AT1G08800

Zein-binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0007026
Physical Location & Seq
Reverse (-)
2812818 .. 2818071
5254 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G08800.3

Sequence Viewer

Length: 3342 bp
ATGGGTTCACGGAGTTTCACTAGAGCTTTGGCATTAGCCTTTAATGAGTGGCTACTGATGTTCATGCTCTTCGTTAACTCCATATTCTCTTACGTGATCGCGAGGTTTGCAGATTACTCTGAGCTTCAATCTCCATGTCTGATGTGCTCAAATCTTGATCATATTCTCAGGAGGACAAAAGATTTGAAGAAAACTCATTGGGATATTATTTGCTCTAAACACAAATCAGAGATCTCTTCATTGGTTTACTGTCATGCTCACGGCAAGCTTGTTGATGTCCGTGGAATGTGTGAGACTTGTCTTTTCTCGTTTGCTACAACCAATAAGTCCAATGCTGAAACTTACAGATTGTTGGTTGGTAAACTGGGTGAAGATTCTCACTTCGGATCCAAGAGTGATCGAAGCAAATATCCAAATTGCTCTAAGCTTACAGATTGTACATGTTGTAATCAGTTGTGGACGCCTCAAACCGCTGCTACTCAGGTGGCTGAACGGGAAATTCTACCCAAGATTGGTTTGCTTGGTAAAATAAGAACCGGGAAGCAGTCTGCGCCCAAGAAAAGTGTCAGCTTCAATCATTTGCCTGATGTTGGGTACACTGAGCTAAAGATTCATTCAGATACTGAATCAGAGGCTGTGTTTTCAGATACTGAACCAAAGCAAGAATCTTCACTTAACCATTTGCCACCTGTTGGGTACAATGAGCCCAAGATTGGTTTGGTTGGTGATGTGAGAACCGGGAAACCATCTACACCCAAGAAGAGTGTCAGCTTTAATCATTTGCCTGATGTTGGGTACACTGAGCTCAAGATTCATTCAGATACTGAATCAGAAGCTGTATTCTCAGAAGATGAATGTGTCGTCCTTAAAGATGAGGATCATAAGTATCAAATAGTGGATCTTCAGACTCATCCGATTATCACCTTGCCTTATGATTTGGCTACCGACAAGCTGCTAAACTTTGATTTCCCTTTGGAGCCCTTCGTGACTCGAAATGACCGAGAGGAAGTTCAGTTGCAAGAGACCAATTGGAGGACTTATTCCTCATTTCCTGTGCTTATTCCAGTTAATGATGTGCCTGAAACATCAGAGAAGGTGTTCAAGGAGGAAGAGATCAATTCATTAGATAATCTTTTCTTAACATCACGCGCCATGAAACATTTTGCAGCTGCAAAGGTGAAAGAAGAGCCGATTCGCCTCCAAGATATTTCCTCAACACCAGATGTTAAGGAAAATCCTGCAAATGCCTCCTTGATGGAGGAGACTGAGCTTATTTGTCTCAGTGATGTTACTGCAACATCAGGCGCCATGGAACATTCTGAAGTTATTCTAAAGGAAAGAGAAGAACTGATTCACCTCCAAGATATTTCTGTAACACCAGATTTTAAGGAAAATCCTGCAAATGCCTCCTTATTGGAGGAGACTGAGCTTATCTGTCTCAATGATGTTACTTCACCATTACGCGCCGTGGAACATTCTGCAGTTCTTTTAAAGGATAAAGTAGAGCCGATTCGCCTCCAAGATGGTGGTTCTTTAACACCAGATTTTATGGAAAATTCTGCAAATGCCTCCATATTGGAAGAGACTGAGCTTATTTGCGTCAATGATGTTACTTCAACATCACGCACCATGGGACATTCTTCAGTTGTTTTAAAGGAGAATGAAGAGCCGATTCGCTTCCAAGATAGTTCTTTAACACCAGATTTTAAGGAAAATCCTGCAAGTACCTTCTTAGTGGAGGAGACTGAGCTTATCTGCCTCAATGATGTTACTTCACCATCACGCGCCATGGAACATTCCACAGTTTTTATAGAGGAGAAAGAAGAGCTGGTTCGCCACCAAAATATTACATTAACACAGGATTTTATGGAAAATCCGGCAAATTCCTCCTTAAGGGAAGAAACTGAGCTTATTTGCCTCAATGATGTTACTTCAACATCAGAGGTTGCTGAAACTCCTGAAGATGTCTTAGAGGGAATTGAACTTATGTCAATCCATGATATATCTCTAGACGAGGTTTCTGAATCAGTCACTACAAATCAAACCTCTGTTGAGATTTCAAAGGAGAGGGACACTGACCAAGCTGATATTACCTCTCTGGAATCTGAATATATAGTTGTACCATCTCCAAATTCCATGCCTGAAAATTCAACCGATAATTGTGTATCAGATAAAAAGGAAATGAAAGAGACATCTCTTAGGATCTCTTCATTGTCTGAAATGGCTCCACGGGACGTCACTTCTCACACAGAAGCAGCTCTTGAGTCAGAATCTTCTTCCTTCAACTCAATGTCAGTGGCAGCAGAAACAAACCAATATTCAGGTGAATTACTGGATCTTGCAGATGCATACAATATCGTTGTAGGAAACGAAGGTCACTATGATAGTAATGGAAGACAACAAATAGAGAATTGGATGAAGAAAGATACGTCTAGAGTTAGCGAAGACCTTAAAGCACTTCTTACTCAAATATCAGCTTCTCGTGGGATAGAGTTTTTGTCACCTAGAGATGTAAGCCCCAAGATTTCTGTTAACAGTAGCGATCAAGAGACAAAGAACCTAGATCATGATATGCAGCTGCTACTTCAAAAGAGAATGCTTGAAAGGAACGAGAGTAACTTATCGTTGGAAGGAGTTTCTGTGACTGAAATCGAGGGTGAAAGTGAGGGTGATCGGTTGAAAAGACAGGTTGATTATGATAGGAAACTGCTGACTGGTTTATATAAAGAATTGGAGGAAGAAAGAAGCGCTTCAGCGGTTGCTACAAATCAAGCAATGGCTATGATAACGAGGTTGCAGGAAGAGAAGGCGTCATTCCAAATGGAGGCTTTGCAGAACCTGAGGATGATGGAGGAGCAAGCAGAGTACGATATGGAAGCAATACAGAGACTGAATGATTTACTTGTTGAGAGAGAAAAACTAATACAAGATTTAGAAGCTGAGATTGAATACTTCCGGGACCAGACCCCTCAGAAGAAGAATAAGCTAGATGTTGCAGAAAAAGTGACCGAGATGGATTCCCCTAGTGAGGGAATGAGCAACAAGATACAGAGTTGTTTAGTTGGGTTCGACGAAGAGAGATTATACATCACCAGTTGTCTGGAGAAGATTGAAAACAGAGTAAATGGCAAGGCTCATGACGATAATCTACCAGCACAAGAATCTGTTTCTGAGCTACATGAGAGAGTAGAAAGGCTGAAGGGAGACTTATACTTCCTAGAACAAGTTATGAATTCTCTTGGCCATGGAAATGAAGGCGTGCAATTTGTAAAGGAAATAGCTTCTCATTTGCAAACTCTGCGGAGTCTCAGCATGAAAAGACAAGATCAGACTGAGTGTTGA

Protein Analysis

1113

Amino Acids

125.43

Weight (kDa)

4.68

Isoelectric Point (pI)

49.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zein-binding PF04576 892 - 982 1.8e-30 Zein-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2238
AccB1I GGYRCC 1 cut(s) 1304
AccB7I CCANNNNNTGG 1 cut(s) 692
AccII CGCG 4 cut(s) 101, 1149, 1464, 1785
AciI CCGC 3 cut(s) 471, 2756, 3301
AclWI GGATC 6 cut(s) 381, 394, 885, 906, 2210, 2343
AcoI YGGCCR 1 cut(s) 3241
AcsI RAATTY 6 cut(s) 498, 1555, 1882, 2131, 2146, 3232
AcuI CTGAAG 6 cut(s) 887, 1341, 1626, 1980, 2736, 3218
AcyI GRCGYC 4 cut(s) 461, 1305, 2235, 2810
AfaI GTAC 7 cut(s) 439, 596, 698, 797, 1726, 2121, 2867
AfeI AGCGCT 1 cut(s) 2749
AflII CTTAAG 1 cut(s) 1891
AflIII ACRYGT 1 cut(s) 440
Alw21I GWGCWC 2 cut(s) 149, 807
AlwI GGATC 6 cut(s) 381, 394, 885, 906, 2210, 2343
AlwNI CAGNNNCTG 7 cut(s) 623, 635, 650, 824, 836, 2839, 2890
Aor51HI AGCGCT 1 cut(s) 2749
AoxI GGCC 1 cut(s) 3241
ApeKI GCWGC 8 cut(s) 473, 952, 1166, 1169, 2255, 2300, 2575, 2578
ApoI RAATTY 6 cut(s) 498, 1555, 1882, 2131, 2146, 3232
ArsI GACNNNNNNTTYG 2 cut(s) 166, 198
Asp700I GAANNNNTTC 4 cut(s) 1097, 1326, 1350, 2749
AspLEI GCGC 6 cut(s) 553, 1151, 1307, 1466, 1787, 2750
AspS9I GGNCC 1 cut(s) 2959
AsuC2I CCSGG 3 cut(s) 538, 739, 2957
AvaII GGWCC 1 cut(s) 2959
AxyI CCTNAGG 1 cut(s) 2840
BalI TGGCCA 1 cut(s) 3243
BamHI GGATCC 1 cut(s) 386
BanI GGYRCC 1 cut(s) 1304
BanII GRGCYC 3 cut(s) 708, 807, 981
BauI CACGAG 1 cut(s) 2481
BbsI GAAGAC 2 cut(s) 2401, 2451
Bbv12I GWGCWC 2 cut(s) 149, 807
BbvI GCAGC 8 cut(s) 460, 939, 1156, 1178, 2267, 2312, 2565, 2587
BccI CCATC 7 cut(s) 754, 1249, 1517, 1786, 2131, 2842, 3007
BceAI ACGGC 2 cut(s) 277, 1451
BclI TGATCA 1 cut(s) 157
BcnI CCSGG 3 cut(s) 538, 739, 2957
BfaI CTAG 8 cut(s) 21, 2009, 2433, 2505, 2561, 2987, 3024, 3218
BfmI CTRYAG 1 cut(s) 1479
BfoI RGCGCY 2 cut(s) 1308, 2751
BfrI CTTAAG 1 cut(s) 1891
BglII AGATCT 1 cut(s) 231
BisI GCNGC 8 cut(s) 474, 953, 1167, 1170, 2256, 2301, 2576, 2579
BlsI GCNGC 8 cut(s) 475, 954, 1168, 1171, 2257, 2302, 2577, 2580
Bme1390I CCNGG 3 cut(s) 538, 739, 2957
Bme18I GGWCC 1 cut(s) 2959
BmgT120I GGNCC 1 cut(s) 2959
BmiI GGNNCC 5 cut(s) 388, 978, 1306, 2226, 2960
BmrFI CCNGG 3 cut(s) 538, 739, 2957
BmrI ACTGGG 1 cut(s) 374
BmsI GCATC 1 cut(s) 2335
BmuI ACTGGG 1 cut(s) 374
BpiI GAAGAC 2 cut(s) 2401, 2451
BpmI CTGGAG 1 cut(s) 3122
BpuEI CTTGAG 2 cut(s) 791, 2282
BpuMI CCSGG 3 cut(s) 538, 739, 2957
BsaAI YACGTR 1 cut(s) 94
BsaBI GATNNNNATC 1 cut(s) 876
BsaHI GRCGYC 4 cut(s) 461, 1305, 2235, 2810
BsaI GGTCTC 1 cut(s) 1016
BsaJI CCNNGG 7 cut(s) 280, 1308, 1467, 1629, 1788, 2228, 3244
BsaXI ACNNNNNCTCC 2 cut(s) 2625, 2655
Bse1I ACTGG 5 cut(s) 369, 1064, 2337, 2719, 3093
Bse21I CCTNAGG 1 cut(s) 2840
Bse3DI GCAATG 1 cut(s) 2781
Bse8I GATNNNNATC 1 cut(s) 876
BseDI CCNNGG 7 cut(s) 280, 1308, 1467, 1629, 1788, 2228, 3244
BseGI GGATG 3 cut(s) 910, 2421, 2850
BseJI GATNNNNATC 1 cut(s) 876
BseMI GCAATG 1 cut(s) 2781
BseNI ACTGG 5 cut(s) 369, 1064, 2337, 2719, 3093
BseRI GAGGAG 5 cut(s) 1274, 1433, 1754, 1829, 2867
BseXI GCAGC 8 cut(s) 460, 939, 1156, 1178, 2267, 2312, 2565, 2587
Bsh1236I CGCG 4 cut(s) 101, 1149, 1464, 1785
BshFI GGCC 1 cut(s) 3243
BshNI GGYRCC 1 cut(s) 1304
BsiHKAI GWGCWC 2 cut(s) 149, 807
BsiSI CCGG 4 cut(s) 537, 738, 1877, 2956
BslFI GGGAC 4 cut(s) 1647, 2084, 2246, 2972
BsmFI GGGAC 4 cut(s) 1647, 2084, 2246, 2972
BsmI GAATGC 1 cut(s) 2601
BsnI GGCC 1 cut(s) 3243
Bso31I GGTCTC 1 cut(s) 1016
Bsp1286I GDGCHC 4 cut(s) 149, 708, 807, 981
Bsp1407I TGTACA 1 cut(s) 437
Bsp19I CCATGG 4 cut(s) 1308, 1629, 1788, 3244
Bsp68I TCGCGA 1 cut(s) 101
BspACI CCGC 3 cut(s) 471, 2756, 3301
BspANI GGCC 1 cut(s) 3243
BspFNI CGCG 4 cut(s) 101, 1149, 1464, 1785
BspHI TCATGA 2 cut(s) 2566, 3136
BspLI GGNNCC 5 cut(s) 388, 978, 1306, 2226, 2960
BspMAI CTGCAG 1 cut(s) 1483
BspPI GGATC 6 cut(s) 381, 394, 885, 906, 2210, 2343
BspQI GCTCTTC 4 cut(s) 74, 1179, 1659, 1818
BspT107I GGYRCC 1 cut(s) 1304
BspTI CTTAAG 1 cut(s) 1891
BspTNI GGTCTC 1 cut(s) 1016
BsrDI GCAATG 1 cut(s) 2781
BsrGI TGTACA 1 cut(s) 437
BsrI ACTGG 5 cut(s) 369, 1064, 2337, 2719, 3093
BssECI CCNNGG 7 cut(s) 280, 1308, 1467, 1629, 1788, 2228, 3244
BssNI GRCGYC 4 cut(s) 461, 1305, 2235, 2810
BssSI CACGAG 1 cut(s) 2481
BssT1I CCWWGG 4 cut(s) 1308, 1629, 1788, 3244
Bst2BI CACGAG 1 cut(s) 2481
Bst4CI ACNGT 3 cut(s) 251, 1804, 2537
BstACI GRCGYC 4 cut(s) 461, 1305, 2235, 2810
BstAFI CTTAAG 1 cut(s) 1891
BstAPI GCANNNNNTGC 1 cut(s) 3298
BstAUI TGTACA 1 cut(s) 437
BstBAI YACGTR 1 cut(s) 94
BstC8I GCNNGC 3 cut(s) 266, 2859, 3260
BstDSI CCRYGG 7 cut(s) 280, 1308, 1467, 1629, 1788, 2228, 3244
BstENI CCTNNNNNAGG 1 cut(s) 1891
BstF5I GGATG 3 cut(s) 910, 2421, 2850
BstFNI CGCG 4 cut(s) 101, 1149, 1464, 1785
BstH2I RGCGCY 2 cut(s) 1308, 2751
BstHHI GCGC 6 cut(s) 553, 1151, 1307, 1466, 1787, 2750
BstMWI GCNNNNNNNGC 3 cut(s) 107, 550, 3298
BstNSI RCATGY 1 cut(s) 444
BstSCI CCNGG 3 cut(s) 536, 737, 2955
BstSFI CTRYAG 1 cut(s) 1479
BstUI CGCG 4 cut(s) 101, 1149, 1464, 1785
BstV1I GCAGC 8 cut(s) 460, 939, 1156, 1178, 2267, 2312, 2565, 2587
BstV2I GAAGAC 2 cut(s) 2401, 2451
BstX2I RGATCY 5 cut(s) 231, 386, 898, 2202, 2335
BstXI CCANNNNNNTGG 2 cut(s) 1526, 3100
BstYI RGATCY 5 cut(s) 231, 386, 898, 2202, 2335
Bsu36I CCTNAGG 1 cut(s) 2840
BsuRI GGCC 1 cut(s) 3243
BtgI CCRYGG 7 cut(s) 280, 1308, 1467, 1629, 1788, 2228, 3244
BtsCI GGATG 3 cut(s) 910, 2421, 2850
BtsIMutI CAGTG 5 cut(s) 597, 798, 1288, 2073, 2301
BtuMI TCGCGA 1 cut(s) 101
Cac8I GCNNGC 3 cut(s) 266, 2859, 3260
CaiI CAGNNNCTG 7 cut(s) 623, 635, 650, 824, 836, 2839, 2890
CciI TCATGA 2 cut(s) 2566, 3136
CfoI GCGC 6 cut(s) 553, 1151, 1307, 1466, 1787, 2750
Cfr13I GGNCC 1 cut(s) 2959
CseI GACGC 3 cut(s) 469, 1588, 2799
Csp6I GTAC 7 cut(s) 438, 595, 697, 796, 1725, 2120, 2866
CspCI CAANNNNNGTGG 2 cut(s) 2277, 2312
CviQI GTAC 7 cut(s) 438, 595, 697, 796, 1725, 2120, 2866
DinI GGCGCC 1 cut(s) 1306
DraI TTTAAA 2 cut(s) 1491, 1653
EaeI YGGCCR 1 cut(s) 3241
Ecl136II GAGCTC 1 cut(s) 805
Eco130I CCWWGG 4 cut(s) 1308, 1629, 1788, 3244
Eco24I GRGCYC 3 cut(s) 708, 807, 981
Eco31I GGTCTC 1 cut(s) 1016
Eco47I GGWCC 1 cut(s) 2959
Eco47III AGCGCT 1 cut(s) 2749
Eco53kI GAGCTC 1 cut(s) 805
Eco57I CTGAAG 6 cut(s) 887, 1341, 1626, 1980, 2736, 3218
Eco81I CCTNAGG 1 cut(s) 2840
EcoICRI GAGCTC 1 cut(s) 805
EcoNI CCTNNNNNAGG 1 cut(s) 1891
EcoRI GAATTC 1 cut(s) 3232
EcoT14I CCWWGG 4 cut(s) 1308, 1629, 1788, 3244
EcoT22I ATGCAT 1 cut(s) 2350
EcoT38I GRGCYC 3 cut(s) 708, 807, 981
EgeI GGCGCC 1 cut(s) 1306
EheI GGCGCC 1 cut(s) 1306
ErhI CCWWGG 4 cut(s) 1308, 1629, 1788, 3244
FalI AAGNNNNNCTT 8 cut(s) 2244, 2276, 2445, 2477, 2734, 2766, 3191, 3223
FaqI GGGAC 4 cut(s) 1647, 2084, 2246, 2972
FbaI TGATCA 1 cut(s) 157
Fnu4HI GCNGC 8 cut(s) 474, 953, 1167, 1170, 2256, 2301, 2576, 2579
FokI GGATG 3 cut(s) 897, 2428, 2857
FriOI GRGCYC 3 cut(s) 708, 807, 981
Fsp4HI GCNGC 8 cut(s) 474, 953, 1167, 1170, 2256, 2301, 2576, 2579
FspBI CTAG 8 cut(s) 21, 2009, 2433, 2505, 2561, 2987, 3024, 3218
GlaI GCGC 6 cut(s) 552, 1150, 1306, 1465, 1786, 2749
GluI GCNGC 8 cut(s) 474, 953, 1167, 1170, 2256, 2301, 2576, 2579
GsuI CTGGAG 1 cut(s) 3122
HaeII RGCGCY 2 cut(s) 1308, 2751
HaeIII GGCC 1 cut(s) 3243
HapII CCGG 4 cut(s) 537, 738, 1877, 2956
HgaI GACGC 3 cut(s) 469, 1588, 2799
HhaI GCGC 6 cut(s) 553, 1151, 1307, 1466, 1787, 2750
Hin1I GRCGYC 4 cut(s) 461, 1305, 2235, 2810
Hin6I GCGC 6 cut(s) 551, 1149, 1305, 1464, 1785, 2748
HinP1I GCGC 6 cut(s) 551, 1149, 1305, 1464, 1785, 2748
HincII GTYRAC 2 cut(s) 76, 2533
HindII GTYRAC 2 cut(s) 76, 2533
HindIII AAGCTT 2 cut(s) 266, 425
HpaI GTTAAC 2 cut(s) 76, 2533
HpaII CCGG 4 cut(s) 537, 738, 1877, 2956
Hpy166II GTNNAC 8 cut(s) 8, 76, 247, 362, 459, 597, 798, 2533
Hpy8I GTNNAC 8 cut(s) 8, 76, 247, 362, 459, 597, 798, 2533
Hpy99I CGWCG 1 cut(s) 3074
HpyAV CCTTC 9 cut(s) 991, 1087, 1738, 2290, 2366, 2624, 2800, 3193, 3248
HpyCH4III ACNGT 3 cut(s) 251, 1804, 2537
HpyCH4IV ACGT 3 cut(s) 93, 2235, 2429
HpyF10VI GCNNNNNNNGC 3 cut(s) 107, 550, 3298
HpySE526I ACGT 3 cut(s) 93, 2235, 2429
Hsp92I GRCGYC 4 cut(s) 461, 1305, 2235, 2810
HspAI GCGC 6 cut(s) 551, 1149, 1305, 1464, 1785, 2748
KasI GGCGCC 1 cut(s) 1304
Ksp22I TGATCA 1 cut(s) 157
KspAI GTTAAC 2 cut(s) 76, 2533
LguI GCTCTTC 4 cut(s) 74, 1179, 1659, 1818
LmnI GCTCC 3 cut(s) 976, 2230, 2854
Lsp1109I GCAGC 8 cut(s) 460, 939, 1156, 1178, 2267, 2312, 2565, 2587
LweI GCATC 1 cut(s) 2335
MaeI CTAG 8 cut(s) 21, 2009, 2433, 2505, 2561, 2987, 3024, 3218
MaeII ACGT 3 cut(s) 93, 2235, 2429
MfeI CAATTG 1 cut(s) 1027
MflI RGATCY 5 cut(s) 231, 386, 898, 2202, 2335
MhlI GDGCHC 4 cut(s) 149, 708, 807, 981
MlsI TGGCCA 1 cut(s) 3243
MluNI TGGCCA 1 cut(s) 3243
Mly113I GGCGCC 1 cut(s) 1305
MlyI GAGTC 4 cut(s) 901, 982, 2273, 3313
MmeI TCCRAC 1 cut(s) 2607
Mox20I TGGCCA 1 cut(s) 3243
Mph1103I ATGCAT 1 cut(s) 2350
MroXI GAANNNNTTC 4 cut(s) 1097, 1326, 1350, 2749
MscI TGGCCA 1 cut(s) 3243
MslI CAYNNNNRTG 1 cut(s) 3249
Msp20I TGGCCA 1 cut(s) 3243
MspA1I CMGCKG 4 cut(s) 473, 1169, 2578, 2756
MspCI CTTAAG 1 cut(s) 1891
MspI CCGG 4 cut(s) 537, 738, 1877, 2956
MspR9I CCNGG 3 cut(s) 538, 739, 2957
MunI CAATTG 1 cut(s) 1027
Mva1269I GAATGC 1 cut(s) 2601
MvnI CGCG 4 cut(s) 101, 1149, 1464, 1785
MwoI GCNNNNNNNGC 3 cut(s) 107, 550, 3298
NarI GGCGCC 1 cut(s) 1305
NciI CCSGG 3 cut(s) 538, 739, 2957
NcoI CCATGG 4 cut(s) 1308, 1629, 1788, 3244
NlaIV GGNNCC 5 cut(s) 388, 978, 1306, 2226, 2960
NmuCI GTSAC 7 cut(s) 985, 2029, 2236, 2375, 2499, 2641, 3004
NruI TCGCGA 1 cut(s) 101
NsiI ATGCAT 1 cut(s) 2350
NspI RCATGY 1 cut(s) 444
PagI TCATGA 2 cut(s) 2566, 3136
PciI ACATGT 1 cut(s) 440
PciSI GCTCTTC 4 cut(s) 74, 1179, 1659, 1818
PcsI WCGNNNNNNNCGW 1 cut(s) 997
PctI GAATGC 1 cut(s) 2601
PdmI GAANNNNTTC 4 cut(s) 1097, 1326, 1350, 2749
PflMI CCANNNNNTGG 1 cut(s) 692
PfoI TCCNGGA 1 cut(s) 2955
PkrI GCNGC 8 cut(s) 475, 954, 1168, 1171, 2257, 2302, 2577, 2580
PleI GAGTC 4 cut(s) 901, 982, 2272, 3312
PluTI GGCGCC 1 cut(s) 1308
PpsI GAGTC 4 cut(s) 901, 982, 2272, 3312
Ppu21I YACGTR 1 cut(s) 94
PscI ACATGT 1 cut(s) 440
Psp124BI GAGCTC 1 cut(s) 807
PspN4I GGNNCC 5 cut(s) 388, 978, 1306, 2226, 2960
PspPI GGNCC 1 cut(s) 2959
PstI CTGCAG 1 cut(s) 1483
PstNI CAGNNNCTG 7 cut(s) 623, 635, 650, 824, 836, 2839, 2890
PsuI RGATCY 5 cut(s) 231, 386, 898, 2202, 2335
PvuII CAGCTG 2 cut(s) 1169, 2578
RruI TCGCGA 1 cut(s) 101
RsaI GTAC 7 cut(s) 439, 596, 698, 797, 1726, 2121, 2867
RsaNI GTAC 7 cut(s) 438, 595, 697, 796, 1725, 2120, 2866
RseI CAYNNNNRTG 1 cut(s) 3249
SacI GAGCTC 1 cut(s) 807
SapI GCTCTTC 4 cut(s) 74, 1179, 1659, 1818
SatI GCNGC 8 cut(s) 474, 953, 1167, 1170, 2256, 2301, 2576, 2579
Sau96I GGNCC 1 cut(s) 2959
SchI GAGTC 4 cut(s) 901, 982, 2273, 3313
ScrFI CCNGG 3 cut(s) 538, 739, 2957
SduI GDGCHC 4 cut(s) 149, 708, 807, 981
SfaNI GCATC 1 cut(s) 2335
SfcI CTRYAG 1 cut(s) 1479
SfoI GGCGCC 1 cut(s) 1306
SinI GGWCC 1 cut(s) 2959
SmiMI CAYNNNNRTG 1 cut(s) 3249
SmlI CTYRAG 3 cut(s) 806, 1891, 2261
SmoI CTYRAG 3 cut(s) 806, 1891, 2261
SsiI CCGC 3 cut(s) 471, 2756, 3301
SspDI GGCGCC 1 cut(s) 1304
SspI AATATT 2 cut(s) 1846, 2318
SspMI CTAG 8 cut(s) 21, 2009, 2433, 2505, 2561, 2987, 3024, 3218
SstI GAGCTC 1 cut(s) 807
StyD4I CCNGG 3 cut(s) 536, 737, 2955
StyI CCWWGG 4 cut(s) 1308, 1629, 1788, 3244
TaaI ACNGT 3 cut(s) 251, 1804, 2537
TaiI ACGT 3 cut(s) 96, 2238, 2432
TaqI TCGA 4 cut(s) 400, 991, 2652, 3069
TaqII GACCGA 2 cut(s) 1014, 3023
TatI WGTACW 1 cut(s) 437
TscAI CASTG 5 cut(s) 604, 805, 1288, 2080, 2301
TseFI GTSAC 7 cut(s) 985, 2029, 2236, 2375, 2499, 2641, 3004
TseI GCWGC 8 cut(s) 473, 952, 1166, 1169, 2255, 2300, 2575, 2578
Tsp45I GTSAC 7 cut(s) 985, 2029, 2236, 2375, 2499, 2641, 3004
TspGWI ACGGA 2 cut(s) 25, 269
TspRI CASTG 5 cut(s) 604, 805, 1288, 2080, 2301
Van91I CCANNNNNTGG 1 cut(s) 692
Vha464I CTTAAG 1 cut(s) 1891
VpaK11BI GGWCC 1 cut(s) 2959
XagI CCTNNNNNAGG 1 cut(s) 1891
XapI RAATTY 6 cut(s) 498, 1555, 1882, 2131, 2146, 3232
XbaI TCTAGA 2 cut(s) 2008, 2432
XceI RCATGY 1 cut(s) 444
XcmI CCANNNNNNNNNTGG 1 cut(s) 715
XmnI GAANNNNTTC 4 cut(s) 1097, 1326, 1350, 2749
XspI CTAG 8 cut(s) 21, 2009, 2433, 2505, 2561, 2987, 3024, 3218
ZraI GACGTC 1 cut(s) 2236
Zsp2I ATGCAT 1 cut(s) 2350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.