FvH4_2g05900
BZIP Family

ABSCISIC ACID-INSENSITIVE 5-like protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
4890065 .. 4894034
3970 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g05900.t4

Sequence Viewer

Length: 1299 bp
ATGGGATCTAATATAAACTTCAAGAACTATGGTGATGTGCAAAATGGGGATGTAAATGGTGGGAAGCTAGGTGGGAATTTCTCACTGGCTCGGCAGACTTCTGTGTACTCCCTGACGTTTGATGAGTTCCAGAACACTATGGGAGGACTTGGGAAGGATTTCGGGTCGATGAACATGGATGAGCTTTTGAAGAATATATGGAGTGCTGAAGAGACTCAAGGAATTACATCTACTTCTGGGGCAGGTGAGGGAAATGCCCCTGTGGGGAATTTGCAGAGACAAGGCTCATTGACTTTGCCGCGGACGCTTAGTCAGAAGACAGTTGATGATGTCTGGAAAGAATTGAATAGGGAGAGTGGTGATGTTAAATTTGGTAATGTTGGTGTGGGTTCGGATTTGCCACAGGAACAAAGACAGCAGACTTTGGGGGAGATGACTTTGGAGGAGTTTTTGGCGAGAGCAGGGGTGGTGCGAGAAGATGCTCAAGAAATGGCAAGGCCCAGTAATAGTGGATTCTTTGGTGAATTGTTTCGCCATAGTAATAACAATACCGGCTTAGCTCCTGGTTTCCAACAGGCAAGTCGAAACAATGGTCTTTTGGGTAGTCGAGTAGAAAGTAACAATAATTCAGTTCCTCATCAGTCCCCTAATTTGGCACTGAATGTTGGTGGAGTGAGAACTTCGCAGCAGCAAACGCACCAGCTTCCCCCGCAGCAGCAACCAATCTTTCCCAAGCCTGCAACTTTGTCTTTTGCCCCTTCTATGCATTTGGTAAGCAATGCTCAGCTAACTAGCCCAAGAAGTAGGGGACCGATGTCTGCCGTTGTGGAACCTTCTAGGAATACTGCTTTCTCTCAAGGTGGTGGGTTTCCGGGTGCAGGGATTGGAATGGGTGGTTTAGGTGCTGGAGGTGTTACAGTTGCATCTAGATCTCCTGTAAATAAGATTTCACCAGATGTGATTGTTAAGAGCAGTGCAGATACATCTTCATTGTCGCCGATTCCTTACATGTTCACTCGTGGAAGGAAAGCCAATGGAGCTTTGGAGAAAGTAGTTGAGAGAAGGCAAAGGAGAATGATAAAGAACAGAGAATCTGCTGCGAGGTCTCGAGCTCGTAAACAGGCCTACACCTTGGAACTAGAGGCAGAAGTGCAAAAACTTAAAGAAATGAATGAAGAGTTGCAGAAAAAACAGGCTGAAATTATGGAAATGCAGAAAGATCAGATTTTGGAGACAATGAATCGGGAATGGGGAGGTAAAAGGCAGTGCTTGAGACGAACATTGACTGGCCCTTGGTAA

Protein Analysis

433

Amino Acids

46.99

Weight (kDa)

9.54

Isoelectric Point (pI)

49.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 233
Acc36I ACCTGC 1 cut(s) 233
AccII CGCG 1 cut(s) 301
AciI CCGC 3 cut(s) 299, 301, 710
AclWI GGATC 1 cut(s) 13
AcsI RAATTY 3 cut(s) 76, 268, 368
AcuI CTGAAG 1 cut(s) 228
AfaI GTAC 1 cut(s) 107
AfiI CCNNNNNNNGG 3 cut(s) 264, 652, 878
AflIII ACRYGT 1 cut(s) 1008
AgsI TTSAA 3 cut(s) 22, 190, 346
AhdI GACNNNNNGTC 1 cut(s) 309
AjnI CCWGG 1 cut(s) 562
AluBI AGCT 7 cut(s) 67, 184, 560, 703, 787, 1040, 1112
AluI AGCT 7 cut(s) 67, 184, 560, 703, 787, 1040, 1112
Alw21I GWGCWC 1 cut(s) 1114
Alw26I GTCTC 5 cut(s) 206, 271, 1110, 1226, 1267
AlwI GGATC 1 cut(s) 13
Ama87I CYCGRG 1 cut(s) 1107
AoxI GGCC 3 cut(s) 497, 1122, 1288
ApeKI GCWGC 5 cut(s) 685, 688, 712, 715, 1097
ApoI RAATTY 3 cut(s) 76, 268, 368
ArsI GACNNNNNNTTYG 2 cut(s) 577, 609
Asp700I GAANNNNTTC 2 cut(s) 158, 528
AspS9I GGNCC 3 cut(s) 498, 809, 1289
AsuC2I CCSGG 1 cut(s) 873
AsuHPI GGTGA 5 cut(s) 44, 257, 371, 533, 942
AvaI CYCGRG 1 cut(s) 1107
AvaII GGWCC 1 cut(s) 809
BanII GRGCYC 1 cut(s) 1114
BauI CACGAG 1 cut(s) 1017
BbsI GAAGAC 1 cut(s) 323
Bbv12I GWGCWC 1 cut(s) 1114
BbvI GCAGC 5 cut(s) 697, 700, 724, 727, 1084
BceAI ACGGC 1 cut(s) 806
BciT130I CCWGG 1 cut(s) 564
BcnI CCSGG 1 cut(s) 873
BcoDI GTCTC 5 cut(s) 206, 271, 1110, 1226, 1267
BfaI CTAG 5 cut(s) 68, 792, 837, 927, 1139
BfuAI ACCTGC 1 cut(s) 233
BglII AGATCT 1 cut(s) 929
BisI GCNGC 6 cut(s) 299, 686, 689, 713, 716, 1098
BlpI GCTNAGC 2 cut(s) 556, 783
BlsI GCNGC 6 cut(s) 300, 687, 690, 714, 717, 1099
Bme1390I CCNGG 2 cut(s) 564, 873
Bme18I GGWCC 1 cut(s) 809
BmeRI GACNNNNNGTC 1 cut(s) 309
BmeT110I CYCGRG 1 cut(s) 1107
BmgT120I GGNCC 3 cut(s) 498, 809, 1289
BmiI GGNNCC 2 cut(s) 810, 831
BmrFI CCNGG 2 cut(s) 564, 873
BmrI ACTGGG 1 cut(s) 495
BmsI GCATC 2 cut(s) 469, 932
BmuI ACTGGG 1 cut(s) 495
BoxI GACNNNNGTC 1 cut(s) 814
BpiI GAAGAC 1 cut(s) 323
BpmI CTGGAG 1 cut(s) 927
Bpu1102I GCTNAGC 2 cut(s) 556, 783
BpuEI CTTGAG 4 cut(s) 201, 468, 840, 1291
BpuMI CCSGG 1 cut(s) 873
BsaI GGTCTC 1 cut(s) 1110
BsaJI CCNNGG 3 cut(s) 299, 1131, 1292
Bsc4I CCNNNNNNNGG 3 cut(s) 264, 652, 878
Bse118I RCCGGY 1 cut(s) 551
Bse1I ACTGG 3 cut(s) 90, 501, 1291
Bse3DI GCAATG 1 cut(s) 784
BseBI CCWGG 1 cut(s) 564
BseDI CCNNGG 3 cut(s) 299, 1131, 1292
BseGI GGATG 2 cut(s) 55, 184
BseLI CCNNNNNNNGG 3 cut(s) 264, 652, 878
BseMI GCAATG 1 cut(s) 784
BseMII CTCAG 1 cut(s) 797
BseNI ACTGG 3 cut(s) 90, 501, 1291
BseRI GAGGAG 1 cut(s) 458
BseXI GCAGC 5 cut(s) 697, 700, 724, 727, 1084
BsgI GTGCAG 2 cut(s) 897, 996
Bsh1236I CGCG 1 cut(s) 301
BshFI GGCC 3 cut(s) 499, 1124, 1290
BsiHKAI GWGCWC 1 cut(s) 1114
BsiHKCI CYCGRG 1 cut(s) 1107
BsiSI CCGG 2 cut(s) 552, 872
BslFI GGGAC 2 cut(s) 628, 822
BslI CCNNNNNNNGG 3 cut(s) 264, 652, 878
BsmAI GTCTC 5 cut(s) 206, 271, 1110, 1226, 1267
BsmBI CGTCTC 1 cut(s) 1267
BsmFI GGGAC 2 cut(s) 628, 822
BsnI GGCC 3 cut(s) 499, 1124, 1290
Bso31I GGTCTC 1 cut(s) 1110
BsoBI CYCGRG 1 cut(s) 1107
Bsp1286I GDGCHC 1 cut(s) 1114
Bsp143I GATC 3 cut(s) 5, 929, 1219
Bsp1720I GCTNAGC 2 cut(s) 556, 783
BspACI CCGC 3 cut(s) 299, 301, 710
BspANI GGCC 3 cut(s) 499, 1124, 1290
BspCNI CTCAG 1 cut(s) 796
BspFNI CGCG 1 cut(s) 301
BspLI GGNNCC 2 cut(s) 810, 831
BspMI ACCTGC 1 cut(s) 233
BspPI GGATC 1 cut(s) 13
BspTNI GGTCTC 1 cut(s) 1110
BsrDI GCAATG 1 cut(s) 784
BsrFI RCCGGY 1 cut(s) 551
BsrI ACTGG 3 cut(s) 90, 501, 1291
BssAI RCCGGY 1 cut(s) 551
BssECI CCNNGG 3 cut(s) 299, 1131, 1292
BssMI GATC 3 cut(s) 5, 929, 1219
BssSI CACGAG 1 cut(s) 1017
BssT1I CCWWGG 2 cut(s) 1131, 1292
Bst2BI CACGAG 1 cut(s) 1017
Bst2UI CCWGG 1 cut(s) 564
Bst4CI ACNGT 2 cut(s) 322, 919
Bst6I CTCTTC 2 cut(s) 204, 1170
BstC8I GCNNGC 1 cut(s) 738
BstDEI CTNAG 3 cut(s) 308, 556, 783
BstDSI CCRYGG 1 cut(s) 299
BstF5I GGATG 2 cut(s) 55, 184
BstFNI CGCG 1 cut(s) 301
BstKTI GATC 3 cut(s) 8, 932, 1222
BstMAI GTCTC 5 cut(s) 206, 271, 1110, 1226, 1267
BstMBI GATC 3 cut(s) 5, 929, 1219
BstMWI GCNNNNNNNGC 4 cut(s) 304, 694, 709, 1037
BstNI CCWGG 1 cut(s) 564
BstNSI RCATGY 1 cut(s) 1012
BstPAI GACNNNNGTC 1 cut(s) 814
BstSCI CCNGG 2 cut(s) 562, 871
BstUI CGCG 1 cut(s) 301
BstV1I GCAGC 5 cut(s) 697, 700, 724, 727, 1084
BstV2I GAAGAC 1 cut(s) 323
BstX2I RGATCY 2 cut(s) 5, 929
BstYI RGATCY 2 cut(s) 5, 929
BsuRI GGCC 3 cut(s) 499, 1124, 1290
BtgI CCRYGG 1 cut(s) 299
BtsCI GGATG 2 cut(s) 55, 184
BtsI GCAGTG 2 cut(s) 979, 1271
BtsIMutI CAGTG 4 cut(s) 83, 656, 979, 1271
BveI ACCTGC 1 cut(s) 233
Cac8I GCNNGC 1 cut(s) 738
Cfr10I RCCGGY 1 cut(s) 551
Cfr13I GGNCC 3 cut(s) 498, 809, 1289
Cfr42I CCGCGG 1 cut(s) 302
CseI GACGC 1 cut(s) 313
Csp6I GTAC 1 cut(s) 106
CviAII CATG 2 cut(s) 175, 1009
CviQI GTAC 1 cut(s) 106
DdeI CTNAG 3 cut(s) 308, 556, 783
DpnI GATC 3 cut(s) 7, 931, 1221
DpnII GATC 3 cut(s) 5, 929, 1219
DriI GACNNNNNGTC 1 cut(s) 309
Eam1104I CTCTTC 2 cut(s) 204, 1170
Eam1105I GACNNNNNGTC 1 cut(s) 309
EarI CTCTTC 2 cut(s) 204, 1170
Ecl136II GAGCTC 1 cut(s) 1112
Eco130I CCWWGG 2 cut(s) 1131, 1292
Eco147I AGGCCT 1 cut(s) 1124
Eco24I GRGCYC 1 cut(s) 1114
Eco31I GGTCTC 1 cut(s) 1110
Eco47I GGWCC 1 cut(s) 809
Eco53kI GAGCTC 1 cut(s) 1112
Eco57I CTGAAG 1 cut(s) 228
Eco88I CYCGRG 1 cut(s) 1107
EcoICRI GAGCTC 1 cut(s) 1112
EcoRII CCWGG 1 cut(s) 562
EcoT14I CCWWGG 2 cut(s) 1131, 1292
EcoT22I ATGCAT 1 cut(s) 768
EcoT38I GRGCYC 1 cut(s) 1114
ErhI CCWWGG 2 cut(s) 1131, 1292
Esp3I CGTCTC 1 cut(s) 1267
FaeI CATG 2 cut(s) 178, 1012
FaqI GGGAC 2 cut(s) 628, 822
FatI CATG 2 cut(s) 174, 1008
FauI CCCGC 1 cut(s) 717
Fnu4HI GCNGC 6 cut(s) 299, 686, 689, 713, 716, 1098
FokI GGATG 2 cut(s) 62, 191
FriOI GRGCYC 1 cut(s) 1114
Fsp4HI GCNGC 6 cut(s) 299, 686, 689, 713, 716, 1098
FspBI CTAG 5 cut(s) 68, 792, 837, 927, 1139
GluI GCNGC 6 cut(s) 299, 686, 689, 713, 716, 1098
GsuI CTGGAG 1 cut(s) 927
HaeIII GGCC 3 cut(s) 499, 1124, 1290
HapII CCGG 2 cut(s) 552, 872
HgaI GACGC 1 cut(s) 313
Hin1II CATG 2 cut(s) 178, 1012
HinfI GANTC 5 cut(s) 214, 513, 1000, 1091, 1240
HpaII CCGG 2 cut(s) 552, 872
HphI GGTGA 5 cut(s) 44, 257, 371, 533, 942
Hpy166II GTNNAC 3 cut(s) 106, 1014, 1118
Hpy188I TCNGA 3 cut(s) 315, 394, 1224
Hpy188III TCNNGA 7 cut(s) 22, 130, 334, 485, 927, 1107, 1244
Hpy8I GTNNAC 3 cut(s) 106, 1014, 1118
HpyAV CCTTC 5 cut(s) 148, 768, 843, 1017, 1056
HpyCH4III ACNGT 2 cut(s) 322, 919
HpyCH4IV ACGT 1 cut(s) 116
HpyF10VI GCNNNNNNNGC 4 cut(s) 304, 694, 709, 1037
HpyF3I CTNAG 3 cut(s) 308, 556, 783
HpySE526I ACGT 1 cut(s) 116
Hsp92II CATG 2 cut(s) 178, 1012
KspI CCGCGG 1 cut(s) 302
Kzo9I GATC 3 cut(s) 5, 929, 1219
LmnI GCTCC 2 cut(s) 565, 1037
Lsp1109I GCAGC 5 cut(s) 697, 700, 724, 727, 1084
LweI GCATC 2 cut(s) 469, 932
MaeI CTAG 5 cut(s) 68, 792, 837, 927, 1139
MaeII ACGT 1 cut(s) 116
MaeIII GTNAC 2 cut(s) 617, 913
MalI GATC 3 cut(s) 7, 931, 1221
MboI GATC 3 cut(s) 5, 929, 1219
MboII GAAGA 6 cut(s) 202, 221, 328, 488, 978, 1187
MflI RGATCY 2 cut(s) 5, 929
MhlI GDGCHC 1 cut(s) 1114
MluCI AATT 9 cut(s) 76, 222, 268, 341, 368, 524, 625, 649, 1200
MlyI GAGTC 1 cut(s) 208
MmeI TCCRAC 1 cut(s) 595
MnlI CCTC 8 cut(s) 137, 241, 436, 645, 902, 1095, 1135, 1247
Mph1103I ATGCAT 1 cut(s) 768
MroXI GAANNNNTTC 2 cut(s) 158, 528
MseI TTAA 3 cut(s) 366, 966, 1161
MspA1I CMGCKG 1 cut(s) 301
MspI CCGG 2 cut(s) 552, 872
MspR9I CCNGG 2 cut(s) 564, 873
MvaI CCWGG 1 cut(s) 564
MvnI CGCG 1 cut(s) 301
MwoI GCNNNNNNNGC 4 cut(s) 304, 694, 709, 1037
NciI CCSGG 1 cut(s) 873
NdeII GATC 3 cut(s) 5, 929, 1219
NlaIII CATG 2 cut(s) 178, 1012
NlaIV GGNNCC 2 cut(s) 810, 831
NmeAIII GCCGAG 1 cut(s) 70
NsiI ATGCAT 1 cut(s) 768
NspI RCATGY 1 cut(s) 1012
PaeR7I CTCGAG 1 cut(s) 1107
PaqCI CACCTGC 1 cut(s) 233
PceI AGGCCT 1 cut(s) 1124
PciI ACATGT 1 cut(s) 1008
PdmI GAANNNNTTC 2 cut(s) 158, 528
PfeI GAWTC 4 cut(s) 513, 1000, 1091, 1240
PkrI GCNGC 6 cut(s) 300, 687, 690, 714, 717, 1099
PleI GAGTC 1 cut(s) 208
PpsI GAGTC 1 cut(s) 208
PscI ACATGT 1 cut(s) 1008
PshAI GACNNNNGTC 1 cut(s) 814
Psp124BI GAGCTC 1 cut(s) 1114
Psp6I CCWGG 1 cut(s) 562
PspGI CCWGG 1 cut(s) 562
PspN4I GGNNCC 2 cut(s) 810, 831
PspPI GGNCC 3 cut(s) 498, 809, 1289
PsuI RGATCY 2 cut(s) 5, 929
RsaI GTAC 1 cut(s) 107
RsaNI GTAC 1 cut(s) 106
SacI GAGCTC 1 cut(s) 1114
SacII CCGCGG 1 cut(s) 302
SaqAI TTAA 3 cut(s) 366, 966, 1161
SatI GCNGC 6 cut(s) 299, 686, 689, 713, 716, 1098
Sau3AI GATC 3 cut(s) 5, 929, 1219
Sau96I GGNCC 3 cut(s) 498, 809, 1289
SchI GAGTC 1 cut(s) 208
ScrFI CCNGG 2 cut(s) 564, 873
SduI GDGCHC 1 cut(s) 1114
SfaNI GCATC 2 cut(s) 469, 932
Sfr274I CTCGAG 1 cut(s) 1107
Sfr303I CCGCGG 1 cut(s) 302
SgrBI CCGCGG 1 cut(s) 302
SinI GGWCC 1 cut(s) 809
SlaI CTCGAG 1 cut(s) 1107
SmlI CTYRAG 5 cut(s) 216, 483, 855, 1107, 1270
SmoI CTYRAG 5 cut(s) 216, 483, 855, 1107, 1270
Sse9I AATT 9 cut(s) 76, 222, 268, 341, 368, 524, 625, 649, 1200
SseBI AGGCCT 1 cut(s) 1124
SsiI CCGC 3 cut(s) 299, 301, 710
SspMI CTAG 5 cut(s) 68, 792, 837, 927, 1139
SstI GAGCTC 1 cut(s) 1114
StuI AGGCCT 1 cut(s) 1124
StyD4I CCNGG 2 cut(s) 562, 871
StyI CCWWGG 2 cut(s) 1131, 1292
TaaI ACNGT 2 cut(s) 322, 919
TaiI ACGT 1 cut(s) 119
TaqI TCGA 4 cut(s) 167, 583, 607, 1108
TaqII GACCGA 1 cut(s) 826
TasI AATT 9 cut(s) 76, 222, 268, 341, 368, 524, 625, 649, 1200
TatI WGTACW 1 cut(s) 105
TauI GCSGC 1 cut(s) 301
TfiI GAWTC 4 cut(s) 513, 1000, 1091, 1240
Tru1I TTAA 3 cut(s) 366, 966, 1161
Tru9I TTAA 3 cut(s) 366, 966, 1161
TscAI CASTG 4 cut(s) 90, 663, 979, 1271
TseI GCWGC 5 cut(s) 685, 688, 712, 715, 1097
TspDTI ATGAA 5 cut(s) 185, 978, 1184, 1188, 1253
TspRI CASTG 4 cut(s) 90, 663, 979, 1271
VpaK11BI GGWCC 1 cut(s) 809
XapI RAATTY 3 cut(s) 76, 268, 368
XbaI TCTAGA 1 cut(s) 926
XceI RCATGY 1 cut(s) 1012
XcmI CCANNNNNNNNNTGG 1 cut(s) 1039
XhoI CTCGAG 1 cut(s) 1107
XmnI GAANNNNTTC 2 cut(s) 158, 528
XspI CTAG 5 cut(s) 68, 792, 837, 927, 1139
Zsp2I ATGCAT 1 cut(s) 768
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.