Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003301.1

Orthogroup ID

OG0006295

Physical Location & Seq

Genomic Coordinates Reverse (-)

67709 .. 75352

Gene Structure 7644 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003301.1_g000019.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

atgggtgtgttttcttttcacagaggctcgagaacagcgacgacccacgaagccttgccggtctccgccgccggggcttcgccggcgaacaagcgaagatggtccaatcttatgcctttcgtcgtggcccttgtggtcattgcggagatctccttcttgggtaagcttgatttggccaataaagctgctttggtggattcttggacggagttgttcgcgccgagttcgatggtgggtcgtgatgatttgggcctggcgggcaatgatgatttgggcctgctgagttgtgaggaatggttggagagagaggatgccgtggagtattccagagattttgggaaggagcctgttttggttactggggatgagaaggactggaaatcttgttcggtcggatgccagttcggaggcaattccgccagaaaacctgatgcttcttttggtttagctaatcaagatgggacagccagtgttctccgatccatggaatcagctcaatactatgcagagaacaatattaataatgcaagacggaagggttataatatcattatgacaactagtctctcatcggatgttcctgttggatatttttcttgggccgagtacgacatcatggcacctatgcagcctaagactgagaaagcccttgcagctgcatttatttccaactgtggtgctcgcaacttccgcttacaggctcttgaagcacttgaaaaggctaacatcaagatagattcttatggtggttgccacagaaaccgtgatggaaaagtggacaaagtgcaaactctgaagcgctataagttcagtttggcgtttgagaattccaacgaggaggattatgttactgagaagtacttccaatctctagttgctggaactatacctgtagttgttggtcctccaaatattgaagatttctctcctggtcgtggttcaattttatacatcaaggagctaagtgatgttgagtcagttgccaagaccatgaaagaacttgcagacaatcctgaagcatttaatcagtcactaagatggaagtatgagggcccatctgattctttcaaggcccttgtggacatggcagcagtacattcatcatgccgtctttgcattcacttggcaactaaaattcgagagaaagaagaaagcagcctagagttcaaaaggcgaccttgtaagtgcaccagaggctcaggagtcgtgtatcacttatatgtgagagaaagagggagatttgagatggaatccattttcataaggtcgggcaatctgactcttgaggcctttgaatctctggtgctcacaaagtttaagtctcagaaacatgtgcccatttggaaacaagaaagacctgaagtcttgagaggaggagacgactttaaaatttatagaatatatcctgttgtaagtagcttcaaaaataggattgtgttgagtccagtcccaaacaggctcgccaaggcccaacagcgaaaccagcccaagccagagagaggagggaaagtgggcttgatccaacaggcccaacccactcccactaccctcatccctacacccagaccagttcgcaccggaaccctagcaagaccaccagagctgttgccgcccttcgttcagtccggtggcctccctagatcaggatccacggcagccatcccgtctgcccaaagctggcctctgtcgacgctacaactgcctgatgcactcacgatccaatcgtctctgttggttacccaaaacagccggcgtcgaaccccaccgctcaatcagcagaggatcggagatcttcaccgccttgcaactggaagcccaaatccacaactagcgccacaaatccagactcgactcaccttgccttcaaaatcgacaccagaagaacccctgctgctgtacacgcccgacgcacaccagacgagatcgacgccggaaaacgtcctctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005996 GO:0006004 GO:0006464 GO:0006486 GO:0006487 GO:0006807 GO:0008150 GO:0008152 GO:0008417 GO:0009056 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0018392 GO:0019317 GO:0019318 GO:0019320 GO:0019538 GO:0031410 GO:0031982 GO:0031984 GO:0034645 GO:0036065 GO:0036211 GO:0042354 GO:0042355 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046365 GO:0046920 GO:0070085 GO:0071704 GO:0097708 GO:0098791 GO:0140096 GO:0140103 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00513 ko01100 map00513 map01100

Pfam Domains

Protein Families

Glyco_transf_10

Protein Analysis

648

Amino Acids

71.8

Weight (kDa)

9.04

Isoelectric Point (pI)

51.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006295)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49710 AT3G19280
fragaria_vesca	FvH4_2g05930 FvH4_2g05930
malus_domestica	MD05G1081600.v1.1 MD10G1094900.v1.1
prunus_persica	Prupe.3G008400_v2.0.a1 Prupe.8G126200_v2.0.a1 Prupe.8G126200_v2.0.a1 Prupe.8G126200_v2.0.a1 Prupe.8G126200_v2.0.a1 Prupe.8G126200_v2.0.a1 Prupe.8G126200_v2.0.a1 Prupe.8G126200_v2.0.a1
pyrus_communis	pycom05g07640 pycom12641g00120
rosa_chinensis	RchiOBHm_Chr6g0257471
rosa_laevigata	RLG00000014701
rosa_multiflora	Rmu_sc0003301.1_g000019
rosa_roxburghii	Rroxscaffold_7G00208800
rosa_rugosa	Rorug05G0571600 Rorug05G0571600
rosa_samantha	Rh6AG089500 Rh6BG081000 Rh6CG077800 Rh6DG073400
rosa_wichuraiana	Rw6G007820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	543
AccB1I	GGYRCC	1 cut(s)	619
AccBSI	CCGCTC	1 cut(s)	1768
AccI	GTMKAC	1 cut(s)	1688
AccII	CGCG	1 cut(s)	218
AciI	CCGC	9 cut(s)	66, 69, 143, 257, 417, 691, 1610, 1766, 1798
AclWI	GGATC	6 cut(s)	474, 1513, 1641, 1654, 1711, 1790
AcoI	YGGCCR	1 cut(s)	174
AcsI	RAATTY	3 cut(s)	826, 1134, 1389
AcuI	CTGAAG	3 cut(s)	815, 1035, 1380
AcyI	GRCGYC	2 cut(s)	1753, 1928
AfaI	GTAC	4 cut(s)	608, 860, 1095, 1898
AfeI	AGCGCT	1 cut(s)	800
AfiI	CCNNNNNNNGG	7 cut(s)	72, 484, 697, 935, 1499, 1643, 1677
AflIII	ACRYGT	1 cut(s)	1330
AgsI	TTSAA	9 cut(s)	707, 716, 917, 942, 1069, 1168, 1295, 1423, 1866
AhdI	GACNNNNNGTC	2 cut(s)	561, 1361
AhlI	ACTAGT	1 cut(s)	560
AjnI	CCWGG	2 cut(s)	252, 928
AloI	GAACNNNNNNTCC	2 cut(s)	370, 402
AluBI	AGCT	9 cut(s)	166, 185, 449, 494, 656, 961, 1419, 1603, 1677
AluI	AGCT	9 cut(s)	166, 185, 449, 494, 656, 961, 1419, 1603, 1677
Alw21I	GWGCWC	3 cut(s)	682, 1190, 1308
Alw26I	GTCTC	5 cut(s)	67, 569, 1326, 1371, 1731
Alw44I	GTGCAC	1 cut(s)	1186
AlwI	GGATC	6 cut(s)	474, 1513, 1641, 1654, 1711, 1790
Ama87I	CYCGRG	1 cut(s)	28
Aor51HI	AGCGCT	1 cut(s)	800
ApaI	GGGCCC	1 cut(s)	1055
ApaLI	GTGCAC	1 cut(s)	1186
ApeKI	GCWGC	8 cut(s)	185, 628, 653, 656, 1088, 1155, 1655, 1891
ApoI	RAATTY	3 cut(s)	826, 1134, 1389
ArsI	GACNNNNNNTTYG	2 cut(s)	1304, 1336
AseI	ATTAAT	1 cut(s)	519
Asp700I	GAANNNNTTC	1 cut(s)	860
AspLEI	GCGC	3 cut(s)	220, 801, 1834
AsuC2I	CCSGG	1 cut(s)	73
AsuHPI	GGTGA	2 cut(s)	1787, 1846
AvaI	CYCGRG	1 cut(s)	28
AvaII	GGWCC	2 cut(s)	102, 902
BaeGI	GKGCMC	3 cut(s)	1055, 1190, 1338
BalI	TGGCCA	1 cut(s)	176
BamHI	GGATCC	1 cut(s)	1646
BanI	GGYRCC	1 cut(s)	619
BanII	GRGCYC	1 cut(s)	1055
Bbv12I	GWGCWC	3 cut(s)	682, 1190, 1308
BbvI	GCAGC	8 cut(s)	172, 640, 643, 665, 1100, 1167, 1667, 1878
BccI	CCATC	8 cut(s)	93, 223, 452, 761, 1032, 1063, 1240, 1667
BceAI	ACGGC	3 cut(s)	299, 1092, 1668
BciT130I	CCWGG	2 cut(s)	254, 930
BcnI	CCSGG	1 cut(s)	73
BcoDI	GTCTC	5 cut(s)	67, 569, 1326, 1371, 1731
BcuI	ACTAGT	1 cut(s)	560
BfaI	CTAG	7 cut(s)	561, 872, 1160, 1586, 1638, 1829, 1945
BfmI	CTRYAG	1 cut(s)	891
BfoI	RGCGCY	2 cut(s)	802, 1835
BglI	GCCNNNNNGGC	2 cut(s)	74, 258
BglII	AGATCT	2 cut(s)	147, 1789
BmcAI	AGTACT	1 cut(s)	860
Bme1390I	CCNGG	3 cut(s)	73, 254, 930
Bme18I	GGWCC	2 cut(s)	102, 902
BmeRI	GACNNNNNGTC	2 cut(s)	561, 1361
BmeT110I	CYCGRG	1 cut(s)	28
BmiI	GGNNCC	5 cut(s)	345, 621, 1053, 1582, 1648
BmrFI	CCNGG	3 cut(s)	73, 254, 930
BmrI	ACTGGG	1 cut(s)	369
BmsI	GCATC	4 cut(s)	301, 386, 421, 1696
BmuI	ACTGGG	1 cut(s)	369
Bpu10I	CCTNAGC	1 cut(s)	1198
BpuEI	CTTGAG	2 cut(s)	1304, 1387
BpuMI	CCSGG	1 cut(s)	73
BsaBI	GATNNNNATC	1 cut(s)	1645
BsaHI	GRCGYC	2 cut(s)	1753, 1928
BsaI	GGTCTC	1 cut(s)	67
BsaJI	CCNNGG	5 cut(s)	72, 315, 483, 1464, 1650
BsaWI	WCCGGW	2 cut(s)	1577, 1625
BsaXI	ACNNNNNCTCC	2 cut(s)	1494, 1524
Bsc4I	CCNNNNNNNGG	7 cut(s)	72, 484, 697, 935, 1499, 1643, 1677
Bse118I	RCCGGY	3 cut(s)	58, 82, 1749
Bse1I	ACTGG	7 cut(s)	364, 380, 400, 468, 1445, 1568, 1813
Bse3DI	GCAATG	2 cut(s)	138, 268
Bse8I	GATNNNNATC	1 cut(s)	1645
BseBI	CCWGG	2 cut(s)	254, 930
BseDI	CCNNGG	5 cut(s)	72, 315, 483, 1464, 1650
BseGI	GGATG	6 cut(s)	316, 370, 401, 580, 1551, 1659
BseJI	GATNNNNATC	1 cut(s)	1645
BseLI	CCNNNNNNNGG	7 cut(s)	72, 484, 697, 935, 1499, 1643, 1677
BseMI	GCAATG	2 cut(s)	138, 268
BseMII	CTCAG	5 cut(s)	272, 630, 843, 1212, 1337
BseNI	ACTGG	7 cut(s)	364, 380, 400, 468, 1445, 1568, 1813
BseRI	GAGGAG	4 cut(s)	851, 1386, 1389, 1515
BseSI	GKGCMC	3 cut(s)	1055, 1190, 1338
BseXI	GCAGC	8 cut(s)	172, 640, 643, 665, 1100, 1167, 1667, 1878
Bsh1236I	CGCG	1 cut(s)	218
Bsh1285I	CGRYCG	1 cut(s)	393
BshNI	GGYRCC	1 cut(s)	619
BsiEI	CGRYCG	1 cut(s)	393
BsiHKAI	GWGCWC	3 cut(s)	682, 1190, 1308
BsiHKCI	CYCGRG	1 cut(s)	28
BsiSI	CCGG	7 cut(s)	59, 72, 83, 1578, 1626, 1750, 1931
BslFI	GGGAC	2 cut(s)	475, 1433
BslI	CCNNNNNNNGG	7 cut(s)	72, 484, 697, 935, 1499, 1643, 1677
BsmAI	GTCTC	5 cut(s)	67, 569, 1326, 1371, 1731
BsmBI	CGTCTC	2 cut(s)	1371, 1731
BsmFI	GGGAC	2 cut(s)	475, 1433
BsmI	GAATGC	1 cut(s)	1116
Bso31I	GGTCTC	1 cut(s)	67
BsoBI	CYCGRG	1 cut(s)	28
Bsp120I	GGGCCC	1 cut(s)	1051
Bsp1286I	GDGCHC	5 cut(s)	682, 1055, 1190, 1308, 1338
Bsp1407I	TGTACA	1 cut(s)	1896
Bsp143I	GATC	9 cut(s)	147, 479, 1518, 1640, 1646, 1716, 1782, 1789, 1922
Bsp19I	CCATGG	1 cut(s)	483
BspACI	CCGC	9 cut(s)	66, 69, 143, 257, 417, 691, 1610, 1766, 1798
BspCNI	CTCAG	5 cut(s)	273, 631, 844, 1211, 1336
BspFNI	CGCG	1 cut(s)	218
BspLI	GGNNCC	5 cut(s)	345, 621, 1053, 1582, 1648
BspPI	GGATC	6 cut(s)	474, 1513, 1641, 1654, 1711, 1790
BspT107I	GGYRCC	1 cut(s)	619
BspTNI	GGTCTC	1 cut(s)	67
BsrBI	CCGCTC	1 cut(s)	1768
BsrDI	GCAATG	2 cut(s)	138, 268
BsrFI	RCCGGY	3 cut(s)	58, 82, 1749
BsrGI	TGTACA	1 cut(s)	1896
BsrI	ACTGG	7 cut(s)	364, 380, 400, 468, 1445, 1568, 1813
BssAI	RCCGGY	3 cut(s)	58, 82, 1749
BssECI	CCNNGG	5 cut(s)	72, 315, 483, 1464, 1650
BssMI	GATC	9 cut(s)	147, 479, 1518, 1640, 1646, 1716, 1782, 1789, 1922
BssNI	GRCGYC	2 cut(s)	1753, 1928
BssT1I	CCWWGG	2 cut(s)	483, 1464
Bst2UI	CCWGG	2 cut(s)	254, 930
Bst4CI	ACNGT	2 cut(s)	674, 764
BstACI	GRCGYC	2 cut(s)	1753, 1928
BstAUI	TGTACA	1 cut(s)	1896
BstC8I	GCNNGC	7 cut(s)	84, 259, 278, 682, 1461, 1679, 1751
BstDEI	CTNAG	8 cut(s)	281, 633, 639, 852, 962, 1034, 1198, 1323
BstDSI	CCRYGG	3 cut(s)	315, 483, 1650
BstEII	GGTNACC	1 cut(s)	1735
BstENI	CCTNNNNNAGG	1 cut(s)	1641
BstF5I	GGATG	6 cut(s)	316, 370, 401, 580, 1551, 1659
BstFNI	CGCG	1 cut(s)	218
BstH2I	RGCGCY	2 cut(s)	802, 1835
BstHHI	GCGC	3 cut(s)	220, 801, 1834
BstKTI	GATC	9 cut(s)	150, 482, 1521, 1643, 1649, 1719, 1785, 1792, 1925
BstMAI	GTCTC	5 cut(s)	67, 569, 1326, 1371, 1731
BstMBI	GATC	9 cut(s)	147, 479, 1518, 1640, 1646, 1716, 1782, 1789, 1922
BstMCI	CGRYCG	1 cut(s)	393
BstNI	CCWGG	2 cut(s)	254, 930
BstNSI	RCATGY	1 cut(s)	1334
BstPI	GGTNACC	1 cut(s)	1735
BstSCI	CCNGG	3 cut(s)	71, 252, 928
BstSFI	CTRYAG	1 cut(s)	891
BstSLI	GKGCMC	3 cut(s)	1055, 1190, 1338
BstUI	CGCG	1 cut(s)	218
BstV1I	GCAGC	8 cut(s)	172, 640, 643, 665, 1100, 1167, 1667, 1878
BstX2I	RGATCY	3 cut(s)	147, 1646, 1789
BstYI	RGATCY	3 cut(s)	147, 1646, 1789
BtgI	CCRYGG	3 cut(s)	315, 483, 1650
BtsCI	GGATG	6 cut(s)	316, 370, 401, 580, 1551, 1659
BtsIMutI	CAGTG	1 cut(s)	475
Cac8I	GCNNGC	7 cut(s)	84, 259, 278, 682, 1461, 1679, 1751
CfoI	GCGC	3 cut(s)	220, 801, 1834
Cfr10I	RCCGGY	3 cut(s)	58, 82, 1749
CseI	GACGC	4 cut(s)	1699, 1742, 1916, 1936
Csp6I	GTAC	4 cut(s)	607, 859, 1094, 1897
CviAII	CATG	6 cut(s)	484, 616, 991, 1084, 1104, 1331
CviQI	GTAC	4 cut(s)	607, 859, 1094, 1897
DdeI	CTNAG	8 cut(s)	281, 633, 639, 852, 962, 1034, 1198, 1323
DpnI	GATC	9 cut(s)	149, 481, 1520, 1642, 1648, 1718, 1784, 1791, 1924
DpnII	GATC	9 cut(s)	147, 479, 1518, 1640, 1646, 1716, 1782, 1789, 1922
DraI	TTTAAA	1 cut(s)	1387
DriI	GACNNNNNGTC	2 cut(s)	561, 1361
EaeI	YGGCCR	1 cut(s)	174
Eam1105I	GACNNNNNGTC	2 cut(s)	561, 1361
EciI	GGCGGA	2 cut(s)	55, 406
Eco130I	CCWWGG	2 cut(s)	483, 1464
Eco147I	AGGCCT	1 cut(s)	1289
Eco24I	GRGCYC	1 cut(s)	1055
Eco31I	GGTCTC	1 cut(s)	67
Eco47I	GGWCC	2 cut(s)	102, 902
Eco47III	AGCGCT	1 cut(s)	800
Eco57I	CTGAAG	3 cut(s)	815, 1035, 1380
Eco88I	CYCGRG	1 cut(s)	28
Eco91I	GGTNACC	1 cut(s)	1735
EcoNI	CCTNNNNNAGG	1 cut(s)	1641
EcoO109I	RGGNCCY	2 cut(s)	1051, 1072
EcoO65I	GGTNACC	1 cut(s)	1735
EcoRI	GAATTC	1 cut(s)	826
EcoRII	CCWGG	2 cut(s)	252, 928
EcoT14I	CCWWGG	2 cut(s)	483, 1464
EcoT38I	GRGCYC	1 cut(s)	1055
ErhI	CCWWGG	2 cut(s)	483, 1464
Esp3I	CGTCTC	2 cut(s)	1371, 1731
FaeI	CATG	6 cut(s)	487, 619, 994, 1087, 1107, 1334
FalI	AAGNNNNNCTT	2 cut(s)	1162, 1194
FaqI	GGGAC	2 cut(s)	475, 1433
FatI	CATG	6 cut(s)	483, 615, 990, 1083, 1103, 1330
FauI	CCCGC	1 cut(s)	250
FblI	GTMKAC	1 cut(s)	1688
FokI	GGATG	6 cut(s)	323, 377, 408, 587, 1538, 1646
FriOI	GRGCYC	1 cut(s)	1055
FspBI	CTAG	7 cut(s)	561, 872, 1160, 1586, 1638, 1829, 1945
GlaI	GCGC	3 cut(s)	219, 800, 1833
HaeII	RGCGCY	2 cut(s)	802, 1835
HapII	CCGG	7 cut(s)	59, 72, 83, 1578, 1626, 1750, 1931
HgaI	GACGC	4 cut(s)	1699, 1742, 1916, 1936
HhaI	GCGC	3 cut(s)	220, 801, 1834
Hin1I	GRCGYC	2 cut(s)	1753, 1928
Hin1II	CATG	6 cut(s)	487, 619, 994, 1087, 1107, 1334
Hin6I	GCGC	3 cut(s)	218, 799, 1832
HinP1I	GCGC	3 cut(s)	218, 799, 1832
HincII	GTYRAC	1 cut(s)	1689
HindII	GTYRAC	1 cut(s)	1689
HindIII	AAGCTT	1 cut(s)	164
HpaII	CCGG	7 cut(s)	59, 72, 83, 1578, 1626, 1750, 1931
HphI	GGTGA	2 cut(s)	1787, 1846
Hpy166II	GTNNAC	5 cut(s)	778, 1081, 1188, 1689, 1899
Hpy188I	TCNGA	9 cut(s)	395, 407, 479, 574, 795, 1060, 1278, 1326, 1787
Hpy8I	GTNNAC	5 cut(s)	778, 1081, 1188, 1689, 1899
Hpy99I	CGWCG	6 cut(s)	43, 125, 1693, 1758, 1910, 1930
HpyAV	CCTTC	6 cut(s)	163, 334, 364, 529, 1624, 1872
HpyCH4III	ACNGT	2 cut(s)	674, 764
HpyCH4IV	ACGT	1 cut(s)	1938
HpyF3I	CTNAG	8 cut(s)	281, 633, 639, 852, 962, 1034, 1198, 1323
HpySE526I	ACGT	1 cut(s)	1938
Hsp92I	GRCGYC	2 cut(s)	1753, 1928
Hsp92II	CATG	6 cut(s)	487, 619, 994, 1087, 1107, 1334
HspAI	GCGC	3 cut(s)	218, 799, 1832
KroI	GCCGGC	2 cut(s)	82, 1749
KroNI	GCCGGC	2 cut(s)	84, 1751
Kzo9I	GATC	9 cut(s)	147, 479, 1518, 1640, 1646, 1716, 1782, 1789, 1922
LmnI	GCTCC	2 cut(s)	343, 958
Lsp1109I	GCAGC	8 cut(s)	172, 640, 643, 665, 1100, 1167, 1667, 1878
LweI	GCATC	4 cut(s)	301, 386, 421, 1696
MaeI	CTAG	7 cut(s)	561, 872, 1160, 1586, 1638, 1829, 1945
MaeII	ACGT	1 cut(s)	1938
MaeIII	GTNAC	4 cut(s)	355, 847, 1029, 1735
MalI	GATC	9 cut(s)	149, 481, 1520, 1642, 1648, 1718, 1784, 1791, 1924
MbiI	CCGCTC	1 cut(s)	1768
MboI	GATC	9 cut(s)	147, 479, 1518, 1640, 1646, 1716, 1782, 1789, 1922
MboII	GAAGA	5 cut(s)	108, 929, 1160, 1784, 1892
MflI	RGATCY	3 cut(s)	147, 1646, 1789
MhlI	GDGCHC	5 cut(s)	682, 1055, 1190, 1308, 1338
MlsI	TGGCCA	1 cut(s)	176
MluCI	AATT	5 cut(s)	412, 826, 942, 1134, 1389
MluNI	TGGCCA	1 cut(s)	176
MlyI	GAGTC	6 cut(s)	983, 1212, 1273, 1450, 1840, 1845
MmeI	TCCRAC	6 cut(s)	279, 373, 565, 693, 855, 1546
Mox20I	TGGCCA	1 cut(s)	176
MreI	CGCCGGCG	1 cut(s)	82
MroNI	GCCGGC	2 cut(s)	82, 1749
MroXI	GAANNNNTTC	1 cut(s)	860
MscI	TGGCCA	1 cut(s)	176
MseI	TTAA	4 cut(s)	519, 1023, 1317, 1386
MslI	CAYNNNNRTG	2 cut(s)	1036, 1218
Msp20I	TGGCCA	1 cut(s)	176
MspA1I	CMGCKG	1 cut(s)	656
MspI	CCGG	7 cut(s)	59, 72, 83, 1578, 1626, 1750, 1931
MspR9I	CCNGG	3 cut(s)	73, 254, 930
Mva1269I	GAATGC	1 cut(s)	1116
MvaI	CCWGG	2 cut(s)	254, 930
MvnI	CGCG	1 cut(s)	218
NaeI	GCCGGC	2 cut(s)	84, 1751
NciI	CCSGG	1 cut(s)	73
NcoI	CCATGG	1 cut(s)	483
NdeII	GATC	9 cut(s)	147, 479, 1518, 1640, 1646, 1716, 1782, 1789, 1922
NgoMIV	GCCGGC	2 cut(s)	82, 1749
NlaIII	CATG	6 cut(s)	487, 619, 994, 1087, 1107, 1334
NlaIV	GGNNCC	5 cut(s)	345, 621, 1053, 1582, 1648
NmeAIII	GCCGAG	2 cut(s)	246, 628
NmuCI	GTSAC	1 cut(s)	1029
NspI	RCATGY	1 cut(s)	1334
PaeR7I	CTCGAG	1 cut(s)	28
PceI	AGGCCT	1 cut(s)	1289
PciI	ACATGT	1 cut(s)	1330
PcsI	WCGNNNNNNNCGW	2 cut(s)	35, 1721
PctI	GAATGC	1 cut(s)	1116
PdiI	GCCGGC	2 cut(s)	84, 1751
PdmI	GAANNNNTTC	1 cut(s)	860
PfeI	GAWTC	6 cut(s)	197, 488, 737, 1061, 1250, 1295
PleI	GAGTC	6 cut(s)	982, 1211, 1273, 1449, 1840, 1845
PpsI	GAGTC	6 cut(s)	982, 1211, 1273, 1449, 1840, 1845
PscI	ACATGT	1 cut(s)	1330
PshBI	ATTAAT	1 cut(s)	519
PsiI	TTATAA	1 cut(s)	543
Psp6I	CCWGG	2 cut(s)	252, 928
PspEI	GGTNACC	1 cut(s)	1735
PspGI	CCWGG	2 cut(s)	252, 928
PspN4I	GGNNCC	5 cut(s)	345, 621, 1053, 1582, 1648
PspOMI	GGGCCC	1 cut(s)	1051
PsuI	RGATCY	3 cut(s)	147, 1646, 1789
PvuII	CAGCTG	1 cut(s)	656
RsaI	GTAC	4 cut(s)	608, 860, 1095, 1898
RsaNI	GTAC	4 cut(s)	607, 859, 1094, 1897
RseI	CAYNNNNRTG	2 cut(s)	1036, 1218
SalI	GTCGAC	1 cut(s)	1687
SaqAI	TTAA	4 cut(s)	519, 1023, 1317, 1386
Sau3AI	GATC	9 cut(s)	147, 479, 1518, 1640, 1646, 1716, 1782, 1789, 1922
ScaI	AGTACT	1 cut(s)	860
SchI	GAGTC	6 cut(s)	983, 1212, 1273, 1450, 1840, 1845
ScrFI	CCNGG	3 cut(s)	73, 254, 930
SduI	GDGCHC	5 cut(s)	682, 1055, 1190, 1308, 1338
SfaNI	GCATC	4 cut(s)	301, 386, 421, 1696
SfcI	CTRYAG	1 cut(s)	891
Sfr274I	CTCGAG	1 cut(s)	28
SgrAI	CRCCGGYG	1 cut(s)	82
SinI	GGWCC	2 cut(s)	102, 902
SlaI	CTCGAG	1 cut(s)	28
SmiMI	CAYNNNNRTG	2 cut(s)	1036, 1218
SmlI	CTYRAG	3 cut(s)	28, 1283, 1366
SmoI	CTYRAG	3 cut(s)	28, 1283, 1366
SpeI	ACTAGT	1 cut(s)	560
Sse9I	AATT	5 cut(s)	412, 826, 942, 1134, 1389
SseBI	AGGCCT	1 cut(s)	1289
SsiI	CCGC	9 cut(s)	66, 69, 143, 257, 417, 691, 1610, 1766, 1798
SspI	AATATT	2 cut(s)	517, 913
SspMI	CTAG	7 cut(s)	561, 872, 1160, 1586, 1638, 1829, 1945
StuI	AGGCCT	1 cut(s)	1289
StyD4I	CCNGG	3 cut(s)	71, 252, 928
StyI	CCWWGG	2 cut(s)	483, 1464
TaaI	ACNGT	2 cut(s)	674, 764
TaiI	ACGT	1 cut(s)	1941
TaqI	TCGA	8 cut(s)	29, 227, 1138, 1688, 1756, 1849, 1871, 1925
TaqII	GACCGA	1 cut(s)	379
TasI	AATT	5 cut(s)	412, 826, 942, 1134, 1389
TatI	WGTACW	3 cut(s)	858, 1093, 1896
TauI	GCSGC	2 cut(s)	71, 1612
TfiI	GAWTC	6 cut(s)	197, 488, 737, 1061, 1250, 1295
Tru1I	TTAA	4 cut(s)	519, 1023, 1317, 1386
Tru9I	TTAA	4 cut(s)	519, 1023, 1317, 1386
TscAI	CASTG	1 cut(s)	475
TseFI	GTSAC	1 cut(s)	1029
TseI	GCWGC	8 cut(s)	185, 628, 653, 656, 1088, 1155, 1655, 1891
Tsp45I	GTSAC	1 cut(s)	1029
TspDTI	ATGAA	3 cut(s)	1007, 1089, 1249
TspGWI	ACGGA	2 cut(s)	221, 547
TspRI	CASTG	1 cut(s)	475
VneI	GTGCAC	1 cut(s)	1186
VpaK11BI	GGWCC	2 cut(s)	102, 902
VspI	ATTAAT	1 cut(s)	519
XagI	CCTNNNNNAGG	1 cut(s)	1641
XapI	RAATTY	3 cut(s)	826, 1134, 1389
XceI	RCATGY	1 cut(s)	1334
XhoI	CTCGAG	1 cut(s)	28
XmiI	GTMKAC	1 cut(s)	1688
XmnI	GAANNNNTTC	1 cut(s)	860
XspI	CTAG	7 cut(s)	561, 872, 1160, 1586, 1638, 1829, 1945
ZrmI	AGTACT	1 cut(s)	860

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.