Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0015986

Physical Location & Seq

Genomic Coordinates Forward (+)

34535548 .. 34537856

Gene Structure 2309 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g44920.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGAAGCTCTTCTTCTTCTTCAAGCGCTATTACACCTCACTCCTCCCCTCCAATCTCCCCAAACCCCAGAACCCACCACCCAAACAATCCCAAATCCTCCGCCTCTGCAAATCCGGCCTCCTTCTCGACGCCATTCATCTCCTCAACTCCACAAACCCCTCCAAACTCACCCTCAAACCTCTCCTCTACGCTTCACTCCTCCAAACATGCACCAAAGCCGTCTCTCTCACTCACGGCCTCCAAATCCACTCCCACGTCATCAAAACCGGCCTCGAAACCGACCGCTTCGTCGGCAACAGCCTCCTCTCCCTCTACTTCAAGCTCATCCCCAACATGACCCAAACCCAAAAAGTGTTTGACGCCCTGTATTTCAAAGATGTGATATCGTGGACTTCCATGATCACCGGCTACGTTCGCGCCGGGAAGCCTGCTACTTCAGTTGAGTTGTTTTGGGAGATGGTGAGGTTCGGAATTGAGCCGAATGACTTCACTGTCTCCGCGGTGGTCAAGGCCTGTTCGCAGCTCGGGCGCGTGAGCCTGGGACGGTGCTTACATTGTTTAGTTGTGAGTAGAGGATGTGATTCGAATCCGGTAATTATTAGTGCTCTGATTGACATGTATGGGAGAAACCATAGGCCGGGGGATGCACGTCAGCTGTTCGATGAAATGCGTGAACCGGGGGCGATATGTTGGACGTCGGTTATATCTGCGCTGACGCGGAGCGATTTGTTTAGGGAGGCATTGGGGTATTTTTACTTGATGCAGAGATGTCATGGGTTGTTTCCTGATGGGTTTACGTTTGGGACTGTGTTGACTGCTTGTGGGAATTTGGAGAGGCTGAGGCAAGGGCGAGAAGTGCACGCGAAGGTGGTTACATATGGGATTAAGGGGAATGTGGTTGTGGAGAGTAGCTTGGTTGATATGTATGGGAAATGTGGGAGTGTGGATGATTCTCGACGGGTTTTTGATAGGATGGCTGTGAAGAACTCTGTTTCGTGGTCTGCGTTGCTCGGGGTGTACTGTCAAGCTGGGGAGTTTGAGTCTGTTATTAAGAATTTTAGGGAAATGGAAGAGGCTGACCTATATTGCTTTGGAACTGTTCTTCGTGCGTGTGCAGGTTTGGCGGCTGTGCAGCATGGGAAAGAAGTTCACTGCCAGTATGTGAGGAGGTGTGGTTGGAGAGATGTGATTGTTGAGTCGGCTCTAGTTAATCTTTATGCAAAATGTGGCTGCATAGATTTTGCGAGTAGTGTTTTCGCGCAGATGCTGGTTAGGAATTTGATTACATGGAACTCGATGATTTGTGGGTTTGCTCAGAACGGGCAAGGTGAAGAAGCTCTTAAAATATTTGATGAGATGATTAAGGAGGGGATGAAGCCTGACTATATCAGCTTTATTGGGGTTTTGTTTGCTTGTAGTCATGCAGGTCTAGTTGATCAAGGGCGAAAGAATTTTATCTTAATGACGAAAAAGTATGGGATCAAACCTGGGATTGAACATTATTGTTGCATGGTTGATCTCCTCGGCCGTGCGGGGCTACTGGAAGAAGCAGAGAATTTAATAGAGAGTGCCGAGTGTAGAAATGATTCTTCCCTTTGGGCAGTTCTTCTAGGTGCTAGCACAAGCTGTACGAACTCTGCTACTGCAGAGCGCATAGCCAAGAAAATGATAAAACTTGAACCTGACTACCATTTGAGTTATGTTCTTCTAGCTAATGTATACAGATCAGTAGGCCGATGGGATGATGCCGTGGAGATTGCCAAGCTGATGCAAGATAGAGGAGTTAAGAAGAATCCGGCTAAGAGCTGGATTGAATCTAAAAGTAGATTGGGTTCTCATATTCGTGTTGGTGATGTGCACATACCTAGAAAAATCGATTTTAATGCCGTTTGGGGACATTGTGTGAAAACCAGAATAGATCGGAGTGAATCAACAGTAGAGTATCAACCCATGTTGGAGGCTGGAGTACAGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

659

Amino Acids

73.65

Weight (kDa)

8.76

Isoelectric Point (pI)

33.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	125 - 173	9.5e-11	PPR repeat family
PPR	PF01535	128 - 158	8.5e-07	PPR repeat
PPR_1	PF12854	423 - 453	6.6e-07	PPR repeat
PPR_2	PF13041	426 - 472	1.9e-11	PPR repeat family
PPR	PF01535	428 - 457	1.1e-10	PPR repeat
E_motif	PF20431	548 - 605	1.7e-11	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015986)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03540
fragaria_vesca	FvH4_6g44920
malus_domestica	MD09G1091800.v1.1
prunus_persica	Prupe.3G233200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0162111
rosa_laevigata	RLG00000021323
rosa_multiflora	Rmu_co8285235.1_g000001 Rmu_sc0004020.1_g000032 Rmu_sc0004020.1_g000033
rosa_roxburghii	Rroxscaffold_2G00088290
rosa_rugosa	Rorug02G0494700
rosa_samantha	Rh2AG561200 Rh2BG574300 Rh2CG544600
rosa_wichuraiana	Rw2G046470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	287, 491
AatII	GACGTC	1 cut(s)	698
Acc36I	ACCTGC	2 cut(s)	1106, 1415
AccI	GTMKAC	1 cut(s)	1719
AccII	CGCG	6 cut(s)	417, 500, 531, 718, 863, 1259
AciI	CCGC	7 cut(s)	100, 283, 498, 500, 718, 1124, 1532
AclWI	GGATC	1 cut(s)	1487
AcoI	YGGCCR	1 cut(s)	1525
AcsI	RAATTY	5 cut(s)	826, 1054, 1276, 1450, 1555
AcuI	CTGAAG	1 cut(s)	420
AcyI	GRCGYC	3 cut(s)	129, 360, 695
AfaI	GTAC	3 cut(s)	1019, 1630, 1968
AfeI	AGCGCT	1 cut(s)	26
AfiI	CCNNNNNNNGG	1 cut(s)	637
AflIII	ACRYGT	1 cut(s)	615
AgsI	TTSAA	6 cut(s)	22, 319, 373, 1496, 1679, 1814
AjiI	CACGTC	2 cut(s)	256, 650
AjnI	CCWGG	2 cut(s)	537, 1486
Alw21I	GWGCWC	3 cut(s)	607, 861, 1860
Alw26I	GTCTC	2 cut(s)	226, 499
Alw44I	GTGCAC	2 cut(s)	857, 1856
AlwI	GGATC	1 cut(s)	1487
AlwNI	CAGNNNCTG	1 cut(s)	1267
Ama87I	CYCGRG	2 cut(s)	524, 1010
Aor51HI	AGCGCT	1 cut(s)	26
AoxI	GGCC	7 cut(s)	115, 235, 268, 510, 635, 1525, 1732
ApaLI	GTGCAC	2 cut(s)	857, 1856
ApeKI	GCWGC	3 cut(s)	520, 1132, 1230
ApoI	RAATTY	5 cut(s)	826, 1054, 1276, 1450, 1555
Asp700I	GAANNNNTTC	3 cut(s)	8, 485, 1585
AspLEI	GCGC	6 cut(s)	27, 419, 531, 712, 1261, 1653
AsuC2I	CCSGG	3 cut(s)	421, 639, 678
AsuHPI	GGTGA	5 cut(s)	160, 394, 472, 1340, 1862
AsuII	TTCGAA	1 cut(s)	584
AsuNHI	GCTAGC	1 cut(s)	1616
AvaI	CYCGRG	2 cut(s)	524, 1010
BaeGI	GKGCMC	2 cut(s)	861, 1860
Bbv12I	GWGCWC	3 cut(s)	607, 861, 1860
BbvCI	CCTCAGC	1 cut(s)	839
BbvI	GCAGC	3 cut(s)	532, 1144, 1217
BccI	CCATC	4 cut(s)	451, 782, 967, 1731
BceAI	ACGGC	5 cut(s)	203, 250, 1512, 1733, 1871
BcgI	CGANNNNNNTGC	2 cut(s)	1865, 1899
BciT130I	CCWGG	2 cut(s)	539, 1488
BclI	TGATCA	2 cut(s)	399, 1435
BcnI	CCSGG	3 cut(s)	421, 639, 678
BcoDI	GTCTC	2 cut(s)	226, 499
BfaI	CTAG	6 cut(s)	1205, 1430, 1610, 1617, 1709, 1866
BfmI	CTRYAG	1 cut(s)	1644
BfoI	RGCGCY	1 cut(s)	28
BfuAI	ACCTGC	2 cut(s)	1106, 1415
BisI	GCNGC	4 cut(s)	521, 1125, 1133, 1231
BlsI	GCNGC	4 cut(s)	522, 1126, 1134, 1232
Bme1390I	CCNGG	5 cut(s)	421, 539, 639, 678, 1488
BmeT110I	CYCGRG	2 cut(s)	524, 1010
BmgBI	CACGTC	2 cut(s)	256, 650
BmrFI	CCNGG	5 cut(s)	421, 539, 639, 678, 1488
BmsI	GCATC	5 cut(s)	634, 750, 1254, 1735, 1758
BmtI	GCTAGC	1 cut(s)	1620
Bpu10I	CCTNAGC	1 cut(s)	839
Bpu14I	TTCGAA	1 cut(s)	584
BpuMI	CCSGG	3 cut(s)	421, 639, 678
Bsa29I	ATCGAT	1 cut(s)	1875
BsaBI	GATNNNNATC	1 cut(s)	585
BsaHI	GRCGYC	3 cut(s)	129, 360, 695
BsaJI	CCNNGG	7 cut(s)	498, 538, 638, 677, 1487, 1522, 1749
BsaWI	WCCGGW	1 cut(s)	589
BsaXI	ACNNNNNCTCC	4 cut(s)	1025, 1055, 1159, 1189
Bsc4I	CCNNNNNNNGG	1 cut(s)	637
Bse118I	RCCGGY	2 cut(s)	266, 404
Bse1I	ACTGG	2 cut(s)	1156, 1545
Bse8I	GATNNNNATC	1 cut(s)	585
BseBI	CCWGG	2 cut(s)	539, 1488
BseCI	ATCGAT	1 cut(s)	1875
BseDI	CCNNGG	7 cut(s)	498, 538, 638, 677, 1487, 1522, 1749
BseGI	GGATG	7 cut(s)	324, 581, 649, 952, 978, 1377, 1747
BseJI	GATNNNNATC	1 cut(s)	585
BseLI	CCNNNNNNNGG	1 cut(s)	637
BseMII	CTCAG	2 cut(s)	830, 1328
BseNI	ACTGG	2 cut(s)	1156, 1545
BseRI	GAGGAG	8 cut(s)	32, 131, 173, 188, 293, 1180, 1511, 1794
BseSI	GKGCMC	2 cut(s)	861, 1860
BseX3I	CGGCCG	1 cut(s)	1525
BseXI	GCAGC	3 cut(s)	532, 1144, 1217
BseYI	CCCAGC	1 cut(s)	1028
BsgI	GTGCAG	2 cut(s)	1134, 1151
Bsh1236I	CGCG	6 cut(s)	417, 500, 531, 718, 863, 1259
Bsh1285I	CGRYCG	2 cut(s)	283, 1528
BshFI	GGCC	7 cut(s)	117, 237, 270, 512, 637, 1527, 1734
BshVI	ATCGAT	1 cut(s)	1875
BsiEI	CGRYCG	2 cut(s)	283, 1528
BsiHKAI	GWGCWC	3 cut(s)	607, 861, 1860
BsiHKCI	CYCGRG	2 cut(s)	524, 1010
BsiSI	CCGG	8 cut(s)	114, 267, 405, 420, 590, 638, 677, 1796
BslFI	GGGAC	3 cut(s)	555, 817, 1908
BslI	CCNNNNNNNGG	1 cut(s)	637
BsmAI	GTCTC	2 cut(s)	226, 499
BsmBI	CGTCTC	1 cut(s)	226
BsmFI	GGGAC	3 cut(s)	555, 817, 1908
BsnI	GGCC	7 cut(s)	117, 237, 270, 512, 637, 1527, 1734
BsoBI	CYCGRG	2 cut(s)	524, 1010
Bsp119I	TTCGAA	1 cut(s)	584
Bsp1286I	GDGCHC	3 cut(s)	607, 861, 1860
Bsp143I	GATC	6 cut(s)	399, 1435, 1479, 1516, 1724, 1918
BspACI	CCGC	7 cut(s)	100, 283, 498, 500, 718, 1124, 1532
BspANI	GGCC	7 cut(s)	117, 237, 270, 512, 637, 1527, 1734
BspCNI	CTCAG	2 cut(s)	831, 1327
BspDI	ATCGAT	1 cut(s)	1875
BspFNI	CGCG	6 cut(s)	417, 500, 531, 718, 863, 1259
BspMAI	CTGCAG	1 cut(s)	1648
BspMI	ACCTGC	2 cut(s)	1106, 1415
BspOI	GCTAGC	1 cut(s)	1620
BspPI	GGATC	1 cut(s)	1487
BspQI	GCTCTTC	1 cut(s)	14
BspT104I	TTCGAA	1 cut(s)	584
BsrFI	RCCGGY	2 cut(s)	266, 404
BsrI	ACTGG	2 cut(s)	1156, 1545
BssAI	RCCGGY	2 cut(s)	266, 404
BssECI	CCNNGG	7 cut(s)	498, 538, 638, 677, 1487, 1522, 1749
BssMI	GATC	6 cut(s)	399, 1435, 1479, 1516, 1724, 1918
BssNAI	GTATAC	1 cut(s)	1720
BssNI	GRCGYC	3 cut(s)	129, 360, 695
Bst1107I	GTATAC	1 cut(s)	1720
Bst2UI	CCWGG	2 cut(s)	539, 1488
Bst4CI	ACNGT	7 cut(s)	493, 546, 808, 1022, 1099, 1936, 1971
Bst6I	CTCTTC	2 cut(s)	14, 1065
BstACI	GRCGYC	3 cut(s)	129, 360, 695
BstBI	TTCGAA	1 cut(s)	584
BstC8I	GCNNGC	3 cut(s)	429, 861, 1618
BstDEI	CTNAG	3 cut(s)	839, 1314, 1800
BstDSI	CCRYGG	2 cut(s)	498, 1749
BstF5I	GGATG	7 cut(s)	324, 581, 649, 952, 978, 1377, 1747
BstFNI	CGCG	6 cut(s)	417, 500, 531, 718, 863, 1259
BstH2I	RGCGCY	1 cut(s)	28
BstHHI	GCGC	6 cut(s)	27, 419, 531, 712, 1261, 1653
BstKTI	GATC	6 cut(s)	402, 1438, 1482, 1519, 1727, 1921
BstMAI	GTCTC	2 cut(s)	226, 499
BstMBI	GATC	6 cut(s)	399, 1435, 1479, 1516, 1724, 1918
BstMCI	CGRYCG	2 cut(s)	283, 1528
BstMWI	GCNNNNNNNGC	6 cut(s)	114, 291, 414, 526, 856, 1121
BstNI	CCWGG	2 cut(s)	539, 1488
BstNSI	RCATGY	2 cut(s)	210, 619
BstSCI	CCNGG	5 cut(s)	419, 537, 637, 676, 1486
BstSFI	CTRYAG	1 cut(s)	1644
BstSLI	GKGCMC	2 cut(s)	861, 1860
BstUI	CGCG	6 cut(s)	417, 500, 531, 718, 863, 1259
BstV1I	GCAGC	3 cut(s)	532, 1144, 1217
BstZ17I	GTATAC	1 cut(s)	1720
BstZI	CGGCCG	1 cut(s)	1525
Bsu15I	ATCGAT	1 cut(s)	1875
BsuRI	GGCC	7 cut(s)	117, 237, 270, 512, 637, 1527, 1734
BsuTUI	ATCGAT	1 cut(s)	1875
BtgI	CCRYGG	2 cut(s)	498, 1749
BtrI	CACGTC	2 cut(s)	256, 650
BtsCI	GGATG	7 cut(s)	324, 581, 649, 952, 978, 1377, 1747
BtsI	GCAGTG	1 cut(s)	1150
BtsIMutI	CAGTG	2 cut(s)	489, 1150
BveI	ACCTGC	2 cut(s)	1106, 1415
Cac8I	GCNNGC	3 cut(s)	429, 861, 1618
CaiI	CAGNNNCTG	1 cut(s)	1267
CfoI	GCGC	6 cut(s)	27, 419, 531, 712, 1261, 1653
Cfr10I	RCCGGY	2 cut(s)	266, 404
Cfr42I	CCGCGG	1 cut(s)	501
ClaI	ATCGAT	1 cut(s)	1875
CseI	GACGC	3 cut(s)	137, 368, 724
Csp6I	GTAC	3 cut(s)	1018, 1629, 1967
CviQI	GTAC	3 cut(s)	1018, 1629, 1967
DdeI	CTNAG	3 cut(s)	839, 1314, 1800
DpnI	GATC	6 cut(s)	401, 1437, 1481, 1518, 1726, 1920
DpnII	GATC	6 cut(s)	399, 1435, 1479, 1516, 1724, 1918
DrdI	GACNNNNNNGTC	2 cut(s)	287, 491
DseDI	GACNNNNNNGTC	2 cut(s)	287, 491
EaeI	YGGCCR	1 cut(s)	1525
EagI	CGGCCG	1 cut(s)	1525
Eam1104I	CTCTTC	2 cut(s)	14, 1065
EarI	CTCTTC	2 cut(s)	14, 1065
EciI	GGCGGA	1 cut(s)	89
EclXI	CGGCCG	1 cut(s)	1525
Eco147I	AGGCCT	1 cut(s)	512
Eco32I	GATATC	1 cut(s)	384
Eco47III	AGCGCT	1 cut(s)	26
Eco52I	CGGCCG	1 cut(s)	1525
Eco57I	CTGAAG	1 cut(s)	420
Eco88I	CYCGRG	2 cut(s)	524, 1010
EcoRII	CCWGG	2 cut(s)	537, 1486
EcoRV	GATATC	1 cut(s)	384
Esp3I	CGTCTC	1 cut(s)	226
FalI	AAGNNNNNCTT	3 cut(s)	28, 1323, 1355
FaqI	GGGAC	3 cut(s)	555, 817, 1908
FauI	CCCGC	1 cut(s)	1525
FauNDI	CATATG	1 cut(s)	877
FbaI	TGATCA	2 cut(s)	399, 1435
FblI	GTMKAC	1 cut(s)	1719
Fnu4HI	GCNGC	4 cut(s)	521, 1125, 1133, 1231
FokI	GGATG	7 cut(s)	311, 588, 656, 959, 985, 1384, 1754
Fsp4HI	GCNGC	4 cut(s)	521, 1125, 1133, 1231
FspBI	CTAG	6 cut(s)	1205, 1430, 1610, 1617, 1709, 1866
GlaI	GCGC	6 cut(s)	26, 418, 530, 711, 1260, 1652
GluI	GCNGC	4 cut(s)	521, 1125, 1133, 1231
GsaI	CCCAGC	1 cut(s)	1032
HaeII	RGCGCY	1 cut(s)	28
HaeIII	GGCC	7 cut(s)	117, 237, 270, 512, 637, 1527, 1734
HapII	CCGG	8 cut(s)	114, 267, 405, 420, 590, 638, 677, 1796
HgaI	GACGC	3 cut(s)	137, 368, 724
HhaI	GCGC	6 cut(s)	27, 419, 531, 712, 1261, 1653
Hin1I	GRCGYC	3 cut(s)	129, 360, 695
Hin6I	GCGC	6 cut(s)	25, 417, 529, 710, 1259, 1651
HinP1I	GCGC	6 cut(s)	25, 417, 529, 710, 1259, 1651
HincII	GTYRAC	1 cut(s)	813
HindII	GTYRAC	1 cut(s)	813
HinfI	GANTC	9 cut(s)	581, 586, 950, 1040, 1196, 1586, 1792, 1814, 1928
HpaII	CCGG	8 cut(s)	114, 267, 405, 420, 590, 638, 677, 1796
HphI	GGTGA	5 cut(s)	160, 394, 472, 1340, 1862
Hpy166II	GTNNAC	9 cut(s)	390, 674, 795, 813, 859, 1018, 1150, 1720, 1858
Hpy188I	TCNGA	4 cut(s)	470, 609, 1317, 1923
Hpy188III	TCNNGA	3 cut(s)	125, 785, 954
Hpy8I	GTNNAC	9 cut(s)	390, 674, 795, 813, 859, 1018, 1150, 1720, 1858
Hpy99I	CGWCG	4 cut(s)	131, 293, 700, 960
HpyAV	CCTTC	2 cut(s)	131, 859
HpyCH4III	ACNGT	7 cut(s)	493, 546, 808, 1022, 1099, 1936, 1971
HpyCH4IV	ACGT	5 cut(s)	255, 411, 649, 695, 797
HpyF10VI	GCNNNNNNNGC	6 cut(s)	114, 291, 414, 526, 856, 1121
HpyF3I	CTNAG	3 cut(s)	839, 1314, 1800
HpySE526I	ACGT	5 cut(s)	255, 411, 649, 695, 797
Hsp92I	GRCGYC	3 cut(s)	129, 360, 695
HspAI	GCGC	6 cut(s)	25, 417, 529, 710, 1259, 1651
Ksp22I	TGATCA	2 cut(s)	399, 1435
KspI	CCGCGG	1 cut(s)	501
Kzo9I	GATC	6 cut(s)	399, 1435, 1479, 1516, 1724, 1918
LguI	GCTCTTC	1 cut(s)	14
LmnI	GCTCC	1 cut(s)	720
Lsp1109I	GCAGC	3 cut(s)	532, 1144, 1217
LweI	GCATC	5 cut(s)	634, 750, 1254, 1735, 1758
MaeI	CTAG	6 cut(s)	1205, 1430, 1610, 1617, 1709, 1866
MaeII	ACGT	5 cut(s)	255, 411, 649, 695, 797
MaeIII	GTNAC	1 cut(s)	871
MalI	GATC	6 cut(s)	401, 1437, 1481, 1518, 1726, 1920
MboI	GATC	6 cut(s)	399, 1435, 1479, 1516, 1724, 1918
MhlI	GDGCHC	3 cut(s)	607, 861, 1860
MluCI	AATT	7 cut(s)	471, 594, 826, 1054, 1276, 1450, 1555
MlyI	GAGTC	2 cut(s)	1049, 1205
MmeI	TCCRAC	3 cut(s)	671, 1157, 1935
MroXI	GAANNNNTTC	3 cut(s)	8, 485, 1585
MseI	TTAA	9 cut(s)	885, 1050, 1209, 1341, 1362, 1460, 1559, 1785, 1881
MslI	CAYNNNNRTG	1 cut(s)	1842
MspA1I	CMGCKG	2 cut(s)	500, 655
MspI	CCGG	8 cut(s)	114, 267, 405, 420, 590, 638, 677, 1796
MspR9I	CCNGG	5 cut(s)	421, 539, 639, 678, 1488
MvaI	CCWGG	2 cut(s)	539, 1488
MvnI	CGCG	6 cut(s)	417, 500, 531, 718, 863, 1259
MwoI	GCNNNNNNNGC	6 cut(s)	114, 291, 414, 526, 856, 1121
NciI	CCSGG	3 cut(s)	421, 639, 678
NdeI	CATATG	1 cut(s)	877
NdeII	GATC	6 cut(s)	399, 1435, 1479, 1516, 1724, 1918
NheI	GCTAGC	1 cut(s)	1616
NmeAIII	GCCGAG	2 cut(s)	1503, 1597
NspI	RCATGY	2 cut(s)	210, 619
NspV	TTCGAA	1 cut(s)	584
PceI	AGGCCT	1 cut(s)	512
PciI	ACATGT	1 cut(s)	615
PciSI	GCTCTTC	1 cut(s)	14
PcsI	WCGNNNNNNNCGW	1 cut(s)	1001
PdmI	GAANNNNTTC	3 cut(s)	8, 485, 1585
PfeI	GAWTC	7 cut(s)	581, 586, 950, 1586, 1792, 1814, 1928
PkrI	GCNGC	4 cut(s)	522, 1126, 1134, 1232
PleI	GAGTC	2 cut(s)	1048, 1204
PpsI	GAGTC	2 cut(s)	1048, 1204
PscI	ACATGT	1 cut(s)	615
Psp6I	CCWGG	2 cut(s)	537, 1486
PspFI	CCCAGC	1 cut(s)	1028
PspGI	CCWGG	2 cut(s)	537, 1486
PsrI	GAACNNNNNNTAC	2 cut(s)	1816, 1848
PstI	CTGCAG	1 cut(s)	1648
PstNI	CAGNNNCTG	1 cut(s)	1267
PvuII	CAGCTG	1 cut(s)	655
RsaI	GTAC	3 cut(s)	1019, 1630, 1968
RsaNI	GTAC	3 cut(s)	1018, 1629, 1967
RseI	CAYNNNNRTG	1 cut(s)	1842
SacII	CCGCGG	1 cut(s)	501
SapI	GCTCTTC	1 cut(s)	14
SaqAI	TTAA	9 cut(s)	885, 1050, 1209, 1341, 1362, 1460, 1559, 1785, 1881
SatI	GCNGC	4 cut(s)	521, 1125, 1133, 1231
Sau3AI	GATC	6 cut(s)	399, 1435, 1479, 1516, 1724, 1918
SchI	GAGTC	2 cut(s)	1049, 1205
ScrFI	CCNGG	5 cut(s)	421, 539, 639, 678, 1488
SduI	GDGCHC	3 cut(s)	607, 861, 1860
SfaNI	GCATC	5 cut(s)	634, 750, 1254, 1735, 1758
SfcI	CTRYAG	1 cut(s)	1644
Sfr303I	CCGCGG	1 cut(s)	501
SfuI	TTCGAA	1 cut(s)	584
SgrBI	CCGCGG	1 cut(s)	501
SmiMI	CAYNNNNRTG	1 cut(s)	1842
Sse9I	AATT	7 cut(s)	471, 594, 826, 1054, 1276, 1450, 1555
SseBI	AGGCCT	1 cut(s)	512
SsiI	CCGC	7 cut(s)	100, 283, 498, 500, 718, 1124, 1532
SspI	AATATT	1 cut(s)	1347
SspMI	CTAG	6 cut(s)	1205, 1430, 1610, 1617, 1709, 1866
StuI	AGGCCT	1 cut(s)	512
StyD4I	CCNGG	5 cut(s)	419, 537, 637, 676, 1486
TaaI	ACNGT	7 cut(s)	493, 546, 808, 1022, 1099, 1936, 1971
TaiI	ACGT	5 cut(s)	258, 414, 652, 698, 800
TaqI	TCGA	7 cut(s)	126, 273, 584, 660, 955, 1295, 1875
TasI	AATT	7 cut(s)	471, 594, 826, 1054, 1276, 1450, 1555
TatI	WGTACW	2 cut(s)	1017, 1966
TauI	GCSGC	1 cut(s)	1127
TfiI	GAWTC	7 cut(s)	581, 586, 950, 1586, 1792, 1814, 1928
Tru1I	TTAA	9 cut(s)	885, 1050, 1209, 1341, 1362, 1460, 1559, 1785, 1881
Tru9I	TTAA	9 cut(s)	885, 1050, 1209, 1341, 1362, 1460, 1559, 1785, 1881
TscAI	CASTG	2 cut(s)	496, 1157
TseI	GCWGC	3 cut(s)	520, 1132, 1230
TspDTI	ATGAA	4 cut(s)	17, 125, 678, 1388
TspRI	CASTG	2 cut(s)	496, 1157
VneI	GTGCAC	2 cut(s)	857, 1856
XapI	RAATTY	5 cut(s)	826, 1054, 1276, 1450, 1555
XceI	RCATGY	2 cut(s)	210, 619
XmiI	GTMKAC	1 cut(s)	1719
XmnI	GAANNNNTTC	3 cut(s)	8, 485, 1585
XspI	CTAG	6 cut(s)	1205, 1430, 1610, 1617, 1709, 1866
ZraI	GACGTC	1 cut(s)	696

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.