AT1G08005

protein phosphatase binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0008361
Physical Location & Seq
Forward (+)
2485281 .. 2485724
444 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G08005.1

Sequence Viewer

Length: 168 bp
ATGCCTGACGTCAAAACCGAATCTTTGATTCCAAACGGTTCAGAAAGATCCTTCTTTGATAAGGACGTGGAATTTGTGGGAGTGGAAGCACAAGTGACAGAGAAAGGCATGGAGCAAGCGATGAAGATGAACAAGGAGATGGCTGAGGACCTAAAGACTGAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001932 GO:0001933 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005886 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006996 GO:0008150 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010563 GO:0010605 GO:0010646 GO:0010648 GO:0010921 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0017016 GO:0017048 GO:0019220 GO:0019222 GO:0019899 GO:0019902 GO:0019903 GO:0022607 GO:0023051 GO:0023057 GO:0031267 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032872 GO:0032873 GO:0035303 GO:0035304 GO:0042325 GO:0042326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043408 GO:0043409 GO:0043666 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045936 GO:0046328 GO:0046329 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051171 GO:0051172 GO:0051174 GO:0051179 GO:0051234 GO:0051246 GO:0051248 GO:0051336 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0060255 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070013 GO:0070302 GO:0070303 GO:0071840 GO:0071944 GO:0080090 GO:0080134 GO:0080135 GO:0090114 GO:1902531 GO:1902532
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SAPS

Protein Analysis

55

Amino Acids

6.25

Weight (kDa)

4.43

Isoelectric Point (pI)

56.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 12
AclWI GGATC 1 cut(s) 42
AcsI RAATTY 1 cut(s) 71
AcyI GRCGYC 1 cut(s) 9
AjiI CACGTC 1 cut(s) 67
AlwI GGATC 1 cut(s) 42
ApoI RAATTY 1 cut(s) 71
ArsI GACNNNNNNTTYG 2 cut(s) 56, 88
AspS9I GGNCC 1 cut(s) 148
AvaII GGWCC 1 cut(s) 148
BbvCI CCTCAGC 1 cut(s) 144
BccI CCATC 1 cut(s) 133
Bme18I GGWCC 1 cut(s) 148
BmgBI CACGTC 1 cut(s) 67
BmgT120I GGNCC 1 cut(s) 148
Bpu10I CCTNAGC 1 cut(s) 144
BsaHI GRCGYC 1 cut(s) 9
BseMII CTCAG 2 cut(s) 135, 150
Bsp143I GATC 1 cut(s) 47
BspCNI CTCAG 2 cut(s) 136, 151
BspPI GGATC 1 cut(s) 42
BssMI GATC 1 cut(s) 47
BssNI GRCGYC 1 cut(s) 9
Bst4CI ACNGT 1 cut(s) 38
BstACI GRCGYC 1 cut(s) 9
BstC8I GCNNGC 1 cut(s) 117
BstDEI CTNAG 2 cut(s) 144, 159
BstKTI GATC 1 cut(s) 50
BstMBI GATC 1 cut(s) 47
BstX2I RGATCY 1 cut(s) 47
BstYI RGATCY 1 cut(s) 47
BtgZI GCGATG 1 cut(s) 134
BtrI CACGTC 1 cut(s) 67
Cac8I GCNNGC 1 cut(s) 117
Cfr13I GGNCC 1 cut(s) 148
CviAII CATG 1 cut(s) 109
CviJI RGCY 1 cut(s) 143
CviKI_1 RGCY 1 cut(s) 143
DdeI CTNAG 2 cut(s) 144, 159
DpnI GATC 1 cut(s) 49
DpnII GATC 1 cut(s) 47
Eco47I GGWCC 1 cut(s) 148
EcoO109I RGGNCCY 1 cut(s) 148
FaeI CATG 1 cut(s) 112
FaiI YATR 1 cut(s) 110
FatI CATG 1 cut(s) 108
Hin1I GRCGYC 1 cut(s) 9
Hin1II CATG 1 cut(s) 112
HinfI GANTC 2 cut(s) 20, 28
Hpy188I TCNGA 1 cut(s) 43
HpyAV CCTTC 1 cut(s) 61
HpyCH4III ACNGT 1 cut(s) 38
HpyCH4IV ACGT 2 cut(s) 9, 66
HpyF3I CTNAG 2 cut(s) 144, 159
HpySE526I ACGT 2 cut(s) 9, 66
Hsp92I GRCGYC 1 cut(s) 9
Hsp92II CATG 1 cut(s) 112
Kzo9I GATC 1 cut(s) 47
LmnI GCTCC 1 cut(s) 112
LpnPI CCDG 1 cut(s) 18
MaeII ACGT 2 cut(s) 9, 66
MaeIII GTNAC 1 cut(s) 94
MalI GATC 1 cut(s) 49
MboI GATC 1 cut(s) 47
MboII GAAGA 1 cut(s) 136
MflI RGATCY 1 cut(s) 47
MluCI AATT 1 cut(s) 71
MnlI CCTC 2 cut(s) 139, 154
NdeII GATC 1 cut(s) 47
NlaIII CATG 1 cut(s) 112
NmuCI GTSAC 1 cut(s) 94
PcsI WCGNNNNNNNCGW 1 cut(s) 15
PfeI GAWTC 2 cut(s) 20, 28
PpuMI RGGWCCY 1 cut(s) 148
Psp5II RGGWCCY 1 cut(s) 148
PspPI GGNCC 1 cut(s) 148
PspPPI RGGWCCY 1 cut(s) 148
PsuI RGATCY 1 cut(s) 47
Sau3AI GATC 1 cut(s) 47
Sau96I GGNCC 1 cut(s) 148
SetI ASST 3 cut(s) 12, 69, 153
SgeI CNNG 6 cut(s) 17, 79, 104, 121, 128, 145
SinI GGWCC 1 cut(s) 148
Sse9I AATT 1 cut(s) 71
TaaI ACNGT 1 cut(s) 38
TaiI ACGT 2 cut(s) 12, 69
TasI AATT 1 cut(s) 71
TfiI GAWTC 2 cut(s) 20, 28
TseFI GTSAC 1 cut(s) 94
Tsp45I GTSAC 1 cut(s) 94
TspDTI ATGAA 2 cut(s) 137, 143
VpaK11BI GGWCC 1 cut(s) 148
XapI RAATTY 1 cut(s) 71
ZraI GACGTC 1 cut(s) 10
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.