DNA binding protein binding transcription activator transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G49720 AT1G49720 AT1G49720 AT3G19290 AT3G19290 AT3G19290 AT3G19290 AT3G19290 |
| fragaria_vesca | FvH4_2g05900 FvH4_2g05900 FvH4_2g05900 FvH4_2g05900 FvH4_2g05900 FvH4_2g05900 |
| malus_domestica | MD05G1082000.v1.1 |
| prunus_persica | Prupe.8G126600_v2.0.a1 Prupe.8G126600_v2.0.a1 Prupe.8G126600_v2.0.a1 Prupe.8G126600_v2.0.a1 |
| pyrus_communis | pycom05g07690 |
| rosa_chinensis | RchiOBHm_Chr6g0257641 |
| rosa_laevigata | RLG00000014714 |
| rosa_multiflora | Rmu_sc0006683.1_g000019 Rmu_sc0041937.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00208870 |
| rosa_rugosa | Rorug05G0569700 Rorug05G0569800 Rorug05G0569900 |
| rosa_samantha | Rh6AG086200 Rh6BG080300 Rh6CG075300 Rh6DG072200 |
| rosa_wichuraiana | Rw6G007720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 733 |
| AciI | CCGC | 4 cut(s) | 33, 492, 731, 972 |
| AclI | AACGTT | 1 cut(s) | 98 |
| AcoI | YGGCCR | 1 cut(s) | 1134 |
| AcsI | RAATTY | 2 cut(s) | 346, 1109 |
| AcuI | CTGAAG | 1 cut(s) | 95 |
| AcyI | GRCGYC | 1 cut(s) | 734 |
| AfaI | GTAC | 2 cut(s) | 7, 817 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 611, 925, 1173 |
| AflIII | ACRYGT | 1 cut(s) | 885 |
| AgeI | ACCGGT | 1 cut(s) | 1166 |
| AgsI | TTSAA | 2 cut(s) | 568, 1031 |
| AjnI | CCWGG | 3 cut(s) | 604, 835, 918 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 565, 597 |
| AluBI | AGCT | 5 cut(s) | 109, 827, 1022, 1042, 1102 |
| AluI | AGCT | 5 cut(s) | 109, 827, 1022, 1042, 1102 |
| Alw21I | GWGCWC | 1 cut(s) | 119 |
| Alw26I | GTCTC | 3 cut(s) | 679, 761, 1040 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 688 |
| Ama87I | CYCGRG | 1 cut(s) | 235 |
| AoxI | GGCC | 3 cut(s) | 613, 916, 1134 |
| ApoI | RAATTY | 2 cut(s) | 346, 1109 |
| AsiGI | ACCGGT | 1 cut(s) | 1166 |
| AspLEI | GCGC | 3 cut(s) | 388, 736, 776 |
| AspS9I | GGNCC | 4 cut(s) | 239, 782, 916, 1169 |
| AsuC2I | CCSGG | 4 cut(s) | 132, 236, 237, 258 |
| AsuHPI | GGTGA | 2 cut(s) | 137, 864 |
| AsuII | TTCGAA | 2 cut(s) | 350, 1115 |
| AvaI | CYCGRG | 1 cut(s) | 235 |
| AvaII | GGWCC | 3 cut(s) | 239, 782, 1169 |
| BalI | TGGCCA | 1 cut(s) | 1136 |
| BanI | GGYRCC | 1 cut(s) | 733 |
| BanII | GRGCYC | 1 cut(s) | 991 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 417, 449, 895, 927, 1147, 1179 |
| BbsI | GAAGAC | 2 cut(s) | 72, 323 |
| Bbv12I | GWGCWC | 1 cut(s) | 119 |
| BbvCI | CCTCAGC | 1 cut(s) | 189 |
| BccI | CCATC | 1 cut(s) | 773 |
| BciT130I | CCWGG | 3 cut(s) | 606, 837, 920 |
| BciVI | GTATCC | 1 cut(s) | 187 |
| BclI | TGATCA | 2 cut(s) | 588, 954 |
| BcnI | CCSGG | 4 cut(s) | 132, 236, 237, 258 |
| BcoDI | GTCTC | 3 cut(s) | 679, 761, 1040 |
| BfaI | CTAG | 6 cut(s) | 45, 243, 300, 771, 978, 1043 |
| BfoI | RGCGCY | 1 cut(s) | 737 |
| BfuI | GTATCC | 1 cut(s) | 187 |
| Bme1390I | CCNGG | 7 cut(s) | 132, 236, 237, 258, 606, 837, 920 |
| Bme18I | GGWCC | 3 cut(s) | 239, 782, 1169 |
| BmeT110I | CYCGRG | 1 cut(s) | 235 |
| BmgT120I | GGNCC | 4 cut(s) | 239, 782, 916, 1169 |
| BmiI | GGNNCC | 4 cut(s) | 240, 286, 631, 735 |
| BmrFI | CCNGG | 7 cut(s) | 132, 236, 237, 258, 606, 837, 920 |
| BmsI | GCATC | 1 cut(s) | 373 |
| BpiI | GAAGAC | 2 cut(s) | 72, 323 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 676, 708 |
| BpmI | CTGGAG | 1 cut(s) | 941 |
| Bpu10I | CCTNAGC | 1 cut(s) | 189 |
| Bpu14I | TTCGAA | 2 cut(s) | 350, 1115 |
| BpuEI | CTTGAG | 5 cut(s) | 155, 183, 410, 1022, 1171 |
| BpuMI | CCSGG | 4 cut(s) | 132, 236, 237, 258 |
| BsaAI | YACGTR | 1 cut(s) | 886 |
| BsaHI | GRCGYC | 1 cut(s) | 734 |
| BsaJI | CCNNGG | 6 cut(s) | 131, 234, 235, 836, 1008, 1172 |
| BsaWI | WCCGGW | 1 cut(s) | 1166 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 611, 925, 1173 |
| Bse118I | RCCGGY | 1 cut(s) | 1166 |
| Bse1I | ACTGG | 3 cut(s) | 379, 875, 1020 |
| Bse3DI | GCAATG | 1 cut(s) | 1127 |
| BseBI | CCWGG | 3 cut(s) | 606, 837, 920 |
| BseDI | CCNNGG | 6 cut(s) | 131, 234, 235, 836, 1008, 1172 |
| BseGI | GGATG | 2 cut(s) | 166, 388 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 611, 925, 1173 |
| BseMI | GCAATG | 1 cut(s) | 1127 |
| BseMII | CTCAG | 3 cut(s) | 180, 482, 1014 |
| BseNI | ACTGG | 3 cut(s) | 379, 875, 1020 |
| BseRI | GAGGAG | 1 cut(s) | 819 |
| BsgI | GTGCAG | 1 cut(s) | 870 |
| BshFI | GGCC | 3 cut(s) | 615, 918, 1136 |
| BshNI | GGYRCC | 1 cut(s) | 733 |
| BshTI | ACCGGT | 1 cut(s) | 1166 |
| BsiHKAI | GWGCWC | 1 cut(s) | 119 |
| BsiHKCI | CYCGRG | 1 cut(s) | 235 |
| BsiSI | CCGG | 4 cut(s) | 131, 236, 257, 1167 |
| BslFI | GGGAC | 2 cut(s) | 252, 853 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 611, 925, 1173 |
| BsmAI | GTCTC | 3 cut(s) | 679, 761, 1040 |
| BsmFI | GGGAC | 2 cut(s) | 252, 853 |
| BsnI | GGCC | 3 cut(s) | 615, 918, 1136 |
| BsoBI | CYCGRG | 1 cut(s) | 235 |
| Bsp119I | TTCGAA | 2 cut(s) | 350, 1115 |
| Bsp1286I | GDGCHC | 2 cut(s) | 119, 991 |
| Bsp143I | GATC | 3 cut(s) | 588, 954, 980 |
| BspACI | CCGC | 4 cut(s) | 33, 492, 731, 972 |
| BspANI | GGCC | 3 cut(s) | 615, 918, 1136 |
| BspCNI | CTCAG | 3 cut(s) | 181, 481, 1015 |
| BspHI | TCATGA | 1 cut(s) | 591 |
| BspLI | GGNNCC | 4 cut(s) | 240, 286, 631, 735 |
| BspT104I | TTCGAA | 2 cut(s) | 350, 1115 |
| BspT107I | GGYRCC | 1 cut(s) | 733 |
| BsrDI | GCAATG | 1 cut(s) | 1127 |
| BsrFI | RCCGGY | 1 cut(s) | 1166 |
| BsrI | ACTGG | 3 cut(s) | 379, 875, 1020 |
| BssAI | RCCGGY | 1 cut(s) | 1166 |
| BssECI | CCNNGG | 6 cut(s) | 131, 234, 235, 836, 1008, 1172 |
| BssMI | GATC | 3 cut(s) | 588, 954, 980 |
| BssNI | GRCGYC | 1 cut(s) | 734 |
| BssT1I | CCWWGG | 1 cut(s) | 1008 |
| Bst2UI | CCWGG | 3 cut(s) | 606, 837, 920 |
| Bst4CI | ACNGT | 5 cut(s) | 322, 485, 512, 794, 820 |
| BstACI | GRCGYC | 1 cut(s) | 734 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 667 |
| BstBAI | YACGTR | 1 cut(s) | 886 |
| BstBI | TTCGAA | 2 cut(s) | 350, 1115 |
| BstC8I | GCNNGC | 2 cut(s) | 445, 1134 |
| BstDEI | CTNAG | 5 cut(s) | 28, 189, 308, 468, 1023 |
| BstDSI | CCRYGG | 1 cut(s) | 1172 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 609, 923 |
| BstF5I | GGATG | 2 cut(s) | 166, 388 |
| BstH2I | RGCGCY | 1 cut(s) | 737 |
| BstHHI | GCGC | 3 cut(s) | 388, 736, 776 |
| BstKTI | GATC | 3 cut(s) | 591, 957, 983 |
| BstMAI | GTCTC | 3 cut(s) | 679, 761, 1040 |
| BstMBI | GATC | 3 cut(s) | 588, 954, 980 |
| BstNI | CCWGG | 3 cut(s) | 606, 837, 920 |
| BstSCI | CCNGG | 7 cut(s) | 130, 234, 235, 256, 604, 835, 918 |
| BstV2I | GAAGAC | 2 cut(s) | 72, 323 |
| BsuI | GTATCC | 1 cut(s) | 187 |
| BsuRI | GGCC | 3 cut(s) | 615, 918, 1136 |
| BtgI | CCRYGG | 1 cut(s) | 1172 |
| BtsCI | GGATG | 2 cut(s) | 166, 388 |
| BtsI | GCAGTG | 1 cut(s) | 853 |
| BtsIMutI | CAGTG | 1 cut(s) | 853 |
| Cac8I | GCNNGC | 2 cut(s) | 445, 1134 |
| CaiI | CAGNNNCTG | 1 cut(s) | 688 |
| CciI | TCATGA | 1 cut(s) | 591 |
| CfoI | GCGC | 3 cut(s) | 388, 736, 776 |
| Cfr10I | RCCGGY | 1 cut(s) | 1166 |
| Cfr13I | GGNCC | 4 cut(s) | 239, 782, 916, 1169 |
| Cfr9I | CCCGGG | 1 cut(s) | 235 |
| CpoI | CGGWCCG | 1 cut(s) | 1169 |
| CsiI | ACCWGGT | 1 cut(s) | 604 |
| Csp6I | GTAC | 2 cut(s) | 6, 816 |
| CspAI | ACCGGT | 1 cut(s) | 1166 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 607, 642 |
| CspI | CGGWCCG | 1 cut(s) | 1169 |
| CviAII | CATG | 2 cut(s) | 592, 634 |
| CviQI | GTAC | 2 cut(s) | 6, 816 |
| DdeI | CTNAG | 5 cut(s) | 28, 189, 308, 468, 1023 |
| DinI | GGCGCC | 1 cut(s) | 735 |
| DpnI | GATC | 3 cut(s) | 590, 956, 982 |
| DpnII | GATC | 3 cut(s) | 588, 954, 980 |
| EaeI | YGGCCR | 1 cut(s) | 1134 |
| Eco130I | CCWWGG | 1 cut(s) | 1008 |
| Eco147I | AGGCCT | 1 cut(s) | 615 |
| Eco24I | GRGCYC | 1 cut(s) | 991 |
| Eco32I | GATATC | 1 cut(s) | 19 |
| Eco47I | GGWCC | 3 cut(s) | 239, 782, 1169 |
| Eco57I | CTGAAG | 1 cut(s) | 95 |
| Eco88I | CYCGRG | 1 cut(s) | 235 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 609, 923 |
| EcoO109I | RGGNCCY | 1 cut(s) | 239 |
| EcoRI | GAATTC | 1 cut(s) | 346 |
| EcoRII | CCWGG | 3 cut(s) | 604, 835, 918 |
| EcoRV | GATATC | 1 cut(s) | 19 |
| EcoT14I | CCWWGG | 1 cut(s) | 1008 |
| EcoT38I | GRGCYC | 1 cut(s) | 991 |
| EgeI | GGCGCC | 1 cut(s) | 735 |
| EheI | GGCGCC | 1 cut(s) | 735 |
| ErhI | CCWWGG | 1 cut(s) | 1008 |
| FaeI | CATG | 2 cut(s) | 595, 637 |
| FaqI | GGGAC | 2 cut(s) | 252, 853 |
| FatI | CATG | 2 cut(s) | 591, 633 |
| FauI | CCCGC | 1 cut(s) | 485 |
| FauNDI | CATATG | 1 cut(s) | 179 |
| FbaI | TGATCA | 2 cut(s) | 588, 954 |
| FokI | GGATG | 2 cut(s) | 173, 395 |
| FriOI | GRGCYC | 1 cut(s) | 991 |
| FspBI | CTAG | 6 cut(s) | 45, 243, 300, 771, 978, 1043 |
| GlaI | GCGC | 3 cut(s) | 387, 735, 775 |
| GsuI | CTGGAG | 1 cut(s) | 941 |
| HaeII | RGCGCY | 1 cut(s) | 737 |
| HaeIII | GGCC | 3 cut(s) | 615, 918, 1136 |
| HapII | CCGG | 4 cut(s) | 131, 236, 257, 1167 |
| HhaI | GCGC | 3 cut(s) | 388, 736, 776 |
| Hin1I | GRCGYC | 1 cut(s) | 734 |
| Hin1II | CATG | 2 cut(s) | 595, 637 |
| Hin6I | GCGC | 3 cut(s) | 386, 734, 774 |
| HinP1I | GCGC | 3 cut(s) | 386, 734, 774 |
| HincII | GTYRAC | 1 cut(s) | 751 |
| HindII | GTYRAC | 1 cut(s) | 751 |
| HinfI | GANTC | 7 cut(s) | 56, 418, 547, 595, 961, 968, 1048 |
| HpaII | CCGG | 4 cut(s) | 131, 236, 257, 1167 |
| HphI | GGTGA | 2 cut(s) | 137, 864 |
| Hpy166II | GTNNAC | 2 cut(s) | 272, 751 |
| Hpy188I | TCNGA | 3 cut(s) | 114, 315, 684 |
| Hpy188III | TCNNGA | 8 cut(s) | 45, 172, 334, 422, 592, 958, 965, 1052 |
| Hpy8I | GTNNAC | 2 cut(s) | 272, 751 |
| HpyAV | CCTTC | 3 cut(s) | 350, 919, 933 |
| HpyCH4III | ACNGT | 5 cut(s) | 322, 485, 512, 794, 820 |
| HpyCH4IV | ACGT | 2 cut(s) | 98, 885 |
| HpyCH4V | TGCA | 5 cut(s) | 230, 637, 670, 851, 1060 |
| HpyF3I | CTNAG | 5 cut(s) | 28, 189, 308, 468, 1023 |
| HpySE526I | ACGT | 2 cut(s) | 98, 885 |
| Hsp92I | GRCGYC | 1 cut(s) | 734 |
| Hsp92II | CATG | 2 cut(s) | 595, 637 |
| HspAI | GCGC | 3 cut(s) | 386, 734, 774 |
| KasI | GGCGCC | 1 cut(s) | 733 |
| Ksp22I | TGATCA | 2 cut(s) | 588, 954 |
| Kzo9I | GATC | 3 cut(s) | 588, 954, 980 |
| LmnI | GCTCC | 2 cut(s) | 290, 806 |
| LweI | GCATC | 1 cut(s) | 373 |
| MabI | ACCWGGT | 1 cut(s) | 604 |
| MaeI | CTAG | 6 cut(s) | 45, 243, 300, 771, 978, 1043 |
| MaeII | ACGT | 2 cut(s) | 98, 885 |
| MaeIII | GTNAC | 3 cut(s) | 165, 721, 820 |
| MalI | GATC | 3 cut(s) | 590, 956, 982 |
| MboI | GATC | 3 cut(s) | 588, 954, 980 |
| MboII | GAAGA | 9 cut(s) | 72, 213, 328, 437, 470, 912, 915, 1075, 1167 |
| MhlI | GDGCHC | 2 cut(s) | 119, 991 |
| MlsI | TGGCCA | 1 cut(s) | 1136 |
| MluCI | AATT | 2 cut(s) | 346, 1109 |
| MluNI | TGGCCA | 1 cut(s) | 1136 |
| Mly113I | GGCGCC | 1 cut(s) | 734 |
| MlyI | GAGTC | 2 cut(s) | 65, 412 |
| MmeI | TCCRAC | 1 cut(s) | 719 |
| Mox20I | TGGCCA | 1 cut(s) | 1136 |
| MscI | TGGCCA | 1 cut(s) | 1136 |
| MseI | TTAA | 2 cut(s) | 95, 453 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1095 |
| Msp20I | TGGCCA | 1 cut(s) | 1136 |
| MspA1I | CMGCKG | 1 cut(s) | 974 |
| MspI | CCGG | 4 cut(s) | 131, 236, 257, 1167 |
| MspR9I | CCNGG | 7 cut(s) | 132, 236, 237, 258, 606, 837, 920 |
| MvaI | CCWGG | 3 cut(s) | 606, 837, 920 |
| NarI | GGCGCC | 1 cut(s) | 734 |
| NciI | CCSGG | 4 cut(s) | 132, 236, 237, 258 |
| NdeI | CATATG | 1 cut(s) | 179 |
| NdeII | GATC | 3 cut(s) | 588, 954, 980 |
| NlaIII | CATG | 2 cut(s) | 595, 637 |
| NlaIV | GGNNCC | 4 cut(s) | 240, 286, 631, 735 |
| NspV | TTCGAA | 2 cut(s) | 350, 1115 |
| PagI | TCATGA | 1 cut(s) | 591 |
| PceI | AGGCCT | 1 cut(s) | 615 |
| PfeI | GAWTC | 5 cut(s) | 547, 595, 961, 968, 1048 |
| PfoI | TCCNGGA | 1 cut(s) | 256 |
| PinAI | ACCGGT | 1 cut(s) | 1166 |
| PleI | GAGTC | 2 cut(s) | 64, 412 |
| PluTI | GGCGCC | 1 cut(s) | 737 |
| PpsI | GAGTC | 2 cut(s) | 64, 412 |
| Ppu21I | YACGTR | 1 cut(s) | 886 |
| PpuMI | RGGWCCY | 1 cut(s) | 239 |
| Psp1406I | AACGTT | 1 cut(s) | 98 |
| Psp5II | RGGWCCY | 1 cut(s) | 239 |
| Psp6I | CCWGG | 3 cut(s) | 604, 835, 918 |
| PspGI | CCWGG | 3 cut(s) | 604, 835, 918 |
| PspN4I | GGNNCC | 4 cut(s) | 240, 286, 631, 735 |
| PspPI | GGNCC | 4 cut(s) | 239, 782, 916, 1169 |
| PspPPI | RGGWCCY | 1 cut(s) | 239 |
| PstNI | CAGNNNCTG | 1 cut(s) | 688 |
| RsaI | GTAC | 2 cut(s) | 7, 817 |
| RsaNI | GTAC | 2 cut(s) | 6, 816 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1095 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1169 |
| RsrII | CGGWCCG | 1 cut(s) | 1169 |
| SaqAI | TTAA | 2 cut(s) | 95, 453 |
| Sau3AI | GATC | 3 cut(s) | 588, 954, 980 |
| Sau96I | GGNCC | 4 cut(s) | 239, 782, 916, 1169 |
| SchI | GAGTC | 2 cut(s) | 65, 412 |
| ScrFI | CCNGG | 7 cut(s) | 132, 236, 237, 258, 606, 837, 920 |
| SduI | GDGCHC | 2 cut(s) | 119, 991 |
| SexAI | ACCWGGT | 1 cut(s) | 604 |
| SfaNI | GCATC | 1 cut(s) | 373 |
| SfoI | GGCGCC | 1 cut(s) | 735 |
| SfuI | TTCGAA | 2 cut(s) | 350, 1115 |
| SinI | GGWCC | 3 cut(s) | 239, 782, 1169 |
| SmaI | CCCGGG | 1 cut(s) | 237 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1095 |
| SmlI | CTYRAG | 5 cut(s) | 170, 198, 389, 1037, 1150 |
| SmoI | CTYRAG | 5 cut(s) | 170, 198, 389, 1037, 1150 |
| Sse9I | AATT | 2 cut(s) | 346, 1109 |
| SseBI | AGGCCT | 1 cut(s) | 615 |
| SsiI | CCGC | 4 cut(s) | 33, 492, 731, 972 |
| SspDI | GGCGCC | 1 cut(s) | 733 |
| SspMI | CTAG | 6 cut(s) | 45, 243, 300, 771, 978, 1043 |
| StuI | AGGCCT | 1 cut(s) | 615 |
| StyD4I | CCNGG | 7 cut(s) | 130, 234, 235, 256, 604, 835, 918 |
| StyI | CCWWGG | 1 cut(s) | 1008 |
| TaaI | ACNGT | 5 cut(s) | 322, 485, 512, 794, 820 |
| TaiI | ACGT | 2 cut(s) | 101, 888 |
| TaqI | TCGA | 4 cut(s) | 324, 350, 991, 1115 |
| TasI | AATT | 2 cut(s) | 346, 1109 |
| TauI | GCSGC | 2 cut(s) | 36, 734 |
| TfiI | GAWTC | 5 cut(s) | 547, 595, 961, 968, 1048 |
| Tru1I | TTAA | 2 cut(s) | 95, 453 |
| Tru9I | TTAA | 2 cut(s) | 95, 453 |
| TscAI | CASTG | 1 cut(s) | 853 |
| TspDTI | ATGAA | 4 cut(s) | 167, 342, 608, 1097 |
| TspGWI | ACGGA | 3 cut(s) | 395, 428, 1161 |
| TspMI | CCCGGG | 1 cut(s) | 235 |
| TspRI | CASTG | 1 cut(s) | 853 |
| VpaK11BI | GGWCC | 3 cut(s) | 239, 782, 1169 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 609, 923 |
| XapI | RAATTY | 2 cut(s) | 346, 1109 |
| XbaI | TCTAGA | 1 cut(s) | 44 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 796 |
| XmaI | CCCGGG | 1 cut(s) | 235 |
| XspI | CTAG | 6 cut(s) | 45, 243, 300, 771, 978, 1043 |