Prupe.8G251400_v2.0.a1

rho GTPase-activating protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
21613196 .. 21615792
2597 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G251400.1

Sequence Viewer

Length: 1419 bp
ATGACAGGGCTTGTAATGGTGACAAGGGGAGGTGGGTGTGGTGGGAATATGAAAGGAGCCAAGGCAACAAAGAGCTCAGAGCTGGAAGAGCAGAACCAGCTCCCTCTGGTAGCCTTTCTCTTGGCTGCTATAAGGAAATCCATGGTGGCCTGCCATGTTGAGCGAGGTGAAGAACTGATCTCCGCCGTCCATCACTTGGACATCGGGTGGCCCACAAATGTCAAGCACATTACTCATGTCACCTTCGACCGCTTCAATGGATTTCTGGGTCTTCCCGTTGAGTTCGAGGTTGAGATCCCTGGTCGAGTTCCCAGTGCTAGTGTAAGTGTGTTTGGCGTCTCAGTAGAGTCAATGCAGTTGTCTTTTGATTCAAAAGGGAACAGTGTCCCTACCATTCTCTTGCTAATGCAGGAGCGGTTATACTCACAAGGAGGATTGAAGGCAGAAGGAATATTCCGTATAAACCCGGAGAACAGCCAAGAGGAGATTGTGAGAAACCAATTGAACAGGGGTATGGTGCCAGATGACATTGATGTCCATTGTTTGTCAGGTCTAATTAAGGCCTGGTTTCGAGAGCTTCCTTCGGGAGTGCTGGATGGACTATCACCTCAACAAGTACTTCAATGCGAAACAGAAGAGGACTGCGTTGAGCTTGTGAAGCAGCTAAGGCCAACTGAGGCTGCATTACTCAATTGGGCTATTGATCTGATGGCTGATGTTGTTGAAGAGGAAGAATTCAACAAAATGAATCCAAGAAATATCGCTATGGTGTTCGCTCCAAACATGACTCAGATGTCTGATCCTCTGACGGCCTTGATGCATGCTGTTCAAGTAATGAATTTGCTTAAGACCTTGATTATTAAAACACTAAGAGAACGTGAAGAGACTGATACTGGTTCGTATTCGCCCATGTCATCTCGTTCATCTGATCATCAAACAGACGAAGACTTTGATAGCCAGCAAGAGATGGAGATGGAAAGTAGCTCTGAGTTGAGTGGACCAACATCAGATTATGATGAGAATCCCCACAGCAGCCACAGAAGCGAAGACCGAGATGAAGTCCGGTCACTAAGTGAGATAGAAGAATGCTTCTTGAGACAACTGGATGAGATTAAAACTGCCACAAGTAGTTTGGAAATAATGGATGAACCAACAGCTCAGTTAGATGGGGATTGTCCGAGTCCTCAAAGCAGCTCCGGCTTCAATGGGGAGTCTGGCACATCATTTTCTGATAGCAAGAATGGGAATTCTGGTTTTAGTACAAGTGACGGGGAAGAAGACTCTGGAAAATGTATTGTAGCTGTGGAACAGGACATGGATACAGAGATCCCTGTATCAATAGCCTGTGCTAACATGGATGAAATGGAGATGGTGGACAAATTTGTGGAGCCATCGATTGCATCTAGCGGATCTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

473

Amino Acids

51.82

Weight (kDa)

4.4

Isoelectric Point (pI)

57.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 533, 793
AccB1I GGYRCC 1 cut(s) 517
AccB7I CCANNNNNTGG 1 cut(s) 196
AccBSI CCGCTC 1 cut(s) 415
AciI CCGC 4 cut(s) 183, 250, 415, 1407
AclWI GGATC 4 cut(s) 289, 794, 1321, 1417
AcsI RAATTY 4 cut(s) 734, 838, 1246, 1379
AcyI GRCGYC 1 cut(s) 336
AdeI CACNNNGTG 1 cut(s) 1073
AfaI GTAC 2 cut(s) 618, 1261
AfiI CCNNNNNNNGG 1 cut(s) 196
AflII CTTAAG 1 cut(s) 845
AgsI TTSAA 9 cut(s) 256, 372, 439, 505, 623, 725, 739, 830, 1204
AjnI CCWGG 2 cut(s) 298, 563
Alw21I GWGCWC 1 cut(s) 77
Alw26I GTCTC 3 cut(s) 343, 878, 1090
AlwI GGATC 4 cut(s) 289, 794, 1321, 1417
AoxI GGCC 5 cut(s) 147, 209, 561, 668, 810
ApeKI GCWGC 5 cut(s) 125, 661, 680, 1032, 1191
ApoI RAATTY 4 cut(s) 734, 838, 1246, 1379
ArsI GACNNNNNNTTYG 2 cut(s) 932, 964
AspS9I GGNCC 2 cut(s) 210, 998
AsuC2I CCSGG 1 cut(s) 467
AsuHPI GGTGA 4 cut(s) 31, 179, 232, 597
AvaII GGWCC 1 cut(s) 998
BanI GGYRCC 1 cut(s) 517
BanII GRGCYC 1 cut(s) 77
BbsI GAAGAC 4 cut(s) 263, 951, 1053, 1284
Bbv12I GWGCWC 1 cut(s) 77
BbvI GCAGC 5 cut(s) 112, 667, 673, 1044, 1203
BccI CCATC 8 cut(s) 198, 590, 703, 961, 967, 1160, 1363, 1399
BceAI ACGGC 2 cut(s) 170, 825
BciT130I CCWGG 2 cut(s) 300, 565
BciVI GTATCC 1 cut(s) 1312
BclI TGATCA 1 cut(s) 928
BcnI CCSGG 1 cut(s) 467
BcoDI GTCTC 3 cut(s) 343, 878, 1090
BfaI CTAG 2 cut(s) 318, 1404
BfrI CTTAAG 1 cut(s) 845
BfuI GTATCC 1 cut(s) 1312
BisI GCNGC 5 cut(s) 126, 662, 681, 1033, 1192
BlsI GCNGC 5 cut(s) 127, 663, 682, 1034, 1193
BmcAI AGTACT 1 cut(s) 618
Bme1390I CCNGG 3 cut(s) 300, 467, 565
Bme18I GGWCC 1 cut(s) 998
BmgT120I GGNCC 2 cut(s) 210, 998
BmiI GGNNCC 3 cut(s) 58, 519, 1389
BmrFI CCNGG 3 cut(s) 300, 467, 565
BmrI ACTGGG 1 cut(s) 306
BmsI GCATC 2 cut(s) 807, 1409
BmuI ACTGGG 1 cut(s) 306
BpiI GAAGAC 4 cut(s) 263, 951, 1053, 1284
Bpu10I CCTNAGC 1 cut(s) 665
BpuEI CTTGAG 1 cut(s) 1114
BpuMI CCSGG 1 cut(s) 467
Bsa29I ATCGAT 1 cut(s) 1394
BsaBI GATNNNNATC 1 cut(s) 1020
BsaHI GRCGYC 1 cut(s) 336
BsaJI CCNNGG 3 cut(s) 60, 141, 298
BsaWI WCCGGW 1 cut(s) 1062
Bsc4I CCNNNNNNNGG 1 cut(s) 196
Bse1I ACTGG 3 cut(s) 312, 898, 1107
Bse8I GATNNNNATC 1 cut(s) 1020
BseBI CCWGG 2 cut(s) 300, 565
BseCI ATCGAT 1 cut(s) 1394
BseDI CCNNGG 3 cut(s) 60, 141, 298
BseGI GGATG 4 cut(s) 601, 1111, 1150, 1363
BseJI GATNNNNATC 1 cut(s) 1020
BseLI CCNNNNNNNGG 1 cut(s) 196
BseMII CTCAG 6 cut(s) 90, 354, 666, 803, 978, 1172
BseNI ACTGG 3 cut(s) 312, 898, 1107
BseRI GAGGAG 1 cut(s) 497
BseXI GCAGC 5 cut(s) 112, 667, 673, 1044, 1203
Bsh1285I CGRYCG 1 cut(s) 250
BshFI GGCC 5 cut(s) 149, 211, 563, 670, 812
BshNI GGYRCC 1 cut(s) 517
BshVI ATCGAT 1 cut(s) 1394
BsiEI CGRYCG 1 cut(s) 250
BsiHKAI GWGCWC 1 cut(s) 77
BsiSI CCGG 3 cut(s) 467, 1063, 1197
BslFI GGGAC 1 cut(s) 371
BslI CCNNNNNNNGG 1 cut(s) 196
BsmAI GTCTC 3 cut(s) 343, 878, 1090
BsmBI CGTCTC 1 cut(s) 343
BsmFI GGGAC 1 cut(s) 371
BsmI GAATGC 1 cut(s) 1091
BsnI GGCC 5 cut(s) 149, 211, 563, 670, 812
Bsp1286I GDGCHC 1 cut(s) 77
Bsp143I GATC 7 cut(s) 177, 294, 703, 799, 928, 1326, 1409
Bsp19I CCATGG 1 cut(s) 141
BspACI CCGC 4 cut(s) 183, 250, 415, 1407
BspANI GGCC 5 cut(s) 149, 211, 563, 670, 812
BspCNI CTCAG 6 cut(s) 89, 353, 667, 802, 979, 1171
BspDI ATCGAT 1 cut(s) 1394
BspLI GGNNCC 3 cut(s) 58, 519, 1389
BspPI GGATC 4 cut(s) 289, 794, 1321, 1417
BspQI GCTCTTC 1 cut(s) 81
BspT107I GGYRCC 1 cut(s) 517
BspTI CTTAAG 1 cut(s) 845
BsrBI CCGCTC 1 cut(s) 415
BsrI ACTGG 3 cut(s) 312, 898, 1107
BssECI CCNNGG 3 cut(s) 60, 141, 298
BssMI GATC 7 cut(s) 177, 294, 703, 799, 928, 1326, 1409
BssNI GRCGYC 1 cut(s) 336
BssT1I CCWWGG 2 cut(s) 60, 141
Bst2UI CCWGG 2 cut(s) 300, 565
Bst4CI ACNGT 1 cut(s) 383
Bst6I CTCTTC 4 cut(s) 81, 630, 720, 876
BstACI GRCGYC 1 cut(s) 336
BstAFI CTTAAG 1 cut(s) 845
BstC8I GCNNGC 3 cut(s) 151, 822, 959
BstDEI CTNAG 9 cut(s) 76, 340, 665, 675, 789, 869, 987, 1070, 1158
BstDSI CCRYGG 1 cut(s) 141
BstF5I GGATG 4 cut(s) 601, 1111, 1150, 1363
BstKTI GATC 7 cut(s) 180, 297, 706, 802, 931, 1329, 1412
BstMAI GTCTC 3 cut(s) 343, 878, 1090
BstMBI GATC 7 cut(s) 177, 294, 703, 799, 928, 1326, 1409
BstMCI CGRYCG 1 cut(s) 250
BstMWI GCNNNNNNNGC 6 cut(s) 88, 97, 658, 667, 1041, 1197
BstNI CCWGG 2 cut(s) 300, 565
BstNSI RCATGY 1 cut(s) 824
BstSCI CCNGG 3 cut(s) 298, 465, 563
BstV1I GCAGC 5 cut(s) 112, 667, 673, 1044, 1203
BstV2I GAAGAC 4 cut(s) 263, 951, 1053, 1284
BstX2I RGATCY 3 cut(s) 294, 1326, 1409
BstYI RGATCY 3 cut(s) 294, 1326, 1409
Bsu15I ATCGAT 1 cut(s) 1394
BsuI GTATCC 1 cut(s) 1312
BsuRI GGCC 5 cut(s) 149, 211, 563, 670, 812
BsuTUI ATCGAT 1 cut(s) 1394
BtgI CCRYGG 1 cut(s) 141
BtsCI GGATG 4 cut(s) 601, 1111, 1150, 1363
BtsIMutI CAGTG 2 cut(s) 319, 388
Cac8I GCNNGC 3 cut(s) 151, 822, 959
Cfr13I GGNCC 2 cut(s) 210, 998
ClaI ATCGAT 1 cut(s) 1394
CseI GACGC 1 cut(s) 325
Csp6I GTAC 2 cut(s) 617, 1260
CviAII CATG 8 cut(s) 142, 155, 236, 784, 821, 910, 1315, 1354
CviQI GTAC 2 cut(s) 617, 1260
DdeI CTNAG 9 cut(s) 76, 340, 665, 675, 789, 869, 987, 1070, 1158
DpnI GATC 7 cut(s) 179, 296, 705, 801, 930, 1328, 1411
DpnII GATC 7 cut(s) 177, 294, 703, 799, 928, 1326, 1409
DraIII CACNNNGTG 1 cut(s) 1073
DrdI GACNNNNNNGTC 2 cut(s) 533, 793
DseDI GACNNNNNNGTC 2 cut(s) 533, 793
Eam1104I CTCTTC 4 cut(s) 81, 630, 720, 876
EarI CTCTTC 4 cut(s) 81, 630, 720, 876
EciI GGCGGA 1 cut(s) 172
Ecl136II GAGCTC 1 cut(s) 75
Eco130I CCWWGG 2 cut(s) 60, 141
Eco147I AGGCCT 1 cut(s) 563
Eco24I GRGCYC 1 cut(s) 77
Eco47I GGWCC 1 cut(s) 998
Eco53kI GAGCTC 1 cut(s) 75
EcoICRI GAGCTC 1 cut(s) 75
EcoRI GAATTC 2 cut(s) 734, 1246
EcoRII CCWGG 2 cut(s) 298, 563
EcoT14I CCWWGG 2 cut(s) 60, 141
EcoT22I ATGCAT 1 cut(s) 822
EcoT38I GRGCYC 1 cut(s) 77
ErhI CCWWGG 2 cut(s) 60, 141
Esp3I CGTCTC 1 cut(s) 343
FaeI CATG 8 cut(s) 145, 158, 239, 787, 824, 913, 1318, 1357
FaqI GGGAC 1 cut(s) 371
FatI CATG 8 cut(s) 141, 154, 235, 783, 820, 909, 1314, 1353
FbaI TGATCA 1 cut(s) 928
Fnu4HI GCNGC 5 cut(s) 126, 662, 681, 1033, 1192
FokI GGATG 4 cut(s) 608, 1118, 1157, 1370
FriOI GRGCYC 1 cut(s) 77
Fsp4HI GCNGC 5 cut(s) 126, 662, 681, 1033, 1192
FspBI CTAG 2 cut(s) 318, 1404
GluI GCNGC 5 cut(s) 126, 662, 681, 1033, 1192
HaeIII GGCC 5 cut(s) 149, 211, 563, 670, 812
HapII CCGG 3 cut(s) 467, 1063, 1197
HgaI GACGC 1 cut(s) 325
Hin1I GRCGYC 1 cut(s) 336
Hin1II CATG 8 cut(s) 145, 158, 239, 787, 824, 913, 1318, 1357
HinfI GANTC 8 cut(s) 347, 368, 748, 787, 1021, 1180, 1211, 1280
HpaII CCGG 3 cut(s) 467, 1063, 1197
HphI GGTGA 4 cut(s) 31, 179, 232, 597
Hpy166II GTNNAC 2 cut(s) 998, 1375
Hpy188III TCNNGA 4 cut(s) 572, 585, 1093, 1284
Hpy8I GTNNAC 2 cut(s) 998, 1375
HpyAV CCTTC 4 cut(s) 253, 433, 440, 591
HpyCH4III ACNGT 1 cut(s) 383
HpyCH4IV ACGT 1 cut(s) 877
HpyCH4V TGCA 5 cut(s) 355, 409, 683, 820, 1400
HpyF10VI GCNNNNNNNGC 6 cut(s) 88, 97, 658, 667, 1041, 1197
HpyF3I CTNAG 9 cut(s) 76, 340, 665, 675, 789, 869, 987, 1070, 1158
HpySE526I ACGT 1 cut(s) 877
Hsp92I GRCGYC 1 cut(s) 336
Hsp92II CATG 8 cut(s) 145, 158, 239, 787, 824, 913, 1318, 1357
Ksp22I TGATCA 1 cut(s) 928
Kzo9I GATC 7 cut(s) 177, 294, 703, 799, 928, 1326, 1409
LguI GCTCTTC 1 cut(s) 81
LmnI GCTCC 6 cut(s) 56, 105, 412, 781, 1199, 1387
Lsp1109I GCAGC 5 cut(s) 112, 667, 673, 1044, 1203
LweI GCATC 2 cut(s) 807, 1409
MaeI CTAG 2 cut(s) 318, 1404
MaeII ACGT 1 cut(s) 877
MaeIII GTNAC 4 cut(s) 19, 238, 1065, 1265
MalI GATC 7 cut(s) 179, 296, 705, 801, 930, 1328, 1411
MbiI CCGCTC 1 cut(s) 415
MboI GATC 7 cut(s) 177, 294, 703, 799, 928, 1326, 1409
MfeI CAATTG 2 cut(s) 500, 691
MflI RGATCY 3 cut(s) 294, 1326, 1409
MhlI GDGCHC 1 cut(s) 77
MluCI AATT 7 cut(s) 500, 555, 691, 734, 838, 1246, 1379
MlyI GAGTC 5 cut(s) 356, 781, 1189, 1220, 1274
Mph1103I ATGCAT 1 cut(s) 822
MseI TTAA 4 cut(s) 558, 846, 861, 1113
MspCI CTTAAG 1 cut(s) 845
MspI CCGG 3 cut(s) 467, 1063, 1197
MspR9I CCNGG 3 cut(s) 300, 467, 565
MunI CAATTG 2 cut(s) 500, 691
Mva1269I GAATGC 1 cut(s) 1091
MvaI CCWGG 2 cut(s) 300, 565
MwoI GCNNNNNNNGC 6 cut(s) 88, 97, 658, 667, 1041, 1197
NciI CCSGG 1 cut(s) 467
NcoI CCATGG 1 cut(s) 141
NdeII GATC 7 cut(s) 177, 294, 703, 799, 928, 1326, 1409
NlaIII CATG 8 cut(s) 145, 158, 239, 787, 824, 913, 1318, 1357
NlaIV GGNNCC 3 cut(s) 58, 519, 1389
NmuCI GTSAC 4 cut(s) 19, 238, 1065, 1265
NsiI ATGCAT 1 cut(s) 822
NspI RCATGY 1 cut(s) 824
PaeI GCATGC 1 cut(s) 824
PceI AGGCCT 1 cut(s) 563
PciSI GCTCTTC 1 cut(s) 81
PctI GAATGC 1 cut(s) 1091
PfeI GAWTC 3 cut(s) 368, 748, 1021
PflMI CCANNNNNTGG 1 cut(s) 196
PkrI GCNGC 5 cut(s) 127, 663, 682, 1034, 1193
PleI GAGTC 5 cut(s) 355, 781, 1188, 1219, 1274
PpsI GAGTC 5 cut(s) 355, 781, 1188, 1219, 1274
Psp124BI GAGCTC 1 cut(s) 77
Psp6I CCWGG 2 cut(s) 298, 563
PspGI CCWGG 2 cut(s) 298, 563
PspN4I GGNNCC 3 cut(s) 58, 519, 1389
PspPI GGNCC 2 cut(s) 210, 998
PsuI RGATCY 3 cut(s) 294, 1326, 1409
RsaI GTAC 2 cut(s) 618, 1261
RsaNI GTAC 2 cut(s) 617, 1260
SacI GAGCTC 1 cut(s) 77
SapI GCTCTTC 1 cut(s) 81
SaqAI TTAA 4 cut(s) 558, 846, 861, 1113
SatI GCNGC 5 cut(s) 126, 662, 681, 1033, 1192
Sau3AI GATC 7 cut(s) 177, 294, 703, 799, 928, 1326, 1409
Sau96I GGNCC 2 cut(s) 210, 998
ScaI AGTACT 1 cut(s) 618
SchI GAGTC 5 cut(s) 356, 781, 1189, 1220, 1274
ScrFI CCNGG 3 cut(s) 300, 467, 565
SduI GDGCHC 1 cut(s) 77
SfaNI GCATC 2 cut(s) 807, 1409
SinI GGWCC 1 cut(s) 998
SmlI CTYRAG 2 cut(s) 845, 1093
SmoI CTYRAG 2 cut(s) 845, 1093
SphI GCATGC 1 cut(s) 824
Sse9I AATT 7 cut(s) 500, 555, 691, 734, 838, 1246, 1379
SseBI AGGCCT 1 cut(s) 563
SsiI CCGC 4 cut(s) 183, 250, 415, 1407
SspI AATATT 1 cut(s) 453
SspMI CTAG 2 cut(s) 318, 1404
SstI GAGCTC 1 cut(s) 77
StuI AGGCCT 1 cut(s) 563
StyD4I CCNGG 3 cut(s) 298, 465, 563
StyI CCWWGG 2 cut(s) 60, 141
TaaI ACNGT 1 cut(s) 383
TaiI ACGT 1 cut(s) 880
TaqI TCGA 5 cut(s) 246, 285, 304, 571, 1394
TaqII GACCGA 1 cut(s) 1065
TasI AATT 7 cut(s) 500, 555, 691, 734, 838, 1246, 1379
TatI WGTACW 2 cut(s) 616, 1259
TfiI GAWTC 3 cut(s) 368, 748, 1021
Tru1I TTAA 4 cut(s) 558, 846, 861, 1113
Tru9I TTAA 4 cut(s) 558, 846, 861, 1113
TscAI CASTG 2 cut(s) 319, 388
TseFI GTSAC 4 cut(s) 19, 238, 1065, 1265
TseI GCWGC 5 cut(s) 125, 661, 680, 1032, 1191
Tsp45I GTSAC 4 cut(s) 19, 238, 1065, 1265
TspDTI ATGAA 7 cut(s) 65, 761, 851, 912, 1071, 1161, 1374
TspGWI ACGGA 1 cut(s) 446
TspRI CASTG 2 cut(s) 319, 388
Van91I CCANNNNNTGG 1 cut(s) 196
Vha464I CTTAAG 1 cut(s) 845
VpaK11BI GGWCC 1 cut(s) 998
XapI RAATTY 4 cut(s) 734, 838, 1246, 1379
XceI RCATGY 1 cut(s) 824
XcmI CCANNNNNNNNNTGG 1 cut(s) 1129
XspI CTAG 2 cut(s) 318, 1404
ZrmI AGTACT 1 cut(s) 618
Zsp2I ATGCAT 1 cut(s) 822
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.