AT1G45110

Tetrapyrrole (Corrin/Porphyrin) Methylases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0015451
Physical Location & Seq
Forward (+)
17052475 .. 17054827
2353 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G45110.1

Sequence Viewer

Length: 1032 bp
ATGGCGAGAGTTTGTCTTCCTTGTTCTTTCCTTCGTACCTCTACTCTCTCGATTCTCTTCCGTTCACCGATTCTCTCCACAACCGCCGCAATTTCATTTTGCTCGTCGTCGGAGTTCGCCGACTCTGTAGCCAAGGATGATTCAAAACGCGGTCCTCTCAAGCCTGGGCTTTACCTCGTCGGAACTCCAATCGGAAACCTCGAAGATATCACTTTACGTGCGATTCGTGTATTGAGATCTGCGGATGTGATACTCTCTGAGGATACAAGACACTCTGGGAAGTTGCTACAGTATTACAATATTAAAGCTCAGCTTCTTAGTTATCACAAGTTCAACGAGGCTCAGAGAGAACAAGCGGTGTTGACACGGTTGAAACAAGGAGAGATTGTTGCACTTATCAGCGATGCTGGCACACCGGGAATTAGTGATCCCGGTACTCAACTTGCTAAAATGTGTGCGAAAGAAAATATAGATGTGATTCCAATCCCTGGGGCTTGTGCTGTAGTTGCTGCTCTTTCTGCATCTGGTTTGGAGACAGATGAGTTCACATTCGTTGGATTTCTTCCTAAGCATTCTGGAACAAGGAAGGAGAGGCTGATTGTTTCATCAAATGAGACAAGAACACAGATCTTTTATGTTCCCCCTCATAAGTTGTCACAGTTTCTTGAAGAAACAACCCCTTACTTTGGTGAATCAAGGCAATGTGTAATAGCTCGAGAGATTACAAAGCTGCATGAAGAGTTTTGGAGGGGTTCGATAGCGGAAGCCAAGCAAGAGTTTCTGATCCGCCAACCAAAAGGAGAAATCACGCTTTTGATAGAAGGAAAGGAAGAAACCAAAGCTGAAAATCCAACAGAGTCTCAACTTGAAGAAGAGTTGAGAGGCCTGATCTCTGATGGGCATAGCCTTTCCACGGCGGTGAAAACGGTTGCAGAAAGAACATCAATGAGAAAGAAAGAAGTATATTCTCTGGCATTGAAGAAATTCGGGAAGCAGATTCGGGTAGAAGAAGAAGATGAAGCTGATGAGTAA

Protein Analysis

343

Amino Acids

38.05

Weight (kDa)

6.0

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TP_methylase PF00590 57 - 256 6e-32 Tetrapyrrole (Corrin/Porphyrin) Methylases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015451)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45110
fragaria_vesca FvH4_2g39240
malus_domestica MD08G1024000.v1.1 MD15G1021600.v1.1
prunus_persica Prupe.1G373400_v2.0.a1
pyrus_communis pycom15g01790
rosa_chinensis RchiOBHm_Chr6g0301771
rosa_laevigata RLG00000011223
rosa_multiflora Rmu_sc0005454.1_g000021
rosa_roxburghii Rroxscaffold_7G00166420
rosa_rugosa Rorug06G0309500
rosa_samantha Rh6AG421400 Rh6BG428200 Rh6CG434700 Rh6DG421600
rosa_wichuraiana Rw6G036480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 488
AccII CGCG 1 cut(s) 150
AciI CCGC 8 cut(s) 84, 87, 150, 242, 356, 761, 787, 917
AclWI GGATC 2 cut(s) 422, 778
AcsI RAATTY 1 cut(s) 983
AfaI GTAC 2 cut(s) 37, 436
AfiI CCNNNNNNNGG 3 cut(s) 488, 686, 913
AgsI TTSAA 6 cut(s) 144, 334, 373, 668, 869, 979
AjnI CCWGG 2 cut(s) 163, 487
AleI CACNNNNGTG 1 cut(s) 917
AluBI AGCT 6 cut(s) 308, 313, 713, 730, 842, 1022
AluI AGCT 6 cut(s) 308, 313, 713, 730, 842, 1022
Alw26I GTCTC 3 cut(s) 527, 608, 864
AlwI GGATC 2 cut(s) 422, 778
Ama87I CYCGRG 1 cut(s) 714
AoxI GGCC 1 cut(s) 883
ApeKI GCWGC 2 cut(s) 509, 730
ApoI RAATTY 1 cut(s) 983
Asp700I GAANNNNTTC 1 cut(s) 983
AspS9I GGNCC 1 cut(s) 152
AsuC2I CCSGG 2 cut(s) 417, 432
AsuHPI GGTGA 3 cut(s) 57, 701, 931
AvaI CYCGRG 1 cut(s) 714
AvaII GGWCC 1 cut(s) 152
BbsI GAAGAC 1 cut(s) 8
BbvI GCAGC 2 cut(s) 496, 717
BccI CCATC 1 cut(s) 890
BceAI ACGGC 1 cut(s) 930
BciT130I CCWGG 2 cut(s) 165, 489
BciVI GTATCC 1 cut(s) 256
BcnI CCSGG 2 cut(s) 417, 432
BcoDI GTCTC 3 cut(s) 527, 608, 864
BfmI CTRYAG 3 cut(s) 126, 287, 501
BfuI GTATCC 1 cut(s) 256
BglII AGATCT 2 cut(s) 236, 627
BisI GCNGC 3 cut(s) 87, 510, 731
BlpI GCTNAGC 1 cut(s) 309
BlsI GCNGC 3 cut(s) 88, 511, 732
Bme1390I CCNGG 4 cut(s) 165, 417, 432, 489
Bme18I GGWCC 1 cut(s) 152
BmeT110I CYCGRG 1 cut(s) 714
BmgT120I GGNCC 1 cut(s) 152
BmrFI CCNGG 4 cut(s) 165, 417, 432, 489
BmsI GCATC 2 cut(s) 394, 530
BpiI GAAGAC 1 cut(s) 8
Bpu10I CCTNAGC 1 cut(s) 567
Bpu1102I GCTNAGC 1 cut(s) 309
BpuEI CTTGAG 1 cut(s) 143
BpuMI CCSGG 2 cut(s) 417, 432
BsaAI YACGTR 1 cut(s) 218
BsaBI GATNNNNATC 1 cut(s) 482
BsaJI CCNNGG 5 cut(s) 132, 164, 487, 488, 912
BsaXI ACNNNNNCTCC 2 cut(s) 372, 402
Bsc4I CCNNNNNNNGG 3 cut(s) 488, 686, 913
Bse3DI GCAATG 1 cut(s) 707
Bse8I GATNNNNATC 1 cut(s) 482
BseBI CCWGG 2 cut(s) 165, 489
BseDI CCNNGG 5 cut(s) 132, 164, 487, 488, 912
BseGI GGATG 2 cut(s) 142, 250
BseJI GATNNNNATC 1 cut(s) 482
BseLI CCNNNNNNNGG 3 cut(s) 488, 686, 913
BseMI GCAATG 1 cut(s) 707
BseMII CTCAG 3 cut(s) 249, 323, 356
BseXI GCAGC 2 cut(s) 496, 717
Bsh1236I CGCG 1 cut(s) 150
BshFI GGCC 1 cut(s) 885
BsiHKCI CYCGRG 1 cut(s) 714
BsiSI CCGG 2 cut(s) 416, 432
BslI CCNNNNNNNGG 3 cut(s) 488, 686, 913
BsmAI GTCTC 3 cut(s) 527, 608, 864
BsmI GAATGC 1 cut(s) 571
BsnI GGCC 1 cut(s) 885
BsoBI CYCGRG 1 cut(s) 714
Bsp143I GATC 5 cut(s) 236, 427, 627, 783, 888
Bsp1720I GCTNAGC 1 cut(s) 309
BspACI CCGC 8 cut(s) 84, 87, 150, 242, 356, 761, 787, 917
BspANI GGCC 1 cut(s) 885
BspCNI CTCAG 3 cut(s) 250, 322, 355
BspFNI CGCG 1 cut(s) 150
BspPI GGATC 2 cut(s) 422, 778
BsrDI GCAATG 1 cut(s) 707
BssECI CCNNGG 5 cut(s) 132, 164, 487, 488, 912
BssMI GATC 5 cut(s) 236, 427, 627, 783, 888
BssT1I CCWWGG 1 cut(s) 132
Bst2UI CCWGG 2 cut(s) 165, 489
Bst4CI ACNGT 4 cut(s) 291, 369, 660, 928
Bst6I CTCTTC 3 cut(s) 62, 732, 867
BstBAI YACGTR 1 cut(s) 218
BstC8I GCNNGC 1 cut(s) 409
BstDEI CTNAG 5 cut(s) 258, 309, 317, 342, 567
BstDSI CCRYGG 1 cut(s) 912
BstF5I GGATG 2 cut(s) 142, 250
BstFNI CGCG 1 cut(s) 150
BstKTI GATC 5 cut(s) 239, 430, 630, 786, 891
BstMAI GTCTC 3 cut(s) 527, 608, 864
BstMBI GATC 5 cut(s) 236, 427, 627, 783, 888
BstMWI GCNNNNNNNGC 3 cut(s) 408, 506, 518
BstNI CCWGG 2 cut(s) 165, 489
BstSCI CCNGG 4 cut(s) 163, 415, 430, 487
BstSFI CTRYAG 3 cut(s) 126, 287, 501
BstUI CGCG 1 cut(s) 150
BstV1I GCAGC 2 cut(s) 496, 717
BstV2I GAAGAC 1 cut(s) 8
BstX2I RGATCY 2 cut(s) 236, 627
BstYI RGATCY 2 cut(s) 236, 627
BsuI GTATCC 1 cut(s) 256
BsuRI GGCC 1 cut(s) 885
BtgI CCRYGG 1 cut(s) 912
BtgZI GCGATG 1 cut(s) 417
BtsCI GGATG 2 cut(s) 142, 250
Cac8I GCNNGC 1 cut(s) 409
Cfr13I GGNCC 1 cut(s) 152
Csp6I GTAC 2 cut(s) 36, 435
CviAII CATG 1 cut(s) 734
CviQI GTAC 2 cut(s) 36, 435
DdeI CTNAG 5 cut(s) 258, 309, 317, 342, 567
DpnI GATC 5 cut(s) 238, 429, 629, 785, 890
DpnII GATC 5 cut(s) 236, 427, 627, 783, 888
Eam1104I CTCTTC 3 cut(s) 62, 732, 867
EarI CTCTTC 3 cut(s) 62, 732, 867
EciI GGCGGA 1 cut(s) 776
Eco130I CCWWGG 1 cut(s) 132
Eco147I AGGCCT 1 cut(s) 885
Eco32I GATATC 1 cut(s) 208
Eco47I GGWCC 1 cut(s) 152
Eco88I CYCGRG 1 cut(s) 714
EcoRII CCWGG 2 cut(s) 163, 487
EcoRV GATATC 1 cut(s) 208
EcoT14I CCWWGG 1 cut(s) 132
ErhI CCWWGG 1 cut(s) 132
FaeI CATG 1 cut(s) 737
FaiI YATR 6 cut(s) 470, 636, 648, 735, 903, 964
FalI AAGNNNNNCTT 2 cut(s) 297, 329
FatI CATG 1 cut(s) 733
Fnu4HI GCNGC 3 cut(s) 87, 510, 731
FokI GGATG 2 cut(s) 149, 257
Fsp4HI GCNGC 3 cut(s) 87, 510, 731
GluI GCNGC 3 cut(s) 87, 510, 731
HaeIII GGCC 1 cut(s) 885
HapII CCGG 2 cut(s) 416, 432
Hin1II CATG 1 cut(s) 737
HincII GTYRAC 1 cut(s) 363
HindII GTYRAC 1 cut(s) 363
HinfI GANTC 9 cut(s) 52, 70, 122, 140, 223, 478, 692, 857, 997
HpaII CCGG 2 cut(s) 416, 432
HphI GGTGA 3 cut(s) 57, 701, 931
Hpy166II GTNNAC 3 cut(s) 65, 363, 546
Hpy188I TCNGA 7 cut(s) 112, 182, 194, 259, 345, 783, 895
Hpy188III TCNNGA 5 cut(s) 49, 576, 665, 716, 988
Hpy8I GTNNAC 3 cut(s) 65, 363, 546
Hpy99I CGWCG 3 cut(s) 109, 112, 182
HpyAV CCTTC 3 cut(s) 41, 580, 815
HpyCH4III ACNGT 4 cut(s) 291, 369, 660, 928
HpyCH4IV ACGT 1 cut(s) 217
HpyCH4V TGCA 4 cut(s) 392, 521, 733, 932
HpyF10VI GCNNNNNNNGC 3 cut(s) 408, 506, 518
HpyF3I CTNAG 5 cut(s) 258, 309, 317, 342, 567
HpySE526I ACGT 1 cut(s) 217
Hsp92II CATG 1 cut(s) 737
Kzo9I GATC 5 cut(s) 236, 427, 627, 783, 888
Lsp1109I GCAGC 2 cut(s) 496, 717
LweI GCATC 2 cut(s) 394, 530
MaeII ACGT 1 cut(s) 217
MaeIII GTNAC 1 cut(s) 654
MalI GATC 5 cut(s) 238, 429, 629, 785, 890
MboI GATC 5 cut(s) 236, 427, 627, 783, 888
MflI RGATCY 2 cut(s) 236, 627
MluCI AATT 3 cut(s) 90, 420, 983
MlyI GAGTC 2 cut(s) 116, 866
MmeI TCCRAC 4 cut(s) 90, 160, 535, 875
MroXI GAANNNNTTC 1 cut(s) 983
MseI TTAA 1 cut(s) 303
MslI CAYNNNNRTG 1 cut(s) 917
MspI CCGG 2 cut(s) 416, 432
MspR9I CCNGG 4 cut(s) 165, 417, 432, 489
Mva1269I GAATGC 1 cut(s) 571
MvaI CCWGG 2 cut(s) 165, 489
MvnI CGCG 1 cut(s) 150
MwoI GCNNNNNNNGC 3 cut(s) 408, 506, 518
NciI CCSGG 2 cut(s) 417, 432
NdeII GATC 5 cut(s) 236, 427, 627, 783, 888
NlaIII CATG 1 cut(s) 737
NmuCI GTSAC 1 cut(s) 654
OliI CACNNNNGTG 1 cut(s) 917
PaeR7I CTCGAG 1 cut(s) 714
PasI CCCWGGG 1 cut(s) 488
PceI AGGCCT 1 cut(s) 885
PcsI WCGNNNNNNNCGW 2 cut(s) 198, 223
PctI GAATGC 1 cut(s) 571
PdmI GAANNNNTTC 1 cut(s) 983
PfeI GAWTC 7 cut(s) 52, 70, 140, 223, 478, 692, 997
PflMI CCANNNNNTGG 1 cut(s) 488
PkrI GCNGC 3 cut(s) 88, 511, 732
PleI GAGTC 2 cut(s) 116, 865
PpsI GAGTC 2 cut(s) 116, 865
Ppu21I YACGTR 1 cut(s) 218
Psp6I CCWGG 2 cut(s) 163, 487
PspGI CCWGG 2 cut(s) 163, 487
PspPI GGNCC 1 cut(s) 152
PsuI RGATCY 2 cut(s) 236, 627
RsaI GTAC 2 cut(s) 37, 436
RsaNI GTAC 2 cut(s) 36, 435
RseI CAYNNNNRTG 1 cut(s) 917
SaqAI TTAA 1 cut(s) 303
SatI GCNGC 3 cut(s) 87, 510, 731
Sau3AI GATC 5 cut(s) 236, 427, 627, 783, 888
Sau96I GGNCC 1 cut(s) 152
SchI GAGTC 2 cut(s) 116, 866
ScrFI CCNGG 4 cut(s) 165, 417, 432, 489
SfaNI GCATC 2 cut(s) 394, 530
SfcI CTRYAG 3 cut(s) 126, 287, 501
Sfr274I CTCGAG 1 cut(s) 714
SinI GGWCC 1 cut(s) 152
SlaI CTCGAG 1 cut(s) 714
SmiMI CAYNNNNRTG 1 cut(s) 917
SmlI CTYRAG 2 cut(s) 158, 714
SmoI CTYRAG 2 cut(s) 158, 714
Sse9I AATT 3 cut(s) 90, 420, 983
SseBI AGGCCT 1 cut(s) 885
SsiI CCGC 8 cut(s) 84, 87, 150, 242, 356, 761, 787, 917
SspI AATATT 1 cut(s) 301
StuI AGGCCT 1 cut(s) 885
StyD4I CCNGG 4 cut(s) 163, 415, 430, 487
StyI CCWWGG 1 cut(s) 132
TaaI ACNGT 4 cut(s) 291, 369, 660, 928
TaiI ACGT 1 cut(s) 220
TaqI TCGA 4 cut(s) 50, 201, 715, 755
TasI AATT 3 cut(s) 90, 420, 983
TauI GCSGC 1 cut(s) 89
TfiI GAWTC 7 cut(s) 52, 70, 140, 223, 478, 692, 997
Tru1I TTAA 1 cut(s) 303
Tru9I TTAA 1 cut(s) 303
TseFI GTSAC 1 cut(s) 654
TseI GCWGC 2 cut(s) 509, 730
Tsp45I GTSAC 1 cut(s) 654
TspDTI ATGAA 4 cut(s) 84, 594, 750, 1032
TspGWI ACGGA 1 cut(s) 50
Van91I CCANNNNNTGG 1 cut(s) 488
VpaK11BI GGWCC 1 cut(s) 152
XapI RAATTY 1 cut(s) 983
XhoI CTCGAG 1 cut(s) 714
XmnI GAANNNNTTC 1 cut(s) 983
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.