Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011753

Physical Location & Seq

Genomic Coordinates Forward (+)

4980624 .. 4983367

Gene Structure 2744 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G14560.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 996 bp

ATGGGTTCGTCACAAGGCTCCACACTCTCGGCTGATGTGATGAGCCTTGTGGATACATTGCCTGTGCTTGCAAAAACCCTTATCGCTGGAGGAGCTGCTGGGGCAATTGCTAAGACTGCTGTTGCACCTTTGGAAAGGATCAAAATTCTATTGCAGACTAGAACAAACGACTTTAAGACCCTTGGTGTGTCCCAGTCATTAAAGAAGGTGTTACAATTTGATGGTCCTCTCGGATTCTATAAAGGAAATGGGGCGAGTGTTATTCGGATTATTCCATATGCCGCCCTTCATTACATGACGTATGAAGTTTATCGTGACTGGATTTTGGAAAAAAATCTTCCCTTAGGTTCTGGTCCAATTGTTGATCTTGTGGCTGGTTCAGCTGCAGGTGGAACAGCAGTTTTGTGCACATATCCCCTTGATTTAGCTCGTACTAAGCTAGCTTACCAGGTTTCTGACACAAGACAGAGTCTCCGAGGTGGTGCGAATGGATTTTACCGTCAACCTACTTATTCAGGCATAAAAGAGGTGCTTGCAATGGCTTATAAAGAAGGGGGACCACGCGGGCTATATCGTGGCATAGGGCCAACGCTGATCGGGATCCTTCCTTACGCGGGGCTTAAGTTCTACATATATGAGGAATTGAAAAGGCATGTTCCTGAAGAGCATCAAAACTCTGTTCGAATGCATCTACCATGTGGAGCTTTAGCTGGTTTATTTGGCCAGACCATCACTTACCCATTGGACGTTGTTAGGAGACAAATGCAGGTAGAGAATCTGCAACCTATGACGAGTGAAGGCAACAACAAGCGTTACAAGAACACATTTGATGGGCTTAACACGATTGTTCGAACTCAGGGTTGGAAACAGTTGTTTGCTGGTTTAAGCATCAACTACATTAAGATTGTTCCATCGGTTGCGATTGGATTCACAGTCTATGAGTCGATGAAGTCATGGATGCGAATTCCACCGCGCGAGAGATCAAAGCCAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000295 GO:0003674 GO:0005215 GO:0005346 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006839 GO:0006855 GO:0006862 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0015075 GO:0015101 GO:0015215 GO:0015216 GO:0015217 GO:0015228 GO:0015238 GO:0015605 GO:0015695 GO:0015711 GO:0015748 GO:0015865 GO:0015866 GO:0015868 GO:0015880 GO:0015893 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0035349 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051181 GO:0051182 GO:0051184 GO:0051185 GO:0051234 GO:0051503 GO:0055085 GO:0071077 GO:0071106 GO:0071702 GO:0071705 GO:0072530 GO:0080121 GO:0080122 GO:0098655 GO:0098656 GO:1901264 GO:1901505 GO:1901679 GO:1990542 GO:1990559

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

331

Amino Acids

36.25

Weight (kDa)

9.69

Isoelectric Point (pI)

37.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_carr	PF00153	24 - 111	4.5e-22	Mitochondrial carrier protein
Mito_carr	PF00153	119 - 221	2e-20	Mitochondrial carrier protein
Mito_carr	PF00153	227 - 302	2e-14	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011753)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14560 AT1G14560 AT1G14560
fragaria_vesca	FvH4_2g31630
malus_domestica	MD08G1064700.v1.1 MD15G1057000.v1.1
prunus_persica	Prupe.1G409600_v2.0.a1 Prupe.1G409600_v2.0.a1
pyrus_communis	pycom08g05290 pycom15g05340
rosa_chinensis	RchiOBHm_Chr6g0311191
rosa_multiflora	Rmu_sc0014471.1_g000002
rosa_roxburghii	Rroxscaffold_7G00157920
rosa_rugosa	Rorug06G0386100
rosa_samantha	Rh6AG500400 Rh6BG511000 Rh6CG516700 Rh6DG503300
rosa_wichuraiana	Rw6G043580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	546
AarI	CACCTGC	1 cut(s)	377
Acc36I	ACCTGC	2 cut(s)	377, 757
AccII	CGCG	4 cut(s)	564, 614, 973, 975
AciI	CCGC	4 cut(s)	282, 564, 614, 971
AclWI	GGATC	3 cut(s)	146, 595, 608
AcoI	YGGCCR	1 cut(s)	721
AcsI	RAATTY	2 cut(s)	144, 963
AcuI	CTGAAG	1 cut(s)	681
AfaI	GTAC	1 cut(s)	433
AfiI	CCNNNNNNNGG	1 cut(s)	614
AflII	CTTAAG	1 cut(s)	620
AgsI	TTSAA	1 cut(s)	646
AjnI	CCWGG	1 cut(s)	447
AjuI	GAANNNNNNNTTGG	2 cut(s)	844, 876
AluBI	AGCT	7 cut(s)	95, 383, 428, 439, 443, 704, 710
AluI	AGCT	7 cut(s)	95, 383, 428, 439, 443, 704, 710
Alw21I	GWGCWC	1 cut(s)	410
Alw26I	GTCTC	2 cut(s)	476, 751
Alw44I	GTGCAC	1 cut(s)	406
AlwI	GGATC	3 cut(s)	146, 595, 608
AoxI	GGCC	2 cut(s)	584, 721
ApaLI	GTGCAC	1 cut(s)	406
ApeKI	GCWGC	2 cut(s)	95, 383
ApoI	RAATTY	2 cut(s)	144, 963
AspLEI	GCGC	1 cut(s)	975
AspS9I	GGNCC	4 cut(s)	224, 353, 557, 584
AsuII	TTCGAA	2 cut(s)	682, 850
AsuNHI	GCTAGC	1 cut(s)	439
AvaII	GGWCC	3 cut(s)	224, 353, 557
AxyI	CCTNAGG	1 cut(s)	343
BaeGI	GKGCMC	1 cut(s)	410
BalI	TGGCCA	1 cut(s)	723
BamHI	GGATCC	1 cut(s)	600
Bbv12I	GWGCWC	1 cut(s)	410
BbvI	GCAGC	2 cut(s)	82, 370
BccI	CCATC	4 cut(s)	215, 737, 824, 919
BciT130I	CCWGG	1 cut(s)	449
BciVI	GTATCC	1 cut(s)	46
BcoDI	GTCTC	2 cut(s)	476, 751
BfaI	CTAG	2 cut(s)	159, 440
BfmI	CTRYAG	1 cut(s)	384
BfrI	CTTAAG	1 cut(s)	620
BfuAI	ACCTGC	2 cut(s)	377, 757
BfuI	GTATCC	1 cut(s)	46
BisI	GCNGC	3 cut(s)	96, 282, 384
BlsI	GCNGC	3 cut(s)	97, 283, 385
Bme1390I	CCNGG	1 cut(s)	449
Bme18I	GGWCC	3 cut(s)	224, 353, 557
BmgT120I	GGNCC	4 cut(s)	224, 353, 557, 584
BmiI	GGNNCC	3 cut(s)	19, 558, 602
BmrFI	CCNGG	1 cut(s)	449
BmrI	ACTGGG	1 cut(s)	187
BmsI	GCATC	4 cut(s)	676, 697, 897, 948
BmtI	GCTAGC	1 cut(s)	443
BmuI	ACTGGG	1 cut(s)	187
BpmI	CTGGAG	1 cut(s)	108
Bpu14I	TTCGAA	2 cut(s)	682, 850
BsaBI	GATNNNNATC	1 cut(s)	599
BsaJI	CCNNGG	2 cut(s)	181, 475
BsaXI	ACNNNNNCTCC	2 cut(s)	456, 486
Bsc4I	CCNNNNNNNGG	1 cut(s)	614
Bse1I	ACTGG	2 cut(s)	193, 323
Bse21I	CCTNAGG	1 cut(s)	343
Bse3DI	GCAATG	2 cut(s)	56, 543
Bse8I	GATNNNNATC	1 cut(s)	599
BseBI	CCWGG	1 cut(s)	449
BseDI	CCNNGG	2 cut(s)	181, 475
BseGI	GGATG	1 cut(s)	963
BseJI	GATNNNNATC	1 cut(s)	599
BseLI	CCNNNNNNNGG	1 cut(s)	614
BseMI	GCAATG	2 cut(s)	56, 543
BseMII	CTCAG	1 cut(s)	869
BseNI	ACTGG	2 cut(s)	193, 323
BseRI	GAGGAG	1 cut(s)	105
BseSI	GKGCMC	1 cut(s)	410
BseXI	GCAGC	2 cut(s)	82, 370
BseYI	CCCAGC	1 cut(s)	98
Bsh1236I	CGCG	4 cut(s)	564, 614, 973, 975
BshFI	GGCC	2 cut(s)	586, 723
BsiHKAI	GWGCWC	1 cut(s)	410
BslFI	GGGAC	2 cut(s)	175, 570
BslI	CCNNNNNNNGG	1 cut(s)	614
BsmAI	GTCTC	2 cut(s)	476, 751
BsmFI	GGGAC	2 cut(s)	175, 570
BsmI	GAATGC	1 cut(s)	690
BsnI	GGCC	2 cut(s)	586, 723
Bsp119I	TTCGAA	2 cut(s)	682, 850
Bsp1286I	GDGCHC	1 cut(s)	410
Bsp143I	GATC	5 cut(s)	138, 364, 594, 600, 980
BspACI	CCGC	4 cut(s)	282, 564, 614, 971
BspANI	GGCC	2 cut(s)	586, 723
BspCNI	CTCAG	1 cut(s)	868
BspFNI	CGCG	4 cut(s)	564, 614, 973, 975
BspLI	GGNNCC	3 cut(s)	19, 558, 602
BspMAI	CTGCAG	1 cut(s)	388
BspMI	ACCTGC	2 cut(s)	377, 757
BspOI	GCTAGC	1 cut(s)	443
BspPI	GGATC	3 cut(s)	146, 595, 608
BspQI	GCTCTTC	1 cut(s)	657
BspT104I	TTCGAA	2 cut(s)	682, 850
BspTI	CTTAAG	1 cut(s)	620
BsrDI	GCAATG	2 cut(s)	56, 543
BsrI	ACTGG	2 cut(s)	193, 323
BssECI	CCNNGG	2 cut(s)	181, 475
BssMI	GATC	5 cut(s)	138, 364, 594, 600, 980
BssT1I	CCWWGG	1 cut(s)	181
Bst2UI	CCWGG	1 cut(s)	449
Bst4CI	ACNGT	3 cut(s)	500, 870, 934
Bst6I	CTCTTC	1 cut(s)	657
BstAFI	CTTAAG	1 cut(s)	620
BstBI	TTCGAA	2 cut(s)	682, 850
BstC8I	GCNNGC	5 cut(s)	69, 441, 534, 566, 990
BstDEI	CTNAG	4 cut(s)	111, 343, 435, 855
BstF5I	GGATG	1 cut(s)	963
BstFNI	CGCG	4 cut(s)	564, 614, 973, 975
BstHHI	GCGC	1 cut(s)	975
BstKTI	GATC	5 cut(s)	141, 367, 597, 603, 983
BstMAI	GTCTC	2 cut(s)	476, 751
BstMBI	GATC	5 cut(s)	138, 364, 594, 600, 980
BstMWI	GCNNNNNNNGC	4 cut(s)	92, 101, 116, 380
BstNI	CCWGG	1 cut(s)	449
BstNSI	RCATGY	1 cut(s)	656
BstSCI	CCNGG	1 cut(s)	447
BstSFI	CTRYAG	1 cut(s)	384
BstSLI	GKGCMC	1 cut(s)	410
BstUI	CGCG	4 cut(s)	564, 614, 973, 975
BstV1I	GCAGC	2 cut(s)	82, 370
BstX2I	RGATCY	1 cut(s)	600
BstYI	RGATCY	1 cut(s)	600
Bsu36I	CCTNAGG	1 cut(s)	343
BsuI	GTATCC	1 cut(s)	46
BsuRI	GGCC	2 cut(s)	586, 723
BtsCI	GGATG	1 cut(s)	963
BveI	ACCTGC	2 cut(s)	377, 757
Cac8I	GCNNGC	5 cut(s)	69, 441, 534, 566, 990
CfoI	GCGC	1 cut(s)	975
Cfr13I	GGNCC	4 cut(s)	224, 353, 557, 584
CsiI	ACCWGGT	1 cut(s)	447
Csp6I	GTAC	1 cut(s)	432
CviAII	CATG	5 cut(s)	295, 653, 696, 954, 993
CviQI	GTAC	1 cut(s)	432
DdeI	CTNAG	4 cut(s)	111, 343, 435, 855
DpnI	GATC	5 cut(s)	140, 366, 596, 602, 982
DpnII	GATC	5 cut(s)	138, 364, 594, 600, 980
EaeI	YGGCCR	1 cut(s)	721
Eam1104I	CTCTTC	1 cut(s)	657
EarI	CTCTTC	1 cut(s)	657
Eco130I	CCWWGG	1 cut(s)	181
Eco47I	GGWCC	3 cut(s)	224, 353, 557
Eco57I	CTGAAG	1 cut(s)	681
Eco81I	CCTNAGG	1 cut(s)	343
EcoRI	GAATTC	1 cut(s)	963
EcoRII	CCWGG	1 cut(s)	447
EcoT14I	CCWWGG	1 cut(s)	181
EcoT22I	ATGCAT	1 cut(s)	690
ErhI	CCWWGG	1 cut(s)	181
FaeI	CATG	5 cut(s)	298, 656, 699, 957, 996
FalI	AAGNNNNNCTT	2 cut(s)	516, 548
FaqI	GGGAC	2 cut(s)	175, 570
FatI	CATG	5 cut(s)	294, 652, 695, 953, 992
FauI	CCCGC	2 cut(s)	557, 607
FauNDI	CATATG	1 cut(s)	277
Fnu4HI	GCNGC	3 cut(s)	96, 282, 384
FokI	GGATG	1 cut(s)	970
Fsp4HI	GCNGC	3 cut(s)	96, 282, 384
FspBI	CTAG	2 cut(s)	159, 440
GlaI	GCGC	1 cut(s)	974
GluI	GCNGC	3 cut(s)	96, 282, 384
GsaI	CCCAGC	1 cut(s)	102
GsuI	CTGGAG	1 cut(s)	108
HaeIII	GGCC	2 cut(s)	586, 723
HhaI	GCGC	1 cut(s)	975
Hin1II	CATG	5 cut(s)	298, 656, 699, 957, 996
Hin6I	GCGC	1 cut(s)	973
HinP1I	GCGC	1 cut(s)	973
HincII	GTYRAC	1 cut(s)	503
HindII	GTYRAC	1 cut(s)	503
HinfI	GANTC	5 cut(s)	234, 469, 775, 927, 941
Hpy166II	GTNNAC	2 cut(s)	408, 503
Hpy188I	TCNGA	4 cut(s)	233, 267, 457, 476
Hpy188III	TCNNGA	3 cut(s)	314, 598, 659
Hpy8I	GTNNAC	2 cut(s)	408, 503
HpyAV	CCTTC	5 cut(s)	199, 296, 545, 614, 791
HpyCH4III	ACNGT	3 cut(s)	500, 870, 934
HpyCH4IV	ACGT	2 cut(s)	299, 747
HpyCH4V	TGCA	9 cut(s)	71, 125, 154, 386, 408, 536, 688, 766, 781
HpyF10VI	GCNNNNNNNGC	4 cut(s)	92, 101, 116, 380
HpyF3I	CTNAG	4 cut(s)	111, 343, 435, 855
HpySE526I	ACGT	2 cut(s)	299, 747
Hsp92II	CATG	5 cut(s)	298, 656, 699, 957, 996
HspAI	GCGC	1 cut(s)	973
Kzo9I	GATC	5 cut(s)	138, 364, 594, 600, 980
LguI	GCTCTTC	1 cut(s)	657
LmnI	GCTCC	3 cut(s)	23, 92, 701
Lsp1109I	GCAGC	2 cut(s)	82, 370
LweI	GCATC	4 cut(s)	676, 697, 897, 948
MabI	ACCWGGT	1 cut(s)	447
MaeI	CTAG	2 cut(s)	159, 440
MaeII	ACGT	2 cut(s)	299, 747
MaeIII	GTNAC	4 cut(s)	9, 210, 314, 812
MalI	GATC	5 cut(s)	140, 366, 596, 602, 982
MboI	GATC	5 cut(s)	138, 364, 594, 600, 980
MboII	GAAGA	2 cut(s)	329, 674
MfeI	CAATTG	2 cut(s)	105, 357
MflI	RGATCY	1 cut(s)	600
MhlI	GDGCHC	1 cut(s)	410
MlsI	TGGCCA	1 cut(s)	723
MluCI	AATT	6 cut(s)	105, 144, 215, 357, 641, 963
MluNI	TGGCCA	1 cut(s)	723
MlyI	GAGTC	2 cut(s)	478, 950
MmeI	TCCRAC	1 cut(s)	842
MnlI	CCTC	5 cut(s)	83, 237, 470, 520, 631
Mox20I	TGGCCA	1 cut(s)	723
Mph1103I	ATGCAT	1 cut(s)	690
MscI	TGGCCA	1 cut(s)	723
MseI	TTAA	6 cut(s)	174, 200, 621, 837, 884, 900
Msp20I	TGGCCA	1 cut(s)	723
MspA1I	CMGCKG	1 cut(s)	383
MspCI	CTTAAG	1 cut(s)	620
MspR9I	CCNGG	1 cut(s)	449
MunI	CAATTG	2 cut(s)	105, 357
Mva1269I	GAATGC	1 cut(s)	690
MvaI	CCWGG	1 cut(s)	449
MvnI	CGCG	4 cut(s)	564, 614, 973, 975
MwoI	GCNNNNNNNGC	4 cut(s)	92, 101, 116, 380
NdeI	CATATG	1 cut(s)	277
NdeII	GATC	5 cut(s)	138, 364, 594, 600, 980
NheI	GCTAGC	1 cut(s)	439
NlaIII	CATG	5 cut(s)	298, 656, 699, 957, 996
NlaIV	GGNNCC	3 cut(s)	19, 558, 602
NmeAIII	GCCGAG	1 cut(s)	8
NmuCI	GTSAC	2 cut(s)	9, 314
NsiI	ATGCAT	1 cut(s)	690
NspI	RCATGY	1 cut(s)	656
NspV	TTCGAA	2 cut(s)	682, 850
PaqCI	CACCTGC	1 cut(s)	377
PciSI	GCTCTTC	1 cut(s)	657
PctI	GAATGC	1 cut(s)	690
PfeI	GAWTC	3 cut(s)	234, 775, 927
PflFI	GACNNNGTC	1 cut(s)	468
PkrI	GCNGC	3 cut(s)	97, 283, 385
PleI	GAGTC	2 cut(s)	477, 949
PpsI	GAGTC	2 cut(s)	477, 949
PsiI	TTATAA	1 cut(s)	546
Psp6I	CCWGG	1 cut(s)	447
PspFI	CCCAGC	1 cut(s)	98
PspGI	CCWGG	1 cut(s)	447
PspN4I	GGNNCC	3 cut(s)	19, 558, 602
PspPI	GGNCC	4 cut(s)	224, 353, 557, 584
PstI	CTGCAG	1 cut(s)	388
PsuI	RGATCY	1 cut(s)	600
PsyI	GACNNNGTC	1 cut(s)	468
PvuII	CAGCTG	1 cut(s)	383
RsaI	GTAC	1 cut(s)	433
RsaNI	GTAC	1 cut(s)	432
SapI	GCTCTTC	1 cut(s)	657
SaqAI	TTAA	6 cut(s)	174, 200, 621, 837, 884, 900
SatI	GCNGC	3 cut(s)	96, 282, 384
Sau3AI	GATC	5 cut(s)	138, 364, 594, 600, 980
Sau96I	GGNCC	4 cut(s)	224, 353, 557, 584
SchI	GAGTC	2 cut(s)	478, 950
ScrFI	CCNGG	1 cut(s)	449
SduI	GDGCHC	1 cut(s)	410
SexAI	ACCWGGT	1 cut(s)	447
SfaNI	GCATC	4 cut(s)	676, 697, 897, 948
SfcI	CTRYAG	1 cut(s)	384
SfuI	TTCGAA	2 cut(s)	682, 850
SinI	GGWCC	3 cut(s)	224, 353, 557
SmlI	CTYRAG	1 cut(s)	620
SmoI	CTYRAG	1 cut(s)	620
Sse9I	AATT	6 cut(s)	105, 144, 215, 357, 641, 963
SsiI	CCGC	4 cut(s)	282, 564, 614, 971
SspMI	CTAG	2 cut(s)	159, 440
StyD4I	CCNGG	1 cut(s)	447
StyI	CCWWGG	1 cut(s)	181
TaaI	ACNGT	3 cut(s)	500, 870, 934
TaiI	ACGT	2 cut(s)	302, 750
TaqI	TCGA	3 cut(s)	682, 850, 944
TasI	AATT	6 cut(s)	105, 144, 215, 357, 641, 963
TauI	GCSGC	1 cut(s)	284
TfiI	GAWTC	3 cut(s)	234, 775, 927
Tru1I	TTAA	6 cut(s)	174, 200, 621, 837, 884, 900
Tru9I	TTAA	6 cut(s)	174, 200, 621, 837, 884, 900
TseFI	GTSAC	2 cut(s)	9, 314
TseI	GCWGC	2 cut(s)	95, 383
Tsp45I	GTSAC	2 cut(s)	9, 314
TspDTI	ATGAA	3 cut(s)	278, 318, 962
Tth111I	GACNNNGTC	1 cut(s)	468
Vha464I	CTTAAG	1 cut(s)	620
VneI	GTGCAC	1 cut(s)	406
VpaK11BI	GGWCC	3 cut(s)	224, 353, 557
XapI	RAATTY	2 cut(s)	144, 963
XceI	RCATGY	1 cut(s)	656
XspI	CTAG	2 cut(s)	159, 440
Zsp2I	ATGCAT	1 cut(s)	690

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.