Prupe.8G251600_v2.0.a1

CUGBP Elav-like family member

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
21617490 .. 21622865
5376 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G251600.3

Sequence Viewer

Length: 1299 bp
ATGGCGGAGGGGAAGAAAGAGAGAAAGTTGAACAGCGAAGACAGCGTGAAGCTGTTTGTCGGTCAAGTGCCGAAGCACTTGACCGAAGCTCAACTCCTCGCAATGTTCAAAGAGTTCGCTCTAGTAGACGAAGTCAACATCATCAAGGACAAGACGACGCGCGCTTCCAGAGGATGTTGCTTTGTGATATGTCCGTCGAGGCAGGAGGCAGATAAAGCGGTCGATGCGTGTCATAATAAGAAGACTTTGCCCGGGGCATCTAGTCCGTTGCAAGTGAAGTATGCTGATGGCGAGTTGGAAAGACTAGAACACAAGCTCTTTGTTGGTATGCTTCCAAAGAATGTTTCCGAAGTTGAAGTTTCTACTCTTTTCTCTAAATATGGAACAGTAAAGGACCTGCAGATATTAAGAGGTTCTCAGCAAACGAGCAAAGGCTGTGCATTCTTAAAGTATGAGACAAAAGAACAAGCTCTTTCTGCCCTGGAAGCCATGAATGGAAAGTATAAAATGGAGGGTTCAAGTGTTCCTTTAGTTGTCAAGTGGGCAGACACAGAAAAAGAAAGGCTAGCTCGGAGAGCTCAGAAAGCTCATTCCCAGGCTGCTAATGTGCCAAATGCTGATTCACAACATCCTTCGTTATTTGGAGCCTTACCTATGGGCTATGTTCCTTCATATAATGGTTATGGTTATCAGGCTCCTGGGGCATATGGACTTATGCAATACCGCCTACCTGGACTGCCGAACCAACCAGGTTTCCATAATATGATACGCCCTGTAAACCAAGGAAATGCTTTGCATGGTATCAGGCCTCGCAATATCGCCCCCAGAAATTTTGCTATGCCTCCTGCAAGTTATGTGGGCTCTGCTTATCCTGCAGTTCCAGGTCTTCAGCATCCGATGATGTATCCTGGAGGAATGATGAGTCACCGGCCATTGAGTTCACCTGGTTCATTGTCACCTACAGTCGTGAACAGTAACCCAGCAACATCCTCAGGCACGAGTAGAAGTTCTGGGGGTCAGGTTGAAGGTCCACCTGGTGCTAATTTATTTATCTATCACATACCTCAAGAATTTGGAGATCAAGAGCTTGCCAATGCTTTTCAAGCATTTGGTAGGGTTTTGAGTGCCAAGGTTTTTGTTGATAAAGCAACCGGCGTCAGCAAATGTTTTGGATTTGTAAGTTATGATTTACCAGAGTCTGCTCAATCTGCTATCAGTGTGATGAATGGATACCAATTAGGTGGTAAGAAATTAAAGGTTCAGCTTAAGAGAGACAACAAACAGAACAAACCATATTGA

Protein Analysis

433

Amino Acids

47.02

Weight (kDa)

9.43

Isoelectric Point (pI)

44.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 405
AccI GTMKAC 1 cut(s) 126
AccII CGCG 2 cut(s) 160, 162
AciI CCGC 3 cut(s) 5, 218, 724
AcoI YGGCCR 1 cut(s) 929
AcsI RAATTY 2 cut(s) 829, 1070
AcuI CTGAAG 1 cut(s) 872
AcyI GRCGYC 1 cut(s) 1155
AdeI CACNNNGTG 1 cut(s) 1037
AflII CTTAAG 1 cut(s) 1265
AgsI TTSAA 6 cut(s) 31, 109, 356, 519, 1025, 1103
AjnI CCWGG 9 cut(s) 480, 594, 697, 730, 748, 880, 907, 943, 1033
AjuI GAANNNNNNNTTGG 4 cut(s) 328, 360, 604, 636
AluBI AGCT 9 cut(s) 52, 89, 316, 470, 569, 578, 587, 1087, 1264
AluI AGCT 9 cut(s) 52, 89, 316, 470, 569, 578, 587, 1087, 1264
Alw21I GWGCWC 1 cut(s) 580
Alw26I GTCTC 2 cut(s) 449, 1266
AlwNI CAGNNNCTG 1 cut(s) 1199
Ama87I CYCGRG 1 cut(s) 251
AoxI GGCC 2 cut(s) 806, 929
ApeKI GCWGC 1 cut(s) 599
ApoI RAATTY 2 cut(s) 829, 1070
AspLEI GCGC 2 cut(s) 162, 164
AspS9I GGNCC 2 cut(s) 394, 1028
AsuC2I CCSGG 2 cut(s) 252, 253
AsuHPI GGTGA 3 cut(s) 917, 933, 948
AsuNHI GCTAGC 1 cut(s) 565
AvaI CYCGRG 1 cut(s) 251
AvaII GGWCC 2 cut(s) 394, 1028
AxyI CCTNAGG 1 cut(s) 991
BanII GRGCYC 2 cut(s) 580, 863
BauI CACGAG 1 cut(s) 997
BbsI GAAGAC 3 cut(s) 45, 248, 878
Bbv12I GWGCWC 1 cut(s) 580
BbvI GCAGC 1 cut(s) 586
BccI CCATC 1 cut(s) 281
BciT130I CCWGG 9 cut(s) 482, 596, 699, 732, 750, 882, 909, 945, 1035
BciVI GTATCC 2 cut(s) 915, 1223
BcnI CCSGG 2 cut(s) 252, 253
BcoDI GTCTC 2 cut(s) 449, 1266
BfaI CTAG 4 cut(s) 122, 261, 305, 566
BfmI CTRYAG 3 cut(s) 398, 873, 960
BfrI CTTAAG 1 cut(s) 1265
BfuAI ACCTGC 1 cut(s) 405
BfuI GTATCC 2 cut(s) 915, 1223
BisI GCNGC 1 cut(s) 600
BlsI GCNGC 1 cut(s) 601
Bme18I GGWCC 2 cut(s) 394, 1028
BmeT110I CYCGRG 1 cut(s) 251
BmgT120I GGNCC 2 cut(s) 394, 1028
BmiI GGNNCC 2 cut(s) 646, 696
BmsI GCATC 3 cut(s) 214, 266, 901
BmtI GCTAGC 1 cut(s) 569
BpiI GAAGAC 3 cut(s) 45, 248, 878
BpmI CTGGAG 1 cut(s) 930
BpuEI CTTGAG 1 cut(s) 1050
BpuMI CCSGG 2 cut(s) 252, 253
BsaHI GRCGYC 1 cut(s) 1155
BsaJI CCNNGG 7 cut(s) 251, 252, 480, 594, 698, 781, 1128
Bse118I RCCGGY 2 cut(s) 927, 1151
Bse21I CCTNAGG 1 cut(s) 991
Bse3DI GCAATG 1 cut(s) 108
BseBI CCWGG 9 cut(s) 482, 596, 699, 732, 750, 882, 909, 945, 1035
BseDI CCNNGG 7 cut(s) 251, 252, 480, 594, 698, 781, 1128
BseGI GGATG 4 cut(s) 179, 628, 892, 986
BseMI GCAATG 1 cut(s) 108
BseMII CTCAG 3 cut(s) 431, 593, 1005
BsePI GCGCGC 1 cut(s) 160
BseRI GAGGAG 1 cut(s) 86
BseXI GCAGC 1 cut(s) 586
BseYI CCCAGC 1 cut(s) 979
Bsh1236I CGCG 2 cut(s) 160, 162
Bsh1285I CGRYCG 1 cut(s) 222
BshFI GGCC 2 cut(s) 808, 931
BsiEI CGRYCG 1 cut(s) 222
BsiHKAI GWGCWC 1 cut(s) 580
BsiHKCI CYCGRG 1 cut(s) 251
BsiSI CCGG 3 cut(s) 252, 928, 1152
BsmAI GTCTC 2 cut(s) 449, 1266
BsmI GAATGC 1 cut(s) 440
BsnI GGCC 2 cut(s) 808, 931
BsoBI CYCGRG 1 cut(s) 251
Bsp1286I GDGCHC 2 cut(s) 580, 863
Bsp143I GATC 1 cut(s) 1078
BspACI CCGC 3 cut(s) 5, 218, 724
BspANI GGCC 2 cut(s) 808, 931
BspCNI CTCAG 3 cut(s) 430, 592, 1004
BspFNI CGCG 2 cut(s) 160, 162
BspLI GGNNCC 2 cut(s) 646, 696
BspMAI CTGCAG 2 cut(s) 402, 877
BspMI ACCTGC 1 cut(s) 405
BspOI GCTAGC 1 cut(s) 569
BspTI CTTAAG 1 cut(s) 1265
BsrDI GCAATG 1 cut(s) 108
BsrFI RCCGGY 2 cut(s) 927, 1151
BssAI RCCGGY 2 cut(s) 927, 1151
BssECI CCNNGG 7 cut(s) 251, 252, 480, 594, 698, 781, 1128
BssHII GCGCGC 1 cut(s) 160
BssMI GATC 1 cut(s) 1078
BssNI GRCGYC 1 cut(s) 1155
BssSI CACGAG 1 cut(s) 997
BssT1I CCWWGG 2 cut(s) 781, 1128
Bst2BI CACGAG 1 cut(s) 997
Bst2UI CCWGG 9 cut(s) 482, 596, 699, 732, 750, 882, 909, 945, 1035
Bst4CI ACNGT 3 cut(s) 388, 964, 974
BstACI GRCGYC 1 cut(s) 1155
BstAFI CTTAAG 1 cut(s) 1265
BstC8I GCNNGC 3 cut(s) 162, 567, 1089
BstDEI CTNAG 3 cut(s) 417, 579, 991
BstF5I GGATG 4 cut(s) 179, 628, 892, 986
BstFNI CGCG 2 cut(s) 160, 162
BstHHI GCGC 2 cut(s) 162, 164
BstKTI GATC 1 cut(s) 1081
BstMAI GTCTC 2 cut(s) 449, 1266
BstMBI GATC 1 cut(s) 1078
BstMCI CGRYCG 1 cut(s) 222
BstNI CCWGG 9 cut(s) 482, 596, 699, 732, 750, 882, 909, 945, 1035
BstSFI CTRYAG 3 cut(s) 398, 873, 960
BstUI CGCG 2 cut(s) 160, 162
BstV1I GCAGC 1 cut(s) 586
BstV2I GAAGAC 3 cut(s) 45, 248, 878
BstXI CCANNNNNNTGG 1 cut(s) 1241
Bsu36I CCTNAGG 1 cut(s) 991
BsuI GTATCC 2 cut(s) 915, 1223
BsuRI GGCC 2 cut(s) 808, 931
BtsCI GGATG 4 cut(s) 179, 628, 892, 986
BtsIMutI CAGTG 1 cut(s) 1222
BveI ACCTGC 1 cut(s) 405
Cac8I GCNNGC 3 cut(s) 162, 567, 1089
CaiI CAGNNNCTG 1 cut(s) 1199
CfoI GCGC 2 cut(s) 162, 164
Cfr10I RCCGGY 2 cut(s) 927, 1151
Cfr13I GGNCC 2 cut(s) 394, 1028
Cfr9I CCCGGG 1 cut(s) 251
CseI GACGC 2 cut(s) 166, 1144
CsiI ACCWGGT 3 cut(s) 748, 943, 1033
CspCI CAANNNNNGTGG 2 cut(s) 837, 872
CviAII CATG 2 cut(s) 490, 797
DdeI CTNAG 3 cut(s) 417, 579, 991
DpnI GATC 1 cut(s) 1080
DpnII GATC 1 cut(s) 1078
DraIII CACNNNGTG 1 cut(s) 1037
EaeI YGGCCR 1 cut(s) 929
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 578
Eco130I CCWWGG 2 cut(s) 781, 1128
Eco147I AGGCCT 1 cut(s) 808
Eco24I GRGCYC 2 cut(s) 580, 863
Eco47I GGWCC 2 cut(s) 394, 1028
Eco53kI GAGCTC 1 cut(s) 578
Eco57I CTGAAG 1 cut(s) 872
Eco81I CCTNAGG 1 cut(s) 991
Eco88I CYCGRG 1 cut(s) 251
EcoICRI GAGCTC 1 cut(s) 578
EcoO109I RGGNCCY 1 cut(s) 394
EcoRII CCWGG 9 cut(s) 480, 594, 697, 730, 748, 880, 907, 943, 1033
EcoT14I CCWWGG 2 cut(s) 781, 1128
EcoT38I GRGCYC 2 cut(s) 580, 863
ErhI CCWWGG 2 cut(s) 781, 1128
FaeI CATG 2 cut(s) 493, 800
FalI AAGNNNNNCTT 2 cut(s) 511, 543
FatI CATG 2 cut(s) 489, 796
FauNDI CATATG 1 cut(s) 706
FblI GTMKAC 1 cut(s) 126
Fnu4HI GCNGC 1 cut(s) 600
FokI GGATG 4 cut(s) 186, 615, 879, 973
FriOI GRGCYC 2 cut(s) 580, 863
Fsp4HI GCNGC 1 cut(s) 600
FspBI CTAG 4 cut(s) 122, 261, 305, 566
GlaI GCGC 2 cut(s) 161, 163
GluI GCNGC 1 cut(s) 600
GsaI CCCAGC 1 cut(s) 983
GsuI CTGGAG 1 cut(s) 930
HaeIII GGCC 2 cut(s) 808, 931
HapII CCGG 3 cut(s) 252, 928, 1152
HgaI GACGC 2 cut(s) 166, 1144
HhaI GCGC 2 cut(s) 162, 164
Hin1I GRCGYC 1 cut(s) 1155
Hin1II CATG 2 cut(s) 493, 800
Hin6I GCGC 2 cut(s) 160, 162
HinP1I GCGC 2 cut(s) 160, 162
HincII GTYRAC 1 cut(s) 136
HindII GTYRAC 1 cut(s) 136
HinfI GANTC 3 cut(s) 620, 922, 1196
HpaII CCGG 3 cut(s) 252, 928, 1152
HphI GGTGA 3 cut(s) 917, 933, 948
Hpy166II GTNNAC 6 cut(s) 127, 136, 778, 941, 970, 1031
Hpy188I TCNGA 4 cut(s) 349, 573, 582, 897
Hpy188III TCNNGA 4 cut(s) 168, 967, 1067, 1082
Hpy8I GTNNAC 6 cut(s) 127, 136, 778, 941, 970, 1031
Hpy99I CGWCG 2 cut(s) 160, 199
HpyAV CCTTC 3 cut(s) 642, 678, 1019
HpyCH4III ACNGT 3 cut(s) 388, 964, 974
HpyCH4V TGCA 7 cut(s) 271, 400, 440, 718, 796, 848, 875
HpyF3I CTNAG 3 cut(s) 417, 579, 991
Hsp92I GRCGYC 1 cut(s) 1155
Hsp92II CATG 2 cut(s) 493, 800
HspAI GCGC 2 cut(s) 160, 162
Kzo9I GATC 1 cut(s) 1078
LmnI GCTCC 2 cut(s) 644, 700
Lsp1109I GCAGC 1 cut(s) 586
LweI GCATC 3 cut(s) 214, 266, 901
MabI ACCWGGT 3 cut(s) 748, 943, 1033
MaeI CTAG 4 cut(s) 122, 261, 305, 566
MaeIII GTNAC 3 cut(s) 923, 954, 974
MalI GATC 1 cut(s) 1080
MboI GATC 1 cut(s) 1078
MboII GAAGA 4 cut(s) 25, 50, 253, 878
MhlI GDGCHC 2 cut(s) 580, 863
MluCI AATT 5 cut(s) 829, 1042, 1070, 1235, 1250
MlyI GAGTC 2 cut(s) 931, 1205
MmeI TCCRAC 1 cut(s) 276
MseI TTAA 4 cut(s) 407, 446, 1253, 1266
MspCI CTTAAG 1 cut(s) 1265
MspI CCGG 3 cut(s) 252, 928, 1152
Mva1269I GAATGC 1 cut(s) 440
MvaI CCWGG 9 cut(s) 482, 596, 699, 732, 750, 882, 909, 945, 1035
MvnI CGCG 2 cut(s) 160, 162
NciI CCSGG 2 cut(s) 252, 253
NdeI CATATG 1 cut(s) 706
NdeII GATC 1 cut(s) 1078
NheI GCTAGC 1 cut(s) 565
NlaIII CATG 2 cut(s) 493, 800
NlaIV GGNNCC 2 cut(s) 646, 696
NmuCI GTSAC 2 cut(s) 923, 954
PauI GCGCGC 1 cut(s) 160
PceI AGGCCT 1 cut(s) 808
PctI GAATGC 1 cut(s) 440
PfeI GAWTC 1 cut(s) 620
PflFI GACNNNGTC 1 cut(s) 131
PfoI TCCNGGA 1 cut(s) 907
PkrI GCNGC 1 cut(s) 601
PleI GAGTC 2 cut(s) 930, 1204
PpsI GAGTC 2 cut(s) 930, 1204
PpuMI RGGWCCY 1 cut(s) 394
Psp124BI GAGCTC 1 cut(s) 580
Psp5II RGGWCCY 1 cut(s) 394
Psp6I CCWGG 9 cut(s) 480, 594, 697, 730, 748, 880, 907, 943, 1033
PspFI CCCAGC 1 cut(s) 979
PspGI CCWGG 9 cut(s) 480, 594, 697, 730, 748, 880, 907, 943, 1033
PspN4I GGNNCC 2 cut(s) 646, 696
PspPI GGNCC 2 cut(s) 394, 1028
PspPPI RGGWCCY 1 cut(s) 394
PstI CTGCAG 2 cut(s) 402, 877
PstNI CAGNNNCTG 1 cut(s) 1199
PsyI GACNNNGTC 1 cut(s) 131
PteI GCGCGC 1 cut(s) 160
SacI GAGCTC 1 cut(s) 580
SaqAI TTAA 4 cut(s) 407, 446, 1253, 1266
SatI GCNGC 1 cut(s) 600
Sau3AI GATC 1 cut(s) 1078
Sau96I GGNCC 2 cut(s) 394, 1028
SchI GAGTC 2 cut(s) 931, 1205
SduI GDGCHC 2 cut(s) 580, 863
SexAI ACCWGGT 3 cut(s) 748, 943, 1033
SfaNI GCATC 3 cut(s) 214, 266, 901
SfcI CTRYAG 3 cut(s) 398, 873, 960
SinI GGWCC 2 cut(s) 394, 1028
SmaI CCCGGG 1 cut(s) 253
SmlI CTYRAG 2 cut(s) 1065, 1265
SmoI CTYRAG 2 cut(s) 1065, 1265
Sse9I AATT 5 cut(s) 829, 1042, 1070, 1235, 1250
SseBI AGGCCT 1 cut(s) 808
SsiI CCGC 3 cut(s) 5, 218, 724
SspMI CTAG 4 cut(s) 122, 261, 305, 566
SstI GAGCTC 1 cut(s) 580
StuI AGGCCT 1 cut(s) 808
StyI CCWWGG 2 cut(s) 781, 1128
TaaI ACNGT 3 cut(s) 388, 964, 974
TaqI TCGA 2 cut(s) 197, 222
TaqII GACCGA 2 cut(s) 50, 98
TasI AATT 5 cut(s) 829, 1042, 1070, 1235, 1250
TfiI GAWTC 1 cut(s) 620
Tru1I TTAA 4 cut(s) 407, 446, 1253, 1266
Tru9I TTAA 4 cut(s) 407, 446, 1253, 1266
TscAI CASTG 1 cut(s) 1222
TseFI GTSAC 2 cut(s) 923, 954
TseI GCWGC 1 cut(s) 599
Tsp45I GTSAC 2 cut(s) 923, 954
TspDTI ATGAA 4 cut(s) 506, 660, 939, 1238
TspGWI ACGGA 2 cut(s) 183, 255
TspMI CCCGGG 1 cut(s) 251
TspRI CASTG 1 cut(s) 1222
Tth111I GACNNNGTC 1 cut(s) 131
Vha464I CTTAAG 1 cut(s) 1265
VpaK11BI GGWCC 2 cut(s) 394, 1028
XapI RAATTY 2 cut(s) 829, 1070
XmaI CCCGGG 1 cut(s) 251
XmiI GTMKAC 1 cut(s) 126
XspI CTAG 4 cut(s) 122, 261, 305, 566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.