Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015986

Physical Location & Seq

Genomic Coordinates Forward (+)

883683 .. 885611

Gene Structure 1929 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G03540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGAATCTCATCATCCTGAAGCGCCATTTCAGTCAACACGCCTCTTTATGTCTCACGCCGTCAATTTCTTCCTCTGCTCCGACGAAACAATCCCGGATCCTGGAGCTTTGTAAATTGGGTCAGCTCACCGAAGCCATTCGGATCCTAAACTCAACACACTCGTCTGAGATCCCCGCAACGCCAAAGCTTTATGCCTCTCTCTTGCAAACATGCAACAAAGTCTTCTCCTTTATCCATGGCATTCAGTTTCATGCCCATGTCGTCAAATCGGGTCTGGAAACGGACCGAAACGTTGGGAACAGCTTGCTCTCTCTGTACTTCAAGTTGGGACCTGGTATGAGGGAGACTCGGAGAGTTTTCGATGGTAGATTCGTCAAAGACGCCATCTCGTGGACTTCGATGATGTCTGGATACGTTACCGGTAAAGAACACGTTAAGGCGCTTGAGGTGTTTGTGGAGATGGTGAGTTTTGGTTTGGATGCGAATGAGTTTACGTTGTCTTCGGCGGTTAAGGCTTGCTCTGAGCTTGGAGAAGTTAGGCTAGGGAGATGTTTCCATGGTGTTGTTATTACTCATGGGTTCGAGTGGAACCATTTTATCTCTAGCACATTGGCGTATTTGTACGGTGTGAATAGAGAACCAGTAGATGCACGCCGAGTGTTCGACGAAATGCCTGAGCCAGATGTTATTTGTTGGACAGCTGTGCTTTCTGCGTTTTCTAAGAACGACTTGTACGAGGAAGCTTTGGGACTTTTTTATGCGATGCATAGAGGGAAAGGGTTGGTGCCTGATGGGTCTACATTTGGAACGGTTTTGACTGCTTGTGGTAATCTGAGGAGGCTGAAGCAAGGGAAAGAGATTCATGGGAAGCTTATTACAAATGGGATAGGTAGCAATGTGGTGGTCGAGAGTAGTCTTCTTGATATGTATGGTAAATGTGGATCCGTACGGGAGGCTAGGCAAGTGTTCAATGGAATGTCTAAGAAAAACAGTGTTTCTTGGTCTGCCTTACTCGGGGGATACTGTCAGAATGGAGAGCATGAAAAAGCAATTGAGATTTTCAGGGAGATGGAAGAGAAAGATCTGTACTGTTTCGGCACTGTTCTTAAGGCGTGTGCTGGTTTGGCGGCAGTGAGACTTGGGAAAGAAATTCATGGCCAGTATGTGAGAAGAGGGTGTTTTGGTAATGTGATTGTAGAATCGGCTTTAATTGACTTGTATGGGAAATCCGGGTGCATTGATTCTGCTAGTCGTGTTTACTCCAAGATGTCAATTAGGAACATGATAACGTGGAACGCAATGCTCTCTGCGCTTGCTCAGAATGGAAGAGGTGAAGAAGCTGTTAGTTTCTTCAATGATATGGTTAAAAAGGGGATAAAGCCTGACTACATCAGTTTTATTGCGATTCTTACTGCATGTGGTCATACGGGAATGGTTGACGAGGGACGGAATTACTTTGTGTTGATGGCTAAGAGTTACGGGATTAAACCAGGTACTGAGCATTACAGTTGCATGATTGACCTTCTAGGACGTGCAGGTTTGTTTGAAGAAGCGGAGAATCTGTTGGAGAGAGCAGAGTGTAGAAATGATGCGTCTCTGTGGGGAGTTCTGCTTGGACCTTGTGCTGCAAATGCAGATGCCTCCAGAGTTGCAGAGCGGATTGCAAAGAGAATGATGGAGTTGGAACCAAAGTACCACATGAGTTATGTGCTTCTCAGTAACATGTACAAGGCGATAGGTCGCCATGGTGATGCACTCAATATTCGTAAGTTAATGGTTAGACGAGGGGTAGCAAAGACTGTTGGACAGAGCTGGATTGATGCTCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

609

Amino Acids

67.4

Weight (kDa)

8.75

Isoelectric Point (pI)

36.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	127 - 174	4.7e-07	PPR repeat family
PPR_2	PF13041	227 - 276	3.4e-07	PPR repeat family
PPR_2	PF13041	329 - 372	3.6e-08	PPR repeat family
PPR_1	PF12854	330 - 358	2.6e-06	PPR repeat
PPR	PF01535	332 - 361	2.6e-09	PPR repeat
PPR_2	PF13041	427 - 474	5.6e-13	PPR repeat family
PPR_3	PF13812	427 - 475	1.2e-06	Pentatricopeptide repeat domain
PPR	PF01535	429 - 459	2.3e-09	PPR repeat
E_motif	PF20431	550 - 607	7.4e-10	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015986)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03540
fragaria_vesca	FvH4_6g44920
malus_domestica	MD09G1091800.v1.1
prunus_persica	Prupe.3G233200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0162111
rosa_laevigata	RLG00000021323
rosa_multiflora	Rmu_co8285235.1_g000001 Rmu_sc0004020.1_g000032 Rmu_sc0004020.1_g000033
rosa_roxburghii	Rroxscaffold_2G00088290
rosa_rugosa	Rorug02G0494700
rosa_samantha	Rh2AG561200 Rh2BG574300 Rh2CG544600
rosa_wichuraiana	Rw2G046470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1526
AccB1I	GGYRCC	1 cut(s)	784
AccB7I	CCANNNNNTGG	1 cut(s)	390
AccBSI	CCGCTC	1 cut(s)	1657
AccI	GTMKAC	1 cut(s)	797
AciI	CCGC	5 cut(s)	174, 506, 1127, 1553, 1657
AclI	AACGTT	1 cut(s)	291
AclWI	GGATC	7 cut(s)	91, 104, 136, 149, 163, 936, 949
AcoI	YGGCCR	1 cut(s)	1156
AcsI	RAATTY	1 cut(s)	1149
AcuI	CTGAAG	2 cut(s)	38, 863
AcyI	GRCGYC	1 cut(s)	381
AfaI	GTAC	8 cut(s)	317, 623, 734, 948, 1088, 1495, 1694, 1727
AfiI	CCNNNNNNNGG	3 cut(s)	100, 390, 1014
AflII	CTTAAG	1 cut(s)	1106
AflIII	ACRYGT	2 cut(s)	430, 1722
AgeI	ACCGGT	1 cut(s)	419
AgsI	TTSAA	4 cut(s)	322, 970, 1354, 1547
AjiI	CACGTC	1 cut(s)	1532
AjnI	CCWGG	3 cut(s)	99, 331, 1489
Alw26I	GTCTC	4 cut(s)	56, 338, 1129, 1599
AlwI	GGATC	7 cut(s)	91, 104, 136, 149, 163, 936, 949
AlwNI	CAGNNNCTG	1 cut(s)	1496
Ama87I	CYCGRG	1 cut(s)	1013
AoxI	GGCC	1 cut(s)	1156
ApeKI	GCWGC	1 cut(s)	1625
ApoI	RAATTY	1 cut(s)	1149
AsiGI	ACCGGT	1 cut(s)	419
Asp700I	GAANNNNTTC	1 cut(s)	135
AspLEI	GCGC	3 cut(s)	24, 442, 1312
AspS9I	GGNCC	3 cut(s)	283, 329, 1616
AsuC2I	CCSGG	2 cut(s)	94, 1231
AsuHPI	GGTGA	4 cut(s)	118, 475, 1343, 1760
AvaI	CYCGRG	1 cut(s)	1013
AvaII	GGWCC	3 cut(s)	283, 329, 1616
BaeI	ACNNNNGTAYC	2 cut(s)	1676, 1709
BalI	TGGCCA	1 cut(s)	1158
BamHI	GGATCC	3 cut(s)	96, 141, 941
BanI	GGYRCC	1 cut(s)	784
BauI	CACGAG	1 cut(s)	388
BbsI	GAAGAC	3 cut(s)	214, 492, 908
BbvI	GCAGC	1 cut(s)	1612
BccI	CCATC	7 cut(s)	356, 392, 454, 785, 1063, 1459, 1669
BceAI	ACGGC	1 cut(s)	43
BciT130I	CCWGG	3 cut(s)	101, 333, 1491
BciVI	GTATCC	2 cut(s)	404, 1013
BcnI	CCSGG	2 cut(s)	94, 1231
BcoDI	GTCTC	4 cut(s)	56, 338, 1129, 1599
BfaI	CTAG	6 cut(s)	542, 603, 957, 1248, 1526, 1828
BfoI	RGCGCY	2 cut(s)	25, 443
BfrI	CTTAAG	1 cut(s)	1106
BfuAI	ACCTGC	1 cut(s)	1526
BfuI	GTATCC	2 cut(s)	404, 1013
BglII	AGATCT	1 cut(s)	1081
BisI	GCNGC	2 cut(s)	1128, 1626
BlsI	GCNGC	2 cut(s)	1129, 1627
Bme1390I	CCNGG	5 cut(s)	94, 101, 333, 1231, 1491
Bme18I	GGWCC	3 cut(s)	283, 329, 1616
BmeT110I	CYCGRG	1 cut(s)	1013
BmgBI	CACGTC	1 cut(s)	1532
BmgT120I	GGNCC	3 cut(s)	283, 329, 1616
BmiI	GGNNCC	7 cut(s)	98, 143, 330, 590, 786, 943, 1686
BmrFI	CCNGG	5 cut(s)	94, 101, 333, 1231, 1491
BmsI	GCATC	7 cut(s)	469, 637, 753, 1579, 1627, 1741, 1810
BpiI	GAAGAC	3 cut(s)	214, 492, 908
BplI	GAGNNNNNCTC	2 cut(s)	331, 363
BpmI	CTGGAG	2 cut(s)	122, 1627
Bpu10I	CCTNAGC	1 cut(s)	675
BpuEI	CTTGAG	1 cut(s)	464
BpuMI	CCSGG	2 cut(s)	94, 1231
BsaHI	GRCGYC	1 cut(s)	381
BsaJI	CCNNGG	3 cut(s)	235, 556, 1744
BsaWI	WCCGGW	1 cut(s)	419
BsaXI	ACNNNNNCTCC	2 cut(s)	1547, 1577
Bsc4I	CCNNNNNNNGG	3 cut(s)	100, 390, 1014
Bse118I	RCCGGY	1 cut(s)	419
Bse1I	ACTGG	2 cut(s)	641, 1159
Bse3DI	GCAATG	2 cut(s)	901, 1305
BseBI	CCWGG	3 cut(s)	101, 333, 1491
BseDI	CCNNGG	3 cut(s)	235, 556, 1744
BseGI	GGATG	2 cut(s)	12, 484
BseLI	CCNNNNNNNGG	3 cut(s)	100, 390, 1014
BseMI	GCAATG	2 cut(s)	901, 1305
BseMII	CTCAG	7 cut(s)	156, 513, 666, 824, 1331, 1488, 1729
BseNI	ACTGG	2 cut(s)	641, 1159
BseRI	GAGGAG	1 cut(s)	850
BseXI	GCAGC	1 cut(s)	1612
BsgI	GTGCAG	1 cut(s)	1554
BshFI	GGCC	1 cut(s)	1158
BshNI	GGYRCC	1 cut(s)	784
BshTI	ACCGGT	1 cut(s)	419
BsiHKCI	CYCGRG	1 cut(s)	1013
BsiSI	CCGG	3 cut(s)	94, 420, 1230
BsiWI	CGTACG	1 cut(s)	946
BslFI	GGGAC	3 cut(s)	342, 762, 1458
BslI	CCNNNNNNNGG	3 cut(s)	100, 390, 1014
BsmAI	GTCTC	4 cut(s)	56, 338, 1129, 1599
BsmBI	CGTCTC	1 cut(s)	1599
BsmFI	GGGAC	3 cut(s)	342, 762, 1458
BsmI	GAATGC	1 cut(s)	240
BsnI	GGCC	1 cut(s)	1158
BsoBI	CYCGRG	1 cut(s)	1013
Bsp1407I	TGTACA	1 cut(s)	1725
Bsp143I	GATC	5 cut(s)	96, 141, 168, 941, 1081
Bsp19I	CCATGG	3 cut(s)	235, 556, 1744
BspACI	CCGC	5 cut(s)	174, 506, 1127, 1553, 1657
BspANI	GGCC	1 cut(s)	1158
BspCNI	CTCAG	7 cut(s)	157, 514, 667, 825, 1330, 1489, 1728
BspLI	GGNNCC	7 cut(s)	98, 143, 330, 590, 786, 943, 1686
BspMI	ACCTGC	1 cut(s)	1526
BspPI	GGATC	7 cut(s)	91, 104, 136, 149, 163, 936, 949
BspT107I	GGYRCC	1 cut(s)	784
BspTI	CTTAAG	1 cut(s)	1106
BsrBI	CCGCTC	1 cut(s)	1657
BsrDI	GCAATG	2 cut(s)	901, 1305
BsrFI	RCCGGY	1 cut(s)	419
BsrGI	TGTACA	1 cut(s)	1725
BsrI	ACTGG	2 cut(s)	641, 1159
BssAI	RCCGGY	1 cut(s)	419
BssECI	CCNNGG	3 cut(s)	235, 556, 1744
BssMI	GATC	5 cut(s)	96, 141, 168, 941, 1081
BssNI	GRCGYC	1 cut(s)	381
BssSI	CACGAG	1 cut(s)	388
BssT1I	CCWWGG	3 cut(s)	235, 556, 1744
Bst2BI	CACGAG	1 cut(s)	388
Bst2UI	CCWGG	3 cut(s)	101, 333, 1491
Bst4CI	ACNGT	8 cut(s)	626, 811, 992, 1025, 1091, 1102, 1508, 1801
Bst6I	CTCTTC	3 cut(s)	1068, 1165, 1321
BstACI	GRCGYC	1 cut(s)	381
BstAFI	CTTAAG	1 cut(s)	1106
BstAUI	TGTACA	1 cut(s)	1725
BstC8I	GCNNGC	4 cut(s)	305, 517, 652, 1314
BstDSI	CCRYGG	3 cut(s)	235, 556, 1744
BstF5I	GGATG	2 cut(s)	12, 484
BstH2I	RGCGCY	2 cut(s)	25, 443
BstHHI	GCGC	3 cut(s)	24, 442, 1312
BstKTI	GATC	5 cut(s)	99, 144, 171, 944, 1084
BstMAI	GTCTC	4 cut(s)	56, 338, 1129, 1599
BstMBI	GATC	5 cut(s)	96, 141, 168, 941, 1081
BstMWI	GCNNNNNNNGC	4 cut(s)	512, 1124, 1309, 1631
BstNI	CCWGG	3 cut(s)	101, 333, 1491
BstNSI	RCATGY	3 cut(s)	213, 1419, 1726
BstSCI	CCNGG	5 cut(s)	92, 99, 331, 1229, 1489
BstV1I	GCAGC	1 cut(s)	1612
BstV2I	GAAGAC	3 cut(s)	214, 492, 908
BstX2I	RGATCY	5 cut(s)	96, 141, 168, 941, 1081
BstYI	RGATCY	5 cut(s)	96, 141, 168, 941, 1081
BsuI	GTATCC	2 cut(s)	404, 1013
BsuRI	GGCC	1 cut(s)	1158
BtgI	CCRYGG	3 cut(s)	235, 556, 1744
BtgZI	GCGATG	1 cut(s)	776
BtrI	CACGTC	1 cut(s)	1532
BtsCI	GGATG	2 cut(s)	12, 484
BtsI	GCAGTG	1 cut(s)	1137
BtsIMutI	CAGTG	3 cut(s)	997, 1098, 1137
BveI	ACCTGC	1 cut(s)	1526
Cac8I	GCNNGC	4 cut(s)	305, 517, 652, 1314
CaiI	CAGNNNCTG	1 cut(s)	1496
CfoI	GCGC	3 cut(s)	24, 442, 1312
Cfr10I	RCCGGY	1 cut(s)	419
Cfr13I	GGNCC	3 cut(s)	283, 329, 1616
CpoI	CGGWCCG	1 cut(s)	283
CseI	GACGC	2 cut(s)	389, 1581
CsiI	ACCWGGT	2 cut(s)	331, 1489
Csp6I	GTAC	8 cut(s)	316, 622, 733, 947, 1087, 1494, 1693, 1726
CspAI	ACCGGT	1 cut(s)	419
CspI	CGGWCCG	1 cut(s)	283
CviQI	GTAC	8 cut(s)	316, 622, 733, 947, 1087, 1494, 1693, 1726
DpnI	GATC	5 cut(s)	98, 143, 170, 943, 1083
DpnII	GATC	5 cut(s)	96, 141, 168, 941, 1081
EaeI	YGGCCR	1 cut(s)	1156
Eam1104I	CTCTTC	3 cut(s)	1068, 1165, 1321
EarI	CTCTTC	3 cut(s)	1068, 1165, 1321
Eco130I	CCWWGG	3 cut(s)	235, 556, 1744
Eco47I	GGWCC	3 cut(s)	283, 329, 1616
Eco57I	CTGAAG	2 cut(s)	38, 863
Eco88I	CYCGRG	1 cut(s)	1013
EcoO109I	RGGNCCY	1 cut(s)	329
EcoRII	CCWGG	3 cut(s)	99, 331, 1489
EcoT14I	CCWWGG	3 cut(s)	235, 556, 1744
EcoT22I	ATGCAT	1 cut(s)	768
ErhI	CCWWGG	3 cut(s)	235, 556, 1744
Esp3I	CGTCTC	1 cut(s)	1599
FalI	AAGNNNNNCTT	2 cut(s)	713, 745
FaqI	GGGAC	3 cut(s)	342, 762, 1458
FauI	CCCGC	1 cut(s)	181
FblI	GTMKAC	1 cut(s)	797
Fnu4HI	GCNGC	2 cut(s)	1128, 1626
FokI	GGATG	1 cut(s)	491
Fsp4HI	GCNGC	2 cut(s)	1128, 1626
FspBI	CTAG	6 cut(s)	542, 603, 957, 1248, 1526, 1828
GlaI	GCGC	3 cut(s)	23, 441, 1311
GluI	GCNGC	2 cut(s)	1128, 1626
GsuI	CTGGAG	2 cut(s)	122, 1627
HaeII	RGCGCY	2 cut(s)	25, 443
HaeIII	GGCC	1 cut(s)	1158
HapII	CCGG	3 cut(s)	94, 420, 1230
HgaI	GACGC	2 cut(s)	389, 1581
HhaI	GCGC	3 cut(s)	24, 442, 1312
Hin1I	GRCGYC	1 cut(s)	381
Hin6I	GCGC	3 cut(s)	22, 440, 1310
HinP1I	GCGC	3 cut(s)	22, 440, 1310
HincII	GTYRAC	2 cut(s)	35, 1438
HindII	GTYRAC	2 cut(s)	35, 1438
HindIII	AAGCTT	3 cut(s)	185, 741, 869
HinfI	GANTC	8 cut(s)	4, 346, 369, 859, 1199, 1241, 1405, 1558
HpaII	CCGG	3 cut(s)	94, 420, 1230
HphI	GGTGA	4 cut(s)	118, 475, 1343, 1760
Hpy166II	GTNNAC	6 cut(s)	35, 393, 492, 798, 1258, 1438
Hpy188I	TCNGA	8 cut(s)	81, 141, 166, 351, 523, 834, 1029, 1320
Hpy188III	TCNNGA	6 cut(s)	16, 275, 408, 907, 920, 1644
Hpy8I	GTNNAC	6 cut(s)	35, 393, 492, 798, 1258, 1438
Hpy99I	CGWCG	2 cut(s)	85, 668
HpyAV	CCTTC	1 cut(s)	1532
HpyCH4III	ACNGT	8 cut(s)	626, 811, 992, 1025, 1091, 1102, 1508, 1801
HpyCH4IV	ACGT	6 cut(s)	291, 414, 432, 494, 1289, 1531
HpyF10VI	GCNNNNNNNGC	4 cut(s)	512, 1124, 1309, 1631
HpySE526I	ACGT	6 cut(s)	291, 414, 432, 494, 1289, 1531
Hsp92I	GRCGYC	1 cut(s)	381
HspAI	GCGC	3 cut(s)	22, 440, 1310
Kzo9I	GATC	5 cut(s)	96, 141, 168, 941, 1081
LmnI	GCTCC	2 cut(s)	82, 103
Lsp1109I	GCAGC	1 cut(s)	1612
LweI	GCATC	7 cut(s)	469, 637, 753, 1579, 1627, 1741, 1810
MabI	ACCWGGT	2 cut(s)	331, 1489
MaeI	CTAG	6 cut(s)	542, 603, 957, 1248, 1526, 1828
MaeII	ACGT	6 cut(s)	291, 414, 432, 494, 1289, 1531
MaeIII	GTNAC	3 cut(s)	415, 1475, 1718
MalI	GATC	5 cut(s)	98, 143, 170, 943, 1083
MbiI	CCGCTC	1 cut(s)	1657
MboI	GATC	5 cut(s)	96, 141, 168, 941, 1081
MfeI	CAATTG	1 cut(s)	1050
MflI	RGATCY	5 cut(s)	96, 141, 168, 941, 1081
MlsI	TGGCCA	1 cut(s)	1158
MluCI	AATT	7 cut(s)	63, 113, 1050, 1149, 1209, 1272, 1450
MluNI	TGGCCA	1 cut(s)	1158
MlyI	GAGTC	1 cut(s)	340
MmeI	TCCRAC	5 cut(s)	104, 674, 1545, 1662, 1783
Mox20I	TGGCCA	1 cut(s)	1158
Mph1103I	ATGCAT	1 cut(s)	768
MroXI	GAANNNNTTC	1 cut(s)	135
MscI	TGGCCA	1 cut(s)	1158
MseI	TTAA	7 cut(s)	435, 510, 1107, 1208, 1365, 1485, 1772
MslI	CAYNNNNRTG	2 cut(s)	255, 1749
Msp20I	TGGCCA	1 cut(s)	1158
MspA1I	CMGCKG	1 cut(s)	701
MspCI	CTTAAG	1 cut(s)	1106
MspI	CCGG	3 cut(s)	94, 420, 1230
MspR9I	CCNGG	5 cut(s)	94, 101, 333, 1231, 1491
MunI	CAATTG	1 cut(s)	1050
Mva1269I	GAATGC	1 cut(s)	240
MvaI	CCWGG	3 cut(s)	101, 333, 1491
MwoI	GCNNNNNNNGC	4 cut(s)	512, 1124, 1309, 1631
NciI	CCSGG	2 cut(s)	94, 1231
NcoI	CCATGG	3 cut(s)	235, 556, 1744
NdeII	GATC	5 cut(s)	96, 141, 168, 941, 1081
NlaIV	GGNNCC	7 cut(s)	98, 143, 330, 590, 786, 943, 1686
NmeAIII	GCCGAG	1 cut(s)	680
NsiI	ATGCAT	1 cut(s)	768
NspI	RCATGY	3 cut(s)	213, 1419, 1726
PciI	ACATGT	1 cut(s)	1722
PcsI	WCGNNNNNNNCGW	2 cut(s)	395, 732
PctI	GAATGC	1 cut(s)	240
PdmI	GAANNNNTTC	1 cut(s)	135
PfeI	GAWTC	7 cut(s)	4, 369, 859, 1199, 1241, 1405, 1558
Pfl23II	CGTACG	1 cut(s)	946
PflMI	CCANNNNNTGG	1 cut(s)	390
PfoI	TCCNGGA	2 cut(s)	92, 99
PinAI	ACCGGT	1 cut(s)	419
PkrI	GCNGC	2 cut(s)	1129, 1627
PleI	GAGTC	1 cut(s)	340
PpsI	GAGTC	1 cut(s)	340
PpuMI	RGGWCCY	1 cut(s)	329
PscI	ACATGT	1 cut(s)	1722
Psp1406I	AACGTT	1 cut(s)	291
Psp5II	RGGWCCY	1 cut(s)	329
Psp6I	CCWGG	3 cut(s)	99, 331, 1489
PspGI	CCWGG	3 cut(s)	99, 331, 1489
PspLI	CGTACG	1 cut(s)	946
PspN4I	GGNNCC	7 cut(s)	98, 143, 330, 590, 786, 943, 1686
PspPI	GGNCC	3 cut(s)	283, 329, 1616
PspPPI	RGGWCCY	1 cut(s)	329
PsrI	GAACNNNNNNTAC	2 cut(s)	716, 748
PstNI	CAGNNNCTG	1 cut(s)	1496
PsuI	RGATCY	5 cut(s)	96, 141, 168, 941, 1081
PvuII	CAGCTG	1 cut(s)	701
RsaI	GTAC	8 cut(s)	317, 623, 734, 948, 1088, 1495, 1694, 1727
RsaNI	GTAC	8 cut(s)	316, 622, 733, 947, 1087, 1494, 1693, 1726
RseI	CAYNNNNRTG	2 cut(s)	255, 1749
Rsr2I	CGGWCCG	1 cut(s)	283
RsrII	CGGWCCG	1 cut(s)	283
SaqAI	TTAA	7 cut(s)	435, 510, 1107, 1208, 1365, 1485, 1772
SatI	GCNGC	2 cut(s)	1128, 1626
Sau3AI	GATC	5 cut(s)	96, 141, 168, 941, 1081
Sau96I	GGNCC	3 cut(s)	283, 329, 1616
SchI	GAGTC	1 cut(s)	340
ScrFI	CCNGG	5 cut(s)	94, 101, 333, 1231, 1491
SexAI	ACCWGGT	2 cut(s)	331, 1489
SfaNI	GCATC	7 cut(s)	469, 637, 753, 1579, 1627, 1741, 1810
SinI	GGWCC	3 cut(s)	283, 329, 1616
SmiMI	CAYNNNNRTG	2 cut(s)	255, 1749
SmlI	CTYRAG	2 cut(s)	443, 1106
SmoI	CTYRAG	2 cut(s)	443, 1106
Sse9I	AATT	7 cut(s)	63, 113, 1050, 1149, 1209, 1272, 1450
SsiI	CCGC	5 cut(s)	174, 506, 1127, 1553, 1657
SspI	AATATT	1 cut(s)	1762
SspMI	CTAG	6 cut(s)	542, 603, 957, 1248, 1526, 1828
StyD4I	CCNGG	5 cut(s)	92, 99, 331, 1229, 1489
StyI	CCWWGG	3 cut(s)	235, 556, 1744
TaaI	ACNGT	8 cut(s)	626, 811, 992, 1025, 1091, 1102, 1508, 1801
TaiI	ACGT	6 cut(s)	294, 417, 435, 497, 1292, 1534
TaqI	TCGA	5 cut(s)	360, 398, 582, 663, 906
TaqII	GACCGA	1 cut(s)	300
TasI	AATT	7 cut(s)	63, 113, 1050, 1149, 1209, 1272, 1450
TatI	WGTACW	3 cut(s)	315, 1086, 1725
TauI	GCSGC	1 cut(s)	1130
TfiI	GAWTC	7 cut(s)	4, 369, 859, 1199, 1241, 1405, 1558
Tru1I	TTAA	7 cut(s)	435, 510, 1107, 1208, 1365, 1485, 1772
Tru9I	TTAA	7 cut(s)	435, 510, 1107, 1208, 1365, 1485, 1772
TscAI	CASTG	3 cut(s)	997, 1105, 1137
TseI	GCWGC	1 cut(s)	1625
TspDTI	ATGAA	5 cut(s)	17, 239, 851, 1056, 1142
TspGWI	ACGGA	3 cut(s)	296, 934, 1462
TspRI	CASTG	3 cut(s)	997, 1105, 1137
Van91I	CCANNNNNTGG	1 cut(s)	390
Vha464I	CTTAAG	1 cut(s)	1106
VpaK11BI	GGWCC	3 cut(s)	283, 329, 1616
XapI	RAATTY	1 cut(s)	1149
XceI	RCATGY	3 cut(s)	213, 1419, 1726
XmiI	GTMKAC	1 cut(s)	797
XmnI	GAANNNNTTC	1 cut(s)	135
XspI	CTAG	6 cut(s)	542, 603, 957, 1248, 1526, 1828
Zsp2I	ATGCAT	1 cut(s)	768

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.