Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013551

Physical Location & Seq

Genomic Coordinates Forward (+)

20201806 .. 20204412

Gene Structure 2607 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G54115.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGAGAGCTGTGAATTTTATGTATAGCTCGAATAATCCCAAATTTCGAGGGATTTTCAATGGGCTTTGCGCTATAATCCTATTCATCTTCTTCTTTGATCAGAGCGATATTTACAGGAACCCTTTGTTGAAGAATCTTTCTTTCGTTGATTCTAGTGGTAAATTCAATCGTGGGTTTAGCCAGTTTACTGTACCTCGTCGACATTTGAGTGAAGTTGACACTAATGGCTCTTCTGGTAATAGCAGCTTGAGTGGTGATAGTACTGTATCCTGCTCTGGGTTACATGAACATAGAGGTTATGCTGATCAATGCGAATTCTTGAAATCGAATCCAATTTGTTCTCCAGATGGCTTCTTTGATTACCTCAAGTTCTTTTACTGCTCCTGCAGAGATTTTAAGATCTTGGGTTATATACTGTTAGGTGTTTGGCTTGTTGCTTTGTTTTATCTGTTGGGTAATACTGCTGCTGATTACTTTTGTTGTTCGTTGGAGAAGCTTTCTAAGCTTTTGAGGTTGCCTCCAACTGTTGCTGGTGTTACTTTGCTTCCACTTGGTAACGGAGCTCCTGATGTGTTTGCGAGTATAGCTGCTTTTGTTGGTTCAGATAAAGGGGAAGTGGGTCTCAACAGCGTCTTGGGTGGTGCAGTGTTTGTGACTTGTGTTGTTGTTGGGATTGTTTCACTTTGTGTTGCGGATAAAGAAGTTAAGATTGATAAGAAATGTTTCATCAGAGACTTGAGTTTCTTCCTTTTCACATTGGTGGCTTTGATGGTGATTTTGATGGTTGGTAAGGTGACTGTGGGTATTGCCATTGCGTTTGTCTCGATCTATGTGTTTTATGCTTCTCTCGTGGCTGCGAATGAGATTTTGAGGAAACATTCCAGGAGGTTGAAGCTGGATTCTATTACGCCTTTGCTCCCAATGCAAGGAAGTGTGTTCTCCTCCCCAAGTGTTGAAGAGGATATTCCTATGTACAGCCCGTTGATGGAGCTTGACACCGGTGAAGGTCCACCTCGGCTACATGATTCTCTACCACAGTGGATGTGGGCTACAAATGTAGCCATCTATTCAAACCATTTCGCAAAAGCCAATGTTCATGATGAAGAAAGACCTCCATGGGGGTGGACCGAAGATGGTGCAGAAGTCGAGAGCTCGTTATGTTCTAAAATCACATCTTTGCTGGAAACTCCACTGACTGTTCCTAGACGGTTGACAATCCCATTGATTGAGGAAGATAGCTGGTCAAAGACGTATGCGGTGGCTAGTGTCTCGCTGGCGCCTGTCCTACTTTCCTTTCTTTGGAGCAGCCAAGATGATACGAGTCTTCAAGCTCGCATTGTAGCCTATTTTATCGGAATTGCGATTGGATCTACTCTTGGATATCTCGCGTTCAAAAACACAGAGCCCGACCGTCCACCTCAAATATATTTAATCCCTTGGGTACTTGGTGGATTCATCATGAGCATCGTATGGTTCTACATGATTGCAAACGAACTTGTTGCACTTTTGGTTACATTTGGTGGAATCTATGGAATCAACCCGTCAATACTCGGTCTAACCGTACTTGCTTGGGGAAACTCAATGGGTGACTTAGTGTCAAACATCGCATTGTCAATGAACGGTGGAGATGGGGTACAAATCGCGTTGTCTGGTTGCTACGCAGGTCCAATGTTTAACACGCTTGTTGGGTTAGGTATGTCGATGTTTCTTGGTGCTTGGTCGAAAAGTCCAGAGACTTACATGATCCCGGAGGACAATAGCTTGTTCTACACTCTAGGGTTTCTAATATTCGGATTGATTTGGTCTCTTGTGATGCTCCCACGCAACGAAATGCGACCGAACAAAGTGATGGGCATTGGTCTTATTACACTGTATCTGATATTCGTCACTTTCAGGCTTAGCTCCGCCATGGGATTCATACCTTGGGCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005384 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006828 GO:0006873 GO:0006950 GO:0006970 GO:0008150 GO:0008324 GO:0009628 GO:0009651 GO:0009987 GO:0012505 GO:0012506 GO:0015075 GO:0015077 GO:0015079 GO:0015081 GO:0015318 GO:0015672 GO:0016020 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030659 GO:0031090 GO:0031410 GO:0031982 GO:0034220 GO:0035725 GO:0042592 GO:0043157 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071421 GO:0071804 GO:0071805 GO:0097708 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_Ca_ex

Protein Analysis

644

Amino Acids

70.8

Weight (kDa)

5.52

Isoelectric Point (pI)

32.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_Ca_ex	PF01699	141 - 283	3e-27	Sodium/calcium exchanger protein
Na_Ca_ex	PF01699	481 - 633	1.9e-29	Sodium/calcium exchanger protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013551)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54115 AT3G14070
fragaria_vesca	FvH4_1g08880
malus_domestica	MD02G1094200.v1.1 MD15G1219100.v1.1
prunus_persica	Prupe.7G196800_v2.0.a1
pyrus_communis	pycom02g07420 pycom15g19420
rosa_chinensis	RchiOBHm_Chr2g0095341
rosa_laevigata	RLG00000016556
rosa_multiflora	Rmu_ssc0000183.1_g000034
rosa_roxburghii	Rroxscaffold_2G00146460
rosa_rugosa	Rorug02G0049800
rosa_samantha	Rh2AG097900 Rh2BG099100 Rh2CG101200 Rh2DG098800
rosa_wichuraiana	Rw2G007390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1652
AccB1I	GGYRCC	1 cut(s)	1276
AccI	GTMKAC	1 cut(s)	199
AccII	CGCG	2 cut(s)	1388, 1643
AciI	CCGC	3 cut(s)	692, 1256, 1905
AclWI	GGATC	2 cut(s)	1375, 1738
AcsI	RAATTY	4 cut(s)	13, 41, 161, 314
AcyI	GRCGYC	1 cut(s)	1277
AdeI	CACNNNGTG	1 cut(s)	686
AfaI	GTAC	6 cut(s)	192, 262, 974, 1443, 1563, 1635
AfiI	CCNNNNNNNGG	5 cut(s)	276, 926, 985, 1118, 1299
AgeI	ACCGGT	1 cut(s)	998
AgsI	TTSAA	9 cut(s)	58, 130, 166, 322, 892, 956, 1071, 1328, 1393
AhdI	GACNNNNNGTC	1 cut(s)	1594
AjnI	CCWGG	1 cut(s)	881
AleI	CACNNNNGTG	1 cut(s)	758
Alw21I	GWGCWC	2 cut(s)	565, 1154
Alw26I	GTCTC	6 cut(s)	626, 726, 826, 1273, 1727, 1809
AlwI	GGATC	2 cut(s)	1375, 1738
ApeKI	GCWGC	5 cut(s)	243, 464, 587, 854, 1305
ApoI	RAATTY	4 cut(s)	13, 41, 161, 314
AsiGI	ACCGGT	1 cut(s)	998
Asp700I	GAANNNNTTC	1 cut(s)	722
AspLEI	GCGC	2 cut(s)	71, 1279
AspS9I	GGNCC	3 cut(s)	1007, 1125, 1664
AsuC2I	CCSGG	1 cut(s)	1748
AsuHPI	GGTGA	5 cut(s)	266, 784, 805, 1013, 1598
AvaII	GGWCC	3 cut(s)	1007, 1125, 1664
BanI	GGYRCC	1 cut(s)	1276
BanII	GRGCYC	3 cut(s)	565, 1154, 1407
BauI	CACGAG	1 cut(s)	848
BbsI	GAAGAC	1 cut(s)	1316
Bbv12I	GWGCWC	2 cut(s)	565, 1154
BbvI	GCAGC	5 cut(s)	255, 451, 574, 841, 1317
BccI	CCATC	8 cut(s)	341, 763, 775, 979, 1070, 1127, 1622, 1843
BcgI	CGANNNNNNTGC	4 cut(s)	1118, 1152, 1481, 1515
BciT130I	CCWGG	1 cut(s)	883
BciVI	GTATCC	1 cut(s)	277
BclI	TGATCA	2 cut(s)	97, 304
BcnI	CCSGG	1 cut(s)	1748
BcoDI	GTCTC	6 cut(s)	626, 726, 826, 1273, 1727, 1809
BfaI	CTAG	4 cut(s)	153, 1203, 1263, 1775
BfmI	CTRYAG	1 cut(s)	385
BfoI	RGCGCY	1 cut(s)	1280
BfuAI	ACCTGC	1 cut(s)	1652
BfuI	GTATCC	1 cut(s)	277
BglII	AGATCT	1 cut(s)	399
BisI	GCNGC	5 cut(s)	244, 465, 588, 855, 1306
BlpI	GCTNAGC	1 cut(s)	1898
BlsI	GCNGC	5 cut(s)	245, 466, 589, 856, 1307
BmcAI	AGTACT	1 cut(s)	262
Bme1390I	CCNGG	2 cut(s)	883, 1748
Bme18I	GGWCC	3 cut(s)	1007, 1125, 1664
BmeRI	GACNNNNNGTC	1 cut(s)	1594
BmgT120I	GGNCC	3 cut(s)	1007, 1125, 1664
BmiI	GGNNCC	2 cut(s)	119, 1278
BmrFI	CCNGG	2 cut(s)	883, 1748
BmsI	GCATC	2 cut(s)	1473, 1803
BpiI	GAAGAC	1 cut(s)	1316
BplI	GAGNNNNNCTC	2 cut(s)	502, 534
BpmI	CTGGAG	1 cut(s)	327
Bpu1102I	GCTNAGC	1 cut(s)	1898
BpuEI	CTTGAG	3 cut(s)	268, 350, 757
BpuMI	CCSGG	1 cut(s)	1748
BsaHI	GRCGYC	1 cut(s)	1277
BsaI	GGTCTC	2 cut(s)	626, 1809
BsaJI	CCNNGG	5 cut(s)	1013, 1115, 1436, 1908, 1922
BsaWI	WCCGGW	1 cut(s)	998
BsaXI	ACNNNNNCTCC	2 cut(s)	1617, 1647
Bsc4I	CCNNNNNNNGG	5 cut(s)	276, 926, 985, 1118, 1299
Bse118I	RCCGGY	1 cut(s)	998
Bse1I	ACTGG	1 cut(s)	181
Bse3DI	GCAATG	1 cut(s)	810
BseBI	CCWGG	1 cut(s)	883
BseDI	CCNNGG	5 cut(s)	1013, 1115, 1436, 1908, 1922
BseGI	GGATG	1 cut(s)	1047
BseLI	CCNNNNNNNGG	5 cut(s)	276, 926, 985, 1118, 1299
BseMI	GCAATG	1 cut(s)	810
BseNI	ACTGG	1 cut(s)	181
BseRI	GAGGAG	1 cut(s)	931
BseXI	GCAGC	5 cut(s)	255, 451, 574, 841, 1317
BsgI	GTGCAG	2 cut(s)	663, 1158
Bsh1236I	CGCG	2 cut(s)	1388, 1643
Bsh1285I	CGRYCG	2 cut(s)	1411, 1838
BshNI	GGYRCC	1 cut(s)	1276
BshTI	ACCGGT	1 cut(s)	998
BsiEI	CGRYCG	2 cut(s)	1411, 1838
BsiHKAI	GWGCWC	2 cut(s)	565, 1154
BsiSI	CCGG	2 cut(s)	999, 1748
BslI	CCNNNNNNNGG	5 cut(s)	276, 926, 985, 1118, 1299
BsmAI	GTCTC	6 cut(s)	626, 726, 826, 1273, 1727, 1809
Bso31I	GGTCTC	2 cut(s)	626, 1809
Bsp1286I	GDGCHC	3 cut(s)	565, 1154, 1407
Bsp1407I	TGTACA	1 cut(s)	972
Bsp143I	GATC	6 cut(s)	97, 304, 399, 825, 1367, 1743
Bsp1720I	GCTNAGC	1 cut(s)	1898
Bsp19I	CCATGG	2 cut(s)	1115, 1908
BspACI	CCGC	3 cut(s)	692, 1256, 1905
BspFNI	CGCG	2 cut(s)	1388, 1643
BspHI	TCATGA	2 cut(s)	1096, 1458
BspLI	GGNNCC	2 cut(s)	119, 1278
BspMAI	CTGCAG	1 cut(s)	389
BspMI	ACCTGC	1 cut(s)	1652
BspPI	GGATC	2 cut(s)	1375, 1738
BspQI	GCTCTTC	1 cut(s)	235
BspT107I	GGYRCC	1 cut(s)	1276
BspTNI	GGTCTC	2 cut(s)	626, 1809
BsrDI	GCAATG	1 cut(s)	810
BsrFI	RCCGGY	1 cut(s)	998
BsrGI	TGTACA	1 cut(s)	972
BsrI	ACTGG	1 cut(s)	181
BssAI	RCCGGY	1 cut(s)	998
BssECI	CCNNGG	5 cut(s)	1013, 1115, 1436, 1908, 1922
BssMI	GATC	6 cut(s)	97, 304, 399, 825, 1367, 1743
BssNI	GRCGYC	1 cut(s)	1277
BssSI	CACGAG	1 cut(s)	848
BssT1I	CCWWGG	4 cut(s)	1115, 1436, 1908, 1922
Bst2BI	CACGAG	1 cut(s)	848
Bst2UI	CCWGG	1 cut(s)	883
Bst6I	CTCTTC	2 cut(s)	235, 951
BstACI	GRCGYC	1 cut(s)	1277
BstAUI	TGTACA	1 cut(s)	972
BstC8I	GCNNGC	2 cut(s)	1275, 1333
BstDEI	CTNAG	3 cut(s)	501, 1591, 1898
BstDSI	CCRYGG	2 cut(s)	1115, 1908
BstF5I	GGATG	1 cut(s)	1047
BstFNI	CGCG	2 cut(s)	1388, 1643
BstH2I	RGCGCY	1 cut(s)	1280
BstHHI	GCGC	2 cut(s)	71, 1279
BstKTI	GATC	6 cut(s)	100, 307, 402, 828, 1370, 1746
BstMAI	GTCTC	6 cut(s)	626, 726, 826, 1273, 1727, 1809
BstMBI	GATC	6 cut(s)	97, 304, 399, 825, 1367, 1743
BstMCI	CGRYCG	2 cut(s)	1411, 1838
BstMWI	GCNNNNNNNGC	3 cut(s)	502, 584, 922
BstNI	CCWGG	1 cut(s)	883
BstSCI	CCNGG	2 cut(s)	881, 1746
BstSFI	CTRYAG	1 cut(s)	385
BstUI	CGCG	2 cut(s)	1388, 1643
BstV1I	GCAGC	5 cut(s)	255, 451, 574, 841, 1317
BstV2I	GAAGAC	1 cut(s)	1316
BstX2I	RGATCY	2 cut(s)	399, 1367
BstXI	CCANNNNNNTGG	1 cut(s)	1122
BstYI	RGATCY	2 cut(s)	399, 1367
BsuI	GTATCC	1 cut(s)	277
BtgI	CCRYGG	2 cut(s)	1115, 1908
BtgZI	GCGATG	1 cut(s)	1588
BtsCI	GGATG	1 cut(s)	1047
BtsI	GCAGTG	1 cut(s)	651
BtsIMutI	CAGTG	4 cut(s)	651, 1043, 1190, 1868
BveI	ACCTGC	1 cut(s)	1652
Cac8I	GCNNGC	2 cut(s)	1275, 1333
CciI	TCATGA	2 cut(s)	1096, 1458
CfoI	GCGC	2 cut(s)	71, 1279
Cfr10I	RCCGGY	1 cut(s)	998
Cfr13I	GGNCC	3 cut(s)	1007, 1125, 1664
CseI	GACGC	1 cut(s)	619
Csp6I	GTAC	6 cut(s)	191, 261, 973, 1442, 1562, 1634
CspAI	ACCGGT	1 cut(s)	998
CviAII	CATG	8 cut(s)	284, 1022, 1097, 1116, 1459, 1480, 1741, 1909
CviQI	GTAC	6 cut(s)	191, 261, 973, 1442, 1562, 1634
DdeI	CTNAG	3 cut(s)	501, 1591, 1898
DinI	GGCGCC	1 cut(s)	1278
DpnI	GATC	6 cut(s)	99, 306, 401, 827, 1369, 1745
DpnII	GATC	6 cut(s)	97, 304, 399, 825, 1367, 1743
DraIII	CACNNNGTG	1 cut(s)	686
DriI	GACNNNNNGTC	1 cut(s)	1594
Eam1104I	CTCTTC	2 cut(s)	235, 951
Eam1105I	GACNNNNNGTC	1 cut(s)	1594
EarI	CTCTTC	2 cut(s)	235, 951
EciI	GGCGGA	1 cut(s)	1894
Ecl136II	GAGCTC	2 cut(s)	563, 1152
Eco130I	CCWWGG	4 cut(s)	1115, 1436, 1908, 1922
Eco24I	GRGCYC	3 cut(s)	565, 1154, 1407
Eco31I	GGTCTC	2 cut(s)	626, 1809
Eco32I	GATATC	1 cut(s)	1382
Eco47I	GGWCC	3 cut(s)	1007, 1125, 1664
Eco53kI	GAGCTC	2 cut(s)	563, 1152
EcoICRI	GAGCTC	2 cut(s)	563, 1152
EcoRI	GAATTC	1 cut(s)	314
EcoRII	CCWGG	1 cut(s)	881
EcoRV	GATATC	1 cut(s)	1382
EcoT14I	CCWWGG	4 cut(s)	1115, 1436, 1908, 1922
EcoT38I	GRGCYC	3 cut(s)	565, 1154, 1407
EgeI	GGCGCC	1 cut(s)	1278
EheI	GGCGCC	1 cut(s)	1278
ErhI	CCWWGG	4 cut(s)	1115, 1436, 1908, 1922
FaeI	CATG	8 cut(s)	287, 1025, 1100, 1119, 1462, 1483, 1744, 1912
FatI	CATG	8 cut(s)	283, 1021, 1096, 1115, 1458, 1479, 1740, 1908
FbaI	TGATCA	2 cut(s)	97, 304
FblI	GTMKAC	1 cut(s)	199
Fnu4HI	GCNGC	5 cut(s)	244, 465, 588, 855, 1306
FokI	GGATG	1 cut(s)	1054
FriOI	GRGCYC	3 cut(s)	565, 1154, 1407
Fsp4HI	GCNGC	5 cut(s)	244, 465, 588, 855, 1306
FspBI	CTAG	4 cut(s)	153, 1203, 1263, 1775
GlaI	GCGC	2 cut(s)	70, 1278
GluI	GCNGC	5 cut(s)	244, 465, 588, 855, 1306
GsuI	CTGGAG	1 cut(s)	327
HaeII	RGCGCY	1 cut(s)	1280
HapII	CCGG	2 cut(s)	999, 1748
HgaI	GACGC	1 cut(s)	619
HhaI	GCGC	2 cut(s)	71, 1279
Hin1I	GRCGYC	1 cut(s)	1277
Hin1II	CATG	8 cut(s)	287, 1025, 1100, 1119, 1462, 1483, 1744, 1912
Hin6I	GCGC	2 cut(s)	69, 1277
HinP1I	GCGC	2 cut(s)	69, 1277
HincII	GTYRAC	3 cut(s)	200, 217, 1212
HindII	GTYRAC	3 cut(s)	200, 217, 1212
HindIII	AAGCTT	2 cut(s)	494, 503
HpaII	CCGG	2 cut(s)	999, 1748
HphI	GGTGA	5 cut(s)	266, 784, 805, 1013, 1598
Hpy166II	GTNNAC	7 cut(s)	186, 200, 217, 1010, 1125, 1212, 1415
Hpy188I	TCNGA	6 cut(s)	102, 604, 731, 1355, 1793, 1878
Hpy188III	TCNNGA	9 cut(s)	319, 344, 566, 823, 1097, 1147, 1459, 1730, 1932
Hpy8I	GTNNAC	7 cut(s)	186, 200, 217, 1010, 1125, 1212, 1415
Hpy99I	CGWCG	1 cut(s)	201
HpyAV	CCTTC	1 cut(s)	998
HpyCH4IV	ACGT	1 cut(s)	1250
HpyCH4V	TGCA	6 cut(s)	387, 644, 925, 1139, 1487, 1502
HpyF10VI	GCNNNNNNNGC	3 cut(s)	502, 584, 922
HpyF3I	CTNAG	3 cut(s)	501, 1591, 1898
HpySE526I	ACGT	1 cut(s)	1250
Hsp92I	GRCGYC	1 cut(s)	1277
Hsp92II	CATG	8 cut(s)	287, 1025, 1100, 1119, 1462, 1483, 1744, 1912
HspAI	GCGC	2 cut(s)	69, 1277
KasI	GGCGCC	1 cut(s)	1276
Ksp22I	TGATCA	2 cut(s)	97, 304
Kzo9I	GATC	6 cut(s)	97, 304, 399, 825, 1367, 1743
LguI	GCTCTTC	1 cut(s)	235
LmnI	GCTCC	8 cut(s)	386, 560, 568, 921, 988, 1302, 1821, 1907
Lsp1109I	GCAGC	5 cut(s)	255, 451, 574, 841, 1317
LweI	GCATC	2 cut(s)	1473, 1803
MaeI	CTAG	4 cut(s)	153, 1203, 1263, 1775
MaeII	ACGT	1 cut(s)	1250
MaeIII	GTNAC	8 cut(s)	279, 535, 554, 652, 793, 1510, 1586, 1885
MalI	GATC	6 cut(s)	99, 306, 401, 827, 1369, 1745
MboI	GATC	6 cut(s)	97, 304, 399, 825, 1367, 1743
MflI	RGATCY	2 cut(s)	399, 1367
MhlI	GDGCHC	3 cut(s)	565, 1154, 1407
MluCI	AATT	6 cut(s)	13, 41, 161, 314, 333, 1356
Mly113I	GGCGCC	1 cut(s)	1277
MlyI	GAGTC	1 cut(s)	1330
MmeI	TCCRAC	2 cut(s)	468, 545
MroXI	GAANNNNTTC	1 cut(s)	722
MseI	TTAA	4 cut(s)	396, 705, 1430, 1674
MslI	CAYNNNNRTG	3 cut(s)	207, 758, 1120
MspI	CCGG	2 cut(s)	999, 1748
MspR9I	CCNGG	2 cut(s)	883, 1748
MvaI	CCWGG	1 cut(s)	883
MvnI	CGCG	2 cut(s)	1388, 1643
MwoI	GCNNNNNNNGC	3 cut(s)	502, 584, 922
NarI	GGCGCC	1 cut(s)	1277
NciI	CCSGG	1 cut(s)	1748
NcoI	CCATGG	2 cut(s)	1115, 1908
NdeII	GATC	6 cut(s)	97, 304, 399, 825, 1367, 1743
NlaIII	CATG	8 cut(s)	287, 1025, 1100, 1119, 1462, 1483, 1744, 1912
NlaIV	GGNNCC	2 cut(s)	119, 1278
NmeAIII	GCCGAG	1 cut(s)	994
NmuCI	GTSAC	4 cut(s)	652, 793, 1586, 1885
OliI	CACNNNNGTG	1 cut(s)	758
PagI	TCATGA	2 cut(s)	1096, 1458
PciSI	GCTCTTC	1 cut(s)	235
PcsI	WCGNNNNNNNCGW	1 cut(s)	1557
PdmI	GAANNNNTTC	1 cut(s)	722
PfeI	GAWTC	9 cut(s)	133, 149, 328, 899, 1025, 1452, 1524, 1533, 1914
PfoI	TCCNGGA	2 cut(s)	881, 1746
PinAI	ACCGGT	1 cut(s)	998
PkrI	GCNGC	5 cut(s)	245, 466, 589, 856, 1307
PleI	GAGTC	1 cut(s)	1329
PluTI	GGCGCC	1 cut(s)	1280
PpsI	GAGTC	1 cut(s)	1329
Psp124BI	GAGCTC	2 cut(s)	565, 1154
Psp6I	CCWGG	1 cut(s)	881
PspGI	CCWGG	1 cut(s)	881
PspN4I	GGNNCC	2 cut(s)	119, 1278
PspPI	GGNCC	3 cut(s)	1007, 1125, 1664
PstI	CTGCAG	1 cut(s)	389
PsuI	RGATCY	2 cut(s)	399, 1367
RsaI	GTAC	6 cut(s)	192, 262, 974, 1443, 1563, 1635
RsaNI	GTAC	6 cut(s)	191, 261, 973, 1442, 1562, 1634
RseI	CAYNNNNRTG	3 cut(s)	207, 758, 1120
SacI	GAGCTC	2 cut(s)	565, 1154
SalI	GTCGAC	1 cut(s)	198
SapI	GCTCTTC	1 cut(s)	235
SaqAI	TTAA	4 cut(s)	396, 705, 1430, 1674
SatI	GCNGC	5 cut(s)	244, 465, 588, 855, 1306
Sau3AI	GATC	6 cut(s)	97, 304, 399, 825, 1367, 1743
Sau96I	GGNCC	3 cut(s)	1007, 1125, 1664
ScaI	AGTACT	1 cut(s)	262
SchI	GAGTC	1 cut(s)	1330
ScrFI	CCNGG	2 cut(s)	883, 1748
SduI	GDGCHC	3 cut(s)	565, 1154, 1407
SfaNI	GCATC	2 cut(s)	1473, 1803
SfcI	CTRYAG	1 cut(s)	385
SfoI	GGCGCC	1 cut(s)	1278
SgrAI	CRCCGGYG	1 cut(s)	998
SinI	GGWCC	3 cut(s)	1007, 1125, 1664
SmiMI	CAYNNNNRTG	3 cut(s)	207, 758, 1120
SmlI	CTYRAG	3 cut(s)	247, 365, 736
SmoI	CTYRAG	3 cut(s)	247, 365, 736
Sse9I	AATT	6 cut(s)	13, 41, 161, 314, 333, 1356
SsiI	CCGC	3 cut(s)	692, 1256, 1905
SspDI	GGCGCC	1 cut(s)	1276
SspI	AATATT	1 cut(s)	1788
SspMI	CTAG	4 cut(s)	153, 1203, 1263, 1775
SstI	GAGCTC	2 cut(s)	565, 1154
StyD4I	CCNGG	2 cut(s)	881, 1746
StyI	CCWWGG	4 cut(s)	1115, 1436, 1908, 1922
TaiI	ACGT	1 cut(s)	1253
TaqI	TCGA	8 cut(s)	29, 46, 199, 326, 824, 1146, 1700, 1721
TaqII	GACCGA	3 cut(s)	1142, 1541, 1852
TasI	AATT	6 cut(s)	13, 41, 161, 314, 333, 1356
TatI	WGTACW	2 cut(s)	260, 972
TfiI	GAWTC	9 cut(s)	133, 149, 328, 899, 1025, 1452, 1524, 1533, 1914
Tru1I	TTAA	4 cut(s)	396, 705, 1430, 1674
Tru9I	TTAA	4 cut(s)	396, 705, 1430, 1674
TscAI	CASTG	4 cut(s)	651, 1043, 1197, 1875
TseFI	GTSAC	4 cut(s)	652, 793, 1586, 1885
TseI	GCWGC	5 cut(s)	243, 464, 587, 854, 1305
Tsp45I	GTSAC	4 cut(s)	652, 793, 1586, 1885
TspDTI	ATGAA	8 cut(s)	73, 300, 715, 1085, 1116, 1444, 1631, 1906
TspGWI	ACGGA	1 cut(s)	573
TspRI	CASTG	4 cut(s)	651, 1043, 1197, 1875
VpaK11BI	GGWCC	3 cut(s)	1007, 1125, 1664
XapI	RAATTY	4 cut(s)	13, 41, 161, 314
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1041
XmiI	GTMKAC	1 cut(s)	199
XmnI	GAANNNNTTC	1 cut(s)	722
XspI	CTAG	4 cut(s)	153, 1203, 1263, 1775
ZrmI	AGTACT	1 cut(s)	262

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.