Rh2AG004800

BTB POZ and TAZ domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
458084 .. 462914
4831 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG004800.1

Sequence Viewer

Length: 1227 bp
ATGATGGCTTCACCTGCTCTTGACTCACCCTGGCCAACCTCGACTGGCGATTCATTTTGTGGATCTTTCAATATACATATGGAGGAACAGAATCCGGCCGATATTTTACCTGTGCTGGAAGACCCGACCTCTTCTGTATCCTATAACCATAGTATCCCAAAACCACCTCCATTTCCTGGTAACACCCATGCAGGAAACAAATCTATCAAAAGGCTTTCAGAGAGTTGCTATGTTCCAAAGGAAACAATAGATACATGGGATAAACTTTTCAAAGACGGATGTGGCGCTGATGTGTATATTATCACCGAGGGCAGATCATACATTCCAGCTCATCTGAGTGTTCTGACTCTTGCGTCACCAGTGCTAGGTAATTTCCTACGGCAATCAAAAGTGCAAAACAGTATGAGATACGTTAAGATTCCTGGGGTACCTTACAAAGCTGTCTACACATTCATTCGCTTTCTTTACTCATCGTGCTATGAAAAAGAAGAGATGAAGAAATATGTACTTCATTTGTTGGTTTTGTCACACTCCTACTCAGTTCCATCACTGAAGAGAGTTTGTATATACCTTCTTGAGCAGGGATGGCTTACCAAAGAAAATGTGGTCGATGTGCTTCAATTGGCAAGGAACTGTGATGCACCACGGCTCTCTTTAATCTGTGTACGTATGGTTGTGAAGGATTTTAAGGCCATATCTTCAACTGAAGGCTGGAAAGTGATGAAACAAGTTAATCCTGCACTTGAACAAGAGCTGCTAGAGTTTGTTGTTGAAGCAGATTCTGGGAAAGAAGAGAGGTTGAAGAAAAAGGAAGAGAAAAAAGTGTACTTGCAACTGTATGAGGCGATGGAGGCCCTCCTTCACATATGCAAGGATGGATGTAGGACAATAGGGCCGCGTGACAAAGTGTTTAAAGGAGGCCAGGTTGCTTGTGGTTTTCCTGCTTGCAAGGGGCTTGAAACATTAGTTCGTCATTTCTCCAGCTGTAAAACCCGGGTACCTGGTGGCTGTGTTCACTGCAAACGCATGTGGCAGCTTCTTGAACTGCACTCTCGTATTTGCAATCAGCCTGATTCATGCAAGGTTCCTTTGTGTAGGCATTTCAAGGAGAAAATGCAGCAGCAGACCAAGAAAGATGAGGCTAAATGGAAGCTGTTGGTGAGTAAAGTGATAGCATCTAAGGATGCTCTATGGCCAATCTCTGGTCGGCGGTCAAGCTTATTATGA

Protein Analysis

408

Amino Acids

46.18

Weight (kDa)

9.03

Isoelectric Point (pI)

47.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB PF00651 88 - 194 4.3e-10 BTB/POZ domain
zf-TAZ PF02135 280 - 365 4e-12 TAZ zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 22
AasI GACNNNNNNGTC 1 cut(s) 352
Acc36I ACCTGC 1 cut(s) 22
Acc65I GGTACC 2 cut(s) 427, 997
AccB1I GGYRCC 2 cut(s) 427, 997
AccB7I CCANNNNNTGG 2 cut(s) 176, 1202
AccI GTMKAC 1 cut(s) 444
AccII CGCG 1 cut(s) 898
AciI CCGC 2 cut(s) 896, 1210
AclWI GGATC 1 cut(s) 70
AcoI YGGCCR 3 cut(s) 32, 96, 1193
AcuI CTGAAG 2 cut(s) 572, 726
AfaI GTAC 5 cut(s) 429, 507, 666, 827, 999
AfiI CCNNNNNNNGG 3 cut(s) 176, 365, 1202
AjnI CCWGG 5 cut(s) 29, 175, 421, 921, 1000
AluBI AGCT 7 cut(s) 329, 440, 754, 984, 1036, 1153, 1218
AluI AGCT 7 cut(s) 329, 440, 754, 984, 1036, 1153, 1218
AlwI GGATC 1 cut(s) 70
AlwNI CAGNNNCTG 1 cut(s) 782
Ama87I CYCGRG 1 cut(s) 993
AoxI GGCC 7 cut(s) 32, 96, 690, 852, 893, 919, 1193
ApeKI GCWGC 4 cut(s) 754, 1033, 1117, 1120
Asp718I GGTACC 2 cut(s) 427, 997
AspLEI GCGC 1 cut(s) 287
AspS9I GGNCC 2 cut(s) 853, 893
AsuC2I CCSGG 2 cut(s) 994, 995
AsuHPI GGTGA 5 cut(s) 3, 18, 295, 348, 1171
AvaI CYCGRG 1 cut(s) 993
BaeI ACNNNNGTAYC 4 cut(s) 136, 169, 981, 1014
BalI TGGCCA 2 cut(s) 34, 1195
BanI GGYRCC 2 cut(s) 427, 997
BbsI GAAGAC 1 cut(s) 126
BbvI GCAGC 4 cut(s) 741, 1045, 1129, 1132
BccI CCATC 4 cut(s) 553, 579, 841, 869
BceAI ACGGC 2 cut(s) 395, 662
BciT130I CCWGG 5 cut(s) 31, 177, 423, 923, 1002
BciVI GTATCC 2 cut(s) 148, 164
BcnI CCSGG 2 cut(s) 994, 995
BfaI CTAG 2 cut(s) 365, 758
BfoI RGCGCY 1 cut(s) 288
BfuAI ACCTGC 1 cut(s) 22
BfuI GTATCC 2 cut(s) 148, 164
BisI GCNGC 5 cut(s) 755, 896, 1034, 1118, 1121
BlsI GCNGC 5 cut(s) 756, 897, 1035, 1119, 1122
Bme1390I CCNGG 7 cut(s) 31, 177, 423, 923, 994, 995, 1002
BmeT110I CYCGRG 1 cut(s) 993
BmgT120I GGNCC 2 cut(s) 853, 893
BmiI GGNNCC 3 cut(s) 429, 999, 1086
BmrFI CCNGG 7 cut(s) 31, 177, 423, 923, 994, 995, 1002
BmsI GCATC 3 cut(s) 628, 1174, 1184
BpiI GAAGAC 1 cut(s) 126
BpmI CTGGAG 1 cut(s) 964
BpuEI CTTGAG 1 cut(s) 596
BpuMI CCSGG 2 cut(s) 994, 995
BsaAI YACGTR 1 cut(s) 668
BsaJI CCNNGG 5 cut(s) 29, 306, 422, 644, 993
BsaXI ACNNNNNCTCC 2 cut(s) 909, 939
Bsc4I CCNNNNNNNGG 3 cut(s) 176, 365, 1202
Bse1I ACTGG 2 cut(s) 49, 359
BseBI CCWGG 5 cut(s) 31, 177, 423, 923, 1002
BseDI CCNNGG 5 cut(s) 29, 306, 422, 644, 993
BseGI GGATG 5 cut(s) 284, 590, 880, 884, 1189
BseLI CCNNNNNNNGG 3 cut(s) 176, 365, 1202
BseMII CTCAG 2 cut(s) 326, 552
BseNI ACTGG 2 cut(s) 49, 359
BseX3I CGGCCG 1 cut(s) 96
BseXI GCAGC 4 cut(s) 741, 1045, 1129, 1132
BsgI GTGCAG 2 cut(s) 723, 1031
Bsh1236I CGCG 1 cut(s) 898
Bsh1285I CGRYCG 1 cut(s) 99
BshFI GGCC 7 cut(s) 34, 98, 692, 854, 895, 921, 1195
BshNI GGYRCC 2 cut(s) 427, 997
BsiEI CGRYCG 1 cut(s) 99
BsiHKCI CYCGRG 1 cut(s) 993
BsiSI CCGG 2 cut(s) 95, 994
BslI CCNNNNNNNGG 3 cut(s) 176, 365, 1202
BsnI GGCC 7 cut(s) 34, 98, 692, 854, 895, 921, 1195
BsoBI CYCGRG 1 cut(s) 993
Bsp143I GATC 2 cut(s) 62, 314
BspACI CCGC 2 cut(s) 896, 1210
BspANI GGCC 7 cut(s) 34, 98, 692, 854, 895, 921, 1195
BspCNI CTCAG 2 cut(s) 327, 551
BspFNI CGCG 1 cut(s) 898
BspLI GGNNCC 3 cut(s) 429, 999, 1086
BspMI ACCTGC 1 cut(s) 22
BspPI GGATC 1 cut(s) 70
BspT107I GGYRCC 2 cut(s) 427, 997
BsrI ACTGG 2 cut(s) 49, 359
BssECI CCNNGG 5 cut(s) 29, 306, 422, 644, 993
BssMI GATC 2 cut(s) 62, 314
Bst2UI CCWGG 5 cut(s) 31, 177, 423, 923, 1002
Bst4CI ACNGT 3 cut(s) 401, 635, 837
Bst6I CTCTTC 5 cut(s) 136, 483, 548, 786, 807
BstBAI YACGTR 1 cut(s) 668
BstC8I GCNNGC 1 cut(s) 946
BstDEI CTNAG 3 cut(s) 335, 538, 1179
BstDSI CCRYGG 1 cut(s) 644
BstF5I GGATG 5 cut(s) 284, 590, 880, 884, 1189
BstFNI CGCG 1 cut(s) 898
BstH2I RGCGCY 1 cut(s) 288
BstHHI GCGC 1 cut(s) 287
BstKTI GATC 2 cut(s) 65, 317
BstMBI GATC 2 cut(s) 62, 314
BstMCI CGRYCG 1 cut(s) 99
BstMWI GCNNNNNNNGC 3 cut(s) 14, 586, 851
BstNI CCWGG 5 cut(s) 31, 177, 423, 923, 1002
BstNSI RCATGY 1 cut(s) 1030
BstSCI CCNGG 7 cut(s) 29, 175, 421, 921, 992, 993, 1000
BstSNI TACGTA 1 cut(s) 668
BstUI CGCG 1 cut(s) 898
BstV1I GCAGC 4 cut(s) 741, 1045, 1129, 1132
BstV2I GAAGAC 1 cut(s) 126
BstX2I RGATCY 1 cut(s) 62
BstYI RGATCY 1 cut(s) 62
BstZI CGGCCG 1 cut(s) 96
BsuI GTATCC 2 cut(s) 148, 164
BsuRI GGCC 7 cut(s) 34, 98, 692, 854, 895, 921, 1195
BtgI CCRYGG 1 cut(s) 644
BtgZI GCGATG 1 cut(s) 860
BtsCI GGATG 5 cut(s) 284, 590, 880, 884, 1189
BtsI GCAGTG 1 cut(s) 1015
BtsIMutI CAGTG 3 cut(s) 366, 548, 1015
BveI ACCTGC 1 cut(s) 22
Cac8I GCNNGC 1 cut(s) 946
CaiI CAGNNNCTG 1 cut(s) 782
CfoI GCGC 1 cut(s) 287
Cfr13I GGNCC 2 cut(s) 853, 893
Cfr9I CCCGGG 1 cut(s) 993
CseI GACGC 1 cut(s) 342
CsiI ACCWGGT 1 cut(s) 1000
Csp6I GTAC 5 cut(s) 428, 506, 665, 826, 998
CviAII CATG 4 cut(s) 188, 255, 1027, 1077
CviQI GTAC 5 cut(s) 428, 506, 665, 826, 998
DdeI CTNAG 3 cut(s) 335, 538, 1179
DpnI GATC 2 cut(s) 64, 316
DpnII GATC 2 cut(s) 62, 314
DraI TTTAAA 1 cut(s) 913
DrdI GACNNNNNNGTC 1 cut(s) 352
DseDI GACNNNNNNGTC 1 cut(s) 352
EaeI YGGCCR 3 cut(s) 32, 96, 1193
EagI CGGCCG 1 cut(s) 96
Eam1104I CTCTTC 5 cut(s) 136, 483, 548, 786, 807
EarI CTCTTC 5 cut(s) 136, 483, 548, 786, 807
EclXI CGGCCG 1 cut(s) 96
Eco105I TACGTA 1 cut(s) 668
Eco52I CGGCCG 1 cut(s) 96
Eco57I CTGAAG 2 cut(s) 572, 726
Eco88I CYCGRG 1 cut(s) 993
EcoO109I RGGNCCY 1 cut(s) 853
EcoRII CCWGG 5 cut(s) 29, 175, 421, 921, 1000
FaeI CATG 4 cut(s) 191, 258, 1030, 1080
FatI CATG 4 cut(s) 187, 254, 1026, 1076
FauNDI CATATG 2 cut(s) 78, 866
FblI GTMKAC 1 cut(s) 444
Fnu4HI GCNGC 5 cut(s) 755, 896, 1034, 1118, 1121
FokI GGATG 5 cut(s) 291, 597, 887, 891, 1196
Fsp4HI GCNGC 5 cut(s) 755, 896, 1034, 1118, 1121
FspBI CTAG 2 cut(s) 365, 758
GlaI GCGC 1 cut(s) 286
GluI GCNGC 5 cut(s) 755, 896, 1034, 1118, 1121
GsuI CTGGAG 1 cut(s) 964
HaeII RGCGCY 1 cut(s) 288
HaeIII GGCC 7 cut(s) 34, 98, 692, 854, 895, 921, 1195
HapII CCGG 2 cut(s) 95, 994
HgaI GACGC 1 cut(s) 342
HhaI GCGC 1 cut(s) 287
Hin1II CATG 4 cut(s) 191, 258, 1030, 1080
Hin6I GCGC 1 cut(s) 285
HinP1I GCGC 1 cut(s) 285
HindIII AAGCTT 1 cut(s) 1216
HinfI GANTC 7 cut(s) 23, 50, 91, 346, 418, 779, 1073
HpaII CCGG 2 cut(s) 95, 994
HphI GGTGA 5 cut(s) 3, 18, 295, 348, 1171
Hpy166II GTNNAC 4 cut(s) 445, 665, 826, 1015
Hpy188I TCNGA 3 cut(s) 220, 336, 345
Hpy188III TCNNGA 3 cut(s) 20, 575, 1040
Hpy8I GTNNAC 4 cut(s) 445, 665, 826, 1015
HpyAV CCTTC 4 cut(s) 581, 673, 701, 869
HpyCH4III ACNGT 3 cut(s) 401, 635, 837
HpyCH4IV ACGT 2 cut(s) 411, 667
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 586, 851
HpyF3I CTNAG 3 cut(s) 335, 538, 1179
HpySE526I ACGT 2 cut(s) 411, 667
Hsp92II CATG 4 cut(s) 191, 258, 1030, 1080
HspAI GCGC 1 cut(s) 285
KpnI GGTACC 2 cut(s) 431, 1001
Kzo9I GATC 2 cut(s) 62, 314
Lsp1109I GCAGC 4 cut(s) 741, 1045, 1129, 1132
LweI GCATC 3 cut(s) 628, 1174, 1184
MabI ACCWGGT 1 cut(s) 1000
MaeI CTAG 2 cut(s) 365, 758
MaeII ACGT 2 cut(s) 411, 667
MaeIII GTNAC 4 cut(s) 179, 354, 525, 899
MalI GATC 2 cut(s) 64, 316
MboI GATC 2 cut(s) 62, 314
MboII GAAGA 9 cut(s) 123, 131, 500, 508, 565, 690, 803, 814, 824
MfeI CAATTG 1 cut(s) 620
MflI RGATCY 1 cut(s) 62
MlsI TGGCCA 2 cut(s) 34, 1195
MluCI AATT 2 cut(s) 370, 620
MluNI TGGCCA 2 cut(s) 34, 1195
MlyI GAGTC 2 cut(s) 17, 340
Mox20I TGGCCA 2 cut(s) 34, 1195
MscI TGGCCA 2 cut(s) 34, 1195
MseI TTAA 5 cut(s) 414, 656, 687, 732, 912
MslI CAYNNNNRTG 1 cut(s) 336
Msp20I TGGCCA 2 cut(s) 34, 1195
MspA1I CMGCKG 1 cut(s) 984
MspI CCGG 2 cut(s) 95, 994
MspR9I CCNGG 7 cut(s) 31, 177, 423, 923, 994, 995, 1002
MunI CAATTG 1 cut(s) 620
MvaI CCWGG 5 cut(s) 31, 177, 423, 923, 1002
MvnI CGCG 1 cut(s) 898
MwoI GCNNNNNNNGC 3 cut(s) 14, 586, 851
NciI CCSGG 2 cut(s) 994, 995
NdeI CATATG 2 cut(s) 78, 866
NdeII GATC 2 cut(s) 62, 314
NlaIII CATG 4 cut(s) 191, 258, 1030, 1080
NlaIV GGNNCC 3 cut(s) 429, 999, 1086
NmuCI GTSAC 3 cut(s) 354, 525, 899
NspI RCATGY 1 cut(s) 1030
PaqCI CACCTGC 1 cut(s) 22
PfeI GAWTC 5 cut(s) 50, 91, 418, 779, 1073
PflMI CCANNNNNTGG 2 cut(s) 176, 1202
PkrI GCNGC 5 cut(s) 756, 897, 1035, 1119, 1122
PleI GAGTC 2 cut(s) 17, 340
PpsI GAGTC 2 cut(s) 17, 340
Ppu21I YACGTR 1 cut(s) 668
Psp6I CCWGG 5 cut(s) 29, 175, 421, 921, 1000
PspGI CCWGG 5 cut(s) 29, 175, 421, 921, 1000
PspN4I GGNNCC 3 cut(s) 429, 999, 1086
PspPI GGNCC 2 cut(s) 853, 893
PstNI CAGNNNCTG 1 cut(s) 782
PsuI RGATCY 1 cut(s) 62
PvuII CAGCTG 1 cut(s) 984
RsaI GTAC 5 cut(s) 429, 507, 666, 827, 999
RsaNI GTAC 5 cut(s) 428, 506, 665, 826, 998
RseI CAYNNNNRTG 1 cut(s) 336
SaqAI TTAA 5 cut(s) 414, 656, 687, 732, 912
SatI GCNGC 5 cut(s) 755, 896, 1034, 1118, 1121
Sau3AI GATC 2 cut(s) 62, 314
Sau96I GGNCC 2 cut(s) 853, 893
SchI GAGTC 2 cut(s) 17, 340
ScrFI CCNGG 7 cut(s) 31, 177, 423, 923, 994, 995, 1002
SexAI ACCWGGT 1 cut(s) 1000
SfaNI GCATC 3 cut(s) 628, 1174, 1184
SmaI CCCGGG 1 cut(s) 995
SmiMI CAYNNNNRTG 1 cut(s) 336
SmlI CTYRAG 1 cut(s) 575
SmoI CTYRAG 1 cut(s) 575
SnaBI TACGTA 1 cut(s) 668
Sse9I AATT 2 cut(s) 370, 620
SsiI CCGC 2 cut(s) 896, 1210
SspMI CTAG 2 cut(s) 365, 758
StyD4I CCNGG 7 cut(s) 29, 175, 421, 921, 992, 993, 1000
TaaI ACNGT 3 cut(s) 401, 635, 837
TaiI ACGT 2 cut(s) 414, 670
TaqI TCGA 2 cut(s) 41, 609
TasI AATT 2 cut(s) 370, 620
TatI WGTACW 2 cut(s) 505, 825
TauI GCSGC 1 cut(s) 898
TfiI GAWTC 5 cut(s) 50, 91, 418, 779, 1073
Tru1I TTAA 5 cut(s) 414, 656, 687, 732, 912
Tru9I TTAA 5 cut(s) 414, 656, 687, 732, 912
TscAI CASTG 3 cut(s) 366, 555, 1022
TseFI GTSAC 3 cut(s) 354, 525, 899
TseI GCWGC 4 cut(s) 754, 1033, 1117, 1120
Tsp45I GTSAC 3 cut(s) 354, 525, 899
TspDTI ATGAA 7 cut(s) 42, 442, 495, 500, 509, 737, 1065
TspGWI ACGGA 1 cut(s) 291
TspMI CCCGGG 1 cut(s) 993
TspRI CASTG 3 cut(s) 366, 555, 1022
Van91I CCANNNNNTGG 2 cut(s) 176, 1202
XceI RCATGY 1 cut(s) 1030
XcmI CCANNNNNNNNNTGG 2 cut(s) 601, 929
XmaI CCCGGG 1 cut(s) 993
XmiI GTMKAC 1 cut(s) 444
XspI CTAG 2 cut(s) 365, 758
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.