cut(s)	1686
MflI	RGATCY	5 cut(s)	428, 625, 994, 1053, 1141
MhlI	GDGCHC	1 cut(s)	562
Mly113I	GGCGCC	1 cut(s)	108
MlyI	GAGTC	3 cut(s)	64, 1040, 1162
MmeI	TCCRAC	2 cut(s)	225, 568
Mph1103I	ATGCAT	2 cut(s)	326, 679
MroNI	GCCGGC	1 cut(s)	148
MseI	TTAA	4 cut(s)	972, 1068, 1211, 1698
MslI	CAYNNNNRTG	1 cut(s)	1308
MspA1I	CMGCKG	2 cut(s)	1088, 1742
MspI	CCGG	4 cut(s)	54, 149, 180, 1028
MspR9I	CCNGG	3 cut(s)	423, 482, 1300
MunI	CAATTG	1 cut(s)	1686
MvaI	CCWGG	3 cut(s)	423, 482, 1300
MwoI	GCNNNNNNNGC	9 cut(s)	14, 154, 449, 458, 467, 920, 1007, 1742, 1745
NaeI	GCCGGC	1 cut(s)	150
NarI	GGCGCC	1 cut(s)	108
NdeII	GATC	9 cut(s)	265, 428, 625, 994, 1053, 1125, 1141, 1312, 1369
NgoMIV	GCCGGC	1 cut(s)	148
NlaIV	GGNNCC	7 cut(s)	109, 153, 316, 430, 627, 738, 996
NmuCI	GTSAC	3 cut(s)	226, 650, 1243
NsiI	ATGCAT	2 cut(s)	326, 679
NspI	RCATGY	3 cut(s)	324, 1085, 1712
NspV	TTCGAA	2 cut(s)	1151, 1642
PaeI	GCATGC	1 cut(s)	1085
PagI	TCATGA	1 cut(s)	958
PasI	CCCWGGG	1 cut(s)	481
PciI	ACATGT	1 cut(s)	1708
PcsI	WCGNNNNNNNCGW	2 cut(s)	111, 198
PdiI	GCCGGC	1 cut(s)	150
PfeI	GAWTC	5 cut(s)	57, 234, 540, 1117, 1273
PflMI	CCANNNNNTGG	1 cut(s)	27
PleI	GAGTC	3 cut(s)	64, 1039, 1162
PluTI	GGCGCC	1 cut(s)	111
PmaCI	CACGTG	1 cut(s)	655
PmlI	CACGTG	1 cut(s)	655
PpsI	GAGTC	3 cut(s)	64, 1039, 1162
Ppu21I	YACGTR	1 cut(s)	655
PscI	ACATGT	1 cut(s)	1708
PshBI	ATTAAT	1 cut(s)	972
Psp6I	CCWGG	3 cut(s)	421, 480, 1298
PspCI	CACGTG	1 cut(s)	655
PspEI	GGTNACC	1 cut(s)	292
PspFI	CCCAGC	1 cut(s)	37
PspGI	CCWGG	3 cut(s)	421, 480, 1298
PspN4I	GGNNCC	7 cut(s)	109, 153, 316, 430, 627, 738, 996
PspPI	GGNCC	2 cut(s)	1022, 1545
PstNI	CAGNNNCTG	1 cut(s)	1742
PsuI	RGATCY	5 cut(s)	428, 625, 994, 1053, 1141
PvuII	CAGCTG	1 cut(s)	1088
RsaI	GTAC	3 cut(s)	513, 1346, 1673
RsaNI	GTAC	3 cut(s)	512, 1345, 1672
RseI	CAYNNNNRTG	1 cut(s)	1308
SaqAI	TTAA	4 cut(s)	972, 1068, 1211, 1698
Sau3AI	GATC	9 cut(s)	265, 428, 625, 994, 1053, 1125, 1141, 1312, 1369
Sau96I	GGNCC	2 cut(s)	1022, 1545
SchI	GAGTC	3 cut(s)	64, 1040, 1162
ScrFI	CCNGG	3 cut(s)	423, 482, 1300
SduI	GDGCHC	1 cut(s)	562
SexAI	ACCWGGT	1 cut(s)	421
SfcI	CTRYAG	2 cut(s)	402, 453
SfoI	GGCGCC	1 cut(s)	109
SfuI	TTCGAA	2 cut(s)	1151, 1642
SmiMI	CAYNNNNRTG	1 cut(s)	1308
SmlI	CTYRAG	3 cut(s)	756, 850, 1578
SmoI	CTYRAG	3 cut(s)	756, 850, 1578
SphI	GCATGC	1 cut(s)	1085
SsiI	CCGC	8 cut(s)	18, 143, 155, 446, 458, 518, 1548, 1740
SspDI	GGCGCC	1 cut(s)	107
SspMI	CTAG	2 cut(s)	638, 1325
StyD4I	CCNGG	3 cut(s)	421, 480, 1298
StyI	CCWWGG	2 cut(s)	621, 1434
TaaI	ACNGT	6 cut(s)	337, 496, 607, 927, 1135, 1538
TaiI	ACGT	2 cut(s)	207, 657
TaqI	TCGA	3 cut(s)	1151, 1614, 1642
TaqII	GACCGA	1 cut(s)	227
TatI	WGTACW	1 cut(s)	1344
TauI	GCSGC	5 cut(s)	20, 461, 521, 1550, 1742
TfiI	GAWTC	5 cut(s)	57, 234, 540, 1117, 1273
Tru1I	TTAA	4 cut(s)	972, 1068, 1211, 1698
Tru9I	TTAA	4 cut(s)	972, 1068, 1211, 1698
TscAI	CASTG	4 cut(s)	442, 577, 781, 1657
TseFI	GTSAC	3 cut(s)	226, 650, 1243
TseI	GCWGC	8 cut(s)	145, 443, 661, 1085, 1550, 1736, 1742, 1745
Tsp45I	GTSAC	3 cut(s)	226, 650, 1243
TspDTI	ATGAA	7 cut(s)	360, 825, 851, 885, 1089, 1197, 1253
TspGWI	ACGGA	1 cut(s)	1178
TspRI	CASTG	4 cut(s)	442, 577, 781, 1657
Van91I	CCANNNNNTGG	1 cut(s)	27
VspI	ATTAAT	1 cut(s)	972
XapI	RAATTY	1 cut(s)	1184
XceI	RCATGY	3 cut(s)	324, 1085, 1712
XspI	CTAG	2 cut(s)	638, 1325
Zsp2I	ATGCAT	2 cut(s)	326, 679

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.