Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008004

Physical Location & Seq

Genomic Coordinates Forward (+)

1706736 .. 1709360

Gene Structure 2625 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G05690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1095 bp

ATGTCTAGTAGTACCAAGAACATTCCAAAACCTCCTCCTCTTCCTTGTATTACCTACCAGCGTTTTCAATCTAGTACAAGGAAACCTTCGAGCTTAATGCGCCTTGTGCCTAAAGAAGCACTTGAAACTTGGGATAAGCTTTTCAAGGAAGGATCTGGAGCAGATACATATGTTGAAACCGATAACAAGTCTCACTTTCCTGCCCATTCAAGTGTCCTGGCTGCAGCCTCACCAGTTATAGCGACACTTCTGAATCAATCGAGGGATAAGAATGGGAATACATACCTCAAAATCCATGGAGTTCCTTGTGAAGCAGTCTACATGTTCATTAGGTTTCTATACTCTTCCTGCTACGAGGAGGAAGAAATGAAGAAGTTTGTGCTCCATTTATTGGTTCTGTCACATTGCTACTCGGTCCCATCTCTTAAAAGACTTTGTGTAGAGATTCTCGATCAAGGATGGATTAACAAGGAGAATGTGATCGATGTGCTTCAACTAGCGAGAAACTGTGACGTGACAAGGATTTGCTTTGTATGTCTTTCCATGGTCATCAAAGACTTCAAATCTGTATCTTCAACAGAGGGATGGAAAGTGATGAAACGCTCTAATCCTTTGCTCGAACAAGAGCTCATTGAGGCAGTCATCGAATCCGACAGTAGGAAACAAGAAAGAAGAAGAAAACTGGAGGAGAGAGAAGTGTATTTGCAGCTCTATGAAGCCATGGAAGCTCTTGTCCACATATGTCGTGAAGGTTGTGGGACAATTGGACCTCGCGATAAGGCCCTTAAAGGAAGCCATACCGTGTGTAAATTCCCGGCGTGTAAAGGGCTTGAAGGTGCGCTCAGACATTTCTTGGGATGCAAGTCTAGGGCTTCATGTTCTCATTGCAAAAGGATGTGGCAGCTTCTTCAGCTTCACTCTTGTATCTGTGATGATTCTAATTCTTGCAAAGTTTCTCTCTGCTGGAATTTCAAGGAGAAAATGAAGAAGCTTAGCAAGAAAGAACAATCTAAATGGCGATTGCTTGTAGAAAACATTATTAGGGCGAGGAACAGTCTCGGGCCCTTCTCGTCACGTTCTTCTGGTTTGATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000302 GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006355 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009409 GO:0009553 GO:0009555 GO:0009628 GO:0009636 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010468 GO:0010498 GO:0010556 GO:0014070 GO:0019005 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031323 GO:0031326 GO:0031461 GO:0031625 GO:0032501 GO:0032502 GO:0032991 GO:0042221 GO:0042493 GO:0042542 GO:0043161 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0046677 GO:0048229 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051246 GO:0051252 GO:0051603 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB zf-TAZ

Protein Analysis

364

Amino Acids

41.52

Weight (kDa)

9.13

Isoelectric Point (pI)

58.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	45 - 152	1.1e-13	BTB/POZ domain
zf-TAZ	PF02135	239 - 321	2.8e-10	TAZ zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008004)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05690
fragaria_vesca	FvH4_1g00430 FvH4_1g00430 FvH4_1g00430 FvH4_1g00430
malus_domestica	MD02G1003500.v1.1 MD15G1146800.v1.1
prunus_persica	Prupe.7G267800_v2.0.a1 Prupe.7G267800_v2.0.a1 Prupe.7G267800_v2.0.a1
pyrus_communis	pycom02g00200 pycom15g13160
rosa_chinensis	RchiOBHm_Chr2g0084941
rosa_laevigata	RLG00000015650
rosa_multiflora	Rmu_co8454519.1_g000001 Rmu_sc0008647.1_g000027
rosa_roxburghii	Rroxscaffold_2G00155700
rosa_rugosa	Rorug01G0457100 Rorug01G0457100
rosa_samantha	Rh2AG004800 Rh2BG006000 Rh2CG006500 Rh2DG006300
rosa_wichuraiana	Rw2G000470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	391
AccI	GTMKAC	1 cut(s)	318
AccII	CGCG	1 cut(s)	774
AclWI	GGATC	1 cut(s)	160
AcsI	RAATTY	2 cut(s)	809, 967
AcuI	CTGAAG	1 cut(s)	893
AfaI	GTAC	2 cut(s)	13, 76
AfiI	CCNNNNNNNGG	2 cut(s)	391, 657
AflIII	ACRYGT	1 cut(s)	321
AjiI	CACGTC	1 cut(s)	514
AjnI	CCWGG	1 cut(s)	216
AluBI	AGCT	8 cut(s)	93, 139, 628, 709, 728, 904, 913, 991
AluI	AGCT	8 cut(s)	93, 139, 628, 709, 728, 904, 913, 991
Alw21I	GWGCWC	2 cut(s)	384, 630
Alw26I	GTCTC	2 cut(s)	195, 1061
AlwI	GGATC	1 cut(s)	160
Ama87I	CYCGRG	1 cut(s)	1058
AoxI	GGCC	2 cut(s)	780, 1061
ApaI	GGGCCC	1 cut(s)	1065
ApeKI	GCWGC	4 cut(s)	221, 224, 706, 901
ApoI	RAATTY	2 cut(s)	809, 967
AspLEI	GCGC	2 cut(s)	102, 841
AspS9I	GGNCC	5 cut(s)	415, 767, 781, 1061, 1062
AsuC2I	CCSGG	1 cut(s)	815
AsuHPI	GGTGA	1 cut(s)	222
AvaI	CYCGRG	1 cut(s)	1058
AvaII	GGWCC	2 cut(s)	415, 767
BaeGI	GKGCMC	1 cut(s)	1065
BaeI	ACNNNNGTAYC	4 cut(s)	156, 189, 907, 940
BanII	GRGCYC	2 cut(s)	630, 1065
Bbv12I	GWGCWC	2 cut(s)	384, 630
BbvI	GCAGC	4 cut(s)	208, 236, 718, 913
BccI	CCATC	3 cut(s)	427, 453, 579
BcgI	CGANNNNNNTGC	2 cut(s)	79, 113
BciT130I	CCWGG	1 cut(s)	218
BcnI	CCSGG	1 cut(s)	815
BcoDI	GTCTC	2 cut(s)	195, 1061
BfaI	CTAG	4 cut(s)	6, 72, 497, 867
BfmI	CTRYAG	1 cut(s)	222
BisI	GCNGC	4 cut(s)	222, 225, 707, 902
BlpI	GCTNAGC	1 cut(s)	992
BlsI	GCNGC	4 cut(s)	223, 226, 708, 903
Bme1390I	CCNGG	2 cut(s)	218, 815
Bme18I	GGWCC	2 cut(s)	415, 767
BmeT110I	CYCGRG	1 cut(s)	1058
BmgBI	CACGTC	1 cut(s)	514
BmgT120I	GGNCC	5 cut(s)	415, 767, 781, 1061, 1062
BmiI	GGNNCC	2 cut(s)	417, 1063
BmrFI	CCNGG	2 cut(s)	218, 815
BmsI	GCATC	1 cut(s)	848
BpmI	CTGGAG	2 cut(s)	177, 704
Bpu1102I	GCTNAGC	1 cut(s)	992
BpuMI	CCSGG	1 cut(s)	815
Bsa29I	ATCGAT	1 cut(s)	483
BsaJI	CCNNGG	3 cut(s)	295, 543, 720
Bsc4I	CCNNNNNNNGG	2 cut(s)	391, 657
Bse1I	ACTGG	2 cut(s)	233, 687
Bse3DI	GCAATG	2 cut(s)	403, 883
BseBI	CCWGG	1 cut(s)	218
BseCI	ATCGAT	1 cut(s)	483
BseDI	CCNNGG	3 cut(s)	295, 543, 720
BseGI	GGATG	4 cut(s)	464, 590, 863, 900
BseLI	CCNNNNNNNGG	2 cut(s)	391, 657
BseMI	GCAATG	2 cut(s)	403, 883
BseMII	CTCAG	1 cut(s)	856
BseNI	ACTGG	2 cut(s)	233, 687
BseRI	GAGGAG	4 cut(s)	24, 27, 371, 701
BseSI	GKGCMC	1 cut(s)	1065
BseXI	GCAGC	4 cut(s)	208, 236, 718, 913
Bsh1236I	CGCG	1 cut(s)	774
BshFI	GGCC	2 cut(s)	782, 1063
BshVI	ATCGAT	1 cut(s)	483
BsiHKAI	GWGCWC	2 cut(s)	384, 630
BsiHKCI	CYCGRG	1 cut(s)	1058
BsiSI	CCGG	1 cut(s)	815
BslFI	GGGAC	2 cut(s)	401, 772
BslI	CCNNNNNNNGG	2 cut(s)	391, 657
BsmAI	GTCTC	2 cut(s)	195, 1061
BsmFI	GGGAC	2 cut(s)	401, 772
BsnI	GGCC	2 cut(s)	782, 1063
BsoBI	CYCGRG	1 cut(s)	1058
Bsp120I	GGGCCC	1 cut(s)	1061
Bsp1286I	GDGCHC	3 cut(s)	384, 630, 1065
Bsp143I	GATC	3 cut(s)	152, 451, 480
Bsp1720I	GCTNAGC	1 cut(s)	992
Bsp19I	CCATGG	3 cut(s)	295, 543, 720
Bsp68I	TCGCGA	1 cut(s)	774
BspANI	GGCC	2 cut(s)	782, 1063
BspCNI	CTCAG	1 cut(s)	855
BspDI	ATCGAT	1 cut(s)	483
BspFNI	CGCG	1 cut(s)	774
BspLI	GGNNCC	2 cut(s)	417, 1063
BspMAI	CTGCAG	1 cut(s)	226
BspPI	GGATC	1 cut(s)	160
BsrDI	GCAATG	2 cut(s)	403, 883
BsrI	ACTGG	2 cut(s)	233, 687
BssECI	CCNNGG	3 cut(s)	295, 543, 720
BssMI	GATC	3 cut(s)	152, 451, 480
BssT1I	CCWWGG	3 cut(s)	295, 543, 720
Bst2UI	CCWGG	1 cut(s)	218
Bst4CI	ACNGT	4 cut(s)	509, 656, 802, 1055
Bst6I	CTCTTC	2 cut(s)	45, 349
BstDEI	CTNAG	2 cut(s)	842, 992
BstDSI	CCRYGG	3 cut(s)	295, 543, 720
BstF5I	GGATG	4 cut(s)	464, 590, 863, 900
BstFNI	CGCG	1 cut(s)	774
BstHHI	GCGC	2 cut(s)	102, 841
BstKTI	GATC	3 cut(s)	155, 454, 483
BstMAI	GTCTC	2 cut(s)	195, 1061
BstMBI	GATC	3 cut(s)	152, 451, 480
BstMWI	GCNNNNNNNGC	4 cut(s)	99, 106, 725, 910
BstNI	CCWGG	1 cut(s)	218
BstNSI	RCATGY	1 cut(s)	325
BstSCI	CCNGG	2 cut(s)	216, 813
BstSFI	CTRYAG	1 cut(s)	222
BstSLI	GKGCMC	1 cut(s)	1065
BstUI	CGCG	1 cut(s)	774
BstV1I	GCAGC	4 cut(s)	208, 236, 718, 913
BstX2I	RGATCY	1 cut(s)	152
BstYI	RGATCY	1 cut(s)	152
Bsu15I	ATCGAT	1 cut(s)	483
BsuRI	GGCC	2 cut(s)	782, 1063
BsuTUI	ATCGAT	1 cut(s)	483
BtgI	CCRYGG	3 cut(s)	295, 543, 720
BtrI	CACGTC	1 cut(s)	514
BtsCI	GGATG	4 cut(s)	464, 590, 863, 900
BtuMI	TCGCGA	1 cut(s)	774
CfoI	GCGC	2 cut(s)	102, 841
Cfr13I	GGNCC	5 cut(s)	415, 767, 781, 1061, 1062
ClaI	ATCGAT	1 cut(s)	483
Csp6I	GTAC	2 cut(s)	12, 75
CviAII	CATG	5 cut(s)	296, 322, 544, 721, 876
CviQI	GTAC	2 cut(s)	12, 75
DdeI	CTNAG	2 cut(s)	842, 992
DpnI	GATC	3 cut(s)	154, 453, 482
DpnII	GATC	3 cut(s)	152, 451, 480
Eam1104I	CTCTTC	2 cut(s)	45, 349
EarI	CTCTTC	2 cut(s)	45, 349
Ecl136II	GAGCTC	1 cut(s)	628
Eco130I	CCWWGG	3 cut(s)	295, 543, 720
Eco24I	GRGCYC	2 cut(s)	630, 1065
Eco47I	GGWCC	2 cut(s)	415, 767
Eco53kI	GAGCTC	1 cut(s)	628
Eco57I	CTGAAG	1 cut(s)	893
Eco88I	CYCGRG	1 cut(s)	1058
EcoICRI	GAGCTC	1 cut(s)	628
EcoO109I	RGGNCCY	2 cut(s)	781, 1062
EcoRII	CCWGG	1 cut(s)	216
EcoT14I	CCWWGG	3 cut(s)	295, 543, 720
EcoT38I	GRGCYC	2 cut(s)	630, 1065
ErhI	CCWWGG	3 cut(s)	295, 543, 720
FaeI	CATG	5 cut(s)	299, 325, 547, 724, 879
FalI	AAGNNNNNCTT	6 cut(s)	70, 102, 105, 137, 179, 211
FaqI	GGGAC	2 cut(s)	401, 772
FatI	CATG	5 cut(s)	295, 321, 543, 720, 875
FauNDI	CATATG	2 cut(s)	169, 740
FblI	GTMKAC	1 cut(s)	318
Fnu4HI	GCNGC	4 cut(s)	222, 225, 707, 902
FokI	GGATG	4 cut(s)	471, 597, 870, 907
FriOI	GRGCYC	2 cut(s)	630, 1065
Fsp4HI	GCNGC	4 cut(s)	222, 225, 707, 902
FspBI	CTAG	4 cut(s)	6, 72, 497, 867
GlaI	GCGC	2 cut(s)	101, 840
GluI	GCNGC	4 cut(s)	222, 225, 707, 902
GsuI	CTGGAG	2 cut(s)	177, 704
HaeIII	GGCC	2 cut(s)	782, 1063
HapII	CCGG	1 cut(s)	815
HhaI	GCGC	2 cut(s)	102, 841
Hin1II	CATG	5 cut(s)	299, 325, 547, 724, 879
Hin6I	GCGC	2 cut(s)	100, 839
HinP1I	GCGC	2 cut(s)	100, 839
HindIII	AAGCTT	2 cut(s)	137, 989
HinfI	GANTC	4 cut(s)	253, 445, 647, 935
HpaII	CCGG	1 cut(s)	815
HphI	GGTGA	1 cut(s)	222
Hpy166II	GTNNAC	2 cut(s)	319, 736
Hpy188I	TCNGA	3 cut(s)	252, 652, 845
Hpy188III	TCNNGA	4 cut(s)	156, 449, 746, 773
Hpy8I	GTNNAC	2 cut(s)	319, 736
HpyAV	CCTTC	5 cut(s)	96, 143, 743, 827, 1075
HpyCH4III	ACNGT	4 cut(s)	509, 656, 802, 1055
HpyCH4IV	ACGT	2 cut(s)	513, 1075
HpyCH4V	TGCA	5 cut(s)	224, 706, 861, 888, 948
HpyF10VI	GCNNNNNNNGC	4 cut(s)	99, 106, 725, 910
HpyF3I	CTNAG	2 cut(s)	842, 992
HpySE526I	ACGT	2 cut(s)	513, 1075
Hsp92II	CATG	5 cut(s)	299, 325, 547, 724, 879
HspAI	GCGC	2 cut(s)	100, 839
Kzo9I	GATC	3 cut(s)	152, 451, 480
LmnI	GCTCC	2 cut(s)	158, 387
Lsp1109I	GCAGC	4 cut(s)	208, 236, 718, 913
LweI	GCATC	1 cut(s)	848
MaeI	CTAG	4 cut(s)	6, 72, 497, 867
MaeII	ACGT	2 cut(s)	513, 1075
MaeIII	GTNAC	4 cut(s)	399, 509, 514, 1071
MalI	GATC	3 cut(s)	154, 453, 482
MboI	GATC	3 cut(s)	152, 451, 480
MfeI	CAATTG	1 cut(s)	762
MflI	RGATCY	1 cut(s)	152
MhlI	GDGCHC	3 cut(s)	384, 630, 1065
MluCI	AATT	4 cut(s)	762, 809, 940, 967
MmeI	TCCRAC	1 cut(s)	675
MseI	TTAA	4 cut(s)	95, 426, 465, 786
MslI	CAYNNNNRTG	1 cut(s)	210
MspI	CCGG	1 cut(s)	815
MspR9I	CCNGG	2 cut(s)	218, 815
MunI	CAATTG	1 cut(s)	762
MvaI	CCWGG	1 cut(s)	218
MvnI	CGCG	1 cut(s)	774
MwoI	GCNNNNNNNGC	4 cut(s)	99, 106, 725, 910
NciI	CCSGG	1 cut(s)	815
NcoI	CCATGG	3 cut(s)	295, 543, 720
NdeI	CATATG	2 cut(s)	169, 740
NdeII	GATC	3 cut(s)	152, 451, 480
NlaIII	CATG	5 cut(s)	299, 325, 547, 724, 879
NlaIV	GGNNCC	2 cut(s)	417, 1063
NmuCI	GTSAC	4 cut(s)	399, 509, 514, 1071
NruI	TCGCGA	1 cut(s)	774
NspI	RCATGY	1 cut(s)	325
PciI	ACATGT	1 cut(s)	321
PfeI	GAWTC	4 cut(s)	253, 445, 647, 935
PflMI	CCANNNNNTGG	1 cut(s)	391
PkrI	GCNGC	4 cut(s)	223, 226, 708, 903
PscI	ACATGT	1 cut(s)	321
Psp124BI	GAGCTC	1 cut(s)	630
Psp6I	CCWGG	1 cut(s)	216
PspGI	CCWGG	1 cut(s)	216
PspN4I	GGNNCC	2 cut(s)	417, 1063
PspOMI	GGGCCC	1 cut(s)	1061
PspPI	GGNCC	5 cut(s)	415, 767, 781, 1061, 1062
PstI	CTGCAG	1 cut(s)	226
PsuI	RGATCY	1 cut(s)	152
RruI	TCGCGA	1 cut(s)	774
RsaI	GTAC	2 cut(s)	13, 76
RsaNI	GTAC	2 cut(s)	12, 75
RseI	CAYNNNNRTG	1 cut(s)	210
SacI	GAGCTC	1 cut(s)	630
SaqAI	TTAA	4 cut(s)	95, 426, 465, 786
SatI	GCNGC	4 cut(s)	222, 225, 707, 902
Sau3AI	GATC	3 cut(s)	152, 451, 480
Sau96I	GGNCC	5 cut(s)	415, 767, 781, 1061, 1062
ScrFI	CCNGG	2 cut(s)	218, 815
SduI	GDGCHC	3 cut(s)	384, 630, 1065
SfaNI	GCATC	1 cut(s)	848
SfcI	CTRYAG	1 cut(s)	222
SinI	GGWCC	2 cut(s)	415, 767
SmiMI	CAYNNNNRTG	1 cut(s)	210
Sse9I	AATT	4 cut(s)	762, 809, 940, 967
SspMI	CTAG	4 cut(s)	6, 72, 497, 867
SstI	GAGCTC	1 cut(s)	630
StyD4I	CCNGG	2 cut(s)	216, 813
StyI	CCWWGG	3 cut(s)	295, 543, 720
TaaI	ACNGT	4 cut(s)	509, 656, 802, 1055
TaiI	ACGT	2 cut(s)	516, 1078
TaqI	TCGA	6 cut(s)	89, 260, 450, 483, 618, 645
TaqII	GACCGA	1 cut(s)	403
TasI	AATT	4 cut(s)	762, 809, 940, 967
TatI	WGTACW	1 cut(s)	74
TfiI	GAWTC	4 cut(s)	253, 445, 647, 935
Tru1I	TTAA	4 cut(s)	95, 426, 465, 786
Tru9I	TTAA	4 cut(s)	95, 426, 465, 786
TseFI	GTSAC	4 cut(s)	399, 509, 514, 1071
TseI	GCWGC	4 cut(s)	221, 224, 706, 901
Tsp45I	GTSAC	4 cut(s)	399, 509, 514, 1071
TspDTI	ATGAA	6 cut(s)	316, 383, 611, 729, 864, 998
Van91I	CCANNNNNTGG	1 cut(s)	391
VpaK11BI	GGWCC	2 cut(s)	415, 767
XapI	RAATTY	2 cut(s)	809, 967
XceI	RCATGY	1 cut(s)	325
XmiI	GTMKAC	1 cut(s)	318
XspI	CTAG	4 cut(s)	6, 72, 497, 867

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.