AT3G19280

fucosylation

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
6681196 .. 6684029
2834 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G19280.1

Sequence Viewer

Length: 1506 bp
ATGGGTGTTTTCTCCAATCTTCGAGGTCCTAAAATTGGATTGACCCATGAAGAATTGCCTGTAGTAGCCAATGGCTCTACTTCTTCTTCTTCGTCTCCTTCCTCTTTCAAGCGTAAAGTCTCGACCTTTTTGCCAATCTGCGTGGCTCTTGTCGTCATTATCGAGATCGGGTTCCTCTGTCGGCTCGATAACGCTTCTTTGGTCGATACGTTAACCCATTTTTTCACCAAGTCGTCGTCCGATTTGAAAGTTGGGTCAGGAATAGAGAAATGCCAGGAGTGGTTAGAGAGAGTGGATTCAGTTACTTATTCTAGAGATTTCACTAAAGATCCGATTTTTATCTCTGGTAGTAACAAGGACTTCAAATCGTGCTCTGTTGATTGTGTAATGGGATTCACTTCAGATAAGAAACCTGATGCGGCTTTTGGATTAAGTCATCAACCTGGAACACTCAGTATAATCCGTTCCATGGAATCAGCACAGTATTACCAAGAGAATAATCTTGCTCAAGCACGACGGAAAGGTTATGATATTGTGATGACAACTAGTCTGTCATCAGATGTTCCTGTTGGGTATTTTTCATGGGCGGAATATGATATTATGGCTCCAGTGCAACCAAAAACAGAGAAAGCTCTTGCTGCTGCTTTTATTTCCAATTGCGCCGCTCGGAATTTCCGCCTGCAAGCTCTTGAAGCCTTAATGAAGACGAATGTTAAGATTGATTCTTATGGTGGTTGTCACCGGAATCGGGATGGGAGTGTGGAGAAGGTTGAAGCTCTTAAGCACTACAAATTCAGTCTAGCTTTTGAGAACACCAACGAGGAGGATTATGTCACAGAGAAGTTCTTCCAATCTCTAGTCGCTGGATCTGTCCCTGTGGTTGTTGGAGCTCCAAATATAGAAGAATTTGCACCTTCTCCTGACTCATTCCTTCACATTAAGCAGATGGATGATGTCAAGGCAGTTGCAAAGAAAATGAAGTATCTTGCGGATAACCCTGACGCCTATAATCAGACGCTAAGATGGAAACATGAAGGCCCTTCAGATTCTTTTAAGGCACTTATTGATATGGCTGCTGTACACTCTTCTTGTCGTCTCTGCATCTTTGTGGCTACAAGGATTCGTGAGCAAGAAGAGAAGAGCCCTGAGTTTAAGAGACGACCCTGCAAATGCACCAGAGGCTCAGAGACAGTTTATCATTTGTATGTTAGAGAAAGAGGACGGTTTGACATGGAATCCATCTTCTTGAAGGATGGAAATCTGACTCTGGAAGCTCTGGAATCTGCGGTTCTTGCGAAGTTCATGTCTCTGAGATATGAACCAATATGGAAGAAGGAAAGACCCGCGAGCTTAAGAGGAGACGGCAAGCTTAGAGTACATGGGATATATCCTATTGGTCTGACTCAAAGACAAGCTCTTTACAACTTCAAATTCGAAGGAAATTCAAGTCTCAGTACTCACATACAGAGAAACCCTTGTCCCAAATTCGAAGTTGTCTTTGTCTAA

Protein Analysis

501

Amino Acids

56.2

Weight (kDa)

8.56

Isoelectric Point (pI)

44.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_10 PF00852 209 - 375 1.6e-35 Glycosyltransferase family 10 (fucosyltransferase) C-term
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 665
AccII CGCG 1 cut(s) 1346
AciI CCGC 7 cut(s) 419, 587, 663, 676, 989, 1286, 1344
AclWI GGATC 2 cut(s) 323, 874
AcsI RAATTY 6 cut(s) 670, 791, 905, 1430, 1441, 1484
AcuI CTGAAG 2 cut(s) 384, 1026
AcyI GRCGYC 1 cut(s) 1002
AfaI GTAC 3 cut(s) 1080, 1377, 1456
AfiI CCNNNNNNNGG 3 cut(s) 35, 469, 748
AflII CTTAAG 2 cut(s) 779, 1351
AgsI TTSAA 8 cut(s) 109, 247, 364, 692, 773, 1249, 1429, 1446
AhdI GACNNNNNGTC 1 cut(s) 546
AhlI ACTAGT 1 cut(s) 545
AjnI CCWGG 2 cut(s) 273, 442
AluBI AGCT 9 cut(s) 632, 686, 776, 803, 890, 1274, 1350, 1369, 1415
AluI AGCT 9 cut(s) 632, 686, 776, 803, 890, 1274, 1350, 1369, 1415
Alw21I GWGCWC 2 cut(s) 374, 892
Alw26I GTCTC 8 cut(s) 99, 124, 1100, 1150, 1181, 1311, 1353, 1454
AlwI GGATC 2 cut(s) 323, 874
AoxI GGCC 1 cut(s) 1036
ApeKI GCWGC 3 cut(s) 638, 641, 1073
ApoI RAATTY 6 cut(s) 670, 791, 905, 1430, 1441, 1484
ArsI GACNNNNNNTTYG 2 cut(s) 1289, 1321
Asp700I GAANNNNTTC 1 cut(s) 845
AspLEI GCGC 1 cut(s) 662
AspS9I GGNCC 2 cut(s) 26, 1037
AsuHPI GGTGA 2 cut(s) 217, 731
AsuII TTCGAA 2 cut(s) 1434, 1488
AvaII GGWCC 1 cut(s) 26
BanII GRGCYC 2 cut(s) 892, 1145
BbsI GAAGAC 1 cut(s) 710
Bbv12I GWGCWC 2 cut(s) 374, 892
BbvI GCAGC 3 cut(s) 625, 628, 1060
BccI CCATC 5 cut(s) 746, 940, 1017, 1247, 1247
BceAI ACGGC 1 cut(s) 1378
BcgI CGANNNNNNTGC 2 cut(s) 112, 146
BciT130I CCWGG 2 cut(s) 275, 444
BcoDI GTCTC 8 cut(s) 99, 124, 1100, 1150, 1181, 1311, 1353, 1454
BcuI ACTAGT 1 cut(s) 545
BfaI CTAG 4 cut(s) 312, 546, 800, 857
BfmI CTRYAG 1 cut(s) 60
BfrI CTTAAG 2 cut(s) 779, 1351
BisI GCNGC 5 cut(s) 420, 639, 642, 663, 1074
BlsI GCNGC 5 cut(s) 421, 640, 643, 664, 1075
BmcAI AGTACT 1 cut(s) 1456
Bme1390I CCNGG 2 cut(s) 275, 444
Bme18I GGWCC 1 cut(s) 26
BmeRI GACNNNNNGTC 1 cut(s) 546
BmgT120I GGNCC 2 cut(s) 26, 1037
BmiI GGNNCC 2 cut(s) 173, 606
BmrFI CCNGG 2 cut(s) 275, 444
BmsI GCATC 2 cut(s) 406, 1110
BpiI GAAGAC 1 cut(s) 710
BpmI CTGGAG 1 cut(s) 591
Bpu14I TTCGAA 2 cut(s) 1434, 1488
BpuEI CTTGAG 1 cut(s) 492
BsaBI GATNNNNATC 2 cut(s) 338, 1257
BsaHI GRCGYC 1 cut(s) 1002
BsaJI CCNNGG 1 cut(s) 468
BsaWI WCCGGW 1 cut(s) 741
Bsc4I CCNNNNNNNGG 3 cut(s) 35, 469, 748
Bse1I ACTGG 1 cut(s) 608
Bse8I GATNNNNATC 2 cut(s) 338, 1257
BseBI CCWGG 2 cut(s) 275, 444
BseDI CCNNGG 1 cut(s) 468
BseGI GGATG 3 cut(s) 757, 955, 1258
BseJI GATNNNNATC 2 cut(s) 338, 1257
BseLI CCNNNNNNNGG 3 cut(s) 35, 469, 748
BseMII CTCAG 5 cut(s) 466, 1137, 1197, 1301, 1465
BseNI ACTGG 1 cut(s) 608
BseRI GAGGAG 2 cut(s) 836, 1371
BseXI GCAGC 3 cut(s) 625, 628, 1060
Bsh1236I CGCG 1 cut(s) 1346
BshFI GGCC 1 cut(s) 1038
BsiHKAI GWGCWC 2 cut(s) 374, 892
BsiSI CCGG 1 cut(s) 742
BslFI GGGAC 2 cut(s) 857, 1464
BslI CCNNNNNNNGG 3 cut(s) 35, 469, 748
BsmAI GTCTC 8 cut(s) 99, 124, 1100, 1150, 1181, 1311, 1353, 1454
BsmBI CGTCTC 4 cut(s) 99, 1100, 1150, 1353
BsmFI GGGAC 2 cut(s) 857, 1464
BsnI GGCC 1 cut(s) 1038
Bsp119I TTCGAA 2 cut(s) 1434, 1488
Bsp1286I GDGCHC 3 cut(s) 374, 892, 1145
Bsp1407I TGTACA 1 cut(s) 1078
Bsp143I GATC 3 cut(s) 165, 328, 866
Bsp19I CCATGG 1 cut(s) 468
BspACI CCGC 7 cut(s) 419, 587, 663, 676, 989, 1286, 1344
BspANI GGCC 1 cut(s) 1038
BspCNI CTCAG 5 cut(s) 465, 1138, 1196, 1302, 1464
BspFNI CGCG 1 cut(s) 1346
BspLI GGNNCC 2 cut(s) 173, 606
BspPI GGATC 2 cut(s) 323, 874
BspQI GCTCTTC 1 cut(s) 1133
BspT104I TTCGAA 2 cut(s) 1434, 1488
BspTI CTTAAG 2 cut(s) 779, 1351
BsrBI CCGCTC 1 cut(s) 665
BsrGI TGTACA 1 cut(s) 1078
BsrI ACTGG 1 cut(s) 608
BssECI CCNNGG 1 cut(s) 468
BssMI GATC 3 cut(s) 165, 328, 866
BssNI GRCGYC 1 cut(s) 1002
BssT1I CCWWGG 1 cut(s) 468
Bst2UI CCWGG 2 cut(s) 275, 444
Bst4CI ACNGT 3 cut(s) 483, 1192, 1224
Bst6I CTCTTC 3 cut(s) 1090, 1128, 1133
BstACI GRCGYC 1 cut(s) 1002
BstAFI CTTAAG 2 cut(s) 779, 1351
BstAUI TGTACA 1 cut(s) 1078
BstBI TTCGAA 2 cut(s) 1434, 1488
BstC8I GCNNGC 4 cut(s) 680, 684, 1348, 1367
BstDEI CTNAG 7 cut(s) 452, 1019, 1146, 1183, 1310, 1370, 1451
BstDSI CCRYGG 1 cut(s) 468
BstF5I GGATG 3 cut(s) 757, 955, 1258
BstFNI CGCG 1 cut(s) 1346
BstHHI GCGC 1 cut(s) 662
BstKTI GATC 3 cut(s) 168, 331, 869
BstMAI GTCTC 8 cut(s) 99, 124, 1100, 1150, 1181, 1311, 1353, 1454
BstMBI GATC 3 cut(s) 165, 328, 866
BstMWI GCNNNNNNNGC 4 cut(s) 638, 692, 1179, 1292
BstNI CCWGG 2 cut(s) 275, 444
BstSCI CCNGG 2 cut(s) 273, 442
BstSFI CTRYAG 1 cut(s) 60
BstUI CGCG 1 cut(s) 1346
BstV1I GCAGC 3 cut(s) 625, 628, 1060
BstV2I GAAGAC 1 cut(s) 710
BstX2I RGATCY 2 cut(s) 328, 866
BstYI RGATCY 2 cut(s) 328, 866
BsuRI GGCC 1 cut(s) 1038
BtgI CCRYGG 1 cut(s) 468
BtsCI GGATG 3 cut(s) 757, 955, 1258
BtsIMutI CAGTG 1 cut(s) 615
Cac8I GCNNGC 4 cut(s) 680, 684, 1348, 1367
CfoI GCGC 1 cut(s) 662
Cfr13I GGNCC 2 cut(s) 26, 1037
CseI GACGC 2 cut(s) 1010, 1024
Csp6I GTAC 3 cut(s) 1079, 1376, 1455
CspCI CAANNNNNGTGG 2 cut(s) 123, 158
CviAII CATG 7 cut(s) 47, 469, 582, 1031, 1231, 1303, 1379
CviQI GTAC 3 cut(s) 1079, 1376, 1455
DdeI CTNAG 7 cut(s) 452, 1019, 1146, 1183, 1310, 1370, 1451
DpnI GATC 3 cut(s) 167, 330, 868
DpnII GATC 3 cut(s) 165, 328, 866
DriI GACNNNNNGTC 1 cut(s) 546
Eam1104I CTCTTC 3 cut(s) 1090, 1128, 1133
Eam1105I GACNNNNNGTC 1 cut(s) 546
EarI CTCTTC 3 cut(s) 1090, 1128, 1133
EciI GGCGGA 2 cut(s) 602, 665
Ecl136II GAGCTC 1 cut(s) 890
Eco130I CCWWGG 1 cut(s) 468
Eco24I GRGCYC 2 cut(s) 892, 1145
Eco47I GGWCC 1 cut(s) 26
Eco53kI GAGCTC 1 cut(s) 890
Eco57I CTGAAG 2 cut(s) 384, 1026
EcoICRI GAGCTC 1 cut(s) 890
EcoO109I RGGNCCY 2 cut(s) 26, 1037
EcoRII CCWGG 2 cut(s) 273, 442
EcoT14I CCWWGG 1 cut(s) 468
EcoT38I GRGCYC 2 cut(s) 892, 1145
ErhI CCWWGG 1 cut(s) 468
Esp3I CGTCTC 4 cut(s) 99, 1100, 1150, 1353
FaeI CATG 7 cut(s) 50, 472, 585, 1034, 1234, 1306, 1382
FaqI GGGAC 2 cut(s) 857, 1464
FatI CATG 7 cut(s) 46, 468, 581, 1030, 1230, 1302, 1378
FauI CCCGC 1 cut(s) 1351
Fnu4HI GCNGC 5 cut(s) 420, 639, 642, 663, 1074
FokI GGATG 3 cut(s) 764, 962, 1265
FriOI GRGCYC 2 cut(s) 892, 1145
Fsp4HI GCNGC 5 cut(s) 420, 639, 642, 663, 1074
FspBI CTAG 4 cut(s) 312, 546, 800, 857
GlaI GCGC 1 cut(s) 661
GluI GCNGC 5 cut(s) 420, 639, 642, 663, 1074
GsuI CTGGAG 1 cut(s) 591
HaeIII GGCC 1 cut(s) 1038
HapII CCGG 1 cut(s) 742
HgaI GACGC 2 cut(s) 1010, 1024
HhaI GCGC 1 cut(s) 662
Hin1I GRCGYC 1 cut(s) 1002
Hin1II CATG 7 cut(s) 50, 472, 585, 1034, 1234, 1306, 1382
Hin6I GCGC 1 cut(s) 660
HinP1I GCGC 1 cut(s) 660
HincII GTYRAC 1 cut(s) 213
HindII GTYRAC 1 cut(s) 213
HindIII AAGCTT 1 cut(s) 1367
HpaI GTTAAC 1 cut(s) 213
HpaII CCGG 1 cut(s) 742
HphI GGTGA 2 cut(s) 217, 731
Hpy166II GTNNAC 2 cut(s) 213, 1081
Hpy8I GTNNAC 2 cut(s) 213, 1081
Hpy99I CGWCG 2 cut(s) 238, 519
HpyAV CCTTC 9 cut(s) 108, 760, 924, 941, 1028, 1050, 1243, 1327, 1430
HpyCH4III ACNGT 3 cut(s) 483, 1192, 1224
HpyCH4IV ACGT 1 cut(s) 209
HpyCH4V TGCA 7 cut(s) 613, 682, 911, 968, 1101, 1167, 1173
HpyF10VI GCNNNNNNNGC 4 cut(s) 638, 692, 1179, 1292
HpyF3I CTNAG 7 cut(s) 452, 1019, 1146, 1183, 1310, 1370, 1451
HpySE526I ACGT 1 cut(s) 209
Hsp92I GRCGYC 1 cut(s) 1002
Hsp92II CATG 7 cut(s) 50, 472, 585, 1034, 1234, 1306, 1382
HspAI GCGC 1 cut(s) 660
KspAI GTTAAC 1 cut(s) 213
Kzo9I GATC 3 cut(s) 165, 328, 866
LguI GCTCTTC 1 cut(s) 1133
LmnI GCTCC 3 cut(s) 610, 887, 895
Lsp1109I GCAGC 3 cut(s) 625, 628, 1060
LweI GCATC 2 cut(s) 406, 1110
MaeI CTAG 4 cut(s) 312, 546, 800, 857
MaeII ACGT 1 cut(s) 209
MaeIII GTNAC 4 cut(s) 301, 350, 737, 832
MalI GATC 3 cut(s) 167, 330, 868
MbiI CCGCTC 1 cut(s) 665
MboI GATC 3 cut(s) 165, 328, 866
MfeI CAATTG 1 cut(s) 655
MflI RGATCY 2 cut(s) 328, 866
MhlI GDGCHC 3 cut(s) 374, 892, 1145
MluCI AATT 9 cut(s) 33, 53, 655, 670, 791, 905, 1430, 1441, 1484
MlyI GAGTC 3 cut(s) 917, 1258, 1396
MmeI TCCRAC 1 cut(s) 865
MnlI CCTC 8 cut(s) 17, 112, 185, 814, 817, 1172, 1211, 1349
MroXI GAANNNNTTC 1 cut(s) 845
MseI TTAA 9 cut(s) 212, 431, 698, 714, 780, 939, 1053, 1152, 1352
MslI CAYNNNNRTG 2 cut(s) 1106, 1203
MspCI CTTAAG 2 cut(s) 779, 1351
MspI CCGG 1 cut(s) 742
MspR9I CCNGG 2 cut(s) 275, 444
MunI CAATTG 1 cut(s) 655
MvaI CCWGG 2 cut(s) 275, 444
MvnI CGCG 1 cut(s) 1346
MwoI GCNNNNNNNGC 4 cut(s) 638, 692, 1179, 1292
NcoI CCATGG 1 cut(s) 468
NdeII GATC 3 cut(s) 165, 328, 866
NlaIII CATG 7 cut(s) 50, 472, 585, 1034, 1234, 1306, 1382
NlaIV GGNNCC 2 cut(s) 173, 606
NmuCI GTSAC 2 cut(s) 737, 832
NspV TTCGAA 2 cut(s) 1434, 1488
PciSI GCTCTTC 1 cut(s) 1133
PcsI WCGNNNNNNNCGW 1 cut(s) 159
PdmI GAANNNNTTC 1 cut(s) 845
PfeI GAWTC 9 cut(s) 296, 393, 473, 722, 745, 1046, 1120, 1235, 1280
PkrI GCNGC 5 cut(s) 421, 640, 643, 664, 1075
PleI GAGTC 3 cut(s) 917, 1258, 1396
PpsI GAGTC 3 cut(s) 917, 1258, 1396
PpuMI RGGWCCY 1 cut(s) 26
Psp124BI GAGCTC 1 cut(s) 892
Psp5II RGGWCCY 1 cut(s) 26
Psp6I CCWGG 2 cut(s) 273, 442
PspGI CCWGG 2 cut(s) 273, 442
PspN4I GGNNCC 2 cut(s) 173, 606
PspPI GGNCC 2 cut(s) 26, 1037
PspPPI RGGWCCY 1 cut(s) 26
PsrI GAACNNNNNNTAC 2 cut(s) 448, 480
PsuI RGATCY 2 cut(s) 328, 866
RsaI GTAC 3 cut(s) 1080, 1377, 1456
RsaNI GTAC 3 cut(s) 1079, 1376, 1455
RseI CAYNNNNRTG 2 cut(s) 1106, 1203
SacI GAGCTC 1 cut(s) 892
SapI GCTCTTC 1 cut(s) 1133
SaqAI TTAA 9 cut(s) 212, 431, 698, 714, 780, 939, 1053, 1152, 1352
SatI GCNGC 5 cut(s) 420, 639, 642, 663, 1074
Sau3AI GATC 3 cut(s) 165, 328, 866
Sau96I GGNCC 2 cut(s) 26, 1037
ScaI AGTACT 1 cut(s) 1456
SchI GAGTC 3 cut(s) 917, 1258, 1396
ScrFI CCNGG 2 cut(s) 275, 444
SduI GDGCHC 3 cut(s) 374, 892, 1145
SfaNI GCATC 2 cut(s) 406, 1110
SfcI CTRYAG 1 cut(s) 60
SfuI TTCGAA 2 cut(s) 1434, 1488
SinI GGWCC 1 cut(s) 26
SmiMI CAYNNNNRTG 2 cut(s) 1106, 1203
SmlI CTYRAG 3 cut(s) 507, 779, 1351
SmoI CTYRAG 3 cut(s) 507, 779, 1351
SpeI ACTAGT 1 cut(s) 545
Sse9I AATT 9 cut(s) 33, 53, 655, 670, 791, 905, 1430, 1441, 1484
SsiI CCGC 7 cut(s) 419, 587, 663, 676, 989, 1286, 1344
SspMI CTAG 4 cut(s) 312, 546, 800, 857
SstI GAGCTC 1 cut(s) 892
StyD4I CCNGG 2 cut(s) 273, 442
StyI CCWWGG 1 cut(s) 468
TaaI ACNGT 3 cut(s) 483, 1192, 1224
TaiI ACGT 1 cut(s) 212
TaqI TCGA 7 cut(s) 22, 122, 162, 186, 204, 1434, 1488
TasI AATT 9 cut(s) 33, 53, 655, 670, 791, 905, 1430, 1441, 1484
TatI WGTACW 3 cut(s) 1078, 1375, 1454
TauI GCSGC 2 cut(s) 422, 665
TfiI GAWTC 9 cut(s) 296, 393, 473, 722, 745, 1046, 1120, 1235, 1280
Tru1I TTAA 9 cut(s) 212, 431, 698, 714, 780, 939, 1053, 1152, 1352
Tru9I TTAA 9 cut(s) 212, 431, 698, 714, 780, 939, 1053, 1152, 1352
TscAI CASTG 1 cut(s) 615
TseFI GTSAC 2 cut(s) 737, 832
TseI GCWGC 3 cut(s) 638, 641, 1073
Tsp45I GTSAC 2 cut(s) 737, 832
TspDTI ATGAA 7 cut(s) 63, 570, 716, 992, 1047, 1291, 1332
TspGWI ACGGA 2 cut(s) 452, 532
TspRI CASTG 1 cut(s) 615
Vha464I CTTAAG 2 cut(s) 779, 1351
VpaK11BI GGWCC 1 cut(s) 26
XapI RAATTY 6 cut(s) 670, 791, 905, 1430, 1441, 1484
XbaI TCTAGA 1 cut(s) 311
XmnI GAANNNNTTC 1 cut(s) 845
XspI CTAG 4 cut(s) 312, 546, 800, 857
ZrmI AGTACT 1 cut(s) 1456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.