Prupe.8G251200_v2.0.a1

rho GTPase-activating protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
21605397 .. 21607847
2451 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G251200.1

Sequence Viewer

Length: 1296 bp
ATGACAGGGCTTGTAATGGTGACAAGGGGAGGTGGGTGTGGTGGTGGTAATGGGAAAGGAACTAAAGGAACTAACAAGAGCTCAGAGGAAGAGCAAAACCAGATTTCTCTGGTAGCCCTTCTCTTAGCTGCTGTAAGGAAATCCATGGTGGCCTGCCGTGTTGAACAAGGTGAAGAAGTCATCTCCACCGTCCACAACATGGAGATCGGGTGGCCCACAAATGTCCAACACGTTACCCATGTCACCTTTGATCGCTTCAACGGGTTTCTGGGTCTTCCTGTTGAGTTCGAGGTTGAGGTCCCTGGTCGAGTTCCCAGTGCAAGTGCAAGTGTGTTTGGCGTCTCAGCAGAGTCAATGCAGCTGTCTTTTGATTCAAAGGGGAACAGTGTCCCTATCATTCTCTTGCTATTGCAGGAGCGATTATACTCACAAGAAGGACTGAAGGCAGAAGGAATATTCCGTATCAACCCAGAGAACAGCCATGAGGAGCTTGTGAGAAGCCAATTGAATAGGGGGATTGTACCTGATGACATTGATGTCCATTGTCTGGCAGGCCTAATTAAAGCCTGGTTTCGAGAACTTCCTTCCGGAGTGCTAGATGGACTATCCCCTGAACAAGTTCTTCAATGTAACACAGAAGATGAATCTGTTGAGCTTGTGAAGCAGTTAAAGCCAACTGAGACCGCGTTACTCAATTGGGCTATAAATCTGATGGCTGATGTTGTTGAGGAAGAAGAATTCAACAAAATGAATGCAAGAAATATCGCTATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCTCTGACGGCTTTGATGCATGCGGTTCAAGTAATGAATTTGCTTAAGACCCTGATTATGAAAACACTGAAAGAACGGGAAGAGAATGATGAAACTGGTGGATATTCACCAATGTCATCTTGTTCATCTGATCATCAAACAGATGAAGACTTTGATAGTCAGCAAGAAATGGATACCAGATCTGAATTGGGGGGACCGGCATCAGACTTTGATGAAAATGGCCACTCCAGCTGCAGCAGTGAAGATGAAGATGAAGATGAAGATGAAGTCCGGTCGCTAAGCGAGATAGAAGCATGCTTCTTAAGACACTTGGGTGAGAATAAAGCTGTCACAAATAGCTTGGATCAATTAACAGGCGAGTTGCATGGGGAGTCTCTAAGTCCTCAAAGTTGCCTGAGTACAAGTGATGGGGAAGACTCTGGGAAACGTATAAAGAGCTCTTCATCAGTATCATGTTCAAAAATGAATGAAATGGAGATGGTGGACAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

432

Amino Acids

47.19

Weight (kDa)

4.5

Isoelectric Point (pI)

57.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 536, 796
AccB7I CCANNNNNTGG 2 cut(s) 199, 547
AccII CGCG 1 cut(s) 686
AccIII TCCGGA 1 cut(s) 587
AciI CCGC 2 cut(s) 684, 827
AclWI GGATC 2 cut(s) 797, 1155
AcoI YGGCCR 1 cut(s) 1024
AcsI RAATTY 2 cut(s) 737, 841
AcuI CTGAAG 1 cut(s) 461
AcyI GRCGYC 1 cut(s) 339
AfaI GTAC 2 cut(s) 522, 1204
AfiI CCNNNNNNNGG 2 cut(s) 199, 547
AflII CTTAAG 2 cut(s) 848, 1105
AflIII ACRYGT 1 cut(s) 229
AgsI TTSAA 8 cut(s) 164, 259, 375, 508, 626, 742, 833, 1263
AjnI CCWGG 2 cut(s) 301, 566
AleI CACNNNNGTG 1 cut(s) 1116
AluBI AGCT 9 cut(s) 81, 128, 361, 490, 655, 1035, 1130, 1143, 1242
AluI AGCT 9 cut(s) 81, 128, 361, 490, 655, 1035, 1130, 1143, 1242
Alw21I GWGCWC 2 cut(s) 83, 1244
Alw26I GTCTC 3 cut(s) 346, 674, 1182
AlwI GGATC 2 cut(s) 797, 1155
Aor13HI TCCGGA 1 cut(s) 587
AoxI GGCC 4 cut(s) 150, 212, 553, 1024
ApeKI GCWGC 4 cut(s) 128, 358, 1035, 1038
ApoI RAATTY 2 cut(s) 737, 841
Asp700I GAANNNNTTC 1 cut(s) 618
AspS9I GGNCC 3 cut(s) 213, 298, 998
AsuHPI GGTGA 5 cut(s) 31, 182, 235, 903, 1130
AvaII GGWCC 2 cut(s) 298, 998
BalI TGGCCA 1 cut(s) 1026
BanII GRGCYC 2 cut(s) 83, 1244
BbsI GAAGAC 3 cut(s) 266, 957, 1224
Bbv12I GWGCWC 2 cut(s) 83, 1244
BbvI GCAGC 4 cut(s) 115, 370, 1022, 1050
BccI CCATC 4 cut(s) 593, 706, 1205, 1276
BceAI ACGGC 2 cut(s) 141, 828
BciT130I CCWGG 2 cut(s) 303, 568
BciVI GTATCC 1 cut(s) 970
BclI TGATCA 1 cut(s) 934
BcoDI GTCTC 3 cut(s) 346, 674, 1182
BfaI CTAG 1 cut(s) 596
BfmI CTRYAG 1 cut(s) 1036
BfrI CTTAAG 2 cut(s) 848, 1105
BfuI GTATCC 1 cut(s) 970
BglII AGATCT 1 cut(s) 983
BisI GCNGC 4 cut(s) 129, 359, 1036, 1039
BlpI GCTNAGC 1 cut(s) 1082
BlsI GCNGC 4 cut(s) 130, 360, 1037, 1040
Bme1390I CCNGG 2 cut(s) 303, 568
Bme18I GGWCC 2 cut(s) 298, 998
BmgT120I GGNCC 3 cut(s) 213, 298, 998
BmiI GGNNCC 2 cut(s) 300, 999
BmrFI CCNGG 2 cut(s) 303, 568
BmrI ACTGGG 1 cut(s) 309
BmsI GCATC 2 cut(s) 810, 1013
BmuI ACTGGG 1 cut(s) 309
BpiI GAAGAC 3 cut(s) 266, 957, 1224
BpmI CTGGAG 1 cut(s) 1015
Bpu1102I GCTNAGC 1 cut(s) 1082
BsaHI GRCGYC 1 cut(s) 339
BsaI GGTCTC 1 cut(s) 674
BsaJI CCNNGG 2 cut(s) 144, 301
BsaWI WCCGGW 2 cut(s) 587, 1074
BsaXI ACNNNNNCTCC 2 cut(s) 194, 224
Bsc4I CCNNNNNNNGG 2 cut(s) 199, 547
Bse118I RCCGGY 1 cut(s) 1000
Bse1I ACTGG 2 cut(s) 315, 904
BseAI TCCGGA 1 cut(s) 587
BseBI CCWGG 2 cut(s) 303, 568
BseDI CCNNGG 2 cut(s) 144, 301
BseLI CCNNNNNNNGG 2 cut(s) 199, 547
BseMII CTCAG 5 cut(s) 96, 357, 669, 806, 1190
BseNI ACTGG 2 cut(s) 315, 904
BseRI GAGGAG 1 cut(s) 500
BseXI GCAGC 4 cut(s) 115, 370, 1022, 1050
Bsh1236I CGCG 1 cut(s) 686
Bsh1285I CGRYCG 1 cut(s) 1079
BshFI GGCC 4 cut(s) 152, 214, 555, 1026
BsiEI CGRYCG 1 cut(s) 1079
BsiHKAI GWGCWC 2 cut(s) 83, 1244
BsiSI CCGG 3 cut(s) 588, 1001, 1075
BslFI GGGAC 3 cut(s) 284, 374, 1011
BslI CCNNNNNNNGG 2 cut(s) 199, 547
BsmAI GTCTC 3 cut(s) 346, 674, 1182
BsmBI CGTCTC 1 cut(s) 346
BsmFI GGGAC 3 cut(s) 284, 374, 1011
BsmI GAATGC 1 cut(s) 757
BsnI GGCC 4 cut(s) 152, 214, 555, 1026
Bso31I GGTCTC 1 cut(s) 674
Bsp1286I GDGCHC 2 cut(s) 83, 1244
Bsp13I TCCGGA 1 cut(s) 587
Bsp143I GATC 6 cut(s) 204, 250, 802, 934, 983, 1147
Bsp1720I GCTNAGC 1 cut(s) 1082
Bsp19I CCATGG 1 cut(s) 144
BspACI CCGC 2 cut(s) 684, 827
BspANI GGCC 4 cut(s) 152, 214, 555, 1026
BspCNI CTCAG 5 cut(s) 95, 356, 670, 805, 1191
BspEI TCCGGA 1 cut(s) 587
BspFNI CGCG 1 cut(s) 686
BspLI GGNNCC 2 cut(s) 300, 999
BspMAI CTGCAG 1 cut(s) 1040
BspPI GGATC 2 cut(s) 797, 1155
BspQI GCTCTTC 2 cut(s) 84, 1249
BspTI CTTAAG 2 cut(s) 848, 1105
BspTNI GGTCTC 1 cut(s) 674
BsrFI RCCGGY 1 cut(s) 1000
BsrI ACTGG 2 cut(s) 315, 904
BssAI RCCGGY 1 cut(s) 1000
BssECI CCNNGG 2 cut(s) 144, 301
BssMI GATC 6 cut(s) 204, 250, 802, 934, 983, 1147
BssNI GRCGYC 1 cut(s) 339
BssT1I CCWWGG 1 cut(s) 144
Bst2UI CCWGG 2 cut(s) 303, 568
Bst4CI ACNGT 2 cut(s) 190, 386
Bst6I CTCTTC 3 cut(s) 84, 879, 1249
BstACI GRCGYC 1 cut(s) 339
BstAFI CTTAAG 2 cut(s) 848, 1105
BstC8I GCNNGC 4 cut(s) 154, 553, 825, 1099
BstDEI CTNAG 8 cut(s) 82, 124, 343, 678, 792, 1082, 1181, 1199
BstDSI CCRYGG 1 cut(s) 144
BstFNI CGCG 1 cut(s) 686
BstKTI GATC 6 cut(s) 207, 253, 805, 937, 986, 1150
BstMAI GTCTC 3 cut(s) 346, 674, 1182
BstMBI GATC 6 cut(s) 204, 250, 802, 934, 983, 1147
BstMCI CGRYCG 1 cut(s) 1079
BstMWI GCNNNNNNNGC 3 cut(s) 661, 670, 1032
BstNI CCWGG 2 cut(s) 303, 568
BstNSI RCATGY 2 cut(s) 827, 1101
BstSCI CCNGG 2 cut(s) 301, 566
BstSFI CTRYAG 1 cut(s) 1036
BstUI CGCG 1 cut(s) 686
BstV1I GCAGC 4 cut(s) 115, 370, 1022, 1050
BstV2I GAAGAC 3 cut(s) 266, 957, 1224
BstX2I RGATCY 1 cut(s) 983
BstYI RGATCY 1 cut(s) 983
BsuI GTATCC 1 cut(s) 970
BsuRI GGCC 4 cut(s) 152, 214, 555, 1026
BtgI CCRYGG 1 cut(s) 144
BtsI GCAGTG 1 cut(s) 1048
BtsIMutI CAGTG 4 cut(s) 322, 391, 869, 1048
Cac8I GCNNGC 4 cut(s) 154, 553, 825, 1099
Cfr10I RCCGGY 1 cut(s) 1000
Cfr13I GGNCC 3 cut(s) 213, 298, 998
CseI GACGC 1 cut(s) 328
Csp6I GTAC 2 cut(s) 521, 1203
CviAII CATG 9 cut(s) 145, 199, 239, 482, 787, 824, 1098, 1169, 1257
CviQI GTAC 2 cut(s) 521, 1203
DdeI CTNAG 8 cut(s) 82, 124, 343, 678, 792, 1082, 1181, 1199
DpnI GATC 6 cut(s) 206, 252, 804, 936, 985, 1149
DpnII GATC 6 cut(s) 204, 250, 802, 934, 983, 1147
DrdI GACNNNNNNGTC 2 cut(s) 536, 796
DseDI GACNNNNNNGTC 2 cut(s) 536, 796
EaeI YGGCCR 1 cut(s) 1024
Eam1104I CTCTTC 3 cut(s) 84, 879, 1249
EarI CTCTTC 3 cut(s) 84, 879, 1249
Ecl136II GAGCTC 2 cut(s) 81, 1242
Eco130I CCWWGG 1 cut(s) 144
Eco147I AGGCCT 1 cut(s) 555
Eco24I GRGCYC 2 cut(s) 83, 1244
Eco31I GGTCTC 1 cut(s) 674
Eco47I GGWCC 2 cut(s) 298, 998
Eco53kI GAGCTC 2 cut(s) 81, 1242
Eco57I CTGAAG 1 cut(s) 461
EcoICRI GAGCTC 2 cut(s) 81, 1242
EcoO109I RGGNCCY 1 cut(s) 298
EcoRI GAATTC 1 cut(s) 737
EcoRII CCWGG 2 cut(s) 301, 566
EcoT14I CCWWGG 1 cut(s) 144
EcoT22I ATGCAT 1 cut(s) 825
EcoT38I GRGCYC 2 cut(s) 83, 1244
ErhI CCWWGG 1 cut(s) 144
Esp3I CGTCTC 1 cut(s) 346
FaeI CATG 9 cut(s) 148, 202, 242, 485, 790, 827, 1101, 1172, 1260
FaqI GGGAC 3 cut(s) 284, 374, 1011
FatI CATG 9 cut(s) 144, 198, 238, 481, 786, 823, 1097, 1168, 1256
FbaI TGATCA 1 cut(s) 934
Fnu4HI GCNGC 4 cut(s) 129, 359, 1036, 1039
FriOI GRGCYC 2 cut(s) 83, 1244
Fsp4HI GCNGC 4 cut(s) 129, 359, 1036, 1039
FspBI CTAG 1 cut(s) 596
GluI GCNGC 4 cut(s) 129, 359, 1036, 1039
GsuI CTGGAG 1 cut(s) 1015
HaeIII GGCC 4 cut(s) 152, 214, 555, 1026
HapII CCGG 3 cut(s) 588, 1001, 1075
HgaI GACGC 1 cut(s) 328
Hin1I GRCGYC 1 cut(s) 339
Hin1II CATG 9 cut(s) 148, 202, 242, 485, 790, 827, 1101, 1172, 1260
HinfI GANTC 6 cut(s) 350, 371, 644, 790, 1175, 1220
HpaII CCGG 3 cut(s) 588, 1001, 1075
HphI GGTGA 5 cut(s) 31, 182, 235, 903, 1130
Hpy166II GTNNAC 2 cut(s) 193, 1288
Hpy188I TCNGA 8 cut(s) 85, 711, 795, 802, 810, 934, 988, 1009
Hpy188III TCNNGA 2 cut(s) 575, 588
Hpy8I GTNNAC 2 cut(s) 193, 1288
HpyAV CCTTC 5 cut(s) 128, 428, 436, 443, 594
HpyCH4III ACNGT 2 cut(s) 190, 386
HpyCH4IV ACGT 2 cut(s) 231, 1231
HpyCH4V TGCA 8 cut(s) 320, 326, 358, 412, 755, 823, 1038, 1168
HpyF10VI GCNNNNNNNGC 3 cut(s) 661, 670, 1032
HpyF3I CTNAG 8 cut(s) 82, 124, 343, 678, 792, 1082, 1181, 1199
HpySE526I ACGT 2 cut(s) 231, 1231
Hsp92I GRCGYC 1 cut(s) 339
Hsp92II CATG 9 cut(s) 148, 202, 242, 485, 790, 827, 1101, 1172, 1260
Kpn2I TCCGGA 1 cut(s) 587
Ksp22I TGATCA 1 cut(s) 934
Kzo9I GATC 6 cut(s) 204, 250, 802, 934, 983, 1147
LguI GCTCTTC 2 cut(s) 84, 1249
LmnI GCTCC 3 cut(s) 415, 487, 784
Lsp1109I GCAGC 4 cut(s) 115, 370, 1022, 1050
LweI GCATC 2 cut(s) 810, 1013
MaeI CTAG 1 cut(s) 596
MaeII ACGT 2 cut(s) 231, 1231
MaeIII GTNAC 6 cut(s) 19, 232, 241, 629, 687, 1132
MalI GATC 6 cut(s) 206, 252, 804, 936, 985, 1149
MboI GATC 6 cut(s) 204, 250, 802, 934, 983, 1147
MfeI CAATTG 2 cut(s) 503, 694
MflI RGATCY 1 cut(s) 983
MhlI GDGCHC 2 cut(s) 83, 1244
MlsI TGGCCA 1 cut(s) 1026
MluCI AATT 7 cut(s) 503, 558, 694, 737, 841, 989, 1151
MluNI TGGCCA 1 cut(s) 1026
MlyI GAGTC 4 cut(s) 359, 784, 1184, 1214
MmeI TCCRAC 1 cut(s) 250
MnlI CCTC 8 cut(s) 23, 79, 283, 289, 478, 721, 816, 1197
Mox20I TGGCCA 1 cut(s) 1026
Mph1103I ATGCAT 1 cut(s) 825
MroI TCCGGA 1 cut(s) 587
MroXI GAANNNNTTC 1 cut(s) 618
MscI TGGCCA 1 cut(s) 1026
MseI TTAA 5 cut(s) 561, 668, 849, 1106, 1154
MslI CAYNNNNRTG 1 cut(s) 1116
Msp20I TGGCCA 1 cut(s) 1026
MspA1I CMGCKG 2 cut(s) 361, 1035
MspCI CTTAAG 2 cut(s) 848, 1105
MspI CCGG 3 cut(s) 588, 1001, 1075
MspR9I CCNGG 2 cut(s) 303, 568
MunI CAATTG 2 cut(s) 503, 694
Mva1269I GAATGC 1 cut(s) 757
MvaI CCWGG 2 cut(s) 303, 568
MvnI CGCG 1 cut(s) 686
MwoI GCNNNNNNNGC 3 cut(s) 661, 670, 1032
NcoI CCATGG 1 cut(s) 144
NdeII GATC 6 cut(s) 204, 250, 802, 934, 983, 1147
NlaIII CATG 9 cut(s) 148, 202, 242, 485, 790, 827, 1101, 1172, 1260
NlaIV GGNNCC 2 cut(s) 300, 999
NmuCI GTSAC 3 cut(s) 19, 241, 1132
NsiI ATGCAT 1 cut(s) 825
NspI RCATGY 2 cut(s) 827, 1101
OliI CACNNNNGTG 1 cut(s) 1116
PaeI GCATGC 2 cut(s) 827, 1101
PceI AGGCCT 1 cut(s) 555
PciSI GCTCTTC 2 cut(s) 84, 1249
PctI GAATGC 1 cut(s) 757
PdmI GAANNNNTTC 1 cut(s) 618
PfeI GAWTC 2 cut(s) 371, 644
PflMI CCANNNNNTGG 2 cut(s) 199, 547
PkrI GCNGC 4 cut(s) 130, 360, 1037, 1040
PleI GAGTC 4 cut(s) 358, 784, 1183, 1214
PpsI GAGTC 4 cut(s) 358, 784, 1183, 1214
PpuMI RGGWCCY 1 cut(s) 298
Psp124BI GAGCTC 2 cut(s) 83, 1244
Psp5II RGGWCCY 1 cut(s) 298
Psp6I CCWGG 2 cut(s) 301, 566
PspGI CCWGG 2 cut(s) 301, 566
PspN4I GGNNCC 2 cut(s) 300, 999
PspPI GGNCC 3 cut(s) 213, 298, 998
PspPPI RGGWCCY 1 cut(s) 298
PstI CTGCAG 1 cut(s) 1040
PsuI RGATCY 1 cut(s) 983
PvuII CAGCTG 2 cut(s) 361, 1035
RsaI GTAC 2 cut(s) 522, 1204
RsaNI GTAC 2 cut(s) 521, 1203
RseI CAYNNNNRTG 1 cut(s) 1116
SacI GAGCTC 2 cut(s) 83, 1244
SapI GCTCTTC 2 cut(s) 84, 1249
SaqAI TTAA 5 cut(s) 561, 668, 849, 1106, 1154
SatI GCNGC 4 cut(s) 129, 359, 1036, 1039
Sau3AI GATC 6 cut(s) 204, 250, 802, 934, 983, 1147
Sau96I GGNCC 3 cut(s) 213, 298, 998
SchI GAGTC 4 cut(s) 359, 784, 1184, 1214
ScrFI CCNGG 2 cut(s) 303, 568
SduI GDGCHC 2 cut(s) 83, 1244
SfaNI GCATC 2 cut(s) 810, 1013
SfcI CTRYAG 1 cut(s) 1036
SinI GGWCC 2 cut(s) 298, 998
SmiMI CAYNNNNRTG 1 cut(s) 1116
SmlI CTYRAG 2 cut(s) 848, 1105
SmoI CTYRAG 2 cut(s) 848, 1105
SphI GCATGC 2 cut(s) 827, 1101
Sse9I AATT 7 cut(s) 503, 558, 694, 737, 841, 989, 1151
SseBI AGGCCT 1 cut(s) 555
SsiI CCGC 2 cut(s) 684, 827
SspI AATATT 1 cut(s) 456
SspMI CTAG 1 cut(s) 596
SstI GAGCTC 2 cut(s) 83, 1244
StuI AGGCCT 1 cut(s) 555
StyD4I CCNGG 2 cut(s) 301, 566
StyI CCWWGG 1 cut(s) 144
TaaI ACNGT 2 cut(s) 190, 386
TaiI ACGT 2 cut(s) 234, 1234
TaqI TCGA 3 cut(s) 288, 307, 574
TasI AATT 7 cut(s) 503, 558, 694, 737, 841, 989, 1151
TatI WGTACW 1 cut(s) 1202
TfiI GAWTC 2 cut(s) 371, 644
Tru1I TTAA 5 cut(s) 561, 668, 849, 1106, 1154
Tru9I TTAA 5 cut(s) 561, 668, 849, 1106, 1154
TscAI CASTG 4 cut(s) 322, 391, 876, 1048
TseFI GTSAC 3 cut(s) 19, 241, 1132
TseI GCWGC 4 cut(s) 128, 358, 1035, 1038
Tsp45I GTSAC 3 cut(s) 19, 241, 1132
TspGWI ACGGA 1 cut(s) 449
TspRI CASTG 4 cut(s) 322, 391, 876, 1048
Van91I CCANNNNNTGG 2 cut(s) 199, 547
Vha464I CTTAAG 2 cut(s) 848, 1105
VpaK11BI GGWCC 2 cut(s) 298, 998
XapI RAATTY 2 cut(s) 737, 841
XceI RCATGY 2 cut(s) 827, 1101
XcmI CCANNNNNNNNNTGG 1 cut(s) 988
XmnI GAANNNNTTC 1 cut(s) 618
XspI CTAG 1 cut(s) 596
Zsp2I ATGCAT 1 cut(s) 825
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.