RchiOBHm_Chr3g0450371

Zein-binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0007026
Physical Location & Seq
Reverse (-)
1931314 .. 1935815
4502 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41771

Sequence Viewer

Length: 2778 bp
ATGGCTGCCCCGGGGACTATGTCTACTAATCATCACAAAGTTCCTTGGGGTCCAGCATTGGTGTCAGCTAGTCTCGAGTGGTTACTGATTTTTATGCTGGTTGTGGATGCCATATTCTCATATGTAATTACGAAGTTTGCTCATTACTGGGGATTGCAAACACCATGCCTCCTGTGCTCCAGACTTGATCATGTCTTGGGCAATGAAAAACCAGGTTATTATTGGGACTTGATCTGCGGCAGTCATAAGTCAGAGATTTCCTCCTTAGTTCTTTGTCGTGCACACAACAAGCTTGTAGATGTTAATGGAATGTGTGAAAGTTGCCTATTCTCTTATGCAACCATTAATAGATCCAATGCTGAGACATACAGGTTATTGGTGGGCAAGTTGGGGGAAGCTCCTAATTCTAAGGCTGACCATGAGATTGAGGACCCAGTACTTGGGGGCCAATATTTTTGCTTTTCCGGCAGAGCACATTGTTCTTGTTGCAATGAGCCACAAATTTCTGAGGGGTATTCTCATAAGTTGATTCACTCTAAATTGTTTGGGTCTGAGGCTGAACTTGAGCCCCTATCTGGTGCTATTAGACAAAACCCTGAAGAACTGAGGAAGGCACAAGATAAATCATCTAAGTCATTGAGAGCTTCTCATTTGAGAGATACTGGGCTCCCTTTATCTCATGTTGGATACACAGAGCTCAAAGGTTCTGACACTGAATCAGAAGTTCATTTTTCTGACGGGGAGGATGCAAGTGCTTCAATTCATGAAAAGGGAAAAGGTGTTGAACCTCGTACTATTACTCCGGTTCTGATAGATCCACCTTCAGTGTCCAAGACTTTAGTTTCAGCATCAGAGATGACATTAGATAATAGGGAGTCCCATGGTAATACATCTGCTCGTGTGAGAGATATTAGGCTTCATGCTTTATCTCATGTTGGATACACAGAGCTTAAGGTCACTTCAGATACTGAATCGGAAGTTCATTTCTCTGATGATGATTATGCAGGTTCTCTGACTCATGAAATGGATGGTCCCAAGGAAGATTCCTCTGCTCAAGCTGTTGAGCCTCATGTTATTCCTCAAGTACTAACAGATCCACCATCTGTGTCCAAGCCCTCACTTTTGGTATCACAGGCACAAATAGATCGTATAGAGTCCCTAGGTAGTACATCTGTAGCATCTGCAGTTACTATTGGTCATGGATTGGAGGAACTTAACTTGAAAGAAGCTAGAAGAACACCTGATTATCATGCCTTATCTGAACCACTACTTGAGAATGCCTCTCCATCATCAAAGGCAATGGAAGCCCCAGTTGAAGTATCAAAGAGAAGCTTAGATGTTACAGGAACTCGTGAAATTGATCAAGCATATGTAGCAGAATCTGGGGAATTTCACAAGAGAGCTGTCAGGCCACTTAAAACATCTGAAGTACGTTTAGAAACAAACGCAGTTTCAAGCAACACTGATCAGCAAGTGGTTAATGTTTTAGATCTCGGTGATGCTTATAAGATCGTTGTTGGTAGTCAAGGAAGACAATTGCCAGGTGTACTTGCGGAACAATGGATTGGAAAGGACTCTTCAAGAGTTACTGAAGATTTGAAGATCCTGTTGTCACAATTGTCTGCCAATCGAGGGATTGAGCAATCAACAAATGAAATTATCAGTCCAACAAATAGTGGTGATCTGAAAACTATGGGGATGCAGATACGTCAACAGAGGATTTCACTAGAAAGAAATGAGTCTGGGTTGTCTATTGATGGGAGCACTGTCAGTGAAATTGAGGGTGAGAGTATGCTTGATCGATTAAAACGACAGGTTGAGCATGACAAGAAACTTTTGAGTTCTTTGTACAAGGAGTTGGAGGAAGAAAGAAATGCTTCTGCGATTTCTTCAGATCAAGCAATGGCCATGATTACAAGGCTGCAAGAGGAGAAGGCGGCACTTCATATGGAAGCACTTCAGTCCCTAAGAATGATGGAAGAGCAAGCTGAGTATGATAATGAAGCACTGCATAAGATAGATGACCTTCTTGCTGAAAAGGAGAAGGAAGTACAAGATCTAGAAGCAGAGCTAGAATTTTACAGGATTAAGTACCCAAATGAATCAATGCTAGAGTGTCTGGGAGAGACAACTTCTGATATGCAGGCTAGGGATATTTTGGTTGATCATTCAGTACCTAGCAGCCTTGCAGAGAGTCATAAAAATACGGATGCTAGAAAGCCTTGTACAGACAGTGAAGATGGGGGAGTGGGGATGATTCTCAGTGATGAGAAAACTGGTAGTTTAAAGAACTCACTGAAGGATTTTGAGGTAGAGAAGAAACAGATCTTGCAATGCTTAGAGAAGTTGGAGAAGACACTTTCTTTGTTTTCTAGTAATGGGGTAAAGACGGATTCATCTAAAGGAAATTGTTCTGAAAACGGAGGAGATGGGGCTGGCAAGTCAAATCTGCAGAATTCTGAACAGCACTCTCAAGAAAATATTAAGAAAGAAGAAAATGATTTTTCCAAGCAACATGAAGTGCCTGCATTGTCAGGACATAGTTCACCACACGAGATCCCCCAGCCCTGTCAAGCGAATGATTTAGCATCTCTATCGGTCCTGGCTTCCAATCTGAATAAGAGATTGAAGGCACTTGAGGCAGTCCTAGAATTTCTTGAACAAGCAATTACCTCTCTCAAATATGGTGAGGAGGCACTGAAGTTCATTCAGGAGATCGCTTCTCACCTAGCGGAACTACGGAAGATTGGGATTAGAAAGGATCAGACTTCAGCTTAA

Protein Analysis

925

Amino Acids

101.75

Weight (kDa)

5.15

Isoelectric Point (pI)

42.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zein-binding PF04576 601 - 691 1.1e-28 Zein-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1506
Acc36I ACCTGC 1 cut(s) 995
AccB7I CCANNNNNTGG 1 cut(s) 440
AccI GTMKAC 1 cut(s) 23
AciI CCGC 4 cut(s) 237, 1553, 1937, 2732
AclWI GGATC 6 cut(s) 345, 809, 1088, 1597, 2551, 2769
AcoI YGGCCR 1 cut(s) 1905
AcsI RAATTY 5 cut(s) 501, 1388, 2075, 2455, 2651
AfiI CCNNNNNNNGG 3 cut(s) 440, 575, 1632
AflII CTTAAG 1 cut(s) 950
AgsI TTSAA 9 cut(s) 759, 785, 1222, 1316, 1455, 1581, 1600, 2629, 2660
AjnI CCWGG 3 cut(s) 211, 1540, 2601
AjuI GAANNNNNNNTTGG 2 cut(s) 1548, 1580
Alw21I GWGCWC 5 cut(s) 179, 283, 475, 699, 1766
Alw26I GTCTC 3 cut(s) 77, 356, 2120
Alw44I GTGCAC 1 cut(s) 279
AlwI GGATC 6 cut(s) 345, 809, 1088, 1597, 2551, 2769
AlwNI CAGNNNCTG 2 cut(s) 968, 1382
Ama87I CYCGRG 2 cut(s) 10, 74
AoxI GGCC 3 cut(s) 445, 1409, 1905
ApaLI GTGCAC 1 cut(s) 279
ApeKI GCWGC 3 cut(s) 5, 1921, 2181
ApoI RAATTY 5 cut(s) 501, 1388, 2075, 2455, 2651
ArsI GACNNNNNNTTYG 2 cut(s) 2347, 2379
AseI ATTAAT 1 cut(s) 345
Asp700I GAANNNNTTC 3 cut(s) 1876, 1956, 2410
AspA2I CCTAGG 1 cut(s) 1159
AspS9I GGNCC 5 cut(s) 50, 430, 445, 1031, 2599
AsuC2I CCSGG 2 cut(s) 11, 12
AsuHPI GGTGA 6 cut(s) 1508, 1691, 1796, 2538, 2699, 2717
AvaI CYCGRG 2 cut(s) 10, 74
AvaII GGWCC 4 cut(s) 50, 430, 1031, 2599
AvrII CCTAGG 1 cut(s) 1159
BaeGI GKGCMC 1 cut(s) 283
BalI TGGCCA 1 cut(s) 1907
BanII GRGCYC 3 cut(s) 570, 669, 699
BauI CACGAG 3 cut(s) 897, 1350, 2552
BbsI GAAGAC 2 cut(s) 1537, 2360
Bbv12I GWGCWC 5 cut(s) 179, 283, 475, 699, 1766
BbvI GCAGC 2 cut(s) 1908, 2193
BccI CCATC 7 cut(s) 1022, 1108, 1294, 1751, 1969, 2234, 2423
BcgI CGANNNNNNTGC 2 cut(s) 2577, 2611
BciT130I CCWGG 3 cut(s) 213, 1542, 2603
BciVI GTATCC 2 cut(s) 680, 932
BclI TGATCA 4 cut(s) 187, 1360, 1465, 2164
BcnI CCSGG 2 cut(s) 11, 12
BcoDI GTCTC 3 cut(s) 77, 356, 2120
BfmI CTRYAG 3 cut(s) 1173, 1182, 2450
BfrI CTTAAG 1 cut(s) 950
BfuAI ACCTGC 1 cut(s) 995
BfuI GTATCC 2 cut(s) 680, 932
BglII AGATCT 3 cut(s) 1489, 2056, 2325
BisI GCNGC 5 cut(s) 6, 238, 1922, 1938, 2182
BlnI CCTAGG 1 cut(s) 1159
BlsI GCNGC 5 cut(s) 7, 239, 1923, 1939, 2183
BmcAI AGTACT 2 cut(s) 438, 1086
Bme1390I CCNGG 5 cut(s) 11, 12, 213, 1542, 2603
Bme18I GGWCC 4 cut(s) 50, 430, 1031, 2599
BmeT110I CYCGRG 2 cut(s) 10, 74
BmgT120I GGNCC 5 cut(s) 50, 430, 445, 1031, 2599
BmiI GGNNCC 5 cut(s) 51, 432, 446, 668, 1033
BmrFI CCNGG 5 cut(s) 11, 12, 213, 1542, 2603
BmrI ACTGGG 4 cut(s) 157, 428, 672, 1304
BmsI GCATC 8 cut(s) 97, 736, 857, 1187, 1489, 1689, 2200, 2597
BmuI ACTGGG 4 cut(s) 157, 428, 672, 1304
BpiI GAAGAC 2 cut(s) 1537, 2360
BplI GAGNNNNNCTC 6 cut(s) 245, 277, 631, 663, 1265, 1297
BpmI CTGGAG 1 cut(s) 163
BpuEI CTTGAG 6 cut(s) 584, 1038, 1065, 1292, 2457, 2657
BpuMI CCSGG 2 cut(s) 11, 12
Bsa29I ATCGAT 1 cut(s) 1801
BsaJI CCNNGG 7 cut(s) 9, 10, 11, 44, 880, 1035, 1159
BsaWI WCCGGW 1 cut(s) 802
BsaXI ACNNNNNCTCC 4 cut(s) 153, 183, 784, 814
Bsc4I CCNNNNNNNGG 3 cut(s) 440, 575, 1632
Bse1I ACTGG 5 cut(s) 152, 434, 667, 1310, 2281
Bse3DI GCAATG 5 cut(s) 208, 496, 1305, 1908, 2339
BseBI CCWGG 3 cut(s) 213, 1542, 2603
BseCI ATCGAT 1 cut(s) 1801
BseDI CCNNGG 7 cut(s) 9, 10, 11, 44, 880, 1035, 1159
BseGI GGATG 6 cut(s) 112, 751, 1033, 1704, 2215, 2259
BseLI CCNNNNNNNGG 3 cut(s) 440, 575, 1632
BseMI GCAATG 5 cut(s) 208, 496, 1305, 1908, 2339
BseMII CTCAG 6 cut(s) 351, 498, 543, 596, 1980, 2275
BseNI ACTGG 5 cut(s) 152, 434, 667, 1310, 2281
BseRI GAGGAG 3 cut(s) 1943, 2439, 2705
BseSI GKGCMC 1 cut(s) 283
BseXI GCAGC 2 cut(s) 1908, 2193
BseYI CCCAGC 1 cut(s) 2562
BshFI GGCC 3 cut(s) 447, 1411, 1907
BshVI ATCGAT 1 cut(s) 1801
BsiHKAI GWGCWC 5 cut(s) 179, 283, 475, 699, 1766
BsiHKCI CYCGRG 2 cut(s) 10, 74
BsiSI CCGG 3 cut(s) 11, 465, 803
BslFI GGGAC 6 cut(s) 28, 239, 862, 1017, 1141, 1948
BslI CCNNNNNNNGG 3 cut(s) 440, 575, 1632
BsmAI GTCTC 3 cut(s) 77, 356, 2120
BsmFI GGGAC 6 cut(s) 28, 239, 862, 1017, 1141, 1948
BsmI GAATGC 1 cut(s) 1282
BsnI GGCC 3 cut(s) 447, 1411, 1907
BsoBI CYCGRG 2 cut(s) 10, 74
Bsp1286I GDGCHC 7 cut(s) 179, 283, 475, 570, 669, 699, 1766
Bsp1407I TGTACA 2 cut(s) 1848, 2225
Bsp19I CCATGG 1 cut(s) 880
BspACI CCGC 4 cut(s) 237, 1553, 1937, 2732
BspANI GGCC 3 cut(s) 447, 1411, 1907
BspCNI CTCAG 6 cut(s) 352, 499, 544, 597, 1981, 2274
BspDI ATCGAT 1 cut(s) 1801
BspHI TCATGA 2 cut(s) 763, 1018
BspLI GGNNCC 5 cut(s) 51, 432, 446, 668, 1033
BspMAI CTGCAG 2 cut(s) 1186, 2454
BspMI ACCTGC 1 cut(s) 995
BspPI GGATC 6 cut(s) 345, 809, 1088, 1597, 2551, 2769
BspQI GCTCTTC 1 cut(s) 1974
BspTI CTTAAG 1 cut(s) 950
BsrDI GCAATG 5 cut(s) 208, 496, 1305, 1908, 2339
BsrGI TGTACA 2 cut(s) 1848, 2225
BsrI ACTGG 5 cut(s) 152, 434, 667, 1310, 2281
BssECI CCNNGG 7 cut(s) 9, 10, 11, 44, 880, 1035, 1159
BssSI CACGAG 3 cut(s) 897, 1350, 2552
BssT1I CCWWGG 4 cut(s) 44, 880, 1035, 1159
Bst2BI CACGAG 3 cut(s) 897, 1350, 2552
Bst2UI CCWGG 3 cut(s) 213, 1542, 2603
Bst4CI ACNGT 2 cut(s) 1768, 2234
Bst6I CTCTTC 2 cut(s) 1582, 1974
BstAFI CTTAAG 1 cut(s) 950
BstAUI TGTACA 2 cut(s) 1848, 2225
BstC8I GCNNGC 4 cut(s) 1986, 2145, 2437, 2526
BstDSI CCRYGG 1 cut(s) 880
BstF5I GGATG 6 cut(s) 112, 751, 1033, 1704, 2215, 2259
BstMAI GTCTC 3 cut(s) 77, 356, 2120
BstMWI GCNNNNNNNGC 5 cut(s) 174, 465, 1304, 1373, 2639
BstNI CCWGG 3 cut(s) 213, 1542, 2603
BstSCI CCNGG 5 cut(s) 9, 10, 211, 1540, 2601
BstSFI CTRYAG 3 cut(s) 1173, 1182, 2450
BstSLI GKGCMC 1 cut(s) 283
BstV1I GCAGC 2 cut(s) 1908, 2193
BstV2I GAAGAC 2 cut(s) 1537, 2360
BstX2I RGATCY 8 cut(s) 350, 814, 1093, 1489, 1602, 2056, 2325, 2556
BstYI RGATCY 8 cut(s) 350, 814, 1093, 1489, 1602, 2056, 2325, 2556
Bsu15I ATCGAT 1 cut(s) 1801
BsuI GTATCC 2 cut(s) 680, 932
BsuRI GGCC 3 cut(s) 447, 1411, 1907
BsuTUI ATCGAT 1 cut(s) 1801
BtgI CCRYGG 1 cut(s) 880
BtsCI GGATG 6 cut(s) 112, 751, 1033, 1704, 2215, 2259
BtsI GCAGTG 1 cut(s) 2006
BveI ACCTGC 1 cut(s) 995
Cac8I GCNNGC 4 cut(s) 1986, 2145, 2437, 2526
CaiI CAGNNNCTG 2 cut(s) 968, 1382
CciI TCATGA 2 cut(s) 763, 1018
Cfr13I GGNCC 5 cut(s) 50, 430, 445, 1031, 2599
Cfr9I CCCGGG 1 cut(s) 10
ClaI ATCGAT 1 cut(s) 1801
CsiI ACCWGGT 1 cut(s) 211
DraI TTTAAA 1 cut(s) 2286
EaeI YGGCCR 1 cut(s) 1905
Eam1104I CTCTTC 2 cut(s) 1582, 1974
EarI CTCTTC 2 cut(s) 1582, 1974
Ecl136II GAGCTC 1 cut(s) 697
Eco130I CCWWGG 4 cut(s) 44, 880, 1035, 1159
Eco24I GRGCYC 3 cut(s) 570, 669, 699
Eco47I GGWCC 4 cut(s) 50, 430, 1031, 2599
Eco53kI GAGCTC 1 cut(s) 697
Eco88I CYCGRG 2 cut(s) 10, 74
EcoICRI GAGCTC 1 cut(s) 697
EcoO109I RGGNCCY 1 cut(s) 430
EcoRI GAATTC 1 cut(s) 2455
EcoRII CCWGG 3 cut(s) 211, 1540, 2601
EcoT14I CCWWGG 4 cut(s) 44, 880, 1035, 1159
EcoT38I GRGCYC 3 cut(s) 570, 669, 699
ErhI CCWWGG 4 cut(s) 44, 880, 1035, 1159
FalI AAGNNNNNCTT 4 cut(s) 1316, 1348, 1861, 1893
FaqI GGGAC 6 cut(s) 28, 239, 862, 1017, 1141, 1948
FauNDI CATATG 3 cut(s) 121, 1369, 1947
FbaI TGATCA 4 cut(s) 187, 1360, 1465, 2164
FblI GTMKAC 1 cut(s) 23
Fnu4HI GCNGC 5 cut(s) 6, 238, 1922, 1938, 2182
FokI GGATG 6 cut(s) 119, 758, 1040, 1711, 2222, 2266
FriOI GRGCYC 3 cut(s) 570, 669, 699
Fsp4HI GCNGC 5 cut(s) 6, 238, 1922, 1938, 2182
GluI GCNGC 5 cut(s) 6, 238, 1922, 1938, 2182
GsaI CCCAGC 1 cut(s) 2566
GsuI CTGGAG 1 cut(s) 163
HaeIII GGCC 3 cut(s) 447, 1411, 1907
HapII CCGG 3 cut(s) 11, 465, 803
HincII GTYRAC 1 cut(s) 1712
HindII GTYRAC 1 cut(s) 1712
HindIII AAGCTT 2 cut(s) 290, 1330
HpaII CCGG 3 cut(s) 11, 465, 803
HphI GGTGA 6 cut(s) 1508, 1691, 1796, 2538, 2699, 2717
Hpy166II GTNNAC 5 cut(s) 24, 281, 1547, 1712, 2546
Hpy8I GTNNAC 5 cut(s) 24, 281, 1547, 1712, 2546
HpyAV CCTTC 7 cut(s) 604, 831, 1927, 2036, 2038, 2293, 2623
HpyCH4III ACNGT 2 cut(s) 1768, 2234
HpyCH4IV ACGT 2 cut(s) 1432, 1708
HpyF10VI GCNNNNNNNGC 5 cut(s) 174, 465, 1304, 1373, 2639
HpySE526I ACGT 2 cut(s) 1432, 1708
Ksp22I TGATCA 4 cut(s) 187, 1360, 1465, 2164
LguI GCTCTTC 1 cut(s) 1974
LmnI GCTCC 4 cut(s) 182, 403, 672, 1761
Lsp1109I GCAGC 2 cut(s) 1908, 2193
LweI GCATC 8 cut(s) 97, 736, 857, 1187, 1489, 1689, 2200, 2597
MabI ACCWGGT 1 cut(s) 211
MaeII ACGT 2 cut(s) 1432, 1708
MaeIII GTNAC 6 cut(s) 81, 955, 1186, 1339, 1585, 1611
MfeI CAATTG 2 cut(s) 1535, 1616
MflI RGATCY 8 cut(s) 350, 814, 1093, 1489, 1602, 2056, 2325, 2556
MhlI GDGCHC 7 cut(s) 179, 283, 475, 570, 669, 699, 1766
MlsI TGGCCA 1 cut(s) 1907
MluNI TGGCCA 1 cut(s) 1907
MlyI GAGTC 6 cut(s) 884, 1009, 1163, 1568, 1748, 2203
MmeI TCCRAC 5 cut(s) 664, 916, 1691, 1839, 2328
Mox20I TGGCCA 1 cut(s) 1907
MroXI GAANNNNTTC 3 cut(s) 1876, 1956, 2410
MscI TGGCCA 1 cut(s) 1907
Msp20I TGGCCA 1 cut(s) 1907
MspCI CTTAAG 1 cut(s) 950
MspI CCGG 3 cut(s) 11, 465, 803
MspR9I CCNGG 5 cut(s) 11, 12, 213, 1542, 2603
MunI CAATTG 2 cut(s) 1535, 1616
Mva1269I GAATGC 1 cut(s) 1282
MvaI CCWGG 3 cut(s) 213, 1542, 2603
MwoI GCNNNNNNNGC 5 cut(s) 174, 465, 1304, 1373, 2639
NciI CCSGG 2 cut(s) 11, 12
NcoI CCATGG 1 cut(s) 880
NdeI CATATG 3 cut(s) 121, 1369, 1947
NlaIV GGNNCC 5 cut(s) 51, 432, 446, 668, 1033
NmuCI GTSAC 2 cut(s) 955, 1611
PaeR7I CTCGAG 1 cut(s) 74
PagI TCATGA 2 cut(s) 763, 1018
PciSI GCTCTTC 1 cut(s) 1974
PcsI WCGNNNNNNNCGW 1 cut(s) 1807
PctI GAATGC 1 cut(s) 1282
PdmI GAANNNNTTC 3 cut(s) 1876, 1956, 2410
PfeI GAWTC 8 cut(s) 529, 716, 971, 1043, 1379, 2102, 2257, 2393
PflFI GACNNNGTC 1 cut(s) 19
PflMI CCANNNNNTGG 1 cut(s) 440
PkrI GCNGC 5 cut(s) 7, 239, 1923, 1939, 2183
PleI GAGTC 6 cut(s) 883, 1009, 1162, 1568, 1747, 2202
PpsI GAGTC 6 cut(s) 883, 1009, 1162, 1568, 1747, 2202
PpuMI RGGWCCY 1 cut(s) 430
PshBI ATTAAT 1 cut(s) 345
PsiI TTATAA 1 cut(s) 1506
Psp124BI GAGCTC 1 cut(s) 699
Psp5II RGGWCCY 1 cut(s) 430
Psp6I CCWGG 3 cut(s) 211, 1540, 2601
PspFI CCCAGC 1 cut(s) 2562
PspGI CCWGG 3 cut(s) 211, 1540, 2601
PspN4I GGNNCC 5 cut(s) 51, 432, 446, 668, 1033
PspPI GGNCC 5 cut(s) 50, 430, 445, 1031, 2599
PspPPI RGGWCCY 1 cut(s) 430
PstI CTGCAG 2 cut(s) 1186, 2454
PstNI CAGNNNCTG 2 cut(s) 968, 1382
PsuI RGATCY 8 cut(s) 350, 814, 1093, 1489, 1602, 2056, 2325, 2556
PsyI GACNNNGTC 1 cut(s) 19
SacI GAGCTC 1 cut(s) 699
SapI GCTCTTC 1 cut(s) 1974
SatI GCNGC 5 cut(s) 6, 238, 1922, 1938, 2182
Sau96I GGNCC 5 cut(s) 50, 430, 445, 1031, 2599
ScaI AGTACT 2 cut(s) 438, 1086
SchI GAGTC 6 cut(s) 884, 1009, 1163, 1568, 1748, 2203
ScrFI CCNGG 5 cut(s) 11, 12, 213, 1542, 2603
SduI GDGCHC 7 cut(s) 179, 283, 475, 570, 669, 699, 1766
SexAI ACCWGGT 1 cut(s) 211
SfaNI GCATC 8 cut(s) 97, 736, 857, 1187, 1489, 1689, 2200, 2597
SfcI CTRYAG 3 cut(s) 1173, 1182, 2450
Sfr274I CTCGAG 1 cut(s) 74
SinI GGWCC 4 cut(s) 50, 430, 1031, 2599
SlaI CTCGAG 1 cut(s) 74
SmaI CCCGGG 1 cut(s) 12
SmlI CTYRAG 8 cut(s) 74, 563, 950, 1053, 1080, 1271, 2472, 2636
SmoI CTYRAG 8 cut(s) 74, 563, 950, 1053, 1080, 1271, 2472, 2636
SsiI CCGC 4 cut(s) 237, 1553, 1937, 2732
SspI AATATT 2 cut(s) 452, 2482
SstI GAGCTC 1 cut(s) 699
StyD4I CCNGG 5 cut(s) 9, 10, 211, 1540, 2601
StyI CCWWGG 4 cut(s) 44, 880, 1035, 1159
TaaI ACNGT 2 cut(s) 1768, 2234
TaiI ACGT 2 cut(s) 1435, 1711
TaqI TCGA 3 cut(s) 75, 1630, 1801
TaqII GACCGA 1 cut(s) 2587
TatI WGTACW 7 cut(s) 436, 1084, 1166, 1546, 1848, 2050, 2225
TauI GCSGC 2 cut(s) 240, 1940
TfiI GAWTC 8 cut(s) 529, 716, 971, 1043, 1379, 2102, 2257, 2393
TseFI GTSAC 2 cut(s) 955, 1611
TseI GCWGC 3 cut(s) 5, 1921, 2181
Tsp45I GTSAC 2 cut(s) 955, 1611
TspGWI ACGGA 4 cut(s) 2222, 2405, 2436, 2755
TspMI CCCGGG 1 cut(s) 10
Tth111I GACNNNGTC 1 cut(s) 19
Van91I CCANNNNNTGG 1 cut(s) 440
Vha464I CTTAAG 1 cut(s) 950
VneI GTGCAC 1 cut(s) 279
VpaK11BI GGWCC 4 cut(s) 50, 430, 1031, 2599
VspI ATTAAT 1 cut(s) 345
XapI RAATTY 5 cut(s) 501, 1388, 2075, 2455, 2651
XbaI TCTAGA 1 cut(s) 2059
XcmI CCANNNNNNNNNTGG 1 cut(s) 219
XhoI CTCGAG 1 cut(s) 74
XmaI CCCGGG 1 cut(s) 10
XmaJI CCTAGG 1 cut(s) 1159
XmiI GTMKAC 1 cut(s) 23
XmnI GAANNNNTTC 3 cut(s) 1876, 1956, 2410
ZrmI AGTACT 2 cut(s) 438, 1086
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.