Rmu_sc0041937.1_g000001
BZIP Family

ABSCISIC ACID-INSENSITIVE 5-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0041937.1
Physical Location & Seq
Forward (+)
18 .. 605
588 bp
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UTR
Exon/CDS
Intron
Rmu_sc0041937.1_g000001.1.cds

Sequence Viewer

Length: 267 bp
atgggaagttttaaggatccagtttgttacaaggcttacacaatggagttggaagcagaagttgcaaagctaaaagaggagaacgaaaacttgaagaaaaaacaggatgaaatgatggaactgcagaagaatcaggtactttggtttttctgttttctttttctagttgggaaatggggggtggggagggtcaggggcgtaactacgtatgaggctagttgggctatagcccaacccataattctttcaatatttgatcgattataa

Protein Analysis

88

Amino Acids

10.3

Weight (kDa)

6.26

Isoelectric Point (pI)

15.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 265
AclWI GGATC 2 cut(s) 11, 24
AfaI GTAC 1 cut(s) 138
AgsI TTSAA 2 cut(s) 94, 249
AjuI GAANNNNNNNTTGG 2 cut(s) 225, 257
AluBI AGCT 1 cut(s) 70
AluI AGCT 1 cut(s) 70
AlwI GGATC 2 cut(s) 11, 24
BaeI ACNNNNGTAYC 2 cut(s) 128, 161
BamHI GGATCC 1 cut(s) 16
BccI CCATC 1 cut(s) 109
BfaI CTAG 2 cut(s) 164, 216
BfmI CTRYAG 2 cut(s) 122, 225
BmiI GGNNCC 1 cut(s) 18
Bsa29I ATCGAT 1 cut(s) 259
BsaAI YACGTR 1 cut(s) 207
Bse1I ACTGG 1 cut(s) 20
BseCI ATCGAT 1 cut(s) 259
BseGI GGATG 1 cut(s) 112
BseNI ACTGG 1 cut(s) 20
BseRI GAGGAG 1 cut(s) 92
BshVI ATCGAT 1 cut(s) 259
Bsp143I GATC 2 cut(s) 16, 256
BspDI ATCGAT 1 cut(s) 259
BspLI GGNNCC 1 cut(s) 18
BspMAI CTGCAG 1 cut(s) 126
BspPI GGATC 2 cut(s) 11, 24
BsrI ACTGG 1 cut(s) 20
BssMI GATC 2 cut(s) 16, 256
BstAPI GCANNNNNTGC 1 cut(s) 62
BstBAI YACGTR 1 cut(s) 207
BstF5I GGATG 1 cut(s) 112
BstKTI GATC 2 cut(s) 19, 259
BstMBI GATC 2 cut(s) 16, 256
BstMWI GCNNNNNNNGC 2 cut(s) 62, 221
BstSFI CTRYAG 2 cut(s) 122, 225
BstSNI TACGTA 1 cut(s) 207
BstX2I RGATCY 1 cut(s) 16
BstYI RGATCY 1 cut(s) 16
Bsu15I ATCGAT 1 cut(s) 259
BsuTUI ATCGAT 1 cut(s) 259
BtsCI GGATG 1 cut(s) 112
ClaI ATCGAT 1 cut(s) 259
Csp6I GTAC 1 cut(s) 137
CviJI RGCY 5 cut(s) 35, 70, 215, 224, 230
CviKI_1 RGCY 5 cut(s) 35, 70, 215, 224, 230
CviQI GTAC 1 cut(s) 137
DpnI GATC 2 cut(s) 18, 258
DpnII GATC 2 cut(s) 16, 256
Eco105I TACGTA 1 cut(s) 207
FaiI YATR 4 cut(s) 210, 227, 239, 265
FokI GGATG 1 cut(s) 119
FspBI CTAG 2 cut(s) 164, 216
HinfI GANTC 1 cut(s) 130
HpyCH4IV ACGT 1 cut(s) 206
HpyCH4V TGCA 2 cut(s) 65, 124
HpyF10VI GCNNNNNNNGC 2 cut(s) 62, 221
HpySE526I ACGT 1 cut(s) 206
Kzo9I GATC 2 cut(s) 16, 256
LpnPI CCDG 4 cut(s) 33, 89, 119, 178
MaeI CTAG 2 cut(s) 164, 216
MaeII ACGT 1 cut(s) 206
MaeIII GTNAC 2 cut(s) 26, 199
MalI GATC 2 cut(s) 18, 258
MboI GATC 2 cut(s) 16, 256
MboII GAAGA 2 cut(s) 106, 139
MflI RGATCY 1 cut(s) 16
MluCI AATT 1 cut(s) 240
MmeI TCCRAC 1 cut(s) 30
MnlI CCTC 3 cut(s) 70, 180, 205
MseI TTAA 1 cut(s) 12
MwoI GCNNNNNNNGC 2 cut(s) 62, 221
NdeII GATC 2 cut(s) 16, 256
NlaIV GGNNCC 1 cut(s) 18
PfeI GAWTC 1 cut(s) 130
Ppu21I YACGTR 1 cut(s) 207
PsiI TTATAA 1 cut(s) 265
PspN4I GGNNCC 1 cut(s) 18
PstI CTGCAG 1 cut(s) 126
PsuI RGATCY 1 cut(s) 16
RsaI GTAC 1 cut(s) 138
RsaNI GTAC 1 cut(s) 137
SaqAI TTAA 1 cut(s) 12
Sau3AI GATC 2 cut(s) 16, 256
SetI ASST 3 cut(s) 72, 138, 209
SfcI CTRYAG 2 cut(s) 122, 225
SgeI CNNG 8 cut(s) 32, 43, 103, 116, 146, 176, 205, 228
SnaBI TACGTA 1 cut(s) 207
Sse9I AATT 1 cut(s) 240
SspI AATATT 1 cut(s) 252
SspMI CTAG 2 cut(s) 164, 216
TaiI ACGT 1 cut(s) 209
TaqI TCGA 1 cut(s) 259
TasI AATT 1 cut(s) 240
TfiI GAWTC 1 cut(s) 130
Tru1I TTAA 1 cut(s) 12
Tru9I TTAA 1 cut(s) 12
TspDTI ATGAA 1 cut(s) 123
XspI CTAG 2 cut(s) 164, 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.