AT1G10290
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0012009
Physical Location & Seq
Forward (+)
3370402 .. 3377463
7062 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G10290.1

Sequence Viewer

Length: 2745 bp
ATGGAGGCGATCGATGAGTTGTCTCAGCTCTCAGATTCGATGAAGCAGGCGGCGTCTCTCCTCGCCGACGAAGATCCCGACGAAACCTCTTCTTCCAAGCGCCCTGCCACTTTCCTCAACGTCGTTGCCTTGGGAAATGTGGGAGCTGGAAAGTCTGCAGTTCTAAACAGTCTAATTGGGCATCCAGTGCTGCCGACGGGTGAGAATGGTGCTACACGAGCTCCTATAATAATTGAATTGAGCAGGGAGAGTTCTTTGAGCAGCAAGGCAATTATCTTGCAAATCGACAATAAATCTCAACAAGTTTCTGCAAGTGCTTTGAGACATTCTCTGCAAGATAGACTTAGCAAAGGAGCCTCAGGGAAGAATCGTGATGAAATAAACTTAAAACTTCGTACCAGCACAGCTCCACCATTGAAATTAGTTGATCTGCCTGGACTGGACCAGAGAATTGTGGACGAGTCAATGATTGCTGAATACGCGCAACACAATGATGCCATACTGCTGGTTATAGTGCCTGCTAGCCAGGCATCTGAAATTTCATCATCCCGAGCCCTGAAGATTGCAAAGGAGTATGATCCAGAGAGTACTAGGACAATAGGCATTATTGGAAAAATTGACCAGGCAGCAGAGAACTCGAAAGCCCTTGCAGCTGTTCAGGCTCTTCTTTCAAATCAAGGACCTCCAAAAACAACTGACATTCCATGGGTTGCTGTTATTGGCCAATCCGTTTCAATTGCGTCAGCACAGTCTGGAAGTGGTGAGAACTCCTTAGAAACTGCTTGGCGTGCTGAGAGTGAAAGTCTTAAGTCCATTTTGACTGGGGCTCCACAAAGCAAGCTTGGCAGAATTGCGTTGGTGGATACCCTTGCTAGCCAGATTCGTAGCAGAATGAAGCTCAGGCTTCCAAGTGTCCTGTCTGGGCTCCAGGGTAAGTCTCAAATAGTGCAGGATGAGCTAGCGAGGCTTGGTGAACAACTAGTTAACAGTGCTGAAGGTACAAGGGCTATAGCTTTGGAGCTTTGCCGTGAGTTTGAAGACAAGTTTCTTCTGCACTTGGCTGGTGGTGAAGGAAGTGGTTGGAAAGTTGTTGCAAGTTTTGAAGGAAATTTCCCCAACCGTATCAAGCAGCTTCCATTGGATAGACATTTTGACCTGAACAATGTTAAAAGGGTTGTTTTGGAGGCAGATGGTTATCAACCTTATCTTATATCTCCAGAGAAAGGGTTGAGATCGTTGATAAAGATTGTCCTTGAGTTGGCTAAAGACCCGGCACGCCTTTGTGTTGATGAGGTTCACCGAGTTCTTGTTGACATAGTTTCAGCTTCTGCAAATGCTACACCTGGACTTGGGAGATATCCTCCTTTCAAGCGAGAGGTTGTAGCTATAGCAAGTGCAGCACTTGATGGTTTCAAGAATGAAGCCAAGAAAATGGTGGTTGCACTAGTTGATATGGAACGCGCTTTTGTACCACCTCAACATTTTATCCGTCTTGTGCAAAGGAGAATGGAAAGACAACGTCGCGAGGAAGAGCTGAAAGGGCGATCTTCTAAGAAGGGACAAGATGCAGAGCAGTCCCTTTTAAGCAGGGCTACTAGTCCTCAGCCAGATGGGCCAACAGCTGGTGGTAGCTTAAAATCAATGAAAGACAAACCTAGTCCGCAAGATAAAGAGACGCCGGAGGTCTCTGGTCTGAAAACTGCTGGACCTGAGGGGGAGATAACAGCAGGGTACTTAATGAAGAAAAGTGCAAAAACAAATGGGTGGAGTAGGCGATGGTTTGTTCTGAATGAGAAAACTGGAAAGCTTGGCTATACCAAAAAGCAAGAAGAAAGAAACTTTCGGGGCACGATAACTTTGGAGGAATGCACTATTGAAGAAATCCCCGAGGACGAAGTAGAAAAGTCAAAGAGCTCGAAGGACAAGAAGGCAAATGGACCTGATTCAAAAGGACCAGGCCTTGTGTTTAAAATAACCTGCAAGGTTCCCTATAAGACTGTACTCAAAGCTCACAATGCCCTTGTGCTTAAGGCTGAGAGTGTAGTCGACAAGAACGAGTGGATTAATAAGTTGCAAAAGGTTATCCAGGCTCGTGGAGGCCAAGTGGGCAGTGTTTCCATGAGGCAGAGTCTTTCAGAAGGTTCACTTGATAAGATGGTTAGGAAACCCATCGATCCAGAAGAGGAGCTCCGGTGGATGTCCCAAGAAGTACGGGGTTACGTTGAAGCTGTTCTTAACAGCCTTGCAGCCAATGTTCCAAAGGCTGTTGTTCTTTGTCAAGTAGAGAAAGCAAAGGAAGACATGCTGAATCAACTCTACAGTTCTATAAGTGCAATAGGCAATGAAAGGATTGAGTCATTGATACAAGAGGATCAGAATGTCAAAAGACGAAGAGAGCGTTACCAGAAACAATCCTCTCTTCTTTCTAAACTCACGAGGCAGCTTAGCATTCACGACAACCGAGCAGCAGCTGCTTCAAGTTATTCGGACAACAGTGGCACTGAGAGTAGCCCAAGAGCAAGTGGAGGTTCTTCAGGGGACGACTGGATGAATGCCTTCAACTCCGCTGCTAATGGACCCTCAGACTCATTGTCAAAGTACGGTTCCGGTGGTCACAGCCGCCGTTACAGTGACCCTGCGCAGAACGGAGATGCAGCATCACCAGGGTCTGGTAGCAACCGCCGCACCACCCCCAATCGGTTGCCACCAGCACCACCGCCTACAGGTTCAGCTTATAGGTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000266 GO:0000902 GO:0000904 GO:0001101 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006892 GO:0006896 GO:0006897 GO:0006898 GO:0006996 GO:0007005 GO:0007034 GO:0007275 GO:0008017 GO:0008092 GO:0008150 GO:0009504 GO:0009506 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009888 GO:0009987 GO:0010015 GO:0010033 GO:0010053 GO:0010054 GO:0012505 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0021700 GO:0022622 GO:0030054 GO:0030135 GO:0030136 GO:0030139 GO:0030154 GO:0030276 GO:0031090 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032878 GO:0032989 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045334 GO:0046907 GO:0048193 GO:0048285 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055044 GO:0065007 GO:0071695 GO:0071840 GO:0071944 GO:0072583 GO:0090558 GO:0090627 GO:0097305 GO:0097708 GO:0098588 GO:0098657 GO:0098805 GO:0099402 GO:1901700 GO:1905392 GO:2000114
KEGG Pathways
Metabolic & Signaling
ko04072 ko04144 ko04721 ko04961 ko05100 map04072 map04144 map04721 map04961 map05100
Pfam Domains
Protein Families
Dynamin_M Dynamin_N GED PH

Protein Analysis

914

Amino Acids

99.17

Weight (kDa)

9.09

Isoelectric Point (pI)

47.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 41 - 205 1.3e-35 Dynamin family
MMR_HSR1 PF01926 41 - 177 5.3e-06 50S ribosome-binding GTPase
Dynamin_M PF01031 256 - 494 2.4e-21 Dynamin central region
PH PF00169 576 - 695 4e-14 PH domain
PH_8 PF15409 578 - 626 2.7e-06 Pleckstrin homology domain
GED PF02212 728 - 810 2e-12 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012009)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10290 AT1G59610
fragaria_vesca FvH4_2g00460 FvH4_2g00460
malus_domestica MD05G1001600.v1.1 MD10G1002800.v1.1
prunus_persica Prupe.8G004400_v2.0.a1
pyrus_communis pycom05g00170 pycom10g00220
rosa_chinensis RchiOBHm_Chr6g0250411
rosa_laevigata RLG00000015541
rosa_multiflora Rmu_sc0001209.1_g000036
rosa_roxburghii Rroxscaffold_7G00217250
rosa_rugosa Rorug05G0496400 Rorug05G0496400
rosa_samantha Rh6AG005800 Rh6DG003800
rosa_wichuraiana Rw6G000640 Rw6G000710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2640
Acc36I ACCTGC 1 cut(s) 1985
AccB7I CCANNNNNTGG 2 cut(s) 1622, 2669
AccI GTMKAC 1 cut(s) 2046
AccII CGCG 3 cut(s) 482, 1461, 1524
AciI CCGC 7 cut(s) 50, 1661, 2565, 2620, 2680, 2683, 2717
AclWI GGATC 4 cut(s) 68, 572, 2168, 2379
AcoI YGGCCR 1 cut(s) 721
AcsI RAATTY 2 cut(s) 537, 1108
AcuI CTGAAG 3 cut(s) 578, 1014, 2517
AcyI GRCGYC 2 cut(s) 53, 1676
AfaI GTAC 8 cut(s) 397, 589, 1000, 1470, 1733, 2001, 2211, 2600
AfiI CCNNNNNNNGG 7 cut(s) 1223, 1258, 1349, 1622, 2669, 2697, 2723
AflII CTTAAG 2 cut(s) 806, 2027
AhdI GACNNNNNGTC 1 cut(s) 2590
AhlI ACTAGT 3 cut(s) 979, 1444, 1595
AjnI CCWGG 8 cut(s) 433, 525, 621, 927, 1342, 1954, 2085, 2662
Alw21I GWGCWC 3 cut(s) 223, 1916, 2190
Alw26I GTCTC 6 cut(s) 27, 60, 316, 942, 1667, 1690
AlwI GGATC 4 cut(s) 68, 572, 2168, 2379
AlwNI CAGNNNCTG 3 cut(s) 1328, 2471, 2669
Ama87I CYCGRG 2 cut(s) 549, 1886
AoxI GGCC 4 cut(s) 721, 1613, 1957, 2098
ApoI RAATTY 2 cut(s) 537, 1108
AseI ATTAAT 1 cut(s) 2064
Asp700I GAANNNNTTC 2 cut(s) 2229, 2555
AspLEI GCGC 4 cut(s) 102, 484, 1463, 2641
AspS9I GGNCC 7 cut(s) 442, 680, 1613, 1706, 1937, 1952, 2576
AsuC2I CCSGG 1 cut(s) 1271
AsuHPI GGTGA 6 cut(s) 212, 773, 983, 1079, 1289, 2652
AsuNHI GCTAGC 3 cut(s) 521, 872, 958
AvaI CYCGRG 2 cut(s) 549, 1886
AvaII GGWCC 6 cut(s) 442, 680, 1706, 1937, 1952, 2576
AxyI CCTNAGG 2 cut(s) 358, 1710
BaeGI GKGCMC 1 cut(s) 1850
BalI TGGCCA 1 cut(s) 723
BanII GRGCYC 6 cut(s) 223, 556, 829, 927, 1916, 2190
BauI CACGAG 3 cut(s) 216, 2091, 2434
BbsI GAAGAC 2 cut(s) 1044, 2304
Bbv12I GWGCWC 3 cut(s) 223, 1916, 2190
BbvCI CCTCAGC 1 cut(s) 1602
BccI CCATC 6 cut(s) 1184, 1400, 1604, 1770, 2149, 2177
BceAI ACGGC 2 cut(s) 1011, 2607
BcgI CGANNNNNNTGC 2 cut(s) 618, 652
BciT130I CCWGG 8 cut(s) 435, 527, 623, 929, 1344, 1956, 2087, 2664
BciVI GTATCC 1 cut(s) 856
BcnI CCSGG 1 cut(s) 1271
BcoDI GTCTC 6 cut(s) 27, 60, 316, 942, 1667, 1690
BcuI ACTAGT 3 cut(s) 979, 1444, 1595
BfaI CTAG 8 cut(s) 522, 591, 873, 959, 980, 1445, 1596, 1656
BfmI CTRYAG 5 cut(s) 156, 1008, 1386, 2317, 2721
BfoI RGCGCY 1 cut(s) 103
BfrI CTTAAG 2 cut(s) 806, 2027
BfuAI ACCTGC 1 cut(s) 1985
BfuI GTATCC 1 cut(s) 856
BglI GCCNNNNNGGC 2 cut(s) 1612, 2106
BlpI GCTNAGC 1 cut(s) 2444
BmcAI AGTACT 1 cut(s) 589
Bme1390I CCNGG 9 cut(s) 435, 527, 623, 929, 1271, 1344, 1956, 2087, 2664
Bme18I GGWCC 6 cut(s) 442, 680, 1706, 1937, 1952, 2576
BmeRI GACNNNNNGTC 1 cut(s) 2590
BmeT110I CYCGRG 2 cut(s) 549, 1886
BmgT120I GGNCC 7 cut(s) 442, 680, 1613, 1706, 1937, 1952, 2576
BmiI GGNNCC 6 cut(s) 355, 828, 926, 1986, 2578, 2605
BmrFI CCNGG 9 cut(s) 435, 527, 623, 929, 1271, 1344, 1956, 2087, 2664
BmrI ACTGGG 1 cut(s) 831
BmsI GCATC 6 cut(s) 190, 484, 539, 1555, 2641, 2666
BmtI GCTAGC 3 cut(s) 525, 876, 962
BmuI ACTGGG 1 cut(s) 831
BpiI GAAGAC 2 cut(s) 1044, 2304
BplI GAGNNNNNCTC 4 cut(s) 313, 345, 1345, 1377
BpmI CTGGAG 2 cut(s) 911, 1200
Bpu10I CCTNAGC 2 cut(s) 899, 1602
Bpu1102I GCTNAGC 1 cut(s) 2444
BpuEI CTTGAG 1 cut(s) 1274
BpuMI CCSGG 1 cut(s) 1271
Bsa29I ATCGAT 2 cut(s) 12, 2172
BsaBI GATNNNNATC 1 cut(s) 1194
BsaHI GRCGYC 2 cut(s) 53, 1676
BsaI GGTCTC 1 cut(s) 1690
BsaJI CCNNGG 5 cut(s) 129, 704, 928, 1887, 2663
BsaWI WCCGGW 2 cut(s) 2190, 2606
BsaXI ACNNNNNCTCC 8 cut(s) 205, 235, 811, 841, 2088, 2118, 2177, 2207
Bsc4I CCNNNNNNNGG 7 cut(s) 1223, 1258, 1349, 1622, 2669, 2697, 2723
Bse1I ACTGG 5 cut(s) 185, 444, 826, 1804, 2549
Bse21I CCTNAGG 2 cut(s) 358, 1710
Bse3DI GCAATG 1 cut(s) 2347
Bse8I GATNNNNATC 1 cut(s) 1194
BseBI CCWGG 8 cut(s) 435, 527, 623, 929, 1344, 1956, 2087, 2664
BseCI ATCGAT 2 cut(s) 12, 2172
BseDI CCNNGG 5 cut(s) 129, 704, 928, 1887, 2663
BseGI GGATG 5 cut(s) 181, 545, 958, 2202, 2553
BseJI GATNNNNATC 1 cut(s) 1194
BseLI CCNNNNNNNGG 7 cut(s) 1223, 1258, 1349, 1622, 2669, 2697, 2723
BseMI GCAATG 1 cut(s) 2347
BseNI ACTGG 5 cut(s) 185, 444, 826, 1804, 2549
BseRI GAGGAG 2 cut(s) 50, 2198
BseSI GKGCMC 1 cut(s) 1850
BsgI GTGCAG 3 cut(s) 968, 1037, 1416
Bsh1236I CGCG 3 cut(s) 482, 1461, 1524
Bsh1285I CGRYCG 1 cut(s) 12
BshFI GGCC 4 cut(s) 723, 1615, 1959, 2100
BshVI ATCGAT 2 cut(s) 12, 2172
BsiEI CGRYCG 1 cut(s) 12
BsiHKAI GWGCWC 3 cut(s) 223, 1916, 2190
BsiHKCI CYCGRG 2 cut(s) 549, 1886
BsiSI CCGG 4 cut(s) 1271, 1679, 2191, 2607
BslFI GGGAC 4 cut(s) 1561, 1572, 2185, 2552
BslI CCNNNNNNNGG 7 cut(s) 1223, 1258, 1349, 1622, 2669, 2697, 2723
BsmAI GTCTC 6 cut(s) 27, 60, 316, 942, 1667, 1690
BsmBI CGTCTC 2 cut(s) 60, 1667
BsmFI GGGAC 4 cut(s) 1561, 1572, 2185, 2552
BsmI GAATGC 3 cut(s) 1871, 2448, 2557
BsnI GGCC 4 cut(s) 723, 1615, 1959, 2100
Bso31I GGTCTC 1 cut(s) 1690
BsoBI CYCGRG 2 cut(s) 549, 1886
Bsp1286I GDGCHC 7 cut(s) 223, 556, 829, 927, 1850, 1916, 2190
Bsp143I GATC 8 cut(s) 9, 73, 427, 577, 1232, 1544, 2173, 2371
Bsp1720I GCTNAGC 1 cut(s) 2444
Bsp19I CCATGG 1 cut(s) 704
Bsp68I TCGCGA 1 cut(s) 1524
BspACI CCGC 7 cut(s) 50, 1661, 2565, 2620, 2680, 2683, 2717
BspANI GGCC 4 cut(s) 723, 1615, 1959, 2100
BspDI ATCGAT 2 cut(s) 12, 2172
BspFNI CGCG 3 cut(s) 482, 1461, 1524
BspLI GGNNCC 6 cut(s) 355, 828, 926, 1986, 2578, 2605
BspMAI CTGCAG 1 cut(s) 160
BspMI ACCTGC 1 cut(s) 1985
BspOI GCTAGC 3 cut(s) 525, 876, 962
BspPI GGATC 4 cut(s) 68, 572, 2168, 2379
BspQI GCTCTTC 2 cut(s) 669, 1524
BspTI CTTAAG 2 cut(s) 806, 2027
BspTNI GGTCTC 1 cut(s) 1690
BsrDI GCAATG 1 cut(s) 2347
BsrI ACTGG 5 cut(s) 185, 444, 826, 1804, 2549
BssECI CCNNGG 5 cut(s) 129, 704, 928, 1887, 2663
BssMI GATC 8 cut(s) 9, 73, 427, 577, 1232, 1544, 2173, 2371
BssNI GRCGYC 2 cut(s) 53, 1676
BssSI CACGAG 3 cut(s) 216, 2091, 2434
BssT1I CCWWGG 2 cut(s) 129, 704
Bst2BI CACGAG 3 cut(s) 216, 2091, 2434
Bst2UI CCWGG 8 cut(s) 435, 527, 623, 929, 1344, 1956, 2087, 2664
Bst4CI ACNGT 9 cut(s) 170, 750, 989, 1121, 1999, 2321, 2495, 2603, 2630
Bst6I CTCTTC 6 cut(s) 94, 669, 1524, 2175, 2386, 2424
BstACI GRCGYC 2 cut(s) 53, 1676
BstAFI CTTAAG 2 cut(s) 806, 2027
BstAPI GCANNNNNTGC 2 cut(s) 187, 2471
BstC8I GCNNGC 8 cut(s) 48, 519, 523, 789, 839, 874, 960, 1276
BstDSI CCRYGG 1 cut(s) 704
BstF5I GGATG 5 cut(s) 181, 545, 958, 2202, 2553
BstFNI CGCG 3 cut(s) 482, 1461, 1524
BstH2I RGCGCY 1 cut(s) 103
BstHHI GCGC 4 cut(s) 102, 484, 1463, 2641
BstKTI GATC 8 cut(s) 12, 76, 430, 580, 1235, 1547, 2176, 2374
BstMAI GTCTC 6 cut(s) 27, 60, 316, 942, 1667, 1690
BstMBI GATC 8 cut(s) 9, 73, 427, 577, 1232, 1544, 2173, 2371
BstMCI CGRYCG 1 cut(s) 12
BstNI CCWGG 8 cut(s) 435, 527, 623, 929, 1344, 1956, 2087, 2664
BstNSI RCATGY 1 cut(s) 2305
BstSCI CCNGG 9 cut(s) 433, 525, 621, 927, 1269, 1342, 1954, 2085, 2662
BstSFI CTRYAG 5 cut(s) 156, 1008, 1386, 2317, 2721
BstSLI GKGCMC 1 cut(s) 1850
BstUI CGCG 3 cut(s) 482, 1461, 1524
BstV2I GAAGAC 2 cut(s) 1044, 2304
BstX2I RGATCY 1 cut(s) 73
BstXI CCANNNNNNTGG 3 cut(s) 505, 1432, 2093
BstYI RGATCY 1 cut(s) 73
Bsu15I ATCGAT 2 cut(s) 12, 2172
Bsu36I CCTNAGG 2 cut(s) 358, 1710
BsuI GTATCC 1 cut(s) 856
BsuRI GGCC 4 cut(s) 723, 1615, 1959, 2100
BsuTUI ATCGAT 2 cut(s) 12, 2172
BtgI CCRYGG 1 cut(s) 704
BtgZI GCGATG 1 cut(s) 1789
BtsCI GGATG 5 cut(s) 181, 545, 958, 2202, 2553
BtsI GCAGTG 1 cut(s) 2116
BtsIMutI CAGTG 6 cut(s) 192, 994, 2116, 2499, 2500, 2635
BtuMI TCGCGA 1 cut(s) 1524
BveI ACCTGC 1 cut(s) 1985
Cac8I GCNNGC 8 cut(s) 48, 519, 523, 789, 839, 874, 960, 1276
CaiI CAGNNNCTG 3 cut(s) 1328, 2471, 2669
CfoI GCGC 4 cut(s) 102, 484, 1463, 2641
Cfr13I GGNCC 7 cut(s) 442, 680, 1613, 1706, 1937, 1952, 2576
ClaI ATCGAT 2 cut(s) 12, 2172
CseI GACGC 3 cut(s) 42, 729, 1684
Csp6I GTAC 8 cut(s) 396, 588, 999, 1469, 1732, 2000, 2210, 2599
CviAII CATG 3 cut(s) 705, 2119, 2302
CviQI GTAC 8 cut(s) 396, 588, 999, 1469, 1732, 2000, 2210, 2599
DpnI GATC 8 cut(s) 11, 75, 429, 579, 1234, 1546, 2175, 2373
DpnII GATC 8 cut(s) 9, 73, 427, 577, 1232, 1544, 2173, 2371
DraI TTTAAA 1 cut(s) 1969
DriI GACNNNNNGTC 1 cut(s) 2590
EaeI YGGCCR 1 cut(s) 721
Eam1104I CTCTTC 6 cut(s) 94, 669, 1524, 2175, 2386, 2424
Eam1105I GACNNNNNGTC 1 cut(s) 2590
EarI CTCTTC 6 cut(s) 94, 669, 1524, 2175, 2386, 2424
Ecl136II GAGCTC 3 cut(s) 221, 1914, 2188
Eco130I CCWWGG 2 cut(s) 129, 704
Eco147I AGGCCT 1 cut(s) 1959
Eco24I GRGCYC 6 cut(s) 223, 556, 829, 927, 1916, 2190
Eco31I GGTCTC 1 cut(s) 1690
Eco32I GATATC 1 cut(s) 1358
Eco47I GGWCC 6 cut(s) 442, 680, 1706, 1937, 1952, 2576
Eco53kI GAGCTC 3 cut(s) 221, 1914, 2188
Eco57I CTGAAG 3 cut(s) 578, 1014, 2517
Eco81I CCTNAGG 2 cut(s) 358, 1710
Eco88I CYCGRG 2 cut(s) 549, 1886
EcoICRI GAGCTC 3 cut(s) 221, 1914, 2188
EcoO109I RGGNCCY 1 cut(s) 680
EcoRII CCWGG 8 cut(s) 433, 525, 621, 927, 1342, 1954, 2085, 2662
EcoRV GATATC 1 cut(s) 1358
EcoT14I CCWWGG 2 cut(s) 129, 704
EcoT38I GRGCYC 6 cut(s) 223, 556, 829, 927, 1916, 2190
ErhI CCWWGG 2 cut(s) 129, 704
Esp3I CGTCTC 2 cut(s) 60, 1667
FaeI CATG 3 cut(s) 708, 2122, 2305
FalI AAGNNNNNCTT 6 cut(s) 327, 359, 2130, 2162, 2217, 2249
FaqI GGGAC 4 cut(s) 1561, 1572, 2185, 2552
FatI CATG 3 cut(s) 704, 2118, 2301
FblI GTMKAC 1 cut(s) 2046
FokI GGATG 5 cut(s) 168, 532, 965, 2209, 2560
FriOI GRGCYC 6 cut(s) 223, 556, 829, 927, 1916, 2190
FspBI CTAG 8 cut(s) 522, 591, 873, 959, 980, 1445, 1596, 1656
FspI TGCGCA 1 cut(s) 2640
GlaI GCGC 4 cut(s) 101, 483, 1462, 2640
GsuI CTGGAG 2 cut(s) 911, 1200
HaeII RGCGCY 1 cut(s) 103
HaeIII GGCC 4 cut(s) 723, 1615, 1959, 2100
HapII CCGG 4 cut(s) 1271, 1679, 2191, 2607
HgaI GACGC 3 cut(s) 42, 729, 1684
HhaI GCGC 4 cut(s) 102, 484, 1463, 2641
Hin1I GRCGYC 2 cut(s) 53, 1676
Hin1II CATG 3 cut(s) 708, 2122, 2305
Hin6I GCGC 4 cut(s) 100, 482, 1461, 2639
HinP1I GCGC 4 cut(s) 100, 482, 1461, 2639
HincII GTYRAC 3 cut(s) 985, 1312, 2047
HindII GTYRAC 3 cut(s) 985, 1312, 2047
HindIII AAGCTT 2 cut(s) 839, 1805
HinfI GANTC 9 cut(s) 35, 367, 461, 880, 1943, 2128, 2308, 2354, 2585
HpaI GTTAAC 1 cut(s) 985
HpaII CCGG 4 cut(s) 1271, 1679, 2191, 2607
HphI GGTGA 6 cut(s) 212, 773, 983, 1079, 1289, 2652
Hpy166II GTNNAC 7 cut(s) 457, 974, 985, 1297, 1312, 2047, 2144
Hpy188I TCNGA 8 cut(s) 34, 535, 1695, 1788, 2137, 2376, 2488, 2584
Hpy8I GTNNAC 7 cut(s) 457, 974, 985, 1297, 1312, 2047, 2144
Hpy99I CGWCG 5 cut(s) 71, 83, 125, 199, 1524
HpyAV CCTTC 8 cut(s) 989, 1064, 1097, 1549, 1912, 1921, 2132, 2566
HpyCH4III ACNGT 9 cut(s) 170, 750, 989, 1121, 1999, 2321, 2495, 2603, 2630
HpyCH4IV ACGT 3 cut(s) 120, 1519, 2220
HpySE526I ACGT 3 cut(s) 120, 1519, 2220
Hsp92I GRCGYC 2 cut(s) 53, 1676
Hsp92II CATG 3 cut(s) 708, 2122, 2305
HspAI GCGC 4 cut(s) 100, 482, 1461, 2639
KspAI GTTAAC 1 cut(s) 985
Kzo9I GATC 8 cut(s) 9, 73, 427, 577, 1232, 1544, 2173, 2371
LguI GCTCTTC 2 cut(s) 669, 1524
LmnI GCTCC 9 cut(s) 143, 226, 353, 412, 832, 930, 1018, 2185, 2193
LweI GCATC 6 cut(s) 190, 484, 539, 1555, 2641, 2666
MaeI CTAG 8 cut(s) 522, 591, 873, 959, 980, 1445, 1596, 1656
MaeII ACGT 3 cut(s) 120, 1519, 2220
MaeIII GTNAC 5 cut(s) 2216, 2399, 2612, 2624, 2630
MalI GATC 8 cut(s) 11, 75, 429, 579, 1234, 1546, 2175, 2373
MboI GATC 8 cut(s) 9, 73, 427, 577, 1232, 1544, 2173, 2371
MfeI CAATTG 1 cut(s) 735
MflI RGATCY 1 cut(s) 73
MhlI GDGCHC 7 cut(s) 223, 556, 829, 927, 1850, 1916, 2190
MlsI TGGCCA 1 cut(s) 723
MluNI TGGCCA 1 cut(s) 723
MlyI GAGTC 4 cut(s) 470, 2137, 2363, 2579
MmeI TCCRAC 1 cut(s) 1061
Mox20I TGGCCA 1 cut(s) 723
MroXI GAANNNNTTC 2 cut(s) 2229, 2555
MscI TGGCCA 1 cut(s) 723
MslI CAYNNNNRTG 1 cut(s) 492
Msp20I TGGCCA 1 cut(s) 723
MspA1I CMGCKG 4 cut(s) 653, 1622, 2471, 2567
MspCI CTTAAG 2 cut(s) 806, 2027
MspI CCGG 4 cut(s) 1271, 1679, 2191, 2607
MspR9I CCNGG 9 cut(s) 435, 527, 623, 929, 1271, 1344, 1956, 2087, 2664
MunI CAATTG 1 cut(s) 735
Mva1269I GAATGC 3 cut(s) 1871, 2448, 2557
MvaI CCWGG 8 cut(s) 435, 527, 623, 929, 1344, 1956, 2087, 2664
MvnI CGCG 3 cut(s) 482, 1461, 1524
NciI CCSGG 1 cut(s) 1271
NcoI CCATGG 1 cut(s) 704
NdeII GATC 8 cut(s) 9, 73, 427, 577, 1232, 1544, 2173, 2371
NheI GCTAGC 3 cut(s) 521, 872, 958
NlaIII CATG 3 cut(s) 708, 2122, 2305
NlaIV GGNNCC 6 cut(s) 355, 828, 926, 1986, 2578, 2605
NmuCI GTSAC 2 cut(s) 2612, 2630
NruI TCGCGA 1 cut(s) 1524
NsbI TGCGCA 1 cut(s) 2640
NspI RCATGY 1 cut(s) 2305
PceI AGGCCT 1 cut(s) 1959
PciSI GCTCTTC 2 cut(s) 669, 1524
PcsI WCGNNNNNNNCGW 3 cut(s) 75, 2052, 2395
PctI GAATGC 3 cut(s) 1871, 2448, 2557
PdmI GAANNNNTTC 2 cut(s) 2229, 2555
PfeI GAWTC 5 cut(s) 35, 367, 880, 1943, 2308
PflFI GACNNNGTC 1 cut(s) 1518
PflMI CCANNNNNTGG 2 cut(s) 1622, 2669
Ple19I CGATCG 1 cut(s) 12
PleI GAGTC 4 cut(s) 469, 2136, 2362, 2579
PpsI GAGTC 4 cut(s) 469, 2136, 2362, 2579
PpuMI RGGWCCY 1 cut(s) 680
PshBI ATTAAT 1 cut(s) 2064
Psp124BI GAGCTC 3 cut(s) 223, 1916, 2190
Psp5II RGGWCCY 1 cut(s) 680
Psp6I CCWGG 8 cut(s) 433, 525, 621, 927, 1342, 1954, 2085, 2662
PspGI CCWGG 8 cut(s) 433, 525, 621, 927, 1342, 1954, 2085, 2662
PspN4I GGNNCC 6 cut(s) 355, 828, 926, 1986, 2578, 2605
PspPI GGNCC 7 cut(s) 442, 680, 1613, 1706, 1937, 1952, 2576
PspPPI RGGWCCY 1 cut(s) 680
PstI CTGCAG 1 cut(s) 160
PstNI CAGNNNCTG 3 cut(s) 1328, 2471, 2669
PsuI RGATCY 1 cut(s) 73
PsyI GACNNNGTC 1 cut(s) 1518
PvuI CGATCG 1 cut(s) 12
PvuII CAGCTG 3 cut(s) 653, 1622, 2471
RruI TCGCGA 1 cut(s) 1524
RsaI GTAC 8 cut(s) 397, 589, 1000, 1470, 1733, 2001, 2211, 2600
RsaNI GTAC 8 cut(s) 396, 588, 999, 1469, 1732, 2000, 2210, 2599
RseI CAYNNNNRTG 1 cut(s) 492
SacI GAGCTC 3 cut(s) 223, 1916, 2190
SalI GTCGAC 1 cut(s) 2045
SapI GCTCTTC 2 cut(s) 669, 1524
Sau3AI GATC 8 cut(s) 9, 73, 427, 577, 1232, 1544, 2173, 2371
Sau96I GGNCC 7 cut(s) 442, 680, 1613, 1706, 1937, 1952, 2576
ScaI AGTACT 1 cut(s) 589
SchI GAGTC 4 cut(s) 470, 2137, 2363, 2579
ScrFI CCNGG 9 cut(s) 435, 527, 623, 929, 1271, 1344, 1956, 2087, 2664
SduI GDGCHC 7 cut(s) 223, 556, 829, 927, 1850, 1916, 2190
SfaNI GCATC 6 cut(s) 190, 484, 539, 1555, 2641, 2666
SfcI CTRYAG 5 cut(s) 156, 1008, 1386, 2317, 2721
SinI GGWCC 6 cut(s) 442, 680, 1706, 1937, 1952, 2576
SmiMI CAYNNNNRTG 1 cut(s) 492
SmlI CTYRAG 3 cut(s) 806, 1253, 2027
SmoI CTYRAG 3 cut(s) 806, 1253, 2027
SpeI ACTAGT 3 cut(s) 979, 1444, 1595
SseBI AGGCCT 1 cut(s) 1959
SsiI CCGC 7 cut(s) 50, 1661, 2565, 2620, 2680, 2683, 2717
SspMI CTAG 8 cut(s) 522, 591, 873, 959, 980, 1445, 1596, 1656
SstI GAGCTC 3 cut(s) 223, 1916, 2190
StuI AGGCCT 1 cut(s) 1959
StyD4I CCNGG 9 cut(s) 433, 525, 621, 927, 1269, 1342, 1954, 2085, 2662
StyI CCWWGG 2 cut(s) 129, 704
TaaI ACNGT 9 cut(s) 170, 750, 989, 1121, 1999, 2321, 2495, 2603, 2630
TaiI ACGT 3 cut(s) 123, 1522, 2223
TaqI TCGA 7 cut(s) 12, 38, 285, 638, 1916, 2046, 2172
TatI WGTACW 2 cut(s) 587, 1999
TauI GCSGC 3 cut(s) 53, 2622, 2685
TfiI GAWTC 5 cut(s) 35, 367, 880, 1943, 2308
TscAI CASTG 6 cut(s) 192, 994, 2116, 2500, 2506, 2635
TseFI GTSAC 2 cut(s) 2612, 2630
Tsp45I GTSAC 2 cut(s) 2612, 2630
TspDTI ATGAA 9 cut(s) 56, 390, 531, 908, 1434, 1658, 1754, 2358, 2564
TspGWI ACGGA 3 cut(s) 718, 1478, 2661
TspRI CASTG 6 cut(s) 192, 994, 2116, 2500, 2506, 2635
Tth111I GACNNNGTC 1 cut(s) 1518
Van91I CCANNNNNTGG 2 cut(s) 1622, 2669
Vha464I CTTAAG 2 cut(s) 806, 2027
VpaK11BI GGWCC 6 cut(s) 442, 680, 1706, 1937, 1952, 2576
VspI ATTAAT 1 cut(s) 2064
XapI RAATTY 2 cut(s) 537, 1108
XceI RCATGY 1 cut(s) 2305
XcmI CCANNNNNNNNNTGG 1 cut(s) 1432
XmiI GTMKAC 1 cut(s) 2046
XmnI GAANNNNTTC 2 cut(s) 2229, 2555
XspI CTAG 8 cut(s) 522, 591, 873, 959, 980, 1445, 1596, 1656
ZrmI AGTACT 1 cut(s) 589
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.