Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005281

Physical Location & Seq

Genomic Coordinates Forward (+)

36417202 .. 36420406

Gene Structure 3205 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0226700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2655 bp

ATGGCCATGGCTTCAGCTGCAATAGACCTTTTGCTTGGGAAAATAGTGTCATTTCTTGACGACCAATTGTCACTGTTAGGAGGAGTTCATGATGAACTTGAAGAAATCAAGCGCGAGCTTATAGTCATGAAAGCCTTCTTGGAGGATGCAGAAAGAAAGGGTGTTCTCAGTGAAGTGGAGAAAACATGGGTGGCGAATGTGAGGGACGTATCCGTAGACGTTGAAGACTTCATTGACGAGTTCACCTACCACATCAACAAGCAGAGAAGTTGGAGTCCATTTACAAGAACGCTTCGTAAATCCCTTCGCTTCCCTAAGAATCTTTGGGAGAGGCATCGGATTGCCACAAAGTTGCAGAAGATCATCAAAATTATCAAAGCCATTCCAGAGAGAAGCCTACGGTACGGAGTTAAACGTATAGAAGGTGTTTCTTATAATTCCCACTACCATCCTGATCGGCTGATAATCTCAAGGGAGTCATCTCTTTTCCTTCAAGATGATGAAGTGGTGGGAATTATAGATGCTAAAGAGAAGTTGGTCACAATGTTGTTGTCTTCACAAGCTCAAAGAACTGTGATTTCTGTTGTTGGAATGGGTGGCTCTGGTAAGACTACCTTGGTTGCAAAGACCTTCAATGGCCAGACTGTAAAGCAACATTTCGATTGCTGTGCGTGGATTACTGTCTCGCAAACGTACACGGTTGAAGATCTACTCAGAGTCATCATGAAGGAGCTTCTCCGAGCAGTGAAGGAGCAGATTCCAGTAGACTTGAGCGACATGAGCTATTCACATTTGGTGGAAATGCTGGCCAGCTATTTGAAGGAAAAGAGGTACTTGATTGTCTTAGATGATGTGTGGGATATCAATCTTTGGAGAAAAATAAGTGCGGCACTTCCAGATGGACCACATGGAAGCCGGGTCATGCTTACAACTCGTAAAGAAGACATTGCTTCTTTTCCATTTGGGGTTGGAAGTTATGTCCACTATGTTCAGCCTCTAAACAAGAGTGAGGCGTGGCATCTTTTTTCCATGAAAGCTTTCTTCAGTTATCCTAATAGCTGTTGTCCAACTGAGCTCGAACATATAGCTAGAGATCTTGTTGACAAATGTGAAGGCTTACCTCTAGGAATTGTTGCTTTGGGCGCTCTCATGTCAACCAAAAGTGTTCTGTCCGAGTGGATGAAGGTTTACAGCAGCTTGAACTGGGAGCTATGCAACAACCCTACGCTTGAAGTGGTGAAGAGCATCTTACTGTTGAGCTTCAATGATTTACCATATCGGCTAAAGCATTGCTTCCTATATTGTTGTGTTTTCCCCGAAGATTATGTGATCCAGTGTAGAAGGCTTATTAGACTGTGGATAGCGGAGGGGTTTGTGGAACAAGTTAGAGGTGCTAAGACAGAAGAGATAGCTGAGAGCTACATGGCGGAGCTCACGTGTCGATGCATGCTTCAAGTAGTTGAGAGGGAACCATCTGGGAGGGCAGAAACATTTAGGATGCATGATCTTCTGCGAGAACTCTGCATTTCAATTTCAGAAGCTGAGACATTTTGTACCATATACAATGACCAAGAACCAGCTAAAGAGAGCAAGGCTCGCCGCGTGTCAATGCAAGCGAATTCTCGAGCACTAAGAAATCCGAAAGACATTTCGAAGTTGCCAGATGACATAGTGAACTGCTTCAATTTGATGTATTTAAATTTGAGAAGCACAAAAGTTAAAGAGCTTCCCAAAGACATAGGGAAACTCATCAACTTAGAAATGCTAAACATAAGCAATTCGAAAATTAGATTGCTTCCGGTTGGGACTTTGAAGTTACAGAAGCTACACCATCTCTTGATGTTGCACTTTAATGATCAAAAGTTGTGTTCTTTTGATTGTCTTGACGGCCGCACGCAAGCTCCGCCGGGCATTTGTAAGCTAAAGAGCTTACAAGTTCTGGATACAGTCAAGGTGGAAGGCGAGTTGATCGAACAACTTCAGTCCATGACGCAACTCACAAGACTAGGCTTAGCAAATGTGAGGGAAGCTGATGAAAAAGATCTATGCAAGGCGATCAAAAACATGAAACTCATTGAGCAGTTGAATGTCATGACAACCGATGAGGATGAGGTGTTGCGCATGGACGCATTAGCGGAGGGTCCTCCAATGCTCAACACACTTTTCCTAACTGGAAAGTTAGAGAGGCTTCCACTTTGGTTCCATTCTCTTCATAGCCTTTCGTACTTGACTTTGCACTGGTCTAGAGTAACACATGATTTTCTTCCTTGCATCCAAGAGCTGCCAAATTTGACAAAGCTGTGGTTGAGTAATGCATATATAGGAGACGAGTTAGTCTTTCGCAATGGATTCCGAAAGCTCACCGAGTTGTTACTGCTCAACTTTTCTCAGTTGTCTGTGATCATCATAGAGAAGGGAGTGATGCCGGCATTAAAGACACTGGATATATGGGAATGCATGCAGTTGAAGCAAATTCCTCGGGGCATTGAACATCTCACAAATCTCAAACAATTGACTCTGTTAGGTGTTCCCAATGAGCTGATTGAGTGCATACGAGGAGAAGGAAGCATGGATAACTCAAAGGTTAAGCAGATTCCCAACATTGGTTATTGCTACAAAACTAGGTTTGGGTGGTCTCATGGTAGAACGCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PBD RhoGAP

Protein Analysis

884

Amino Acids

101.31

Weight (kDa)

7.72

Isoelectric Point (pI)

40.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	8 - 93	3.9e-24	Rx N-terminal domain
NB-ARC	PF00931	176 - 347	3.6e-46	NB-ARC domain
WHD_DRP	PF23559	437 - 507	6.4e-22	Disease resistance protein Winged helix domain
LRR_14	PF23598	556 - 839	5.9e-37	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005281)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03100
fragaria_vesca	FvH4_2g24600 FvH4_2g24611
malus_domestica	MD03G1274800.v1.1 MD03G1274900.v1.1 MD11G1296900.v1.1
prunus_persica	Prupe.8G251200_v2.0.a1 Prupe.8G251400_v2.0.a1
pyrus_communis	pycom03g21890 pycom11g26120
rosa_chinensis	RchiOBHm_Chr6g0292421 RchiOBHm_Chr6g0292441
rosa_laevigata	RLG00000012024 RLG00000012026
rosa_multiflora	Rmu_sc0001354.1_g000021 Rmu_sc0012226.1_g000005 Rmu_sc0021303.1_g000001
rosa_roxburghii	Rroxscaffold_7G00175060 Rroxscaffold_7G00175080
rosa_rugosa	Rorug06G0226500 Rorug06G0226700
rosa_samantha	Rh6AG339800 Rh6BG347000 Rh6BG347200 Rh6CG353900 Rh6CG354100 Rh6DG339800
rosa_wichuraiana	Rw6G029570 Rw6G029590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	435
AasI	GACNNNNNNGTC	1 cut(s)	2333
Acc16I	TGCGCA	1 cut(s)	2120
AccI	GTMKAC	2 cut(s)	216, 765
AccII	CGCG	3 cut(s)	114, 1602, 2650
AciI	CCGC	7 cut(s)	887, 1364, 1427, 1600, 1891, 1904, 2135
AclWI	GGATC	1 cut(s)	1324
AcoI	YGGCCR	4 cut(s)	3, 637, 807, 1888
AcsI	RAATTY	4 cut(s)	1618, 1699, 2287, 2472
AcuI	CTGAAG	2 cut(s)	1027, 1964
AcvI	CACGTG	1 cut(s)	1437
AfaI	GTAC	5 cut(s)	404, 695, 833, 1555, 2225
AfiI	CCNNNNNNNGG	1 cut(s)	2603
AflIII	ACRYGT	1 cut(s)	1436
AhdI	GACNNNNNGTC	1 cut(s)	67
AjuI	GAANNNNNNNTTGG	2 cut(s)	122, 154
Alw21I	GWGCWC	3 cut(s)	1077, 1434, 1630
Alw26I	GTCTC	4 cut(s)	688, 1538, 2319, 2640
AlwI	GGATC	1 cut(s)	1324
AlwNI	CAGNNNCTG	1 cut(s)	1541
Ama87I	CYCGRG	2 cut(s)	1623, 2478
AoxI	GGCC	4 cut(s)	3, 637, 807, 1888
ApeKI	GCWGC	3 cut(s)	17, 1194, 2281
ApoI	RAATTY	4 cut(s)	1618, 1699, 2287, 2472
Asp700I	GAANNNNTTC	4 cut(s)	134, 1037, 1679, 1977
AspLEI	GCGC	3 cut(s)	114, 1145, 2121
AspS9I	GGNCC	2 cut(s)	902, 2141
AsuC2I	CCSGG	2 cut(s)	917, 1908
AsuHPI	GGTGA	3 cut(s)	235, 1249, 2353
AsuII	TTCGAA	2 cut(s)	1652, 1781
AvaI	CYCGRG	2 cut(s)	1623, 2478
AvaII	GGWCC	2 cut(s)	902, 2141
BalI	TGGCCA	3 cut(s)	5, 639, 809
BanII	GRGCYC	2 cut(s)	1077, 1434
BbrPI	CACGTG	1 cut(s)	1437
BbsI	GAAGAC	3 cut(s)	231, 546, 948
Bbv12I	GWGCWC	3 cut(s)	1077, 1434, 1630
BbvI	GCAGC	3 cut(s)	4, 1206, 2268
BccI	CCATC	4 cut(s)	456, 893, 1480, 1839
BceAI	ACGGC	1 cut(s)	1903
BcgI	CGANNNNNNTGC	6 cut(s)	650, 684, 1503, 1537, 2459, 2493
BciVI	GTATCC	2 cut(s)	220, 1936
BclI	TGATCA	2 cut(s)	1855, 2400
BcnI	CCSGG	2 cut(s)	917, 1908
BcoDI	GTCTC	4 cut(s)	688, 1538, 2319, 2640
BfaI	CTAG	5 cut(s)	1089, 1124, 2006, 2244, 2622
BfoI	RGCGCY	1 cut(s)	1146
BfuI	GTATCC	2 cut(s)	220, 1936
BglII	AGATCT	3 cut(s)	706, 1093, 2041
BisI	GCNGC	6 cut(s)	18, 888, 1195, 1600, 1891, 2282
BlpI	GCTNAGC	1 cut(s)	2011
BlsI	GCNGC	6 cut(s)	19, 889, 1196, 1601, 1892, 2283
Bme1390I	CCNGG	2 cut(s)	917, 1908
Bme18I	GGWCC	2 cut(s)	902, 2141
BmeRI	GACNNNNNGTC	1 cut(s)	67
BmeT110I	CYCGRG	2 cut(s)	1623, 2478
BmgT120I	GGNCC	2 cut(s)	902, 2141
BmiI	GGNNCC	3 cut(s)	1470, 2142, 2201
BmrFI	CCNGG	2 cut(s)	917, 1908
BmrI	ACTGGG	1 cut(s)	1213
BmsI	GCATC	9 cut(s)	136, 343, 511, 1027, 1254, 1433, 1488, 2280, 2412
BmuI	ACTGGG	1 cut(s)	1213
BpiI	GAAGAC	3 cut(s)	231, 546, 948
BplI	GAGNNNNNCTC	2 cut(s)	1579, 1611
Bpu1102I	GCTNAGC	1 cut(s)	2011
Bpu14I	TTCGAA	2 cut(s)	1652, 1781
BpuEI	CTTGAG	2 cut(s)	454, 790
BpuMI	CCSGG	2 cut(s)	917, 1908
BsaAI	YACGTR	1 cut(s)	1437
BsaBI	GATNNNNATC	1 cut(s)	864
BsaI	GGTCTC	1 cut(s)	2640
BsaJI	CCNNGG	3 cut(s)	6, 615, 2477
BsaWI	WCCGGW	1 cut(s)	1798
BsaXI	ACNNNNNCTCC	4 cut(s)	1421, 1451, 1885, 1915
Bsc4I	CCNNNNNNNGG	1 cut(s)	2603
Bse118I	RCCGGY	1 cut(s)	2425
Bse1I	ACTGG	6 cut(s)	761, 1208, 1333, 2176, 2243, 2445
Bse3DI	GCAATG	3 cut(s)	945, 1288, 2350
Bse8I	GATNNNNATC	1 cut(s)	864
BseDI	CCNNGG	3 cut(s)	6, 615, 2477
BseGI	GGATG	6 cut(s)	151, 448, 1185, 1503, 2113, 2271
BseJI	GATNNNNATC	1 cut(s)	864
BseLI	CCNNNNNNNGG	1 cut(s)	2603
BseMI	GCAATG	3 cut(s)	945, 1288, 2350
BseMII	CTCAG	6 cut(s)	181, 727, 1062, 1404, 1533, 2402
BseNI	ACTGG	6 cut(s)	761, 1208, 1333, 2176, 2243, 2445
BseRI	GAGGAG	2 cut(s)	96, 2571
BseX3I	CGGCCG	1 cut(s)	1888
BseXI	GCAGC	3 cut(s)	4, 1206, 2268
Bsh1236I	CGCG	3 cut(s)	114, 1602, 2650
Bsh1285I	CGRYCG	1 cut(s)	1891
BshFI	GGCC	4 cut(s)	5, 639, 809, 1890
BsiEI	CGRYCG	1 cut(s)	1891
BsiHKAI	GWGCWC	3 cut(s)	1077, 1434, 1630
BsiHKCI	CYCGRG	2 cut(s)	1623, 2478
BsiSI	CCGG	4 cut(s)	916, 1799, 1907, 2426
BslFI	GGGAC	2 cut(s)	218, 1819
BslI	CCNNNNNNNGG	1 cut(s)	2603
BsmAI	GTCTC	4 cut(s)	688, 1538, 2319, 2640
BsmBI	CGTCTC	1 cut(s)	2319
BsmFI	GGGAC	2 cut(s)	218, 1819
BsmI	GAATGC	1 cut(s)	2459
BsnI	GGCC	4 cut(s)	5, 639, 809, 1890
Bso31I	GGTCTC	1 cut(s)	2640
BsoBI	CYCGRG	2 cut(s)	1623, 2478
Bsp119I	TTCGAA	2 cut(s)	1652, 1781
Bsp1286I	GDGCHC	3 cut(s)	1077, 1434, 1630
Bsp1720I	GCTNAGC	1 cut(s)	2011
Bsp19I	CCATGG	1 cut(s)	6
BspACI	CCGC	7 cut(s)	887, 1364, 1427, 1600, 1891, 1904, 2135
BspANI	GGCC	4 cut(s)	5, 639, 809, 1890
BspCNI	CTCAG	6 cut(s)	180, 726, 1063, 1405, 1534, 2401
BspFNI	CGCG	3 cut(s)	114, 1602, 2650
BspHI	TCATGA	4 cut(s)	88, 126, 723, 2091
BspLI	GGNNCC	3 cut(s)	1470, 2142, 2201
BspPI	GGATC	1 cut(s)	1324
BspQI	GCTCTTC	1 cut(s)	1235
BspT104I	TTCGAA	2 cut(s)	1652, 1781
BspTNI	GGTCTC	1 cut(s)	2640
BsrDI	GCAATG	3 cut(s)	945, 1288, 2350
BsrFI	RCCGGY	1 cut(s)	2425
BsrI	ACTGG	6 cut(s)	761, 1208, 1333, 2176, 2243, 2445
BssAI	RCCGGY	1 cut(s)	2425
BssECI	CCNNGG	3 cut(s)	6, 615, 2477
BssT1I	CCWWGG	2 cut(s)	6, 615
Bst4CI	ACNGT	9 cut(s)	75, 402, 574, 646, 682, 700, 1254, 1356, 1948
Bst6I	CTCTTC	3 cut(s)	1235, 1398, 2214
BstBAI	YACGTR	1 cut(s)	1437
BstBI	TTCGAA	2 cut(s)	1652, 1781
BstDSI	CCRYGG	1 cut(s)	6
BstF5I	GGATG	6 cut(s)	151, 448, 1185, 1503, 2113, 2271
BstFNI	CGCG	3 cut(s)	114, 1602, 2650
BstH2I	RGCGCY	1 cut(s)	1146
BstHHI	GCGC	3 cut(s)	114, 1145, 2121
BstMAI	GTCTC	4 cut(s)	688, 1538, 2319, 2640
BstMCI	CGRYCG	1 cut(s)	1891
BstMWI	GCNNNNNNNGC	6 cut(s)	17, 780, 1142, 1596, 1903, 2467
BstNSI	RCATGY	2 cut(s)	1450, 2461
BstSCI	CCNGG	2 cut(s)	915, 1906
BstUI	CGCG	3 cut(s)	114, 1602, 2650
BstV1I	GCAGC	3 cut(s)	4, 1206, 2268
BstV2I	GAAGAC	3 cut(s)	231, 546, 948
BstX2I	RGATCY	3 cut(s)	706, 1093, 2041
BstYI	RGATCY	3 cut(s)	706, 1093, 2041
BstZI	CGGCCG	1 cut(s)	1888
BsuI	GTATCC	2 cut(s)	220, 1936
BsuRI	GGCC	4 cut(s)	5, 639, 809, 1890
BtgI	CCRYGG	1 cut(s)	6
BtsCI	GGATG	6 cut(s)	151, 448, 1185, 1503, 2113, 2271
BtsI	GCAGTG	1 cut(s)	750
BtsIMutI	CAGTG	6 cut(s)	71, 175, 750, 1340, 2236, 2438
CaiI	CAGNNNCTG	1 cut(s)	1541
CciI	TCATGA	4 cut(s)	88, 126, 723, 2091
CfoI	GCGC	3 cut(s)	114, 1145, 2121
Cfr10I	RCCGGY	1 cut(s)	2425
Cfr13I	GGNCC	2 cut(s)	902, 2141
CseI	GACGC	2 cut(s)	1999, 2135
Csp6I	GTAC	5 cut(s)	403, 694, 832, 1554, 2224
CviQI	GTAC	5 cut(s)	403, 694, 832, 1554, 2224
DraI	TTTAAA	1 cut(s)	1698
DrdI	GACNNNNNNGTC	1 cut(s)	2333
DriI	GACNNNNNGTC	1 cut(s)	67
DseDI	GACNNNNNNGTC	1 cut(s)	2333
EaeI	YGGCCR	4 cut(s)	3, 637, 807, 1888
EagI	CGGCCG	1 cut(s)	1888
Eam1104I	CTCTTC	3 cut(s)	1235, 1398, 2214
Eam1105I	GACNNNNNGTC	1 cut(s)	67
EarI	CTCTTC	3 cut(s)	1235, 1398, 2214
EciI	GGCGGA	2 cut(s)	1442, 1893
Ecl136II	GAGCTC	2 cut(s)	1075, 1432
EclXI	CGGCCG	1 cut(s)	1888
Eco130I	CCWWGG	2 cut(s)	6, 615
Eco24I	GRGCYC	2 cut(s)	1077, 1434
Eco31I	GGTCTC	1 cut(s)	2640
Eco32I	GATATC	1 cut(s)	862
Eco47I	GGWCC	2 cut(s)	902, 2141
Eco52I	CGGCCG	1 cut(s)	1888
Eco53kI	GAGCTC	2 cut(s)	1075, 1432
Eco57I	CTGAAG	2 cut(s)	1027, 1964
Eco72I	CACGTG	1 cut(s)	1437
Eco88I	CYCGRG	2 cut(s)	1623, 2478
EcoICRI	GAGCTC	2 cut(s)	1075, 1432
EcoO109I	RGGNCCY	1 cut(s)	2141
EcoRI	GAATTC	1 cut(s)	1618
EcoRV	GATATC	1 cut(s)	862
EcoT14I	CCWWGG	2 cut(s)	6, 615
EcoT22I	ATGCAT	4 cut(s)	1448, 1503, 2317, 2459
EcoT38I	GRGCYC	2 cut(s)	1077, 1434
ErhI	CCWWGG	2 cut(s)	6, 615
Esp3I	CGTCTC	1 cut(s)	2319
FalI	AAGNNNNNCTT	8 cut(s)	599, 631, 818, 850, 1232, 1264, 1277, 1309
FaqI	GGGAC	2 cut(s)	218, 1819
FbaI	TGATCA	2 cut(s)	1855, 2400
FblI	GTMKAC	2 cut(s)	216, 765
Fnu4HI	GCNGC	6 cut(s)	18, 888, 1195, 1600, 1891, 2282
FokI	GGATG	6 cut(s)	158, 435, 1192, 1510, 2120, 2258
FriOI	GRGCYC	2 cut(s)	1077, 1434
Fsp4HI	GCNGC	6 cut(s)	18, 888, 1195, 1600, 1891, 2282
FspBI	CTAG	5 cut(s)	1089, 1124, 2006, 2244, 2622
FspI	TGCGCA	1 cut(s)	2120
GlaI	GCGC	3 cut(s)	113, 1144, 2120
GluI	GCNGC	6 cut(s)	18, 888, 1195, 1600, 1891, 2282
HaeII	RGCGCY	1 cut(s)	1146
HaeIII	GGCC	4 cut(s)	5, 639, 809, 1890
HapII	CCGG	4 cut(s)	916, 1799, 1907, 2426
HgaI	GACGC	2 cut(s)	1999, 2135
HhaI	GCGC	3 cut(s)	114, 1145, 2121
Hin6I	GCGC	3 cut(s)	112, 1143, 2119
HinP1I	GCGC	3 cut(s)	112, 1143, 2119
HincII	GTYRAC	2 cut(s)	1102, 1155
HindII	GTYRAC	2 cut(s)	1102, 1155
HindIII	AAGCTT	1 cut(s)	1035
HinfI	GANTC	8 cut(s)	274, 319, 476, 717, 757, 2349, 2515, 2593
HpaII	CCGG	4 cut(s)	916, 1799, 1907, 2426
HphI	GGTGA	3 cut(s)	235, 1249, 2353
Hpy166II	GTNNAC	9 cut(s)	217, 243, 696, 766, 982, 1102, 1155, 1189, 1675
Hpy188I	TCNGA	7 cut(s)	339, 716, 740, 1174, 1537, 1641, 2354
Hpy8I	GTNNAC	9 cut(s)	217, 243, 696, 766, 982, 1102, 1155, 1189, 1675
HpyCH4III	ACNGT	9 cut(s)	75, 402, 574, 646, 682, 700, 1254, 1356, 1948
HpyCH4IV	ACGT	5 cut(s)	207, 219, 415, 692, 1436
HpyF10VI	GCNNNNNNNGC	6 cut(s)	17, 780, 1142, 1596, 1903, 2467
HpySE526I	ACGT	5 cut(s)	207, 219, 415, 692, 1436
HspAI	GCGC	3 cut(s)	112, 1143, 2119
KroI	GCCGGC	1 cut(s)	2425
KroNI	GCCGGC	1 cut(s)	2427
Ksp22I	TGATCA	2 cut(s)	1855, 2400
LguI	GCTCTTC	1 cut(s)	1235
LmnI	GCTCC	5 cut(s)	730, 751, 1207, 1429, 1906
Lsp1109I	GCAGC	3 cut(s)	4, 1206, 2268
LweI	GCATC	9 cut(s)	136, 343, 511, 1027, 1254, 1433, 1488, 2280, 2412
MaeI	CTAG	5 cut(s)	1089, 1124, 2006, 2244, 2622
MaeII	ACGT	5 cut(s)	207, 219, 415, 692, 1436
MaeIII	GTNAC	5 cut(s)	69, 538, 1815, 2248, 2370
MfeI	CAATTG	2 cut(s)	65, 2510
MflI	RGATCY	3 cut(s)	706, 1093, 2041
MhlI	GDGCHC	3 cut(s)	1077, 1434, 1630
MlsI	TGGCCA	3 cut(s)	5, 639, 809
MluNI	TGGCCA	3 cut(s)	5, 639, 809
MlyI	GAGTC	4 cut(s)	283, 485, 726, 2509
MmeI	TCCRAC	4 cut(s)	251, 568, 949, 1091
Mox20I	TGGCCA	3 cut(s)	5, 639, 809
Mph1103I	ATGCAT	4 cut(s)	1448, 1503, 2317, 2459
MroNI	GCCGGC	1 cut(s)	2425
MroXI	GAANNNNTTC	4 cut(s)	134, 1037, 1679, 1977
MscI	TGGCCA	3 cut(s)	5, 639, 809
MseI	TTAA	6 cut(s)	411, 1697, 1719, 1851, 2432, 2586
MslI	CAYNNNNRTG	1 cut(s)	1851
Msp20I	TGGCCA	3 cut(s)	5, 639, 809
MspA1I	CMGCKG	1 cut(s)	17
MspI	CCGG	4 cut(s)	916, 1799, 1907, 2426
MspR9I	CCNGG	2 cut(s)	917, 1908
MunI	CAATTG	2 cut(s)	65, 2510
Mva1269I	GAATGC	1 cut(s)	2459
MvnI	CGCG	3 cut(s)	114, 1602, 2650
MwoI	GCNNNNNNNGC	6 cut(s)	17, 780, 1142, 1596, 1903, 2467
NaeI	GCCGGC	1 cut(s)	2427
NciI	CCSGG	2 cut(s)	917, 1908
NcoI	CCATGG	1 cut(s)	6
NgoMIV	GCCGGC	1 cut(s)	2425
NlaIV	GGNNCC	3 cut(s)	1470, 2142, 2201
NmuCI	GTSAC	2 cut(s)	69, 538
NsbI	TGCGCA	1 cut(s)	2120
NsiI	ATGCAT	4 cut(s)	1448, 1503, 2317, 2459
NspI	RCATGY	2 cut(s)	1450, 2461
NspV	TTCGAA	2 cut(s)	1652, 1781
PaeI	GCATGC	2 cut(s)	1450, 2461
PaeR7I	CTCGAG	1 cut(s)	1623
PagI	TCATGA	4 cut(s)	88, 126, 723, 2091
PciSI	GCTCTTC	1 cut(s)	1235
PctI	GAATGC	1 cut(s)	2459
PdiI	GCCGGC	1 cut(s)	2427
PdmI	GAANNNNTTC	4 cut(s)	134, 1037, 1679, 1977
PfeI	GAWTC	4 cut(s)	319, 757, 2349, 2593
PkrI	GCNGC	6 cut(s)	19, 889, 1196, 1601, 1892, 2283
PleI	GAGTC	4 cut(s)	282, 484, 725, 2509
PmaCI	CACGTG	1 cut(s)	1437
PmlI	CACGTG	1 cut(s)	1437
PpsI	GAGTC	4 cut(s)	282, 484, 725, 2509
Ppu21I	YACGTR	1 cut(s)	1437
PpuMI	RGGWCCY	1 cut(s)	2141
PsiI	TTATAA	1 cut(s)	435
Psp124BI	GAGCTC	2 cut(s)	1077, 1434
Psp5II	RGGWCCY	1 cut(s)	2141
PspCI	CACGTG	1 cut(s)	1437
PspN4I	GGNNCC	3 cut(s)	1470, 2142, 2201
PspPI	GGNCC	2 cut(s)	902, 2141
PspPPI	RGGWCCY	1 cut(s)	2141
PstNI	CAGNNNCTG	1 cut(s)	1541
PsuI	RGATCY	3 cut(s)	706, 1093, 2041
PvuII	CAGCTG	1 cut(s)	17
RsaI	GTAC	5 cut(s)	404, 695, 833, 1555, 2225
RsaNI	GTAC	5 cut(s)	403, 694, 832, 1554, 2224
RseI	CAYNNNNRTG	1 cut(s)	1851
SacI	GAGCTC	2 cut(s)	1077, 1434
SapI	GCTCTTC	1 cut(s)	1235
SaqAI	TTAA	6 cut(s)	411, 1697, 1719, 1851, 2432, 2586
SatI	GCNGC	6 cut(s)	18, 888, 1195, 1600, 1891, 2282
Sau96I	GGNCC	2 cut(s)	902, 2141
SchI	GAGTC	4 cut(s)	283, 485, 726, 2509
ScrFI	CCNGG	2 cut(s)	917, 1908
SduI	GDGCHC	3 cut(s)	1077, 1434, 1630
SfaNI	GCATC	9 cut(s)	136, 343, 511, 1027, 1254, 1433, 1488, 2280, 2412
Sfr274I	CTCGAG	1 cut(s)	1623
SfuI	TTCGAA	2 cut(s)	1652, 1781
SinI	GGWCC	2 cut(s)	902, 2141
SlaI	CTCGAG	1 cut(s)	1623
SmiI	ATTTAAAT	1 cut(s)	1698
SmiMI	CAYNNNNRTG	1 cut(s)	1851
SmlI	CTYRAG	3 cut(s)	469, 769, 1623
SmoI	CTYRAG	3 cut(s)	469, 769, 1623
SphI	GCATGC	2 cut(s)	1450, 2461
SsiI	CCGC	7 cut(s)	887, 1364, 1427, 1600, 1891, 1904, 2135
SspMI	CTAG	5 cut(s)	1089, 1124, 2006, 2244, 2622
SstI	GAGCTC	2 cut(s)	1077, 1434
StyD4I	CCNGG	2 cut(s)	915, 1906
StyI	CCWWGG	2 cut(s)	6, 615
SwaI	ATTTAAAT	1 cut(s)	1698
TaaI	ACNGT	9 cut(s)	75, 402, 574, 646, 682, 700, 1254, 1356, 1948
TaiI	ACGT	5 cut(s)	210, 222, 418, 695, 1439
TaqI	TCGA	7 cut(s)	660, 1077, 1441, 1624, 1652, 1781, 1971
TauI	GCSGC	3 cut(s)	890, 1602, 1893
TfiI	GAWTC	4 cut(s)	319, 757, 2349, 2593
Tru1I	TTAA	6 cut(s)	411, 1697, 1719, 1851, 2432, 2586
Tru9I	TTAA	6 cut(s)	411, 1697, 1719, 1851, 2432, 2586
TscAI	CASTG	6 cut(s)	78, 175, 750, 1340, 2243, 2445
TseFI	GTSAC	2 cut(s)	69, 538
TseI	GCWGC	3 cut(s)	17, 1194, 2281
Tsp45I	GTSAC	2 cut(s)	69, 538
TspGWI	ACGGA	2 cut(s)	202, 420
TspRI	CASTG	6 cut(s)	78, 175, 750, 1340, 2243, 2445
VpaK11BI	GGWCC	2 cut(s)	902, 2141
XapI	RAATTY	4 cut(s)	1618, 1699, 2287, 2472
XbaI	TCTAGA	1 cut(s)	2243
XceI	RCATGY	2 cut(s)	1450, 2461
XhoI	CTCGAG	1 cut(s)	1623
XmiI	GTMKAC	2 cut(s)	216, 765
XmnI	GAANNNNTTC	4 cut(s)	134, 1037, 1679, 1977
XspI	CTAG	5 cut(s)	1089, 1124, 2006, 2244, 2622
Zsp2I	ATGCAT	4 cut(s)	1448, 1503, 2317, 2459

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.