AT1G59610
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0012009
Physical Location & Seq
Forward (+)
21893142 .. 21901086
7945 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G59610.1

Sequence Viewer

Length: 2763 bp
ATGGAGGCGATCGATGAGTTGTCTCAGCTTTCGGATTCGATGAGACAAGCGGCGTCTCTGCTCGCTGACGAAGATCCCGATGAGACCTCTTCTTCTAGACGGCCAGCTACTTCTCTCAACGTCGTTGCCCTAGGGAATGTGGGAGCTGGAAAGTCTGCAGTTCTAAATAGCCTAATTGGGCATCCAGTTCTGCCGACGGGTGAGAATGGTGCGACACGGGCTCCTATTATCATTGATTTGAGTAGAGAAGAATCACTGAGCAGCAAGGCAATAATCTTGCAAATTGACAATAAAAATCAACAAGTTTCTGCAAGTGCACTAAGGCATTCACTACAAGATAGGCTTAGCAAAGGAGCTTCAGGAAGGGGTCGTGATGAAATATACCTAAAACTTCGTACCAGCACAGCTCCACCACTGAAATTGATTGATTTGCCTGGACTGGACCAGCGAATTGTGGACGATTCTATGATTGGTGAACATGCACAGCACAACGATGCTATATTGCTGGTTGTTGTGCCTGCTAGCCAGGCATCTGAAATTTCGTCATCTCGAGCCCTGAAGATCGCAAAGGAGTATGATCCAGAGAGTACTAGGACAGTAGGAATTATCAGCAAAATTGATCAGGCAGCAGAGAACCCAAAGTCCCTTGCAGCAGTTCAGGCGCTTCTTTCAAATCAAGGACCTCCAAAAACAACTGATATTCCATGGGTTGCACTTATTGGCCAATCTGTCTCAATTGCATCAGCGCAGTCTGGAGGCAGTGAGAACTCTTTAGAAACTGCTTGGCGTGCTGAGAGTGAAAGCCTTAAATCCATTTTGACTGGTGCTCCACAAAGCAAACTTGGCAGAATTGCCCTGGTCGACACTCTTGCTAGCCAGATCCGTAGCAGAATGAAGCTCAGGCTTCCGAACATCTTAACTGGACTCCAGGGTAAGTCTCAAATAGTGCAGGACGAATTAGCGAGGCTTGGTGAGCAATTGGTTAGCAGTGCTGAAGGCACAAGGGCAATAGCTTTGGAGCTTTGTCGTGAGTTTGAAGACAAATTTCTTCTCCATTTAGCTGGTGGTGAAGGAAGTGGTTGGAAAGTTGTTGCAAGTTTTGAAGGCAATTTCCCCAATCGTATCAAAAAGCTTCCGTTGGATAGACATTTTGACTTGAACAATGTCAAAAGGATCGTGTTGGAGGCTGATGGTTATCAACCTTATCTCATATCTCCAGAGAAAGGGTTGAGATCGTTAATAAAAACCGTTCTTGAGTTGGCTAAAGACCCAGCACGACTATGTGTTGATGAGGTTCACCGAGTGCTTGTTGACATAGTTTCAGCTTCCGCGAATGCCACACCTGGTCTTGGGAGATATCCTCCTTTTAAGAGAGAGGTTGTAGCTATAGCAAGTGCCGCACTTGATGGATTCAAGAATGAAGCTAAGAAGATGGTAGTTGCATTAGTTGATATGGAGCGTGCATTTGTACCACCTCAGCACTTCATCCGCCTCGTACAAAGAAGAATGGAAAGGCAGCGTCGTGAGGAGGAGCTAAAAGGTCGTTCCTCTAAAAAGGGACAAGATGCAGAGCAGTCTCTCTTAAACAGGGCTACTAGTCCTCAGCCAGATGGGCCATCATCAACTGGTGGTAGCTTAAAATCTTTGAGAGACAAATTAATGCCACAAGATAAAGATAAAGATAAAGAAAAAGAGACTCCGGAGGTGTCTGGTCTGAAGACTGCTGGACCTGAGGGAGAGATAACTGCAGGGTACTTAATGAAGAAAAGTGCAAAGACAAATGGGTGGAGTAGGCGATGGTTTGTTCTGAATGAAAAAACTGGAAAGCTTGGTTATACAAAAAAACAAGAAGAAAGAAACTTCCGCGGCACTGTAACTTTGGAGGAATGCAGTATCGAAGAAATTTCTGATGATGAAGGAGAAAAATCAAAGAGCTCGAAAGATAAGAAATCAAATGGACCGGATTCAAAAGGACCAGGCCTTGTATTTAAGATAACTTGCAGGGTTCCATATAAGACTGTACTTAAAGCTCACAATGCGTTGGTTCTCAAGGCCGAGAGCATGGTTGATAAGAATGAATGGATAAATAAGCTGCAAAAGGTTATCCAGGCCCGAGGAGGCCAAGTGGGTAGCGCTTCCATGAGACAAAGTCTTTCAGAAGGCTCACTTGATAAGATGGTAAGGAAACCGGTCGACCCGGAAGAGGAATTACGGTGGATGTCCCAAGAAGTACGGGGTTATGTTGAAGCTGTTCTCAACAGTCTAGCTGCCAATGTTCCAAAGGCTGTTGTTCTCTGTCAAGTGGAGAAATCCAAGGAAGACATGCTGAATCAGCTATACAGCTCTATCAGCGCAATTGGTAATGAGAGGATTGAATCATTGATTCAAGAGGATCAGAACGTCAAAAGACGAAGAGACCGTTACCAGAAACAGTCCTCTCTTCTCTCAAAGCTCACTAGGCAGCTTAGCATTCACGATAACCGAGCAGCTGCTGCTTCAAGCTGGTCTGACAATAGTGGCACTGAAAGCAGCCCGAGAACCAATGGAGGGTCATCAGGAGAGGACTGGATGAATGCGTTTAACGCAGCTGCTAGTGGACCTGACTCATTGAAGAGATATGGATCTGGCGGCCATAGCCGTCGTTACAGTGATCCAGCACAGAATGGTGAGGATTCTTCTGGATCTGGTGGCAGCTCCCGTCGCACCACACCAAACCGGCTCCCACCAGCTCCGCCACAGTCTGGATCATCTTACAGGTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000266 GO:0000902 GO:0000904 GO:0001101 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006892 GO:0006896 GO:0006897 GO:0006898 GO:0006996 GO:0007005 GO:0007034 GO:0007275 GO:0008017 GO:0008092 GO:0008150 GO:0009504 GO:0009506 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009888 GO:0009987 GO:0010015 GO:0010033 GO:0010053 GO:0010054 GO:0012505 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0021700 GO:0022622 GO:0030054 GO:0030135 GO:0030136 GO:0030139 GO:0030154 GO:0030276 GO:0031090 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032878 GO:0032989 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045334 GO:0046907 GO:0048193 GO:0048285 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055044 GO:0065007 GO:0071695 GO:0071840 GO:0071944 GO:0072583 GO:0090558 GO:0090627 GO:0097305 GO:0097708 GO:0098588 GO:0098657 GO:0098805 GO:0099402 GO:1901700 GO:1905392 GO:2000114
KEGG Pathways
Metabolic & Signaling
ko04072 ko04144 ko04721 ko04961 ko05100 map04072 map04144 map04721 map04961 map05100
Pfam Domains
Protein Families
Dynamin_M Dynamin_N GED PH

Protein Analysis

920

Amino Acids

100.23

Weight (kDa)

9.1

Isoelectric Point (pI)

47.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 41 - 205 6.5e-34 Dynamin family
Dynamin_M PF01031 257 - 494 2.2e-22 Dynamin central region
PH PF00169 583 - 702 9.2e-13 PH domain
PH_8 PF15409 585 - 637 4e-06 Pleckstrin homology domain
GED PF02212 735 - 817 2.7e-12 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012009)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10290 AT1G59610
fragaria_vesca FvH4_2g00460 FvH4_2g00460
malus_domestica MD05G1001600.v1.1 MD10G1002800.v1.1
prunus_persica Prupe.8G004400_v2.0.a1
pyrus_communis pycom05g00170 pycom10g00220
rosa_chinensis RchiOBHm_Chr6g0250411
rosa_laevigata RLG00000015541
rosa_multiflora Rmu_sc0001209.1_g000036
rosa_roxburghii Rroxscaffold_7G00217250
rosa_rugosa Rorug05G0496400 Rorug05G0496400
rosa_samantha Rh6AG005800 Rh6DG003800
rosa_wichuraiana Rw6G000640 Rw6G000710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 2741
AccI GTMKAC 2 cut(s) 861, 2193
AccII CGCG 2 cut(s) 1331, 1866
AccIII TCCGGA 1 cut(s) 1699
AciI CCGC 8 cut(s) 50, 1329, 1398, 1489, 1864, 1866, 2628, 2732
AclWI GGATC 9 cut(s) 68, 572, 874, 1181, 2400, 2629, 2645, 2689, 2752
AcoI YGGCCR 3 cut(s) 101, 721, 2629
AcsI RAATTY 3 cut(s) 537, 1043, 1902
AcuI CTGAAG 4 cut(s) 342, 578, 1014, 1736
AcyI GRCGYC 1 cut(s) 53
AdeI CACNNNGTG 1 cut(s) 1303
AfaI GTAC 7 cut(s) 397, 589, 1470, 1497, 1754, 2022, 2232
AfeI AGCGCT 1 cut(s) 2134
AfiI CCNNNNNNNGG 5 cut(s) 1223, 1349, 2203, 2547, 2741
AgeI ACCGGT 1 cut(s) 2188
AhlI ACTAGT 1 cut(s) 1595
AjnI CCWGG 7 cut(s) 433, 525, 855, 927, 1342, 1975, 2106
AloI GAACNNNNNNTCC 2 cut(s) 626, 658
Alw21I GWGCWC 3 cut(s) 319, 829, 1937
Alw44I GTGCAC 1 cut(s) 315
AlwI GGATC 9 cut(s) 68, 572, 874, 1181, 2400, 2629, 2645, 2689, 2752
AlwNI CAGNNNCTG 1 cut(s) 2492
Ama87I CYCGRG 3 cut(s) 549, 2112, 2533
Aor13HI TCCGGA 1 cut(s) 1699
Aor51HI AGCGCT 1 cut(s) 2134
AoxI GGCC 8 cut(s) 101, 721, 1613, 1978, 2052, 2109, 2119, 2629
ApaLI GTGCAC 1 cut(s) 315
ApoI RAATTY 3 cut(s) 537, 1043, 1902
AseI ATTAAT 1 cut(s) 1658
AsiGI ACCGGT 1 cut(s) 2188
Asp700I GAANNNNTTC 1 cut(s) 2250
AspA2I CCTAGG 1 cut(s) 130
AspLEI GCGC 4 cut(s) 664, 748, 2135, 2354
AspS9I GGNCC 8 cut(s) 442, 680, 1613, 1727, 1958, 1973, 2110, 2597
AsuC2I CCSGG 1 cut(s) 2198
AsuHPI GGTGA 6 cut(s) 212, 485, 983, 1079, 1289, 2678
AsuNHI GCTAGC 2 cut(s) 521, 872
AvaI CYCGRG 3 cut(s) 549, 2112, 2533
AvaII GGWCC 6 cut(s) 442, 680, 1727, 1958, 1973, 2597
AvrII CCTAGG 1 cut(s) 130
AxyI CCTNAGG 1 cut(s) 1731
BaeGI GKGCMC 1 cut(s) 319
BalI TGGCCA 1 cut(s) 723
BanII GRGCYC 3 cut(s) 223, 556, 1937
BarI GAAGNNNNNNTAC 2 cut(s) 2193, 2225
BbsI GAAGAC 3 cut(s) 1044, 1724, 2325
Bbv12I GWGCWC 3 cut(s) 319, 829, 1937
BbvCI CCTCAGC 2 cut(s) 1476, 1602
BccI CCATC 7 cut(s) 1184, 1400, 1426, 1604, 1624, 1791, 2170
BceAI ACGGC 2 cut(s) 116, 2622
BcgI CGANNNNNNTGC 2 cut(s) 851, 885
BciT130I CCWGG 7 cut(s) 435, 527, 857, 929, 1344, 1977, 2108
BclI TGATCA 1 cut(s) 619
BcnI CCSGG 1 cut(s) 2198
BcuI ACTAGT 1 cut(s) 1595
BfaI CTAG 9 cut(s) 96, 131, 522, 591, 873, 1596, 2264, 2457, 2592
BfmI CTRYAG 3 cut(s) 156, 1386, 1746
BfoI RGCGCY 2 cut(s) 665, 2136
BglI GCCNNNNNGGC 1 cut(s) 1612
BlnI CCTAGG 1 cut(s) 130
BlpI GCTNAGC 2 cut(s) 344, 2465
BmcAI AGTACT 1 cut(s) 589
Bme1390I CCNGG 8 cut(s) 435, 527, 857, 929, 1344, 1977, 2108, 2198
Bme18I GGWCC 6 cut(s) 442, 680, 1727, 1958, 1973, 2597
BmeT110I CYCGRG 3 cut(s) 549, 2112, 2533
BmgT120I GGNCC 8 cut(s) 442, 680, 1613, 1727, 1958, 1973, 2110, 2597
BmiI GGNNCC 3 cut(s) 222, 2007, 2720
BmrFI CCNGG 8 cut(s) 435, 527, 857, 929, 1344, 1977, 2108, 2198
BmsI GCATC 5 cut(s) 190, 484, 539, 749, 1555
BmtI GCTAGC 2 cut(s) 525, 876
BpiI GAAGAC 3 cut(s) 1044, 1724, 2325
BplI GAGNNNNNCTC 2 cut(s) 1345, 1377
BpmI CTGGAG 3 cut(s) 774, 911, 1200
Bpu10I CCTNAGC 3 cut(s) 899, 1476, 1602
Bpu1102I GCTNAGC 2 cut(s) 344, 2465
BpuEI CTTGAG 2 cut(s) 1274, 2033
BpuMI CCSGG 1 cut(s) 2198
Bsa29I ATCGAT 1 cut(s) 12
BsaBI GATNNNNATC 2 cut(s) 1194, 2620
BsaHI GRCGYC 1 cut(s) 53
BsaI GGTCTC 2 cut(s) 77, 2409
BsaJI CCNNGG 7 cut(s) 130, 704, 855, 928, 1864, 2113, 2313
BsaWI WCCGGW 3 cut(s) 1699, 1960, 2188
BsaXI ACNNNNNCTCC 6 cut(s) 205, 235, 811, 841, 2109, 2139
Bsc4I CCNNNNNNNGG 5 cut(s) 1223, 1349, 2203, 2547, 2741
Bse118I RCCGGY 2 cut(s) 2188, 2715
Bse1I ACTGG 7 cut(s) 185, 444, 826, 925, 1630, 1825, 2570
Bse21I CCTNAGG 1 cut(s) 1731
Bse8I GATNNNNATC 2 cut(s) 1194, 2620
BseAI TCCGGA 1 cut(s) 1699
BseBI CCWGG 7 cut(s) 435, 527, 857, 929, 1344, 1977, 2108
BseCI ATCGAT 1 cut(s) 12
BseDI CCNNGG 7 cut(s) 130, 704, 855, 928, 1864, 2113, 2313
BseGI GGATG 4 cut(s) 181, 1485, 2223, 2574
BseJI GATNNNNATC 2 cut(s) 1194, 2620
BseLI CCNNNNNNNGG 5 cut(s) 1223, 1349, 2203, 2547, 2741
BseMII CTCAG 7 cut(s) 38, 248, 783, 913, 1490, 1616, 1722
BseNI ACTGG 7 cut(s) 185, 444, 826, 925, 1630, 1825, 2570
BseRI GAGGAG 3 cut(s) 1541, 1544, 2130
BseSI GKGCMC 1 cut(s) 319
BseYI CCCAGC 1 cut(s) 1270
BsgI GTGCAG 1 cut(s) 968
Bsh1236I CGCG 2 cut(s) 1331, 1866
Bsh1285I CGRYCG 2 cut(s) 12, 2193
BshFI GGCC 8 cut(s) 103, 723, 1615, 1980, 2054, 2111, 2121, 2631
BshTI ACCGGT 1 cut(s) 2188
BshVI ATCGAT 1 cut(s) 12
BsiEI CGRYCG 2 cut(s) 12, 2193
BsiHKAI GWGCWC 3 cut(s) 319, 829, 1937
BsiHKCI CYCGRG 3 cut(s) 549, 2112, 2533
BsiSI CCGG 5 cut(s) 1700, 1961, 2189, 2198, 2716
BslFI GGGAC 3 cut(s) 628, 1572, 2206
BslI CCNNNNNNNGG 5 cut(s) 1223, 1349, 2203, 2547, 2741
BsmBI CGTCTC 1 cut(s) 60
BsmFI GGGAC 3 cut(s) 628, 1572, 2206
BsmI GAATGC 5 cut(s) 325, 1339, 1892, 2469, 2578
BsnI GGCC 8 cut(s) 103, 723, 1615, 1980, 2054, 2111, 2121, 2631
Bso31I GGTCTC 2 cut(s) 77, 2409
BsoBI CYCGRG 3 cut(s) 549, 2112, 2533
Bsp1286I GDGCHC 5 cut(s) 223, 319, 556, 829, 1937
Bsp13I TCCGGA 1 cut(s) 1699
Bsp1720I GCTNAGC 2 cut(s) 344, 2465
Bsp19I CCATGG 1 cut(s) 704
BspACI CCGC 8 cut(s) 50, 1329, 1398, 1489, 1864, 1866, 2628, 2732
BspANI GGCC 8 cut(s) 103, 723, 1615, 1980, 2054, 2111, 2121, 2631
BspCNI CTCAG 7 cut(s) 37, 249, 784, 912, 1489, 1615, 1723
BspDI ATCGAT 1 cut(s) 12
BspEI TCCGGA 1 cut(s) 1699
BspFNI CGCG 2 cut(s) 1331, 1866
BspLI GGNNCC 3 cut(s) 222, 2007, 2720
BspMAI CTGCAG 2 cut(s) 160, 1750
BspOI GCTAGC 2 cut(s) 525, 876
BspPI GGATC 9 cut(s) 68, 572, 874, 1181, 2400, 2629, 2645, 2689, 2752
BspTNI GGTCTC 2 cut(s) 77, 2409
BsrFI RCCGGY 2 cut(s) 2188, 2715
BsrI ACTGG 7 cut(s) 185, 444, 826, 925, 1630, 1825, 2570
BssAI RCCGGY 2 cut(s) 2188, 2715
BssECI CCNNGG 7 cut(s) 130, 704, 855, 928, 1864, 2113, 2313
BssNI GRCGYC 1 cut(s) 53
BssT1I CCWWGG 3 cut(s) 130, 704, 2313
Bst2UI CCWGG 7 cut(s) 435, 527, 857, 929, 1344, 1977, 2108
Bst6I CTCTTC 5 cut(s) 94, 2196, 2407, 2445, 2606
BstACI GRCGYC 1 cut(s) 53
BstAPI GCANNNNNTGC 1 cut(s) 2492
BstC8I GCNNGC 7 cut(s) 63, 105, 519, 523, 789, 874, 1461
BstDSI CCRYGG 2 cut(s) 704, 1864
BstF5I GGATG 4 cut(s) 181, 1485, 2223, 2574
BstFNI CGCG 2 cut(s) 1331, 1866
BstH2I RGCGCY 2 cut(s) 665, 2136
BstHHI GCGC 4 cut(s) 664, 748, 2135, 2354
BstMCI CGRYCG 2 cut(s) 12, 2193
BstNI CCWGG 7 cut(s) 435, 527, 857, 929, 1344, 1977, 2108
BstNSI RCATGY 2 cut(s) 482, 2326
BstSCI CCNGG 8 cut(s) 433, 525, 855, 927, 1342, 1975, 2106, 2196
BstSFI CTRYAG 3 cut(s) 156, 1386, 1746
BstSLI GKGCMC 1 cut(s) 319
BstUI CGCG 2 cut(s) 1331, 1866
BstV2I GAAGAC 3 cut(s) 1044, 1724, 2325
BstX2I RGATCY 4 cut(s) 73, 879, 2621, 2681
BstXI CCANNNNNNTGG 1 cut(s) 1061
BstYI RGATCY 4 cut(s) 73, 879, 2621, 2681
Bsu15I ATCGAT 1 cut(s) 12
Bsu36I CCTNAGG 1 cut(s) 1731
BsuRI GGCC 8 cut(s) 103, 723, 1615, 1980, 2054, 2111, 2121, 2631
BsuTUI ATCGAT 1 cut(s) 12
BtgI CCRYGG 2 cut(s) 704, 1864
BtgZI GCGATG 1 cut(s) 1810
BtsCI GGATG 4 cut(s) 181, 1485, 2223, 2574
BtsI GCAGTG 2 cut(s) 766, 994
BtsIMutI CAGTG 7 cut(s) 254, 413, 766, 994, 1869, 2520, 2653
Cac8I GCNNGC 7 cut(s) 63, 105, 519, 523, 789, 874, 1461
CaiI CAGNNNCTG 1 cut(s) 2492
CfoI GCGC 4 cut(s) 664, 748, 2135, 2354
Cfr10I RCCGGY 2 cut(s) 2188, 2715
Cfr13I GGNCC 8 cut(s) 442, 680, 1613, 1727, 1958, 1973, 2110, 2597
Cfr42I CCGCGG 1 cut(s) 1867
ClaI ATCGAT 1 cut(s) 12
CseI GACGC 2 cut(s) 42, 1508
CsiI ACCWGGT 1 cut(s) 1342
Csp6I GTAC 7 cut(s) 396, 588, 1469, 1496, 1753, 2021, 2231
CspAI ACCGGT 1 cut(s) 2188
CspCI CAANNNNNGTGG 2 cut(s) 402, 437
CviAII CATG 5 cut(s) 479, 705, 2062, 2140, 2323
CviQI GTAC 7 cut(s) 396, 588, 1469, 1496, 1753, 2021, 2231
DraIII CACNNNGTG 1 cut(s) 1303
EaeI YGGCCR 3 cut(s) 101, 721, 2629
Eam1104I CTCTTC 5 cut(s) 94, 2196, 2407, 2445, 2606
EarI CTCTTC 5 cut(s) 94, 2196, 2407, 2445, 2606
EciI GGCGGA 2 cut(s) 1478, 2721
Ecl136II GAGCTC 1 cut(s) 1935
Eco130I CCWWGG 3 cut(s) 130, 704, 2313
Eco147I AGGCCT 1 cut(s) 1980
Eco24I GRGCYC 3 cut(s) 223, 556, 1937
Eco31I GGTCTC 2 cut(s) 77, 2409
Eco32I GATATC 1 cut(s) 1358
Eco47I GGWCC 6 cut(s) 442, 680, 1727, 1958, 1973, 2597
Eco47III AGCGCT 1 cut(s) 2134
Eco53kI GAGCTC 1 cut(s) 1935
Eco57I CTGAAG 4 cut(s) 342, 578, 1014, 1736
Eco81I CCTNAGG 1 cut(s) 1731
Eco88I CYCGRG 3 cut(s) 549, 2112, 2533
EcoICRI GAGCTC 1 cut(s) 1935
EcoO109I RGGNCCY 1 cut(s) 680
EcoRII CCWGG 7 cut(s) 433, 525, 855, 927, 1342, 1975, 2106
EcoRV GATATC 1 cut(s) 1358
EcoT14I CCWWGG 3 cut(s) 130, 704, 2313
EcoT38I GRGCYC 3 cut(s) 223, 556, 1937
ErhI CCWWGG 3 cut(s) 130, 704, 2313
Esp3I CGTCTC 1 cut(s) 60
FaeI CATG 5 cut(s) 482, 708, 2065, 2143, 2326
FalI AAGNNNNNCTT 4 cut(s) 327, 359, 2151, 2183
FaqI GGGAC 3 cut(s) 628, 1572, 2206
FatI CATG 5 cut(s) 478, 704, 2061, 2139, 2322
FbaI TGATCA 1 cut(s) 619
FblI GTMKAC 2 cut(s) 861, 2193
FokI GGATG 4 cut(s) 168, 1472, 2230, 2581
FriOI GRGCYC 3 cut(s) 223, 556, 1937
FspBI CTAG 9 cut(s) 96, 131, 522, 591, 873, 1596, 2264, 2457, 2592
GlaI GCGC 4 cut(s) 663, 747, 2134, 2353
GsaI CCCAGC 1 cut(s) 1274
GsuI CTGGAG 3 cut(s) 774, 911, 1200
HaeII RGCGCY 2 cut(s) 665, 2136
HaeIII GGCC 8 cut(s) 103, 723, 1615, 1980, 2054, 2111, 2121, 2631
HapII CCGG 5 cut(s) 1700, 1961, 2189, 2198, 2716
HgaI GACGC 2 cut(s) 42, 1508
HhaI GCGC 4 cut(s) 664, 748, 2135, 2354
Hin1I GRCGYC 1 cut(s) 53
Hin1II CATG 5 cut(s) 482, 708, 2065, 2143, 2326
Hin6I GCGC 4 cut(s) 662, 746, 2133, 2352
HinP1I GCGC 4 cut(s) 662, 746, 2133, 2352
HincII GTYRAC 3 cut(s) 862, 1312, 2194
HindII GTYRAC 3 cut(s) 862, 1312, 2194
HindIII AAGCTT 2 cut(s) 1130, 1826
HpaII CCGG 5 cut(s) 1700, 1961, 2189, 2198, 2716
HphI GGTGA 6 cut(s) 212, 485, 983, 1079, 1289, 2678
Hpy166II GTNNAC 8 cut(s) 317, 457, 476, 862, 1297, 1312, 2194, 2597
Hpy188I TCNGA 9 cut(s) 34, 535, 909, 1716, 1809, 1909, 2158, 2397, 2509
Hpy8I GTNNAC 8 cut(s) 317, 457, 476, 862, 1297, 1312, 2194, 2597
Hpy99I CGWCG 5 cut(s) 125, 199, 1524, 2643, 2703
HpyAV CCTTC 6 cut(s) 357, 989, 1064, 1097, 1910, 2153
HpyCH4IV ACGT 2 cut(s) 120, 2400
HpySE526I ACGT 2 cut(s) 120, 2400
Hsp92I GRCGYC 1 cut(s) 53
Hsp92II CATG 5 cut(s) 482, 708, 2065, 2143, 2326
HspAI GCGC 4 cut(s) 662, 746, 2133, 2352
Kpn2I TCCGGA 1 cut(s) 1699
Ksp22I TGATCA 1 cut(s) 619
KspI CCGCGG 1 cut(s) 1867
LweI GCATC 5 cut(s) 190, 484, 539, 749, 1555
MabI ACCWGGT 1 cut(s) 1342
MaeI CTAG 9 cut(s) 96, 131, 522, 591, 873, 1596, 2264, 2457, 2592
MaeII ACGT 2 cut(s) 120, 2400
MaeIII GTNAC 3 cut(s) 1873, 2420, 2642
MfeI CAATTG 3 cut(s) 735, 977, 2355
MflI RGATCY 4 cut(s) 73, 879, 2621, 2681
MhlI GDGCHC 5 cut(s) 223, 319, 556, 829, 1937
MlsI TGGCCA 1 cut(s) 723
MluNI TGGCCA 1 cut(s) 723
MlyI GAGTC 3 cut(s) 918, 1690, 2597
MmeI TCCRAC 3 cut(s) 1061, 1119, 1161
Mox20I TGGCCA 1 cut(s) 723
MroI TCCGGA 1 cut(s) 1699
MroXI GAANNNNTTC 1 cut(s) 2250
MscI TGGCCA 1 cut(s) 723
MslI CAYNNNNRTG 2 cut(s) 492, 1279
Msp20I TGGCCA 1 cut(s) 723
MspA1I CMGCKG 3 cut(s) 1866, 2489, 2588
MspI CCGG 5 cut(s) 1700, 1961, 2189, 2198, 2716
MspR9I CCNGG 8 cut(s) 435, 527, 857, 929, 1344, 1977, 2108, 2198
MunI CAATTG 3 cut(s) 735, 977, 2355
Mva1269I GAATGC 5 cut(s) 325, 1339, 1892, 2469, 2578
MvaI CCWGG 7 cut(s) 435, 527, 857, 929, 1344, 1977, 2108
MvnI CGCG 2 cut(s) 1331, 1866
NciI CCSGG 1 cut(s) 2198
NcoI CCATGG 1 cut(s) 704
NheI GCTAGC 2 cut(s) 521, 872
NlaIII CATG 5 cut(s) 482, 708, 2065, 2143, 2326
NlaIV GGNNCC 3 cut(s) 222, 2007, 2720
NmeAIII GCCGAG 1 cut(s) 2080
NspI RCATGY 2 cut(s) 482, 2326
PaeR7I CTCGAG 1 cut(s) 549
PceI AGGCCT 1 cut(s) 1980
PcsI WCGNNNNNNNCGW 2 cut(s) 75, 2416
PctI GAATGC 5 cut(s) 325, 1339, 1892, 2469, 2578
PdmI GAANNNNTTC 1 cut(s) 2250
PfeI GAWTC 9 cut(s) 35, 251, 461, 1410, 1964, 2329, 2375, 2383, 2672
PflFI GACNNNGTC 1 cut(s) 2148
PflMI CCANNNNNTGG 1 cut(s) 2741
PinAI ACCGGT 1 cut(s) 2188
Ple19I CGATCG 1 cut(s) 12
PleI GAGTC 3 cut(s) 918, 1690, 2597
PpsI GAGTC 3 cut(s) 918, 1690, 2597
PpuMI RGGWCCY 1 cut(s) 680
PshBI ATTAAT 1 cut(s) 1658
Psp124BI GAGCTC 1 cut(s) 1937
Psp5II RGGWCCY 1 cut(s) 680
Psp6I CCWGG 7 cut(s) 433, 525, 855, 927, 1342, 1975, 2106
PspFI CCCAGC 1 cut(s) 1270
PspGI CCWGG 7 cut(s) 433, 525, 855, 927, 1342, 1975, 2106
PspN4I GGNNCC 3 cut(s) 222, 2007, 2720
PspPI GGNCC 8 cut(s) 442, 680, 1613, 1727, 1958, 1973, 2110, 2597
PspPPI RGGWCCY 1 cut(s) 680
PstI CTGCAG 2 cut(s) 160, 1750
PstNI CAGNNNCTG 1 cut(s) 2492
PsuI RGATCY 4 cut(s) 73, 879, 2621, 2681
PsyI GACNNNGTC 1 cut(s) 2148
PvuI CGATCG 1 cut(s) 12
PvuII CAGCTG 2 cut(s) 2489, 2588
RsaI GTAC 7 cut(s) 397, 589, 1470, 1497, 1754, 2022, 2232
RsaNI GTAC 7 cut(s) 396, 588, 1469, 1496, 1753, 2021, 2231
RseI CAYNNNNRTG 2 cut(s) 492, 1279
SacI GAGCTC 1 cut(s) 1937
SacII CCGCGG 1 cut(s) 1867
SalI GTCGAC 2 cut(s) 860, 2192
Sau96I GGNCC 8 cut(s) 442, 680, 1613, 1727, 1958, 1973, 2110, 2597
ScaI AGTACT 1 cut(s) 589
SchI GAGTC 3 cut(s) 918, 1690, 2597
ScrFI CCNGG 8 cut(s) 435, 527, 857, 929, 1344, 1977, 2108, 2198
SduI GDGCHC 5 cut(s) 223, 319, 556, 829, 1937
SexAI ACCWGGT 1 cut(s) 1342
SfaNI GCATC 5 cut(s) 190, 484, 539, 749, 1555
SfcI CTRYAG 3 cut(s) 156, 1386, 1746
Sfr274I CTCGAG 1 cut(s) 549
Sfr303I CCGCGG 1 cut(s) 1867
SgrBI CCGCGG 1 cut(s) 1867
SinI GGWCC 6 cut(s) 442, 680, 1727, 1958, 1973, 2597
SlaI CTCGAG 1 cut(s) 549
SmiMI CAYNNNNRTG 2 cut(s) 492, 1279
SmlI CTYRAG 3 cut(s) 549, 1253, 2048
SmoI CTYRAG 3 cut(s) 549, 1253, 2048
SpeI ACTAGT 1 cut(s) 1595
SseBI AGGCCT 1 cut(s) 1980
SsiI CCGC 8 cut(s) 50, 1329, 1398, 1489, 1864, 1866, 2628, 2732
SspMI CTAG 9 cut(s) 96, 131, 522, 591, 873, 1596, 2264, 2457, 2592
SstI GAGCTC 1 cut(s) 1937
StuI AGGCCT 1 cut(s) 1980
StyD4I CCNGG 8 cut(s) 433, 525, 855, 927, 1342, 1975, 2106, 2196
StyI CCWWGG 3 cut(s) 130, 704, 2313
TaiI ACGT 2 cut(s) 123, 2403
TaqI TCGA 7 cut(s) 12, 38, 550, 861, 1896, 1937, 2193
TatI WGTACW 2 cut(s) 587, 2020
TauI GCSGC 4 cut(s) 53, 1400, 1869, 2631
TfiI GAWTC 9 cut(s) 35, 251, 461, 1410, 1964, 2329, 2375, 2383, 2672
TscAI CASTG 7 cut(s) 261, 420, 766, 994, 1876, 2527, 2653
TspDTI ATGAA 9 cut(s) 390, 908, 1434, 1474, 1775, 1827, 1929, 2091, 2585
TspGWI ACGGA 2 cut(s) 872, 1125
TspRI CASTG 7 cut(s) 261, 420, 766, 994, 1876, 2527, 2653
Tth111I GACNNNGTC 1 cut(s) 2148
Van91I CCANNNNNTGG 1 cut(s) 2741
VneI GTGCAC 1 cut(s) 315
VpaK11BI GGWCC 6 cut(s) 442, 680, 1727, 1958, 1973, 2597
VspI ATTAAT 1 cut(s) 1658
XapI RAATTY 3 cut(s) 537, 1043, 1902
XbaI TCTAGA 1 cut(s) 95
XceI RCATGY 2 cut(s) 482, 2326
XcmI CCANNNNNNNNNTGG 1 cut(s) 1061
XhoI CTCGAG 1 cut(s) 549
XmaJI CCTAGG 1 cut(s) 130
XmiI GTMKAC 2 cut(s) 861, 2193
XmnI GAANNNNTTC 1 cut(s) 2250
XspI CTAG 9 cut(s) 96, 131, 522, 591, 873, 1596, 2264, 2457, 2592
ZrmI AGTACT 1 cut(s) 589
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.