AT1G49710

fucosylation

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
18391273 .. 18394030
2758 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G49710.1

Sequence Viewer

Length: 1542 bp
ATGGGTGTTTTCTCGAATCTTCGAGGACCCAGAGCCGGAGCTACCCACGATGAATTTCCGGCGACCAATGGCTCTCCTTCGTCTTCTTCTTCTCCATCTTCATCAATCAAGCGAAAATTATCGAATTTGTTACCACTCTGCGTTGCTCTGGTAGTTATCGCTGAGATCGGGTTTCTGGGTCGGCTCGATAAAGTCGCTTTGGTTGATACGTTGACTGATTTCTTCACCCAGTCTCCGTCACTCTCGCAGTCTCCACCGGCGAGATCCGATCGGAAGAAGATCGGATTATTTACTGATAGGAGCTGCGAGGAGTGGTTGATGAGAGAAGATTCAGTTACTTACTCTAGAGATTTTACTAAAGATCCAATTTTTATCTCTGGTGGTGAAAAGGACTTTCAATGGTGTTCTGTGGATTGTACATTTGGAGATAGTTCAGGGAAAACACCAGATGCTGCGTTTGGATTAGGTCAGAAACCTGGAACTCTTAGTATAATACGTTCCATGGAATCAGCACAGTATTATCCAGAAAATGATCTTGCACAGGCACGACGGAGAGGTTATGATATAGTGATGACCACTAGTCTATCATCAGATGTTCCTGTTGGATATTTTTCGTGGGCGGAGTATGATATTATGTCTCCGGTACAGCCAAAAACTGAGAGAGCTATTGCAGCTGCTTTTATTTCTAATTGTGGTGCTCGGAATTTTCGTCTACAAGCACTTGAGGCATTGATGAAAACTAACATTAAGATTGATTCTTATGGTGGTTGTCATCGAAACCGGGATGGGAAAGTTGACAAGGTTGAAGCTCTTAAGCGATACAAATTCAGTTTGGCTTTTGAGAATACTAACGAGGAAGATTATGTCACCGAGAAGTTCTTTCAATCCTTAGTTGCTGGGTCCGTCCCCGTGGTAGTTGGTCCTCCAAATATAGAAGAATTTGCGCCTGCTTCGGACTCATTCCTTCACATTAAGACTATGGAAGATGTAGAGCCAGTTGCAAAGAGAATGAAGTATCTCGCAGCTAACCCTGCTGCTTATAATCAGACACTAAGATGGAAATACGAGGGTCCTTCAGATTCTTTCAAGGCACTTGTTGATATGGCTGCTGTACACTCTTCTTGCCGTCTCTGCATTTTCCTGGCCACGAGGGTCCGAGAACAAGAAGAGGAAAGCCCTAATTTCAAGAAACGACCGTGCAAATGTAGCAGGGGAGGATCAGACACAGTTTATCATGTTTTTGTTAGAGAAAGAGGCCGGTTTGAAATGGAATCAGTCTTTTTGAGGGGTAAAAGTGTGACTCAGGAAGCTCTAGAATCTGCAGTTCTCGCCAAGTTCAAGTCTTTAAAACATGAGGCAGTGTGGAAGAAGGAAAGGCCTGGAAACTTAAAAGGAGACAAAGAGCTTAAAATACATCGGATTTACCCGCTTGGCCTAACGCAACGACAGGCTTTGTACAACTTCAAATTCGAGGGAAATTCGAGTCTAAGTAGTCACATTCAAAACAACCCTTGTGCTAAATTTGAGGTTGTCTTCGTCTAG

Protein Analysis

513

Amino Acids

57.31

Weight (kDa)

8.69

Isoelectric Point (pI)

48.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_10 PF00852 222 - 386 2.2e-34 Glycosyltransferase family 10 (fucosyltransferase) C-term
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1041
AccI GTMKAC 1 cut(s) 712
AciI CCGC 2 cut(s) 620, 1427
AclWI GGATC 3 cut(s) 258, 356, 1225
AcoI YGGCCR 1 cut(s) 1143
AcsI RAATTY 8 cut(s) 53, 124, 703, 824, 938, 1466, 1477, 1520
AcuI CTGAAG 1 cut(s) 1059
AfaI GTAC 4 cut(s) 418, 645, 1113, 1457
AfiI CCNNNNNNNGG 1 cut(s) 35
AflII CTTAAG 1 cut(s) 812
AgsI TTSAA 9 cut(s) 398, 806, 884, 1087, 1186, 1265, 1339, 1465, 1502
AhdI GACNNNNNGTC 1 cut(s) 579
AhlI ACTAGT 1 cut(s) 578
AjnI CCWGG 3 cut(s) 475, 1140, 1378
AluBI AGCT 8 cut(s) 41, 303, 665, 674, 809, 1025, 1310, 1405
AluI AGCT 8 cut(s) 41, 303, 665, 674, 809, 1025, 1310, 1405
Alw21I GWGCWC 1 cut(s) 700
Alw26I GTCTC 5 cut(s) 237, 255, 642, 1133, 1389
AlwI GGATC 3 cut(s) 258, 356, 1225
AlwNI CAGNNNCTG 1 cut(s) 452
AoxI GGCC 4 cut(s) 1143, 1255, 1376, 1432
ApeKI GCWGC 7 cut(s) 303, 452, 671, 674, 1022, 1034, 1106
ApoI RAATTY 8 cut(s) 53, 124, 703, 824, 938, 1466, 1477, 1520
AspLEI GCGC 1 cut(s) 946
AspS9I GGNCC 5 cut(s) 26, 900, 920, 1070, 1153
AsuC2I CCSGG 1 cut(s) 782
AsuHPI GGTGA 3 cut(s) 217, 395, 859
AvaII GGWCC 5 cut(s) 26, 900, 920, 1070, 1153
BalI TGGCCA 1 cut(s) 1145
BauI CACGAG 1 cut(s) 1147
BbsI GAAGAC 2 cut(s) 75, 1525
Bbv12I GWGCWC 1 cut(s) 700
BbvI GCAGC 7 cut(s) 290, 439, 661, 683, 1021, 1034, 1093
BccI CCATC 3 cut(s) 103, 779, 1050
BceAI ACGGC 1 cut(s) 1110
BciT130I CCWGG 3 cut(s) 477, 1142, 1380
BcnI CCSGG 1 cut(s) 782
BcoDI GTCTC 5 cut(s) 237, 255, 642, 1133, 1389
BcuI ACTAGT 1 cut(s) 578
BfaI CTAG 4 cut(s) 345, 579, 1313, 1540
BfmI CTRYAG 1 cut(s) 1320
BfrI CTTAAG 1 cut(s) 812
BisI GCNGC 7 cut(s) 304, 453, 672, 675, 1023, 1035, 1107
BlsI GCNGC 7 cut(s) 305, 454, 673, 676, 1024, 1036, 1108
Bme1390I CCNGG 4 cut(s) 477, 782, 1142, 1380
Bme18I GGWCC 5 cut(s) 26, 900, 920, 1070, 1153
BmeRI GACNNNNNGTC 1 cut(s) 579
BmgT120I GGNCC 5 cut(s) 26, 900, 920, 1070, 1153
BmiI GGNNCC 4 cut(s) 28, 901, 1071, 1154
BmrFI CCNGG 4 cut(s) 477, 782, 1142, 1380
BmrI ACTGGG 1 cut(s) 223
BmsI GCATC 1 cut(s) 439
BmuI ACTGGG 1 cut(s) 223
BpiI GAAGAC 2 cut(s) 75, 1525
BpuEI CTTGAG 1 cut(s) 743
BpuMI CCSGG 1 cut(s) 782
BsaJI CCNNGG 2 cut(s) 501, 909
BsaWI WCCGGW 1 cut(s) 640
BsaXI ACNNNNNCTCC 2 cut(s) 217, 247
Bsc4I CCNNNNNNNGG 1 cut(s) 35
Bse118I RCCGGY 2 cut(s) 256, 1257
Bse1I ACTGG 2 cut(s) 229, 995
BseBI CCWGG 3 cut(s) 477, 1142, 1380
BseDI CCNNGG 2 cut(s) 501, 909
BseGI GGATG 1 cut(s) 790
BseLI CCNNNNNNNGG 1 cut(s) 35
BseMII CTCAG 3 cut(s) 153, 648, 1316
BseNI ACTGG 2 cut(s) 229, 995
BseRI GAGGAG 1 cut(s) 323
BseXI GCAGC 7 cut(s) 290, 439, 661, 683, 1021, 1034, 1093
BseYI CCCAGC 1 cut(s) 896
Bsh1285I CGRYCG 2 cut(s) 271, 1196
BshFI GGCC 4 cut(s) 1145, 1257, 1378, 1434
BsiEI CGRYCG 2 cut(s) 271, 1196
BsiHKAI GWGCWC 1 cut(s) 700
BsiSI CCGG 6 cut(s) 36, 59, 257, 641, 781, 1258
BslFI GGGAC 1 cut(s) 890
BslI CCNNNNNNNGG 1 cut(s) 35
BsmAI GTCTC 5 cut(s) 237, 255, 642, 1133, 1389
BsmBI CGTCTC 1 cut(s) 1133
BsmFI GGGAC 1 cut(s) 890
BsnI GGCC 4 cut(s) 1145, 1257, 1378, 1434
Bsp1286I GDGCHC 1 cut(s) 700
Bsp1407I TGTACA 3 cut(s) 416, 1111, 1455
Bsp143I GATC 7 cut(s) 165, 263, 268, 279, 361, 532, 1217
Bsp19I CCATGG 1 cut(s) 501
BspACI CCGC 2 cut(s) 620, 1427
BspANI GGCC 4 cut(s) 1145, 1257, 1378, 1434
BspCNI CTCAG 3 cut(s) 154, 649, 1315
BspLI GGNNCC 4 cut(s) 28, 901, 1071, 1154
BspMAI CTGCAG 1 cut(s) 1324
BspPI GGATC 3 cut(s) 258, 356, 1225
BspTI CTTAAG 1 cut(s) 812
BsrFI RCCGGY 2 cut(s) 256, 1257
BsrGI TGTACA 3 cut(s) 416, 1111, 1455
BsrI ACTGG 2 cut(s) 229, 995
BssAI RCCGGY 2 cut(s) 256, 1257
BssECI CCNNGG 2 cut(s) 501, 909
BssMI GATC 7 cut(s) 165, 263, 268, 279, 361, 532, 1217
BssSI CACGAG 1 cut(s) 1147
BssT1I CCWWGG 1 cut(s) 501
Bst2BI CACGAG 1 cut(s) 1147
Bst2UI CCWGG 3 cut(s) 477, 1142, 1380
Bst4CI ACNGT 3 cut(s) 516, 1197, 1228
Bst6I CTCTTC 2 cut(s) 1123, 1161
BstAFI CTTAAG 1 cut(s) 812
BstAUI TGTACA 3 cut(s) 416, 1111, 1455
BstC8I GCNNGC 1 cut(s) 948
BstDEI CTNAG 7 cut(s) 162, 485, 657, 889, 1052, 1302, 1487
BstDSI CCRYGG 2 cut(s) 501, 909
BstF5I GGATG 1 cut(s) 790
BstHHI GCGC 1 cut(s) 946
BstKTI GATC 7 cut(s) 168, 266, 271, 282, 364, 535, 1220
BstMAI GTCTC 5 cut(s) 237, 255, 642, 1133, 1389
BstMBI GATC 7 cut(s) 165, 263, 268, 279, 361, 532, 1217
BstMCI CGRYCG 2 cut(s) 271, 1196
BstMWI GCNNNNNNNGC 6 cut(s) 671, 725, 1031, 1131, 1206, 1328
BstNI CCWGG 3 cut(s) 477, 1142, 1380
BstSCI CCNGG 4 cut(s) 475, 780, 1140, 1378
BstSFI CTRYAG 1 cut(s) 1320
BstV1I GCAGC 7 cut(s) 290, 439, 661, 683, 1021, 1034, 1093
BstV2I GAAGAC 2 cut(s) 75, 1525
BstX2I RGATCY 2 cut(s) 263, 361
BstYI RGATCY 2 cut(s) 263, 361
BsuRI GGCC 4 cut(s) 1145, 1257, 1378, 1434
BtgI CCRYGG 2 cut(s) 501, 909
BtsCI GGATG 1 cut(s) 790
BtsI GCAGTG 1 cut(s) 1365
BtsIMutI CAGTG 1 cut(s) 1365
Cac8I GCNNGC 1 cut(s) 948
CaiI CAGNNNCTG 1 cut(s) 452
CfoI GCGC 1 cut(s) 946
Cfr10I RCCGGY 2 cut(s) 256, 1257
Cfr13I GGNCC 5 cut(s) 26, 900, 920, 1070, 1153
Csp6I GTAC 4 cut(s) 417, 644, 1112, 1456
CviAII CATG 3 cut(s) 502, 1235, 1352
CviQI GTAC 4 cut(s) 417, 644, 1112, 1456
DdeI CTNAG 7 cut(s) 162, 485, 657, 889, 1052, 1302, 1487
DpnI GATC 7 cut(s) 167, 265, 270, 281, 363, 534, 1219
DpnII GATC 7 cut(s) 165, 263, 268, 279, 361, 532, 1217
DraI TTTAAA 1 cut(s) 1347
DriI GACNNNNNGTC 1 cut(s) 579
EaeI YGGCCR 1 cut(s) 1143
Eam1104I CTCTTC 2 cut(s) 1123, 1161
Eam1105I GACNNNNNGTC 1 cut(s) 579
EarI CTCTTC 2 cut(s) 1123, 1161
EciI GGCGGA 1 cut(s) 635
Eco130I CCWWGG 1 cut(s) 501
Eco147I AGGCCT 1 cut(s) 1378
Eco47I GGWCC 5 cut(s) 26, 900, 920, 1070, 1153
Eco57I CTGAAG 1 cut(s) 1059
EcoO109I RGGNCCY 2 cut(s) 26, 1070
EcoRII CCWGG 3 cut(s) 475, 1140, 1378
EcoT14I CCWWGG 1 cut(s) 501
ErhI CCWWGG 1 cut(s) 501
Esp3I CGTCTC 1 cut(s) 1133
FaeI CATG 3 cut(s) 505, 1238, 1355
FaqI GGGAC 1 cut(s) 890
FatI CATG 3 cut(s) 501, 1234, 1351
FauI CCCGC 1 cut(s) 1434
FblI GTMKAC 1 cut(s) 712
Fnu4HI GCNGC 7 cut(s) 304, 453, 672, 675, 1023, 1035, 1107
FokI GGATG 1 cut(s) 797
Fsp4HI GCNGC 7 cut(s) 304, 453, 672, 675, 1023, 1035, 1107
FspBI CTAG 4 cut(s) 345, 579, 1313, 1540
GlaI GCGC 1 cut(s) 945
GluI GCNGC 7 cut(s) 304, 453, 672, 675, 1023, 1035, 1107
GsaI CCCAGC 1 cut(s) 900
HaeIII GGCC 4 cut(s) 1145, 1257, 1378, 1434
HapII CCGG 6 cut(s) 36, 59, 257, 641, 781, 1258
HhaI GCGC 1 cut(s) 946
Hin1II CATG 3 cut(s) 505, 1238, 1355
Hin6I GCGC 1 cut(s) 944
HinP1I GCGC 1 cut(s) 944
HincII GTYRAC 2 cut(s) 213, 796
HindII GTYRAC 2 cut(s) 213, 796
HpaII CCGG 6 cut(s) 36, 59, 257, 641, 781, 1258
HphI GGTGA 3 cut(s) 217, 395, 859
Hpy166II GTNNAC 4 cut(s) 213, 713, 796, 1114
Hpy188III TCNNGA 6 cut(s) 13, 345, 524, 1186, 1304, 1313
Hpy8I GTNNAC 4 cut(s) 213, 713, 796, 1114
Hpy99I CGWCG 1 cut(s) 552
HpyAV CCTTC 4 cut(s) 87, 974, 1083, 1363
HpyCH4III ACNGT 3 cut(s) 516, 1197, 1228
HpyCH4IV ACGT 2 cut(s) 209, 496
HpyCH4V TGCA 6 cut(s) 539, 671, 1001, 1134, 1200, 1322
HpyF10VI GCNNNNNNNGC 6 cut(s) 671, 725, 1031, 1131, 1206, 1328
HpyF3I CTNAG 7 cut(s) 162, 485, 657, 889, 1052, 1302, 1487
HpySE526I ACGT 2 cut(s) 209, 496
Hsp92II CATG 3 cut(s) 505, 1238, 1355
HspAI GCGC 1 cut(s) 944
Kzo9I GATC 7 cut(s) 165, 263, 268, 279, 361, 532, 1217
LmnI GCTCC 2 cut(s) 38, 300
Lsp1109I GCAGC 7 cut(s) 290, 439, 661, 683, 1021, 1034, 1093
LweI GCATC 1 cut(s) 439
MaeI CTAG 4 cut(s) 345, 579, 1313, 1540
MaeII ACGT 2 cut(s) 209, 496
MaeIII GTNAC 6 cut(s) 129, 237, 334, 865, 1297, 1493
MalI GATC 7 cut(s) 167, 265, 270, 281, 363, 534, 1219
MboI GATC 7 cut(s) 165, 263, 268, 279, 361, 532, 1217
MflI RGATCY 2 cut(s) 263, 361
MhlI GDGCHC 1 cut(s) 700
MlsI TGGCCA 1 cut(s) 1145
MluNI TGGCCA 1 cut(s) 1145
MlyI GAGTC 3 cut(s) 950, 1294, 1492
MmeI TCCRAC 1 cut(s) 583
Mox20I TGGCCA 1 cut(s) 1145
MscI TGGCCA 1 cut(s) 1145
MseI TTAA 6 cut(s) 747, 813, 972, 1346, 1388, 1407
MslI CAYNNNNRTG 1 cut(s) 1054
Msp20I TGGCCA 1 cut(s) 1145
MspA1I CMGCKG 1 cut(s) 674
MspCI CTTAAG 1 cut(s) 812
MspI CCGG 6 cut(s) 36, 59, 257, 641, 781, 1258
MspR9I CCNGG 4 cut(s) 477, 782, 1142, 1380
MvaI CCWGG 3 cut(s) 477, 1142, 1380
MwoI GCNNNNNNNGC 6 cut(s) 671, 725, 1031, 1131, 1206, 1328
NciI CCSGG 1 cut(s) 782
NcoI CCATGG 1 cut(s) 501
NdeII GATC 7 cut(s) 165, 263, 268, 279, 361, 532, 1217
NlaIII CATG 3 cut(s) 505, 1238, 1355
NlaIV GGNNCC 4 cut(s) 28, 901, 1071, 1154
NmuCI GTSAC 4 cut(s) 237, 865, 1297, 1493
PceI AGGCCT 1 cut(s) 1378
PcsI WCGNNNNNNNCGW 1 cut(s) 706
PfeI GAWTC 7 cut(s) 16, 329, 506, 755, 1079, 1271, 1316
PkrI GCNGC 7 cut(s) 305, 454, 673, 676, 1024, 1036, 1108
Ple19I CGATCG 1 cut(s) 271
PleI GAGTC 3 cut(s) 950, 1294, 1491
PpsI GAGTC 3 cut(s) 950, 1294, 1491
PpuMI RGGWCCY 2 cut(s) 26, 1070
PsiI TTATAA 1 cut(s) 1041
Psp5II RGGWCCY 2 cut(s) 26, 1070
Psp6I CCWGG 3 cut(s) 475, 1140, 1378
PspFI CCCAGC 1 cut(s) 896
PspGI CCWGG 3 cut(s) 475, 1140, 1378
PspN4I GGNNCC 4 cut(s) 28, 901, 1071, 1154
PspPI GGNCC 5 cut(s) 26, 900, 920, 1070, 1153
PspPPI RGGWCCY 2 cut(s) 26, 1070
PsrI GAACNNNNNNTAC 2 cut(s) 481, 513
PstI CTGCAG 1 cut(s) 1324
PstNI CAGNNNCTG 1 cut(s) 452
PsuI RGATCY 2 cut(s) 263, 361
PvuI CGATCG 1 cut(s) 271
PvuII CAGCTG 1 cut(s) 674
RsaI GTAC 4 cut(s) 418, 645, 1113, 1457
RsaNI GTAC 4 cut(s) 417, 644, 1112, 1456
RseI CAYNNNNRTG 1 cut(s) 1054
SaqAI TTAA 6 cut(s) 747, 813, 972, 1346, 1388, 1407
SatI GCNGC 7 cut(s) 304, 453, 672, 675, 1023, 1035, 1107
Sau3AI GATC 7 cut(s) 165, 263, 268, 279, 361, 532, 1217
Sau96I GGNCC 5 cut(s) 26, 900, 920, 1070, 1153
SchI GAGTC 3 cut(s) 950, 1294, 1492
ScrFI CCNGG 4 cut(s) 477, 782, 1142, 1380
SduI GDGCHC 1 cut(s) 700
SfaNI GCATC 1 cut(s) 439
SfcI CTRYAG 1 cut(s) 1320
SgrAI CRCCGGYG 1 cut(s) 256
SinI GGWCC 5 cut(s) 26, 900, 920, 1070, 1153
SmiMI CAYNNNNRTG 1 cut(s) 1054
SmlI CTYRAG 2 cut(s) 722, 812
SmoI CTYRAG 2 cut(s) 722, 812
SpeI ACTAGT 1 cut(s) 578
SseBI AGGCCT 1 cut(s) 1378
SsiI CCGC 2 cut(s) 620, 1427
SspMI CTAG 4 cut(s) 345, 579, 1313, 1540
StuI AGGCCT 1 cut(s) 1378
StyD4I CCNGG 4 cut(s) 475, 780, 1140, 1378
StyI CCWWGG 1 cut(s) 501
TaaI ACNGT 3 cut(s) 516, 1197, 1228
TaiI ACGT 2 cut(s) 212, 499
TaqI TCGA 7 cut(s) 14, 22, 122, 186, 775, 1470, 1481
TatI WGTACW 3 cut(s) 416, 1111, 1455
TfiI GAWTC 7 cut(s) 16, 329, 506, 755, 1079, 1271, 1316
Tru1I TTAA 6 cut(s) 747, 813, 972, 1346, 1388, 1407
Tru9I TTAA 6 cut(s) 747, 813, 972, 1346, 1388, 1407
TscAI CASTG 1 cut(s) 1365
TseFI GTSAC 4 cut(s) 237, 865, 1297, 1493
TseI GCWGC 7 cut(s) 303, 452, 671, 674, 1022, 1034, 1106
Tsp45I GTSAC 4 cut(s) 237, 865, 1297, 1493
TspDTI ATGAA 4 cut(s) 66, 90, 749, 1025
TspGWI ACGGA 3 cut(s) 225, 565, 892
TspRI CASTG 1 cut(s) 1365
Vha464I CTTAAG 1 cut(s) 812
VpaK11BI GGWCC 5 cut(s) 26, 900, 920, 1070, 1153
XapI RAATTY 8 cut(s) 53, 124, 703, 824, 938, 1466, 1477, 1520
XbaI TCTAGA 2 cut(s) 344, 1312
XmiI GTMKAC 1 cut(s) 712
XspI CTAG 4 cut(s) 345, 579, 1313, 1540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.