No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G22470 AT1G35210 AT1G72240 |
| fragaria_vesca | FvH4_5g36590 |
| prunus_persica | Prupe.1G522800_v2.0.a1 |
| pyrus_communis | pycom08g16170 pycom15g33530 |
| rosa_chinensis | RchiOBHm_Chr7g0242321 |
| rosa_laevigata | RLG00000000899 |
| rosa_multiflora | Rmu_sc0000429.1_g000043 |
| rosa_roxburghii | Rroxscaffold_3G00222770 |
| rosa_rugosa | Rorug07G0314800 |
| rosa_samantha | Rh7AG470400 Rh7BG440400 Rh7CG487000 Rh7DG455400 |
| rosa_wichuraiana | Rw0G009500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 46, 270 |
| AclI | AACGTT | 1 cut(s) | 9 |
| AcuI | CTGAAG | 1 cut(s) | 87 |
| AflIII | ACRYGT | 1 cut(s) | 400 |
| AjnI | CCWGG | 1 cut(s) | 151 |
| AluBI | AGCT | 3 cut(s) | 219, 231, 417 |
| AluI | AGCT | 3 cut(s) | 219, 231, 417 |
| Alw21I | GWGCWC | 1 cut(s) | 233 |
| Alw26I | GTCTC | 2 cut(s) | 188, 337 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 160 |
| AsuHPI | GGTGA | 1 cut(s) | 94 |
| BanII | GRGCYC | 1 cut(s) | 233 |
| BbsI | GAAGAC | 1 cut(s) | 228 |
| Bbv12I | GWGCWC | 1 cut(s) | 233 |
| BceAI | ACGGC | 1 cut(s) | 321 |
| BciT130I | CCWGG | 1 cut(s) | 153 |
| BcoDI | GTCTC | 2 cut(s) | 188, 337 |
| BfaI | CTAG | 2 cut(s) | 198, 426 |
| BfmI | CTRYAG | 1 cut(s) | 214 |
| Bme1390I | CCNGG | 1 cut(s) | 153 |
| BmrFI | CCNGG | 1 cut(s) | 153 |
| BpiI | GAAGAC | 1 cut(s) | 228 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 170, 202 |
| BpuEI | CTTGAG | 1 cut(s) | 205 |
| BseBI | CCWGG | 1 cut(s) | 153 |
| BseGI | GGATG | 1 cut(s) | 130 |
| BseRI | GAGGAG | 3 cut(s) | 256, 325, 339 |
| BsiHKAI | GWGCWC | 1 cut(s) | 233 |
| BsmAI | GTCTC | 2 cut(s) | 188, 337 |
| Bsp1286I | GDGCHC | 1 cut(s) | 233 |
| Bsp143I | GATC | 3 cut(s) | 38, 89, 372 |
| BspACI | CCGC | 2 cut(s) | 46, 270 |
| BssMI | GATC | 3 cut(s) | 38, 89, 372 |
| Bst2UI | CCWGG | 1 cut(s) | 153 |
| Bst4CI | ACNGT | 2 cut(s) | 82, 368 |
| Bst6I | CTCTTC | 2 cut(s) | 80, 331 |
| BstF5I | GGATG | 1 cut(s) | 130 |
| BstKTI | GATC | 3 cut(s) | 41, 92, 375 |
| BstMAI | GTCTC | 2 cut(s) | 188, 337 |
| BstMBI | GATC | 3 cut(s) | 38, 89, 372 |
| BstNI | CCWGG | 1 cut(s) | 153 |
| BstNSI | RCATGY | 1 cut(s) | 404 |
| BstSCI | CCNGG | 1 cut(s) | 151 |
| BstSFI | CTRYAG | 1 cut(s) | 214 |
| BstV2I | GAAGAC | 1 cut(s) | 228 |
| BtsCI | GGATG | 1 cut(s) | 130 |
| BtsIMutI | CAGTG | 1 cut(s) | 373 |
| CviAII | CATG | 3 cut(s) | 120, 226, 401 |
| CviJI | RGCY | 4 cut(s) | 219, 231, 245, 417 |
| CviKI_1 | RGCY | 4 cut(s) | 219, 231, 245, 417 |
| DpnI | GATC | 3 cut(s) | 40, 91, 374 |
| DpnII | GATC | 3 cut(s) | 38, 89, 372 |
| Eam1104I | CTCTTC | 2 cut(s) | 80, 331 |
| EarI | CTCTTC | 2 cut(s) | 80, 331 |
| Ecl136II | GAGCTC | 1 cut(s) | 231 |
| Eco24I | GRGCYC | 1 cut(s) | 233 |
| Eco32I | GATATC | 1 cut(s) | 312 |
| Eco53kI | GAGCTC | 1 cut(s) | 231 |
| Eco57I | CTGAAG | 1 cut(s) | 87 |
| EcoICRI | GAGCTC | 1 cut(s) | 231 |
| EcoRII | CCWGG | 1 cut(s) | 151 |
| EcoRV | GATATC | 1 cut(s) | 312 |
| EcoT38I | GRGCYC | 1 cut(s) | 233 |
| FaeI | CATG | 3 cut(s) | 123, 229, 404 |
| FaiI | YATR | 8 cut(s) | 111, 121, 160, 210, 216, 227, 360, 402 |
| FatI | CATG | 3 cut(s) | 119, 225, 400 |
| FokI | GGATG | 1 cut(s) | 117 |
| FriOI | GRGCYC | 1 cut(s) | 233 |
| FspBI | CTAG | 2 cut(s) | 198, 426 |
| Hin1II | CATG | 3 cut(s) | 123, 229, 404 |
| HindIII | AAGCTT | 1 cut(s) | 415 |
| HinfI | GANTC | 6 cut(s) | 59, 73, 95, 181, 281, 287 |
| HphI | GGTGA | 1 cut(s) | 94 |
| Hpy188I | TCNGA | 6 cut(s) | 94, 106, 135, 280, 286, 292 |
| Hpy188III | TCNNGA | 2 cut(s) | 406, 426 |
| Hpy99I | CGWCG | 2 cut(s) | 307, 380 |
| HpyCH4III | ACNGT | 2 cut(s) | 82, 368 |
| HpyCH4IV | ACGT | 1 cut(s) | 9 |
| HpyCH4V | TGCA | 2 cut(s) | 123, 355 |
| HpySE526I | ACGT | 1 cut(s) | 9 |
| Hsp92II | CATG | 3 cut(s) | 123, 229, 404 |
| Kzo9I | GATC | 3 cut(s) | 38, 89, 372 |
| LmnI | GCTCC | 1 cut(s) | 269 |
| LpnPI | CCDG | 2 cut(s) | 138, 165 |
| MaeI | CTAG | 2 cut(s) | 198, 426 |
| MaeII | ACGT | 1 cut(s) | 9 |
| MalI | GATC | 3 cut(s) | 40, 91, 374 |
| MboI | GATC | 3 cut(s) | 38, 89, 372 |
| MboII | GAAGA | 9 cut(s) | 48, 93, 97, 228, 267, 291, 306, 318, 400 |
| MhlI | GDGCHC | 1 cut(s) | 233 |
| MlyI | GAGTC | 1 cut(s) | 190 |
| MnlI | CCTC | 5 cut(s) | 26, 277, 346, 360, 431 |
| MroXI | GAANNNNTTC | 1 cut(s) | 160 |
| MseI | TTAA | 2 cut(s) | 174, 381 |
| MspR9I | CCNGG | 1 cut(s) | 153 |
| MvaI | CCWGG | 1 cut(s) | 153 |
| NdeII | GATC | 3 cut(s) | 38, 89, 372 |
| NlaIII | CATG | 3 cut(s) | 123, 229, 404 |
| NspI | RCATGY | 1 cut(s) | 404 |
| PciI | ACATGT | 1 cut(s) | 400 |
| PdmI | GAANNNNTTC | 1 cut(s) | 160 |
| PfeI | GAWTC | 5 cut(s) | 59, 73, 95, 281, 287 |
| PfoI | TCCNGGA | 1 cut(s) | 151 |
| PleI | GAGTC | 1 cut(s) | 189 |
| PpsI | GAGTC | 1 cut(s) | 189 |
| PscI | ACATGT | 1 cut(s) | 400 |
| Psp124BI | GAGCTC | 1 cut(s) | 233 |
| Psp1406I | AACGTT | 1 cut(s) | 9 |
| Psp6I | CCWGG | 1 cut(s) | 151 |
| PspGI | CCWGG | 1 cut(s) | 151 |
| SacI | GAGCTC | 1 cut(s) | 233 |
| SaqAI | TTAA | 2 cut(s) | 174, 381 |
| Sau3AI | GATC | 3 cut(s) | 38, 89, 372 |
| SchI | GAGTC | 1 cut(s) | 190 |
| ScrFI | CCNGG | 1 cut(s) | 153 |
| SduI | GDGCHC | 1 cut(s) | 233 |
| SetI | ASST | 4 cut(s) | 12, 221, 233, 419 |
| SfcI | CTRYAG | 1 cut(s) | 214 |
| SmlI | CTYRAG | 1 cut(s) | 220 |
| SmoI | CTYRAG | 1 cut(s) | 220 |
| SsiI | CCGC | 2 cut(s) | 46, 270 |
| SspMI | CTAG | 2 cut(s) | 198, 426 |
| SstI | GAGCTC | 1 cut(s) | 233 |
| StyD4I | CCNGG | 1 cut(s) | 151 |
| TaaI | ACNGT | 2 cut(s) | 82, 368 |
| TaiI | ACGT | 1 cut(s) | 12 |
| TaqI | TCGA | 1 cut(s) | 302 |
| TfiI | GAWTC | 5 cut(s) | 59, 73, 95, 281, 287 |
| Tru1I | TTAA | 2 cut(s) | 174, 381 |
| Tru9I | TTAA | 2 cut(s) | 174, 381 |
| TscAI | CASTG | 1 cut(s) | 373 |
| TspDTI | ATGAA | 1 cut(s) | 87 |
| TspRI | CASTG | 1 cut(s) | 373 |
| XbaI | TCTAGA | 1 cut(s) | 425 |
| XceI | RCATGY | 1 cut(s) | 404 |
| XmnI | GAANNNNTTC | 1 cut(s) | 160 |
| XspI | CTAG | 2 cut(s) | 198, 426 |