CUGBP Elav-like family member
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G03457 AT1G03457 AT1G03457 AT4G03110 AT4G03110 AT4G03110 |
| fragaria_vesca | FvH4_2g24620 FvH4_2g24620 FvH4_2g24620 |
| malus_domestica | MD03G1275000.v1.1 MD11G1297000.v1.1 |
| prunus_persica | Prupe.8G251600_v2.0.a1 Prupe.8G251600_v2.0.a1 Prupe.8G251600_v2.0.a1 Prupe.8G251600_v2.0.a1 |
| pyrus_communis | pycom03g21900 pycom11g26130 |
| rosa_chinensis | RchiOBHm_Chr6g0292451 |
| rosa_laevigata | RLG00000012023 |
| rosa_multiflora | Rmu_sc0001354.1_g000022 |
| rosa_roxburghii | Rroxscaffold_7G00175050 |
| rosa_rugosa | Rorug06G0226700 |
| rosa_samantha | Rh6AG340000 Rh6BG347300 Rh6CG354300 Rh6DG340100 |
| rosa_wichuraiana | Rw6G029600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1005 |
| AarI | CACCTGC | 1 cut(s) | 974 |
| AbsI | CCTCGAGG | 1 cut(s) | 156 |
| Acc36I | ACCTGC | 1 cut(s) | 974 |
| AccI | GTMKAC | 1 cut(s) | 1089 |
| AccII | CGCG | 1 cut(s) | 1040 |
| AciI | CCGC | 7 cut(s) | 5, 458, 602, 777, 814, 1040, 1191 |
| AclWI | GGATC | 3 cut(s) | 390, 593, 1035 |
| AcsI | RAATTY | 3 cut(s) | 101, 930, 1019 |
| AcuI | CTGAAG | 1 cut(s) | 363 |
| AdeI | CACNNNGTG | 1 cut(s) | 733 |
| AfaI | GTAC | 1 cut(s) | 440 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 656, 749 |
| AflII | CTTAAG | 1 cut(s) | 1214 |
| AflIII | ACRYGT | 1 cut(s) | 176 |
| AgsI | TTSAA | 5 cut(s) | 578, 863, 968, 1052, 1204 |
| AjnI | CCWGG | 3 cut(s) | 238, 676, 925 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 495, 527 |
| AluBI | AGCT | 7 cut(s) | 40, 82, 152, 467, 557, 1148, 1213 |
| AluI | AGCT | 7 cut(s) | 40, 82, 152, 467, 557, 1148, 1213 |
| Alw21I | GWGCWC | 2 cut(s) | 154, 300 |
| Alw26I | GTCTC | 5 cut(s) | 5, 337, 408, 592, 1215 |
| AlwI | GGATC | 3 cut(s) | 390, 593, 1035 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 791 |
| Ama87I | CYCGRG | 2 cut(s) | 156, 1014 |
| AoxI | GGCC | 2 cut(s) | 807, 1095 |
| ApeKI | GCWGC | 4 cut(s) | 464, 1145, 1148, 1237 |
| ApoI | RAATTY | 3 cut(s) | 101, 930, 1019 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 294, 326 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 41 |
| AspLEI | GCGC | 1 cut(s) | 1076 |
| AspS9I | GGNCC | 2 cut(s) | 808, 977 |
| AsuHPI | GGTGA | 4 cut(s) | 46, 217, 732, 915 |
| AvaI | CYCGRG | 2 cut(s) | 156, 1014 |
| AvaII | GGWCC | 1 cut(s) | 977 |
| BanII | GRGCYC | 1 cut(s) | 154 |
| BauI | CACGAG | 1 cut(s) | 147 |
| BbsI | GAAGAC | 5 cut(s) | 146, 236, 493, 568, 851 |
| Bbv12I | GWGCWC | 2 cut(s) | 154, 300 |
| BbvI | GCAGC | 4 cut(s) | 476, 1135, 1157, 1249 |
| BccI | CCATC | 3 cut(s) | 10, 116, 269 |
| BceAI | ACGGC | 3 cut(s) | 772, 846, 958 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1099, 1133 |
| BciT130I | CCWGG | 3 cut(s) | 240, 678, 927 |
| BclI | TGATCA | 1 cut(s) | 207 |
| BcoDI | GTCTC | 5 cut(s) | 5, 337, 408, 592, 1215 |
| BfaI | CTAG | 4 cut(s) | 249, 293, 414, 882 |
| BfmI | CTRYAG | 1 cut(s) | 386 |
| BfoI | RGCGCY | 1 cut(s) | 1077 |
| BfrI | CTTAAG | 1 cut(s) | 1214 |
| BfuAI | ACCTGC | 1 cut(s) | 974 |
| BisI | GCNGC | 5 cut(s) | 465, 1041, 1146, 1149, 1238 |
| BlsI | GCNGC | 5 cut(s) | 466, 1042, 1147, 1150, 1239 |
| Bme1390I | CCNGG | 3 cut(s) | 240, 678, 927 |
| Bme18I | GGWCC | 1 cut(s) | 977 |
| BmeT110I | CYCGRG | 2 cut(s) | 156, 1014 |
| BmgT120I | GGNCC | 2 cut(s) | 808, 977 |
| BmiI | GGNNCC | 3 cut(s) | 373, 775, 810 |
| BmrFI | CCNGG | 3 cut(s) | 240, 678, 927 |
| BmsI | GCATC | 2 cut(s) | 184, 254 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1227 |
| BpiI | GAAGAC | 5 cut(s) | 146, 236, 493, 568, 851 |
| BpmI | CTGGAG | 1 cut(s) | 574 |
| Bsa29I | ATCGAT | 1 cut(s) | 950 |
| BsaI | GGTCTC | 1 cut(s) | 408 |
| BsaJI | CCNNGG | 5 cut(s) | 239, 748, 853, 1013, 1077 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 136, 166, 495, 525 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 656, 749 |
| Bse1I | ACTGG | 2 cut(s) | 349, 1105 |
| Bse3DI | GCAATG | 2 cut(s) | 233, 764 |
| BseBI | CCWGG | 3 cut(s) | 240, 678, 927 |
| BseCI | ATCGAT | 1 cut(s) | 950 |
| BseDI | CCNNGG | 5 cut(s) | 239, 748, 853, 1013, 1077 |
| BseGI | GGATG | 2 cut(s) | 167, 894 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 656, 749 |
| BseMI | GCAATG | 2 cut(s) | 233, 764 |
| BseMII | CTCAG | 1 cut(s) | 1166 |
| BseNI | ACTGG | 2 cut(s) | 349, 1105 |
| BseRI | GAGGAG | 4 cut(s) | 23, 74, 144, 888 |
| BseXI | GCAGC | 4 cut(s) | 476, 1135, 1157, 1249 |
| Bsh1236I | CGCG | 1 cut(s) | 1040 |
| Bsh1285I | CGRYCG | 1 cut(s) | 462 |
| BshFI | GGCC | 2 cut(s) | 809, 1097 |
| BshVI | ATCGAT | 1 cut(s) | 950 |
| BsiEI | CGRYCG | 1 cut(s) | 462 |
| BsiHKAI | GWGCWC | 2 cut(s) | 154, 300 |
| BsiHKCI | CYCGRG | 2 cut(s) | 156, 1014 |
| BslFI | GGGAC | 1 cut(s) | 779 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 656, 749 |
| BsmAI | GTCTC | 5 cut(s) | 5, 337, 408, 592, 1215 |
| BsmBI | CGTCTC | 1 cut(s) | 5 |
| BsmFI | GGGAC | 1 cut(s) | 779 |
| BsnI | GGCC | 2 cut(s) | 809, 1097 |
| Bso31I | GGTCTC | 1 cut(s) | 408 |
| BsoBI | CYCGRG | 2 cut(s) | 156, 1014 |
| Bsp1286I | GDGCHC | 2 cut(s) | 154, 300 |
| Bsp143I | GATC | 4 cut(s) | 207, 382, 598, 1027 |
| Bsp19I | CCATGG | 1 cut(s) | 853 |
| BspACI | CCGC | 7 cut(s) | 5, 458, 602, 777, 814, 1040, 1191 |
| BspANI | GGCC | 2 cut(s) | 809, 1097 |
| BspCNI | CTCAG | 1 cut(s) | 1165 |
| BspDI | ATCGAT | 1 cut(s) | 950 |
| BspFNI | CGCG | 1 cut(s) | 1040 |
| BspLI | GGNNCC | 3 cut(s) | 373, 775, 810 |
| BspMI | ACCTGC | 1 cut(s) | 974 |
| BspPI | GGATC | 3 cut(s) | 390, 593, 1035 |
| BspTI | CTTAAG | 1 cut(s) | 1214 |
| BspTNI | GGTCTC | 1 cut(s) | 408 |
| BsrDI | GCAATG | 2 cut(s) | 233, 764 |
| BsrI | ACTGG | 2 cut(s) | 349, 1105 |
| BssECI | CCNNGG | 5 cut(s) | 239, 748, 853, 1013, 1077 |
| BssMI | GATC | 4 cut(s) | 207, 382, 598, 1027 |
| BssSI | CACGAG | 1 cut(s) | 147 |
| BssT1I | CCWWGG | 3 cut(s) | 748, 853, 1077 |
| Bst2BI | CACGAG | 1 cut(s) | 147 |
| Bst2UI | CCWGG | 3 cut(s) | 240, 678, 927 |
| Bst4CI | ACNGT | 5 cut(s) | 848, 919, 1178, 1229, 1274 |
| Bst6I | CTCTTC | 1 cut(s) | 21 |
| BstAFI | CTTAAG | 1 cut(s) | 1214 |
| BstDEI | CTNAG | 3 cut(s) | 395, 1070, 1152 |
| BstDSI | CCRYGG | 1 cut(s) | 853 |
| BstEII | GGTNACC | 1 cut(s) | 848 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 747 |
| BstF5I | GGATG | 2 cut(s) | 167, 894 |
| BstFNI | CGCG | 1 cut(s) | 1040 |
| BstH2I | RGCGCY | 1 cut(s) | 1077 |
| BstHHI | GCGC | 1 cut(s) | 1076 |
| BstKTI | GATC | 4 cut(s) | 210, 385, 601, 1030 |
| BstMAI | GTCTC | 5 cut(s) | 5, 337, 408, 592, 1215 |
| BstMBI | GATC | 4 cut(s) | 207, 382, 598, 1027 |
| BstMCI | CGRYCG | 1 cut(s) | 462 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 464, 473, 1157, 1188 |
| BstNI | CCWGG | 3 cut(s) | 240, 678, 927 |
| BstNSI | RCATGY | 3 cut(s) | 180, 697, 722 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1227 |
| BstPI | GGTNACC | 1 cut(s) | 848 |
| BstSCI | CCNGG | 3 cut(s) | 238, 676, 925 |
| BstSFI | CTRYAG | 1 cut(s) | 386 |
| BstUI | CGCG | 1 cut(s) | 1040 |
| BstV1I | GCAGC | 4 cut(s) | 476, 1135, 1157, 1249 |
| BstV2I | GAAGAC | 5 cut(s) | 146, 236, 493, 568, 851 |
| BstX2I | RGATCY | 1 cut(s) | 382 |
| BstYI | RGATCY | 1 cut(s) | 382 |
| Bsu15I | ATCGAT | 1 cut(s) | 950 |
| BsuRI | GGCC | 2 cut(s) | 809, 1097 |
| BsuTUI | ATCGAT | 1 cut(s) | 950 |
| BtgI | CCRYGG | 1 cut(s) | 853 |
| BtsCI | GGATG | 2 cut(s) | 167, 894 |
| BtsIMutI | CAGTG | 1 cut(s) | 1098 |
| BveI | ACCTGC | 1 cut(s) | 974 |
| CaiI | CAGNNNCTG | 1 cut(s) | 791 |
| CfoI | GCGC | 1 cut(s) | 1076 |
| Cfr13I | GGNCC | 2 cut(s) | 808, 977 |
| ClaI | ATCGAT | 1 cut(s) | 950 |
| Csp6I | GTAC | 1 cut(s) | 439 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 786, 821 |
| CviAII | CATG | 8 cut(s) | 67, 177, 584, 616, 671, 694, 719, 854 |
| CviQI | GTAC | 1 cut(s) | 439 |
| DdeI | CTNAG | 3 cut(s) | 395, 1070, 1152 |
| DpnI | GATC | 4 cut(s) | 209, 384, 600, 1029 |
| DpnII | GATC | 4 cut(s) | 207, 382, 598, 1027 |
| DraIII | CACNNNGTG | 1 cut(s) | 733 |
| Eam1104I | CTCTTC | 1 cut(s) | 21 |
| EarI | CTCTTC | 1 cut(s) | 21 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Ecl136II | GAGCTC | 1 cut(s) | 152 |
| Eco130I | CCWWGG | 3 cut(s) | 748, 853, 1077 |
| Eco24I | GRGCYC | 1 cut(s) | 154 |
| Eco31I | GGTCTC | 1 cut(s) | 408 |
| Eco47I | GGWCC | 1 cut(s) | 977 |
| Eco53kI | GAGCTC | 1 cut(s) | 152 |
| Eco57I | CTGAAG | 1 cut(s) | 363 |
| Eco88I | CYCGRG | 2 cut(s) | 156, 1014 |
| Eco91I | GGTNACC | 1 cut(s) | 848 |
| EcoICRI | GAGCTC | 1 cut(s) | 152 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 747 |
| EcoO65I | GGTNACC | 1 cut(s) | 848 |
| EcoRI | GAATTC | 2 cut(s) | 101, 1019 |
| EcoRII | CCWGG | 3 cut(s) | 238, 676, 925 |
| EcoT14I | CCWWGG | 3 cut(s) | 748, 853, 1077 |
| EcoT22I | ATGCAT | 1 cut(s) | 724 |
| EcoT38I | GRGCYC | 1 cut(s) | 154 |
| ErhI | CCWWGG | 3 cut(s) | 748, 853, 1077 |
| Esp3I | CGTCTC | 1 cut(s) | 5 |
| FaeI | CATG | 8 cut(s) | 70, 180, 587, 619, 674, 697, 722, 857 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1197, 1229 |
| FaqI | GGGAC | 1 cut(s) | 779 |
| FatI | CATG | 8 cut(s) | 66, 176, 583, 615, 670, 693, 718, 853 |
| FauI | CCCGC | 1 cut(s) | 821 |
| FbaI | TGATCA | 1 cut(s) | 207 |
| FblI | GTMKAC | 1 cut(s) | 1089 |
| Fnu4HI | GCNGC | 5 cut(s) | 465, 1041, 1146, 1149, 1238 |
| FokI | GGATG | 2 cut(s) | 174, 901 |
| FriOI | GRGCYC | 1 cut(s) | 154 |
| Fsp4HI | GCNGC | 5 cut(s) | 465, 1041, 1146, 1149, 1238 |
| FspBI | CTAG | 4 cut(s) | 249, 293, 414, 882 |
| GlaI | GCGC | 1 cut(s) | 1075 |
| GluI | GCNGC | 5 cut(s) | 465, 1041, 1146, 1149, 1238 |
| GsuI | CTGGAG | 1 cut(s) | 574 |
| HaeII | RGCGCY | 1 cut(s) | 1077 |
| HaeIII | GGCC | 2 cut(s) | 809, 1097 |
| HhaI | GCGC | 1 cut(s) | 1076 |
| Hin1II | CATG | 8 cut(s) | 70, 180, 587, 619, 674, 697, 722, 857 |
| Hin6I | GCGC | 1 cut(s) | 1074 |
| HinP1I | GCGC | 1 cut(s) | 1074 |
| HincII | GTYRAC | 2 cut(s) | 124, 1232 |
| HindII | GTYRAC | 2 cut(s) | 124, 1232 |
| HinfI | GANTC | 9 cut(s) | 76, 391, 443, 594, 712, 788, 991, 1122, 1136 |
| HphI | GGTGA | 4 cut(s) | 46, 217, 732, 915 |
| Hpy166II | GTNNAC | 3 cut(s) | 124, 1090, 1232 |
| Hpy188I | TCNGA | 7 cut(s) | 50, 60, 174, 337, 364, 1121, 1155 |
| Hpy188III | TCNNGA | 5 cut(s) | 98, 591, 709, 1016, 1031 |
| Hpy8I | GTNNAC | 3 cut(s) | 124, 1090, 1232 |
| Hpy99I | CGWCG | 2 cut(s) | 50, 314 |
| HpyAV | CCTTC | 3 cut(s) | 914, 966, 968 |
| HpyCH4III | ACNGT | 5 cut(s) | 848, 919, 1178, 1229, 1274 |
| HpyCH4IV | ACGT | 2 cut(s) | 802, 1046 |
| HpyCH4V | TGCA | 4 cut(s) | 259, 272, 722, 769 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 464, 473, 1157, 1188 |
| HpyF3I | CTNAG | 3 cut(s) | 395, 1070, 1152 |
| HpySE526I | ACGT | 2 cut(s) | 802, 1046 |
| Hsp92II | CATG | 8 cut(s) | 70, 180, 587, 619, 674, 697, 722, 857 |
| HspAI | GCGC | 1 cut(s) | 1074 |
| Ksp22I | TGATCA | 1 cut(s) | 207 |
| Kzo9I | GATC | 4 cut(s) | 207, 382, 598, 1027 |
| LmnI | GCTCC | 4 cut(s) | 87, 157, 503, 623 |
| Lsp1109I | GCAGC | 4 cut(s) | 476, 1135, 1157, 1249 |
| LweI | GCATC | 2 cut(s) | 184, 254 |
| MaeI | CTAG | 4 cut(s) | 249, 293, 414, 882 |
| MaeII | ACGT | 2 cut(s) | 802, 1046 |
| MaeIII | GTNAC | 2 cut(s) | 752, 848 |
| MalI | GATC | 4 cut(s) | 209, 384, 600, 1029 |
| MboI | GATC | 4 cut(s) | 207, 382, 598, 1027 |
| MboII | GAAGA | 7 cut(s) | 38, 151, 203, 241, 498, 573, 851 |
| MflI | RGATCY | 1 cut(s) | 382 |
| MhlI | GDGCHC | 2 cut(s) | 154, 300 |
| MluCI | AATT | 6 cut(s) | 101, 841, 930, 1019, 1184, 1199 |
| MlyI | GAGTC | 5 cut(s) | 452, 588, 706, 797, 1130 |
| MmeI | TCCRAC | 2 cut(s) | 28, 264 |
| Mph1103I | ATGCAT | 1 cut(s) | 724 |
| MroXI | GAANNNNTTC | 1 cut(s) | 41 |
| MseI | TTAA | 9 cut(s) | 132, 264, 378, 525, 1164, 1187, 1215, 1269, 1280 |
| MspA1I | CMGCKG | 1 cut(s) | 1148 |
| MspCI | CTTAAG | 1 cut(s) | 1214 |
| MspR9I | CCNGG | 3 cut(s) | 240, 678, 927 |
| MvaI | CCWGG | 3 cut(s) | 240, 678, 927 |
| MvnI | CGCG | 1 cut(s) | 1040 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 464, 473, 1157, 1188 |
| NcoI | CCATGG | 1 cut(s) | 853 |
| NdeII | GATC | 4 cut(s) | 207, 382, 598, 1027 |
| NlaIII | CATG | 8 cut(s) | 70, 180, 587, 619, 674, 697, 722, 857 |
| NlaIV | GGNNCC | 3 cut(s) | 373, 775, 810 |
| NsiI | ATGCAT | 1 cut(s) | 724 |
| NspI | RCATGY | 3 cut(s) | 180, 697, 722 |
| PaeR7I | CTCGAG | 1 cut(s) | 156 |
| PaqCI | CACCTGC | 1 cut(s) | 974 |
| PciI | ACATGT | 1 cut(s) | 176 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 154 |
| PdmI | GAANNNNTTC | 1 cut(s) | 41 |
| PfeI | GAWTC | 4 cut(s) | 76, 391, 991, 1122 |
| PflFI | GACNNNGTC | 1 cut(s) | 787 |
| PkrI | GCNGC | 5 cut(s) | 466, 1042, 1147, 1150, 1239 |
| PleI | GAGTC | 5 cut(s) | 451, 588, 706, 796, 1130 |
| PpsI | GAGTC | 5 cut(s) | 451, 588, 706, 796, 1130 |
| PscI | ACATGT | 1 cut(s) | 176 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1227 |
| PsiI | TTATAA | 1 cut(s) | 1005 |
| Psp124BI | GAGCTC | 1 cut(s) | 154 |
| Psp6I | CCWGG | 3 cut(s) | 238, 676, 925 |
| PspEI | GGTNACC | 1 cut(s) | 848 |
| PspGI | CCWGG | 3 cut(s) | 238, 676, 925 |
| PspN4I | GGNNCC | 3 cut(s) | 373, 775, 810 |
| PspPI | GGNCC | 2 cut(s) | 808, 977 |
| PspXI | VCTCGAGB | 1 cut(s) | 156 |
| PstNI | CAGNNNCTG | 1 cut(s) | 791 |
| PsuI | RGATCY | 1 cut(s) | 382 |
| PsyI | GACNNNGTC | 1 cut(s) | 787 |
| PvuII | CAGCTG | 1 cut(s) | 1148 |
| RsaI | GTAC | 1 cut(s) | 440 |
| RsaNI | GTAC | 1 cut(s) | 439 |
| SacI | GAGCTC | 1 cut(s) | 154 |
| SaqAI | TTAA | 9 cut(s) | 132, 264, 378, 525, 1164, 1187, 1215, 1269, 1280 |
| SatI | GCNGC | 5 cut(s) | 465, 1041, 1146, 1149, 1238 |
| Sau3AI | GATC | 4 cut(s) | 207, 382, 598, 1027 |
| Sau96I | GGNCC | 2 cut(s) | 808, 977 |
| SchI | GAGTC | 5 cut(s) | 452, 588, 706, 797, 1130 |
| ScrFI | CCNGG | 3 cut(s) | 240, 678, 927 |
| SduI | GDGCHC | 2 cut(s) | 154, 300 |
| SfaNI | GCATC | 2 cut(s) | 184, 254 |
| SfcI | CTRYAG | 1 cut(s) | 386 |
| Sfr274I | CTCGAG | 1 cut(s) | 156 |
| SinI | GGWCC | 1 cut(s) | 977 |
| SlaI | CTCGAG | 1 cut(s) | 156 |
| SmlI | CTYRAG | 2 cut(s) | 156, 1214 |
| SmoI | CTYRAG | 2 cut(s) | 156, 1214 |
| Sse9I | AATT | 6 cut(s) | 101, 841, 930, 1019, 1184, 1199 |
| SsiI | CCGC | 7 cut(s) | 5, 458, 602, 777, 814, 1040, 1191 |
| SspMI | CTAG | 4 cut(s) | 249, 293, 414, 882 |
| SstI | GAGCTC | 1 cut(s) | 154 |
| StyD4I | CCNGG | 3 cut(s) | 238, 676, 925 |
| StyI | CCWWGG | 3 cut(s) | 748, 853, 1077 |
| TaaI | ACNGT | 5 cut(s) | 848, 919, 1178, 1229, 1274 |
| TaiI | ACGT | 2 cut(s) | 805, 1049 |
| TaqI | TCGA | 6 cut(s) | 97, 157, 559, 597, 950, 1023 |
| TasI | AATT | 6 cut(s) | 101, 841, 930, 1019, 1184, 1199 |
| TauI | GCSGC | 1 cut(s) | 1043 |
| TfiI | GAWTC | 4 cut(s) | 76, 391, 991, 1122 |
| Tru1I | TTAA | 9 cut(s) | 132, 264, 378, 525, 1164, 1187, 1215, 1269, 1280 |
| Tru9I | TTAA | 9 cut(s) | 132, 264, 378, 525, 1164, 1187, 1215, 1269, 1280 |
| TscAI | CASTG | 1 cut(s) | 1105 |
| TseI | GCWGC | 4 cut(s) | 464, 1145, 1148, 1237 |
| TspDTI | ATGAA | 4 cut(s) | 132, 209, 1114, 1187 |
| TspGWI | ACGGA | 4 cut(s) | 86, 243, 384, 498 |
| TspRI | CASTG | 1 cut(s) | 1105 |
| Tth111I | GACNNNGTC | 1 cut(s) | 787 |
| Vha464I | CTTAAG | 1 cut(s) | 1214 |
| VpaK11BI | GGWCC | 1 cut(s) | 977 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 747 |
| XapI | RAATTY | 3 cut(s) | 101, 930, 1019 |
| XceI | RCATGY | 3 cut(s) | 180, 697, 722 |
| XhoI | CTCGAG | 1 cut(s) | 156 |
| XmiI | GTMKAC | 1 cut(s) | 1089 |
| XmnI | GAANNNNTTC | 1 cut(s) | 41 |
| XspI | CTAG | 4 cut(s) | 249, 293, 414, 882 |
| Zsp2I | ATGCAT | 1 cut(s) | 724 |