Rmu_ssc0000183.1_g000034

Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000183.1
OG0013551
Physical Location & Seq
Reverse (-)
167466 .. 169442
1977 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000183.1_g000034.1.cds

Sequence Viewer

Length: 1977 bp
atgggaggacccaattgtaaaaatgcccgatttcgtggggcgttcaatgcaatttgtgctctggtgttgttcttcttgttctacacccaggatagtttcatcaaaaacccgtttctgggtgcttcgaattcggttcttcctcctatctggagctccaaagttgatgcctttatgggcaatcgggtcgaaattatccgccggagaatggcccaggttaatgtgaatgttaatgttaatgttacttattctaattctagtggtattagagttaatgggtcagatgccaactatgttacagaggctgatcccaaagtgtgcactgggttgttcaaacaccatggttttgctactaaatgtgagtacttgattgcccacccggaatgtaatcccggcgggcactttaattacattaagtttctgtactgtgactgtgggagctttagctttctgggctatgttgctttgacaatttggttggctgcactgttctatctgttgggcaatactgccgcggattacttctgttgttcactggagaagctttcgagtctgttgaatttgccggccactgtggccggtgtgtctctgcttccgcttgggaatggtgctccggatgtgtttgccagcattgctgcttttgtggggaaggatgcgggcgacgtggggctgaatagtgtgttggggggagctgtttttgttacttgtattgttgttggtattatatctctttgtgtggctgataagggggttcagattgataggaagtgctttatcagagatatatgtttttttctctttacaatcttctcgcttgcgatgatgttggtggttgggaaggttactgttgggggtgctatagcatttgtgttgatttatgtggtttatgggtttgtggtggctgcgaatgagcttttgagaaaacatgttcgaaagttaaggtttgatgttgtaacaccattgcttccggttaagggaagtatattttcacagggaaatgaggaggatgaatccatatatgctgggctacttgaatctgaagaggggaatgacgtgccttacctccaaagtaagctgccgcagtggatgtgggcttcgaatgtagcaatttattcaaatcagagtgcgaagagtagtatggacagctcaaggtcattgtggggttggaaggatgaggaacatatcaatgaaagctcttcctcttctaaagttctatcaatgctagagattccattgacactgccgagacggttgacaatccccataattgaggaggataggtggtccaaaggttacgctgttgcaagtgctgtgttagctcctattcttctggtatttttatggagcactcaagatgatgtgggatctacgagtgtgaagattgcgtattttataggtattgtctctggtgttgttttgggtatccttgcatatctatacaccagagctgaccaacctccccgcaaatttttatttccatgggttttgggaggatttttcatgagtattatctggttctacattgttgcaaatgagctgctttcattactggtggcactgggtgtaatttttggaataaatccatcaattctcggattgactgtattagcatggggcaactcaatgggtgatttaatgtcgaatgttgcactggcaattaatggtggtgatggtgtacaaattgcaatgtcaggatgttatgccgggcctatgttcaacacacttgctggcttggggatgtcgatgctgcttgccgcctggtctaatagaccggcatcttatataatacccagagatagtagcttgtattttacaatgggattcctagtggcagggcttatttggtcactgattgtgctgcccaggaatgacatgcgacccaacaagatcttaggagtcggccttataacactctatatgatatttctctccctcagaatagccgcatcaatgggggcactgtcactggtagttgtataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0051179 GO:0051234
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Na_Ca_ex

Protein Analysis

658

Amino Acids

71.5

Weight (kDa)

7.84

Isoelectric Point (pI)

33.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013551)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G54115 AT3G14070
fragaria_vesca FvH4_1g08880
malus_domestica MD02G1094200.v1.1 MD15G1219100.v1.1
prunus_persica Prupe.7G196800_v2.0.a1
pyrus_communis pycom02g07420 pycom15g19420
rosa_chinensis RchiOBHm_Chr2g0095341
rosa_laevigata RLG00000016556
rosa_multiflora Rmu_ssc0000183.1_g000034
rosa_roxburghii Rroxscaffold_2G00146460
rosa_rugosa Rorug02G0049800
rosa_samantha Rh2AG097900 Rh2BG099100 Rh2CG101200 Rh2DG098800
rosa_wichuraiana Rw2G007390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1904
AccII CGCG 1 cut(s) 512
AccIII TCCGGA 1 cut(s) 610
AclWI GGATC 2 cut(s) 299, 1369
AcoI YGGCCR 2 cut(s) 564, 573
AcsI RAATTY 3 cut(s) 127, 556, 1463
AcuI CTGAAG 1 cut(s) 1056
AdeI CACNNNGTG 1 cut(s) 1559
AfaI GTAC 3 cut(s) 362, 422, 1674
AfiI CCNNNNNNNGG 4 cut(s) 115, 116, 205, 971
AflIII ACRYGT 1 cut(s) 922
AgsI TTSAA 6 cut(s) 46, 331, 556, 1031, 1113, 1714
AjiI CACGTC 2 cut(s) 661, 1051
AjnI CCWGG 4 cut(s) 87, 210, 1754, 1859
AjuI GAANNNNNNNTTGG 2 cut(s) 662, 694
Alw21I GWGCWC 5 cut(s) 61, 155, 320, 610, 1346
Alw26I GTCTC 3 cut(s) 588, 1237, 1405
Alw44I GTGCAC 1 cut(s) 316
AlwI GGATC 2 cut(s) 299, 1369
AlwNI CAGNNNCTG 1 cut(s) 302
Aor13HI TCCGGA 1 cut(s) 610
AoxI GGCC 5 cut(s) 207, 564, 573, 1703, 1897
ApaLI GTGCAC 1 cut(s) 316
ApeKI GCWGC 7 cut(s) 479, 632, 899, 1072, 1534, 1744, 1855
ApoI RAATTY 3 cut(s) 127, 556, 1463
AseI ATTAAT 1 cut(s) 1656
AspS9I GGNCC 4 cut(s) 8, 208, 1281, 1703
AsuC2I CCSGG 3 cut(s) 377, 390, 1702
AsuHPI GGTGA 2 cut(s) 1637, 1676
AsuII TTCGAA 3 cut(s) 125, 928, 1094
AvaII GGWCC 2 cut(s) 8, 1281
BaeGI GKGCMC 3 cut(s) 320, 399, 1957
BanII GRGCYC 1 cut(s) 155
Bbv12I GWGCWC 5 cut(s) 61, 155, 320, 610, 1346
BbvI GCAGC 7 cut(s) 466, 619, 886, 1059, 1521, 1731, 1842
BccI CCATC 2 cut(s) 1588, 1661
BcgI CGANNNNNNTGC 2 cut(s) 166, 200
BciT130I CCWGG 4 cut(s) 89, 212, 1756, 1861
BciVI GTATCC 1 cut(s) 1430
BcnI CCSGG 3 cut(s) 377, 390, 1702
BcoDI GTCTC 3 cut(s) 588, 1237, 1405
BfaI CTAG 3 cut(s) 255, 1220, 1823
BfmI CTRYAG 1 cut(s) 855
BfuI GTATCC 1 cut(s) 1430
BglI GCCNNNNNGGC 1 cut(s) 572
BglII AGATCT 1 cut(s) 1884
BmcAI AGTACT 1 cut(s) 362
Bme1390I CCNGG 7 cut(s) 89, 212, 377, 390, 1702, 1756, 1861
Bme18I GGWCC 2 cut(s) 8, 1281
BmgBI CACGTC 2 cut(s) 661, 1051
BmgT120I GGNCC 4 cut(s) 8, 208, 1281, 1703
BmiI GGNNCC 1 cut(s) 10
BmrFI CCNGG 7 cut(s) 89, 212, 377, 390, 1702, 1756, 1861
BmrI ACTGGG 2 cut(s) 330, 1565
BmsI GCATC 6 cut(s) 154, 271, 640, 1731, 1781, 1952
BmuI ACTGGG 2 cut(s) 330, 1565
BpmI CTGGAG 2 cut(s) 169, 554
Bpu14I TTCGAA 3 cut(s) 125, 928, 1094
BpuEI CTTGAG 2 cut(s) 1129, 1332
BpuMI CCSGG 3 cut(s) 377, 390, 1702
BsaJI CCNNGG 6 cut(s) 87, 210, 337, 510, 1475, 1859
BsaWI WCCGGW 2 cut(s) 610, 964
BsaXI ACNNNNNCTCC 2 cut(s) 1262, 1292
Bsc4I CCNNNNNNNGG 4 cut(s) 115, 116, 205, 971
Bse118I RCCGGY 3 cut(s) 562, 575, 1768
Bse1I ACTGG 6 cut(s) 325, 537, 1551, 1560, 1653, 1968
Bse3DI GCAATG 3 cut(s) 627, 956, 1689
BseAI TCCGGA 1 cut(s) 610
BseBI CCWGG 4 cut(s) 89, 212, 1756, 1861
BseDI CCNNGG 6 cut(s) 87, 210, 337, 510, 1475, 1859
BseGI GGATG 7 cut(s) 619, 655, 1009, 1089, 1174, 1697, 1740
BseLI CCNNNNNNNGG 4 cut(s) 115, 116, 205, 971
BseMI GCAATG 3 cut(s) 627, 956, 1689
BseMII CTCAG 1 cut(s) 1945
BseNI ACTGG 6 cut(s) 325, 537, 1551, 1560, 1653, 1968
BseRI GAGGAG 2 cut(s) 1013, 1283
BseSI GKGCMC 3 cut(s) 320, 399, 1957
BseXI GCAGC 7 cut(s) 466, 619, 886, 1059, 1521, 1731, 1842
BseYI CCCAGC 1 cut(s) 1019
BsgI GTGCAG 1 cut(s) 465
Bsh1236I CGCG 1 cut(s) 512
BshFI GGCC 5 cut(s) 209, 566, 575, 1705, 1899
BsiHKAI GWGCWC 5 cut(s) 61, 155, 320, 610, 1346
BsiSI CCGG 9 cut(s) 199, 377, 390, 563, 576, 611, 965, 1701, 1769
BslI CCNNNNNNNGG 4 cut(s) 115, 116, 205, 971
BsmAI GTCTC 3 cut(s) 588, 1237, 1405
BsmBI CGTCTC 1 cut(s) 1237
BsnI GGCC 5 cut(s) 209, 566, 575, 1705, 1899
Bsp119I TTCGAA 3 cut(s) 125, 928, 1094
Bsp1286I GDGCHC 7 cut(s) 61, 155, 320, 399, 610, 1346, 1957
Bsp13I TCCGGA 1 cut(s) 610
Bsp1407I TGTACA 1 cut(s) 1672
Bsp143I GATC 3 cut(s) 304, 1361, 1884
Bsp19I CCATGG 2 cut(s) 337, 1475
BspANI GGCC 5 cut(s) 209, 566, 575, 1705, 1899
BspCNI CTCAG 1 cut(s) 1944
BspEI TCCGGA 1 cut(s) 610
BspFNI CGCG 1 cut(s) 512
BspHI TCATGA 1 cut(s) 1497
BspLI GGNNCC 1 cut(s) 10
BspPI GGATC 2 cut(s) 299, 1369
BspQI GCTCTTC 1 cut(s) 1198
BspT104I TTCGAA 3 cut(s) 125, 928, 1094
BsrDI GCAATG 3 cut(s) 627, 956, 1689
BsrFI RCCGGY 3 cut(s) 562, 575, 1768
BsrGI TGTACA 1 cut(s) 1672
BsrI ACTGG 6 cut(s) 325, 537, 1551, 1560, 1653, 1968
BssAI RCCGGY 3 cut(s) 562, 575, 1768
BssECI CCNNGG 6 cut(s) 87, 210, 337, 510, 1475, 1859
BssMI GATC 3 cut(s) 304, 1361, 1884
BssT1I CCWWGG 2 cut(s) 337, 1475
Bst2UI CCWGG 4 cut(s) 89, 212, 1756, 1861
Bst4CI ACNGT 8 cut(s) 425, 431, 486, 571, 844, 1248, 1600, 1959
Bst6I CTCTTC 4 cut(s) 1032, 1121, 1198, 1204
BstAPI GCANNNNNTGC 1 cut(s) 56
BstAUI TGTACA 1 cut(s) 1672
BstBI TTCGAA 3 cut(s) 125, 928, 1094
BstC8I GCNNGC 7 cut(s) 395, 564, 625, 655, 813, 1726, 1749
BstDEI CTNAG 2 cut(s) 1888, 1931
BstDSI CCRYGG 3 cut(s) 337, 510, 1475
BstF5I GGATG 7 cut(s) 619, 655, 1009, 1089, 1174, 1697, 1740
BstFNI CGCG 1 cut(s) 512
BstKTI GATC 3 cut(s) 307, 1364, 1887
BstMAI GTCTC 3 cut(s) 588, 1237, 1405
BstMBI GATC 3 cut(s) 304, 1361, 1884
BstMWI GCNNNNNNNGC 6 cut(s) 47, 56, 450, 572, 629, 1313
BstNI CCWGG 4 cut(s) 89, 212, 1756, 1861
BstNSI RCATGY 2 cut(s) 926, 1873
BstSCI CCNGG 7 cut(s) 87, 210, 375, 388, 1700, 1754, 1859
BstSFI CTRYAG 1 cut(s) 855
BstSLI GKGCMC 3 cut(s) 320, 399, 1957
BstUI CGCG 1 cut(s) 512
BstV1I GCAGC 7 cut(s) 466, 619, 886, 1059, 1521, 1731, 1842
BstX2I RGATCY 2 cut(s) 1361, 1884
BstYI RGATCY 2 cut(s) 1361, 1884
BsuI GTATCC 1 cut(s) 1430
BsuRI GGCC 5 cut(s) 209, 566, 575, 1705, 1899
BtgI CCRYGG 3 cut(s) 337, 510, 1475
BtgZI GCGATG 1 cut(s) 830
BtrI CACGTC 2 cut(s) 661, 1051
BtsCI GGATG 7 cut(s) 619, 655, 1009, 1089, 1174, 1697, 1740
BtsI GCAGTG 2 cut(s) 1085, 1235
Cac8I GCNNGC 7 cut(s) 395, 564, 625, 655, 813, 1726, 1749
CaiI CAGNNNCTG 1 cut(s) 302
CciI TCATGA 1 cut(s) 1497
Cfr10I RCCGGY 3 cut(s) 562, 575, 1768
Cfr13I GGNCC 4 cut(s) 8, 208, 1281, 1703
Cfr42I CCGCGG 1 cut(s) 513
Csp6I GTAC 3 cut(s) 361, 421, 1673
CviAII CATG 6 cut(s) 338, 923, 1476, 1498, 1608, 1870
CviQI GTAC 3 cut(s) 361, 421, 1673
DdeI CTNAG 2 cut(s) 1888, 1931
DpnI GATC 3 cut(s) 306, 1363, 1886
DpnII GATC 3 cut(s) 304, 1361, 1884
DraIII CACNNNGTG 1 cut(s) 1559
EaeI YGGCCR 2 cut(s) 564, 573
Eam1104I CTCTTC 4 cut(s) 1032, 1121, 1198, 1204
EarI CTCTTC 4 cut(s) 1032, 1121, 1198, 1204
EciI GGCGGA 1 cut(s) 185
Ecl136II GAGCTC 1 cut(s) 153
Eco130I CCWWGG 2 cut(s) 337, 1475
Eco24I GRGCYC 1 cut(s) 155
Eco47I GGWCC 2 cut(s) 8, 1281
Eco53kI GAGCTC 1 cut(s) 153
Eco57I CTGAAG 1 cut(s) 1056
EcoICRI GAGCTC 1 cut(s) 153
EcoO109I RGGNCCY 1 cut(s) 8
EcoRI GAATTC 1 cut(s) 127
EcoRII CCWGG 4 cut(s) 87, 210, 1754, 1859
EcoT14I CCWWGG 2 cut(s) 337, 1475
EcoT38I GRGCYC 1 cut(s) 155
ErhI CCWWGG 2 cut(s) 337, 1475
Esp3I CGTCTC 1 cut(s) 1237
FaeI CATG 6 cut(s) 341, 926, 1479, 1501, 1611, 1873
FatI CATG 6 cut(s) 337, 922, 1475, 1497, 1607, 1869
FauI CCCGC 3 cut(s) 386, 646, 1466
FokI GGATG 7 cut(s) 626, 662, 1016, 1096, 1181, 1704, 1747
FriOI GRGCYC 1 cut(s) 155
FspBI CTAG 3 cut(s) 255, 1220, 1823
GsaI CCCAGC 1 cut(s) 1023
GsuI CTGGAG 2 cut(s) 169, 554
HaeIII GGCC 5 cut(s) 209, 566, 575, 1705, 1899
HapII CCGG 9 cut(s) 199, 377, 390, 563, 576, 611, 965, 1701, 1769
Hin1II CATG 6 cut(s) 341, 926, 1479, 1501, 1611, 1873
HincII GTYRAC 1 cut(s) 1251
HindII GTYRAC 1 cut(s) 1251
HindIII AAGCTT 1 cut(s) 539
HinfI GANTC 6 cut(s) 547, 1007, 1031, 1225, 1818, 1893
HpaII CCGG 9 cut(s) 199, 377, 390, 563, 576, 611, 965, 1701, 1769
HphI GGTGA 2 cut(s) 1637, 1676
Hpy166II GTNNAC 4 cut(s) 318, 530, 1251, 1673
Hpy188I TCNGA 7 cut(s) 280, 753, 776, 1036, 1119, 1592, 1934
Hpy188III TCNNGA 5 cut(s) 148, 611, 1349, 1498, 1689
Hpy8I GTNNAC 4 cut(s) 318, 530, 1251, 1673
Hpy99I CGWCG 1 cut(s) 662
HpyAV CCTTC 3 cut(s) 640, 829, 1159
HpyCH4III ACNGT 8 cut(s) 425, 431, 486, 571, 844, 1248, 1600, 1959
HpyCH4IV ACGT 2 cut(s) 660, 1050
HpyCH4V TGCA 8 cut(s) 50, 318, 482, 1301, 1427, 1526, 1646, 1682
HpyF10VI GCNNNNNNNGC 6 cut(s) 47, 56, 450, 572, 629, 1313
HpyF3I CTNAG 2 cut(s) 1888, 1931
HpySE526I ACGT 2 cut(s) 660, 1050
Hsp92II CATG 6 cut(s) 341, 926, 1479, 1501, 1611, 1873
Kpn2I TCCGGA 1 cut(s) 610
KroI GCCGGC 1 cut(s) 562
KroNI GCCGGC 1 cut(s) 564
KspI CCGCGG 1 cut(s) 513
Kzo9I GATC 3 cut(s) 304, 1361, 1884
LguI GCTCTTC 1 cut(s) 1198
LmnI GCTCC 7 cut(s) 150, 158, 435, 613, 686, 1321, 1341
Lsp1109I GCAGC 7 cut(s) 466, 619, 886, 1059, 1521, 1731, 1842
LweI GCATC 6 cut(s) 154, 271, 640, 1731, 1781, 1952
MaeI CTAG 3 cut(s) 255, 1220, 1823
MaeII ACGT 2 cut(s) 660, 1050
MaeIII GTNAC 9 cut(s) 238, 292, 425, 697, 838, 949, 1289, 1842, 1959
MalI GATC 3 cut(s) 306, 1363, 1886
MboI GATC 3 cut(s) 304, 1361, 1884
MboII GAAGA 9 cut(s) 64, 128, 796, 1049, 1138, 1185, 1191, 1316, 1387
MfeI CAATTG 1 cut(s) 13
MflI RGATCY 2 cut(s) 1361, 1884
MhlI GDGCHC 7 cut(s) 61, 155, 320, 399, 610, 1346, 1957
MlyI GAGTC 2 cut(s) 556, 1902
MmeI TCCRAC 1 cut(s) 1142
MroI TCCGGA 1 cut(s) 610
MroNI GCCGGC 1 cut(s) 562
MslI CAYNNNNRTG 1 cut(s) 1182
MspA1I CMGCKG 1 cut(s) 512
MspI CCGG 9 cut(s) 199, 377, 390, 563, 576, 611, 965, 1701, 1769
MspR9I CCNGG 7 cut(s) 89, 212, 377, 390, 1702, 1756, 1861
MunI CAATTG 1 cut(s) 13
MvaI CCWGG 4 cut(s) 89, 212, 1756, 1861
MvnI CGCG 1 cut(s) 512
MwoI GCNNNNNNNGC 6 cut(s) 47, 56, 450, 572, 629, 1313
NaeI GCCGGC 1 cut(s) 564
NciI CCSGG 3 cut(s) 377, 390, 1702
NcoI CCATGG 2 cut(s) 337, 1475
NdeII GATC 3 cut(s) 304, 1361, 1884
NgoMIV GCCGGC 1 cut(s) 562
NlaIII CATG 6 cut(s) 341, 926, 1479, 1501, 1611, 1873
NlaIV GGNNCC 1 cut(s) 10
NmeAIII GCCGAG 1 cut(s) 1266
NmuCI GTSAC 3 cut(s) 425, 1842, 1959
NspI RCATGY 2 cut(s) 926, 1873
NspV TTCGAA 3 cut(s) 125, 928, 1094
PagI TCATGA 1 cut(s) 1497
PciI ACATGT 1 cut(s) 922
PciSI GCTCTTC 1 cut(s) 1198
PdiI GCCGGC 1 cut(s) 564
PfeI GAWTC 4 cut(s) 1007, 1031, 1225, 1818
PleI GAGTC 2 cut(s) 555, 1901
PpsI GAGTC 2 cut(s) 555, 1901
PpuMI RGGWCCY 1 cut(s) 8
PscI ACATGT 1 cut(s) 922
PshBI ATTAAT 1 cut(s) 1656
PsiI TTATAA 1 cut(s) 1904
Psp124BI GAGCTC 1 cut(s) 155
Psp5II RGGWCCY 1 cut(s) 8
Psp6I CCWGG 4 cut(s) 87, 210, 1754, 1859
PspFI CCCAGC 1 cut(s) 1019
PspGI CCWGG 4 cut(s) 87, 210, 1754, 1859
PspN4I GGNNCC 1 cut(s) 10
PspPI GGNCC 4 cut(s) 8, 208, 1281, 1703
PspPPI RGGWCCY 1 cut(s) 8
PstNI CAGNNNCTG 1 cut(s) 302
PsuI RGATCY 2 cut(s) 1361, 1884
RsaI GTAC 3 cut(s) 362, 422, 1674
RsaNI GTAC 3 cut(s) 361, 421, 1673
RseI CAYNNNNRTG 1 cut(s) 1182
SacI GAGCTC 1 cut(s) 155
SacII CCGCGG 1 cut(s) 513
SapI GCTCTTC 1 cut(s) 1198
Sau3AI GATC 3 cut(s) 304, 1361, 1884
Sau96I GGNCC 4 cut(s) 8, 208, 1281, 1703
ScaI AGTACT 1 cut(s) 362
SchI GAGTC 2 cut(s) 556, 1902
ScrFI CCNGG 7 cut(s) 89, 212, 377, 390, 1702, 1756, 1861
SduI GDGCHC 7 cut(s) 61, 155, 320, 399, 610, 1346, 1957
SfaNI GCATC 6 cut(s) 154, 271, 640, 1731, 1781, 1952
SfcI CTRYAG 1 cut(s) 855
SfiI GGCCNNNNNGGCC 1 cut(s) 572
Sfr303I CCGCGG 1 cut(s) 513
SfuI TTCGAA 3 cut(s) 125, 928, 1094
SgrBI CCGCGG 1 cut(s) 513
SinI GGWCC 2 cut(s) 8, 1281
SmiMI CAYNNNNRTG 1 cut(s) 1182
SmlI CTYRAG 2 cut(s) 1144, 1347
SmoI CTYRAG 2 cut(s) 1144, 1347
SspMI CTAG 3 cut(s) 255, 1220, 1823
SstI GAGCTC 1 cut(s) 155
StyD4I CCNGG 7 cut(s) 87, 210, 375, 388, 1700, 1754, 1859
StyI CCWWGG 2 cut(s) 337, 1475
TaaI ACNGT 8 cut(s) 425, 431, 486, 571, 844, 1248, 1600, 1959
TaiI ACGT 2 cut(s) 663, 1053
TaqI TCGA 7 cut(s) 125, 186, 545, 928, 1094, 1637, 1739
TatI WGTACW 3 cut(s) 360, 420, 1672
TauI GCSGC 4 cut(s) 512, 1078, 1754, 1943
TfiI GAWTC 4 cut(s) 1007, 1031, 1225, 1818
TseFI GTSAC 3 cut(s) 425, 1842, 1959
TseI GCWGC 7 cut(s) 479, 632, 899, 1072, 1534, 1744, 1855
Tsp45I GTSAC 3 cut(s) 425, 1842, 1959
TspDTI ATGAA 5 cut(s) 88, 1020, 1200, 1486, 1530
VneI GTGCAC 1 cut(s) 316
VpaK11BI GGWCC 2 cut(s) 8, 1281
VspI ATTAAT 1 cut(s) 1656
XapI RAATTY 3 cut(s) 127, 556, 1463
XceI RCATGY 2 cut(s) 926, 1873
XspI CTAG 3 cut(s) 255, 1220, 1823
ZrmI AGTACT 1 cut(s) 362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.