MD15G1219100.v1.1

Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0013551
Physical Location & Seq
Reverse (-)
17708721 .. 17711343
2623 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1219100.v1.1.491

Sequence Viewer

Length: 1962 bp
ATGATCAAACCCAAGTGGTTTTTTGGGGCGGAAAATTCCAAATCTCGTGGGCTTTTCAATGGAATTTGTACTTTGGTATTGGTCTTCTTGTTCTACAGCCAGGATAGCTTTCTTAGAAACCCTTCTCTGGGTGGTTCCCCTTCGGTTCTTCCTCCTCGATGGAGCTCCAAAGTAAATGGATTTGGCGATCCTGGTCGTCAGGTCGTAATTATTCGCCGGAGGATTGCCGAAGTTGATGTTTCTCCGTCGAATTATAGTGTCAGTGTTAATGGGTCGGATGTCAATTTGAGATCAGAACCTAATCCCCAATTATGCACCGGGTTGTTCAAACACGAAGGGTATCGGAGCAAATGTGAGTTCTTGATTGCCCATCCAGAGTGTACTTCCGGTGGGTATTTGAATTACATTCATTTCTTTTACTGCAGCTGTGAGAAAGTTAGCATTTTGGGGTATGTAGTGTTGGCAATTTGGCTAGCTGCATTGTTCTATCTTTTGGGTAATACTGCGGCAGATTACTTCTGTTGTTCTCTGGAGAAGCTTTCGAGTCTCTTGAAGCTACCGGCTACTGTGGCCGGTGTGTCTCTGCTTCCACTCGGGAATGGCGCTCCTGATGTGTTTGCCAGCATTGCTGCTTTTGTGGGTAAGGATGCCGGGGGAGTGGGCCTTAATAGTGTGTTGGGGGGAGCTGTCTTCGTTACTTGTATTGTTGTTGGGACTATATCTCTATGTGTGGCGGATAAGGGGTTTCAGATTGATAAGAAATGCTTTATCAGAGATATATGTTTTTTCCTCTTTACTGTTATGTCTCTTGCCTTAATGTTGATGGTTGGTGAGGTTACTGTCTGGGGTGCTATAGCGTTTGTCTTGATTTACGTGGTTTATGCATTTGTGGTCGCTGCAAACGAGCTTCTGAGGAAACATGTTCGAAAATTGAGGTTAGATGCTGTAACACCATTGCTACCGGTTAGGGGAAGTATATTTTCTCAGGGAAGCGATGAAGAGGAATCTGTATATGCTTCGCTCCTTGAGTCTGAATCAGACAGCGAGGTACCTCAGCTCCAAAGTAAGTTGCCACAGTGGATGTGGGCTTCAAATGTGGCAATTTATTCGAATCACGATGTGAAGGCTGGTTCAGACAGTCCAAGGTCATTGTGGGGTTGGAACGAGGATGAAACAGTGAAGGAAAACTCTTCCTCTTTTAGTTTTTTATCACTGCTGGAGATTCCGTTGACACTGCCAAGACGGTTGACGATCCCTATAGTCGAGGAGGATAGGTGGTCCAAAGGTTATGCTGTTGCCAGTGCTGTGTTAGCTCCCATTCTTCTGTTATTCTTATGGAACACCCAAGAAGATGTCGGATCTCTGAGCAAGGAAATTGCCTACTTTATAGGCTTTCTCTGCAGTGGTGTCTTTGGCATTCTTGCATATCGACACACCAGACCGGACCAGCCCCCTCGCAAATTTTTATTTCCGTGGGTTTTAGGAGGGTTTTTTATGAGCATCATCTGGTTCTACATTGTTGCAAACGAGCTCGTCGCCTTGCTGGTGGCATTTGGCGTAATTTTTGGAATTAGTCCATCAATCCTTGGATTGACTGTATTAGCATGGGGAAACTCAATGGGTGATTTAATGTCAAACGTTGCATTGGCAATGAATGGTGGAGATGGTGTACAGATTGCAATGTCAGGATGTTATGCCGGACCTATGTTTAACACACTTGCTGGTTTGGGGATCTCAATGCTGCTTGCATCCTGGTCTCAGAGGCCGGTACCGTACAAAATTCCCAAAGATAACAGCTTGTTTTATACAATGGGATTTCTAATATCAGGGCTTCTATGGTCACTTGTTGTGCTACCCAGGAATGGCATGCGCCTTAACAAGACCTTAGGACTTGGCCTCATAACAATCTATTTGGTATTTCTCTCCCTCAGGCTAGGCACCTCAACGGGAGTGCTGTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0051179 GO:0051234
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Na_Ca_ex

Protein Analysis

654

Amino Acids

71.44

Weight (kDa)

7.84

Isoelectric Point (pI)

41.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_Ca_ex PF01699 155 - 298 2.1e-24 Sodium/calcium exchanger protein
Na_Ca_ex PF01699 493 - 644 6.1e-29 Sodium/calcium exchanger protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013551)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G54115 AT3G14070
fragaria_vesca FvH4_1g08880
malus_domestica MD02G1094200.v1.1 MD15G1219100.v1.1
prunus_persica Prupe.7G196800_v2.0.a1
pyrus_communis pycom02g07420 pycom15g19420
rosa_chinensis RchiOBHm_Chr2g0095341
rosa_laevigata RLG00000016556
rosa_multiflora Rmu_ssc0000183.1_g000034
rosa_roxburghii Rroxscaffold_2G00146460
rosa_rugosa Rorug02G0049800
rosa_samantha Rh2AG097900 Rh2BG099100 Rh2CG101200 Rh2DG098800
rosa_wichuraiana Rw2G007390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 1048, 1768
AccB1I GGYRCC 3 cut(s) 1048, 1768, 1937
AciI CCGC 3 cut(s) 29, 506, 734
AclI AACGTT 1 cut(s) 1638
AclWI GGATC 4 cut(s) 182, 1246, 1366, 1739
AcoI YGGCCR 1 cut(s) 570
AcsI RAATTY 4 cut(s) 34, 63, 1460, 1779
AdeI CACNNNGTG 1 cut(s) 1120
AfaI GTAC 6 cut(s) 70, 382, 1050, 1671, 1770, 1775
AfiI CCNNNNNNNGG 4 cut(s) 127, 128, 968, 1862
AflIII ACRYGT 1 cut(s) 919
AgeI ACCGGT 1 cut(s) 961
AgsI TTSAA 5 cut(s) 58, 328, 400, 553, 1092
AjnI CCWGG 4 cut(s) 99, 190, 1751, 1856
Alw21I GWGCWC 2 cut(s) 167, 1533
Alw26I GTCTC 4 cut(s) 551, 585, 810, 1761
AlwI GGATC 4 cut(s) 182, 1246, 1366, 1739
Ama87I CYCGRG 1 cut(s) 593
AoxI GGCC 4 cut(s) 570, 661, 1763, 1894
ApeKI GCWGC 5 cut(s) 423, 476, 629, 896, 1741
ApoI RAATTY 4 cut(s) 34, 63, 1460, 1779
AsiGI ACCGGT 1 cut(s) 961
Asp700I GAANNNNTTC 1 cut(s) 121
Asp718I GGTACC 2 cut(s) 1048, 1768
AspLEI GCGC 2 cut(s) 605, 1872
AspS9I GGNCC 4 cut(s) 661, 1278, 1444, 1700
AsuC2I CCSGG 2 cut(s) 319, 652
AsuHPI GGTGA 2 cut(s) 842, 1634
AsuII TTCGAA 2 cut(s) 925, 1109
AsuNHI GCTAGC 1 cut(s) 472
AvaI CYCGRG 1 cut(s) 593
AvaII GGWCC 3 cut(s) 1278, 1444, 1700
AxyI CCTNAGG 2 cut(s) 1885, 1928
BanI GGYRCC 3 cut(s) 1048, 1768, 1937
BanII GRGCYC 2 cut(s) 167, 1533
BauI CACGAG 1 cut(s) 45
BbsI GAAGAC 2 cut(s) 76, 682
Bbv12I GWGCWC 2 cut(s) 167, 1533
BbvCI CCTCAGC 1 cut(s) 1053
BbvI GCAGC 5 cut(s) 435, 463, 616, 883, 1728
BccI CCATC 5 cut(s) 153, 378, 817, 1585, 1658
BcgI CGANNNNNNTGC 2 cut(s) 1089, 1123
BciT130I CCWGG 4 cut(s) 101, 192, 1753, 1858
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 2 cut(s) 319, 652
BcoDI GTCTC 4 cut(s) 551, 585, 810, 1761
BfaI CTAG 2 cut(s) 473, 1934
BfmI CTRYAG 5 cut(s) 94, 421, 852, 1257, 1399
BfoI RGCGCY 1 cut(s) 606
BisI GCNGC 6 cut(s) 424, 477, 507, 630, 897, 1742
BlsI GCNGC 6 cut(s) 425, 478, 508, 631, 898, 1743
Bme1390I CCNGG 6 cut(s) 101, 192, 319, 652, 1753, 1858
Bme18I GGWCC 3 cut(s) 1278, 1444, 1700
BmeT110I CYCGRG 1 cut(s) 593
BmgT120I GGNCC 4 cut(s) 661, 1278, 1444, 1700
BmiI GGNNCC 4 cut(s) 136, 1050, 1770, 1939
BmrFI CCNGG 6 cut(s) 101, 192, 319, 652, 1753, 1858
BmsI GCATC 4 cut(s) 637, 931, 1509, 1757
BmtI GCTAGC 1 cut(s) 476
BpiI GAAGAC 2 cut(s) 76, 682
BpmI CTGGAG 2 cut(s) 551, 1238
Bpu10I CCTNAGC 1 cut(s) 1053
Bpu14I TTCGAA 2 cut(s) 925, 1109
BpuEI CTTGAG 1 cut(s) 1046
BpuMI CCSGG 2 cut(s) 319, 652
BsaAI YACGTR 1 cut(s) 874
BsaI GGTCTC 1 cut(s) 1761
BsaJI CCNNGG 5 cut(s) 651, 1142, 1472, 1585, 1856
BsaWI WCCGGW 3 cut(s) 386, 961, 1441
Bsc4I CCNNNNNNNGG 4 cut(s) 127, 128, 968, 1862
Bse118I RCCGGY 4 cut(s) 559, 572, 961, 1765
Bse1I ACTGG 1 cut(s) 1299
Bse21I CCTNAGG 2 cut(s) 1885, 1928
Bse3DI GCAATG 4 cut(s) 624, 953, 1656, 1686
BseBI CCWGG 4 cut(s) 101, 192, 1753, 1858
BseDI CCNNGG 5 cut(s) 651, 1142, 1472, 1585, 1856
BseGI GGATG 7 cut(s) 283, 370, 652, 1086, 1174, 1694, 1748
BseLI CCNNNNNNNGG 4 cut(s) 127, 128, 968, 1862
BseMI GCAATG 4 cut(s) 624, 953, 1656, 1686
BseMII CTCAG 6 cut(s) 902, 998, 1067, 1355, 1772, 1942
BseNI ACTGG 1 cut(s) 1299
BseRI GAGGAG 2 cut(s) 144, 1280
BseXI GCAGC 5 cut(s) 435, 463, 616, 883, 1728
BshFI GGCC 4 cut(s) 572, 663, 1765, 1896
BshNI GGYRCC 3 cut(s) 1048, 1768, 1937
BshTI ACCGGT 1 cut(s) 961
BsiHKAI GWGCWC 2 cut(s) 167, 1533
BsiHKCI CYCGRG 1 cut(s) 593
BslFI GGGAC 1 cut(s) 727
BslI CCNNNNNNNGG 4 cut(s) 127, 128, 968, 1862
BsmAI GTCTC 4 cut(s) 551, 585, 810, 1761
BsmFI GGGAC 1 cut(s) 727
BsmI GAATGC 1 cut(s) 1416
BsnI GGCC 4 cut(s) 572, 663, 1765, 1896
Bso31I GGTCTC 1 cut(s) 1761
BsoBI CYCGRG 1 cut(s) 593
Bsp119I TTCGAA 2 cut(s) 925, 1109
Bsp1286I GDGCHC 2 cut(s) 167, 1533
Bsp1407I TGTACA 1 cut(s) 1669
Bsp143I GATC 6 cut(s) 3, 187, 290, 1251, 1358, 1731
BspACI CCGC 3 cut(s) 29, 506, 734
BspANI GGCC 4 cut(s) 572, 663, 1765, 1896
BspCNI CTCAG 6 cut(s) 903, 997, 1066, 1356, 1771, 1941
BspLI GGNNCC 4 cut(s) 136, 1050, 1770, 1939
BspMAI CTGCAG 2 cut(s) 425, 1403
BspOI GCTAGC 1 cut(s) 476
BspPI GGATC 4 cut(s) 182, 1246, 1366, 1739
BspT104I TTCGAA 2 cut(s) 925, 1109
BspT107I GGYRCC 3 cut(s) 1048, 1768, 1937
BspTNI GGTCTC 1 cut(s) 1761
BsrDI GCAATG 4 cut(s) 624, 953, 1656, 1686
BsrFI RCCGGY 4 cut(s) 559, 572, 961, 1765
BsrGI TGTACA 1 cut(s) 1669
BsrI ACTGG 1 cut(s) 1299
BssAI RCCGGY 4 cut(s) 559, 572, 961, 1765
BssECI CCNNGG 5 cut(s) 651, 1142, 1472, 1585, 1856
BssMI GATC 6 cut(s) 3, 187, 290, 1251, 1358, 1731
BssSI CACGAG 1 cut(s) 45
BssT1I CCWWGG 2 cut(s) 1142, 1585
Bst2BI CACGAG 1 cut(s) 45
Bst2UI CCWGG 4 cut(s) 101, 192, 1753, 1858
Bst4CI ACNGT 9 cut(s) 568, 799, 841, 1077, 1139, 1177, 1245, 1597, 1773
Bst6I CTCTTC 2 cut(s) 993, 1195
BstAUI TGTACA 1 cut(s) 1669
BstBAI YACGTR 1 cut(s) 874
BstBI TTCGAA 2 cut(s) 925, 1109
BstC8I GCNNGC 4 cut(s) 474, 622, 1746, 1868
BstDEI CTNAG 8 cut(s) 113, 911, 984, 1053, 1364, 1758, 1885, 1928
BstDSI CCRYGG 1 cut(s) 1472
BstF5I GGATG 7 cut(s) 283, 370, 652, 1086, 1174, 1694, 1748
BstH2I RGCGCY 1 cut(s) 606
BstHHI GCGC 2 cut(s) 605, 1872
BstKTI GATC 6 cut(s) 6, 190, 293, 1254, 1361, 1734
BstMAI GTCTC 4 cut(s) 551, 585, 810, 1761
BstMBI GATC 6 cut(s) 3, 187, 290, 1251, 1358, 1731
BstMWI GCNNNNNNNGC 5 cut(s) 105, 569, 626, 1310, 1398
BstNI CCWGG 4 cut(s) 101, 192, 1753, 1858
BstNSI RCATGY 2 cut(s) 923, 1870
BstSCI CCNGG 6 cut(s) 99, 190, 317, 650, 1751, 1856
BstSFI CTRYAG 5 cut(s) 94, 421, 852, 1257, 1399
BstV1I GCAGC 5 cut(s) 435, 463, 616, 883, 1728
BstV2I GAAGAC 2 cut(s) 76, 682
BstX2I RGATCY 2 cut(s) 1358, 1731
BstYI RGATCY 2 cut(s) 1358, 1731
Bsu36I CCTNAGG 2 cut(s) 1885, 1928
BsuRI GGCC 4 cut(s) 572, 663, 1765, 1896
BtgI CCRYGG 1 cut(s) 1472
BtgZI GCGATG 1 cut(s) 1008
BtsCI GGATG 7 cut(s) 283, 370, 652, 1086, 1174, 1694, 1748
BtsI GCAGTG 3 cut(s) 1211, 1232, 1408
BtsIMutI CAGTG 7 cut(s) 268, 1082, 1182, 1211, 1232, 1306, 1408
Cac8I GCNNGC 4 cut(s) 474, 622, 1746, 1868
CfoI GCGC 2 cut(s) 605, 1872
Cfr10I RCCGGY 4 cut(s) 559, 572, 961, 1765
Cfr13I GGNCC 4 cut(s) 661, 1278, 1444, 1700
Csp6I GTAC 6 cut(s) 69, 381, 1049, 1670, 1769, 1774
CspAI ACCGGT 1 cut(s) 961
CspCI CAANNNNNGTGG 2 cut(s) 28, 63
CviAII CATG 3 cut(s) 920, 1605, 1867
CviQI GTAC 6 cut(s) 69, 381, 1049, 1670, 1769, 1774
DdeI CTNAG 8 cut(s) 113, 911, 984, 1053, 1364, 1758, 1885, 1928
DpnI GATC 6 cut(s) 5, 189, 292, 1253, 1360, 1733
DpnII GATC 6 cut(s) 3, 187, 290, 1251, 1358, 1731
DraIII CACNNNGTG 1 cut(s) 1120
EaeI YGGCCR 1 cut(s) 570
Eam1104I CTCTTC 2 cut(s) 993, 1195
EarI CTCTTC 2 cut(s) 993, 1195
EciI GGCGGA 2 cut(s) 44, 749
Ecl136II GAGCTC 2 cut(s) 165, 1531
Eco130I CCWWGG 2 cut(s) 1142, 1585
Eco24I GRGCYC 2 cut(s) 167, 1533
Eco31I GGTCTC 1 cut(s) 1761
Eco47I GGWCC 3 cut(s) 1278, 1444, 1700
Eco53kI GAGCTC 2 cut(s) 165, 1531
Eco81I CCTNAGG 2 cut(s) 1885, 1928
Eco88I CYCGRG 1 cut(s) 593
EcoICRI GAGCTC 2 cut(s) 165, 1531
EcoRII CCWGG 4 cut(s) 99, 190, 1751, 1856
EcoT14I CCWWGG 2 cut(s) 1142, 1585
EcoT22I ATGCAT 1 cut(s) 886
EcoT38I GRGCYC 2 cut(s) 167, 1533
ErhI CCWWGG 2 cut(s) 1142, 1585
FaeI CATG 3 cut(s) 923, 1608, 1870
FalI AAGNNNNNCTT 2 cut(s) 749, 781
FaqI GGGAC 1 cut(s) 727
FatI CATG 3 cut(s) 919, 1604, 1866
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 6 cut(s) 424, 477, 507, 630, 897, 1742
FokI GGATG 7 cut(s) 290, 357, 659, 1093, 1181, 1701, 1735
FriOI GRGCYC 2 cut(s) 167, 1533
Fsp4HI GCNGC 6 cut(s) 424, 477, 507, 630, 897, 1742
FspBI CTAG 2 cut(s) 473, 1934
GlaI GCGC 2 cut(s) 604, 1871
GluI GCNGC 6 cut(s) 424, 477, 507, 630, 897, 1742
GsuI CTGGAG 2 cut(s) 551, 1238
HaeII RGCGCY 1 cut(s) 606
HaeIII GGCC 4 cut(s) 572, 663, 1765, 1896
HhaI GCGC 2 cut(s) 605, 1872
Hin1II CATG 3 cut(s) 923, 1608, 1870
Hin6I GCGC 2 cut(s) 603, 1870
HinP1I GCGC 2 cut(s) 603, 1870
HincII GTYRAC 2 cut(s) 1230, 1248
HindII GTYRAC 2 cut(s) 1230, 1248
HindIII AAGCTT 1 cut(s) 536
HinfI GANTC 6 cut(s) 544, 1004, 1028, 1034, 1111, 1222
HphI GGTGA 2 cut(s) 842, 1634
Hpy166II GTNNAC 4 cut(s) 381, 1230, 1248, 1670
Hpy188III TCNNGA 9 cut(s) 361, 374, 530, 550, 595, 608, 865, 1115, 1686
Hpy8I GTNNAC 4 cut(s) 381, 1230, 1248, 1670
Hpy99I CGWCG 2 cut(s) 250, 1538
HpyAV CCTTC 5 cut(s) 132, 150, 329, 1117, 1174
HpyCH4III ACNGT 9 cut(s) 568, 799, 841, 1077, 1139, 1177, 1245, 1597, 1773
HpyCH4IV ACGT 2 cut(s) 873, 1638
HpyF10VI GCNNNNNNNGC 5 cut(s) 105, 569, 626, 1310, 1398
HpyF3I CTNAG 8 cut(s) 113, 911, 984, 1053, 1364, 1758, 1885, 1928
HpySE526I ACGT 2 cut(s) 873, 1638
Hsp92II CATG 3 cut(s) 923, 1608, 1870
HspAI GCGC 2 cut(s) 603, 1870
KpnI GGTACC 2 cut(s) 1052, 1772
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 6 cut(s) 3, 187, 290, 1251, 1358, 1731
LmnI GCTCC 8 cut(s) 162, 170, 345, 610, 683, 1026, 1062, 1318
Lsp1109I GCAGC 5 cut(s) 435, 463, 616, 883, 1728
LweI GCATC 4 cut(s) 637, 931, 1509, 1757
MaeI CTAG 2 cut(s) 473, 1934
MaeII ACGT 2 cut(s) 873, 1638
MaeIII GTNAC 4 cut(s) 694, 835, 946, 1839
MalI GATC 6 cut(s) 5, 189, 292, 1253, 1360, 1733
MboI GATC 6 cut(s) 3, 187, 290, 1251, 1358, 1731
MboII GAAGA 7 cut(s) 76, 140, 682, 1010, 1182, 1313, 1361
MflI RGATCY 2 cut(s) 1358, 1731
MhlI GDGCHC 2 cut(s) 167, 1533
MlyI GAGTC 2 cut(s) 553, 1037
MmeI TCCRAC 3 cut(s) 255, 1139, 1336
Mph1103I ATGCAT 1 cut(s) 886
MroXI GAANNNNTTC 1 cut(s) 121
MseI TTAA 6 cut(s) 267, 666, 815, 1628, 1710, 1875
MspA1I CMGCKG 1 cut(s) 426
MspR9I CCNGG 6 cut(s) 101, 192, 319, 652, 1753, 1858
Mva1269I GAATGC 1 cut(s) 1416
MvaI CCWGG 4 cut(s) 101, 192, 1753, 1858
MwoI GCNNNNNNNGC 5 cut(s) 105, 569, 626, 1310, 1398
NciI CCSGG 2 cut(s) 319, 652
NdeII GATC 6 cut(s) 3, 187, 290, 1251, 1358, 1731
NheI GCTAGC 1 cut(s) 472
NlaIII CATG 3 cut(s) 923, 1608, 1870
NlaIV GGNNCC 4 cut(s) 136, 1050, 1770, 1939
NmuCI GTSAC 1 cut(s) 1839
NsiI ATGCAT 1 cut(s) 886
NspI RCATGY 2 cut(s) 923, 1870
NspV TTCGAA 2 cut(s) 925, 1109
PaeI GCATGC 1 cut(s) 1870
PciI ACATGT 1 cut(s) 919
PcsI WCGNNNNNNNCGW 1 cut(s) 900
PctI GAATGC 1 cut(s) 1416
PdmI GAANNNNTTC 1 cut(s) 121
PfeI GAWTC 4 cut(s) 1004, 1034, 1111, 1222
PinAI ACCGGT 1 cut(s) 961
PkrI GCNGC 6 cut(s) 425, 478, 508, 631, 898, 1743
PleI GAGTC 2 cut(s) 552, 1036
PpsI GAGTC 2 cut(s) 552, 1036
Ppu21I YACGTR 1 cut(s) 874
PscI ACATGT 1 cut(s) 919
Psp124BI GAGCTC 2 cut(s) 167, 1533
Psp1406I AACGTT 1 cut(s) 1638
Psp6I CCWGG 4 cut(s) 99, 190, 1751, 1856
PspGI CCWGG 4 cut(s) 99, 190, 1751, 1856
PspN4I GGNNCC 4 cut(s) 136, 1050, 1770, 1939
PspPI GGNCC 4 cut(s) 661, 1278, 1444, 1700
PstI CTGCAG 2 cut(s) 425, 1403
PsuI RGATCY 2 cut(s) 1358, 1731
PvuII CAGCTG 1 cut(s) 426
RsaI GTAC 6 cut(s) 70, 382, 1050, 1671, 1770, 1775
RsaNI GTAC 6 cut(s) 69, 381, 1049, 1670, 1769, 1774
SacI GAGCTC 2 cut(s) 167, 1533
SaqAI TTAA 6 cut(s) 267, 666, 815, 1628, 1710, 1875
SatI GCNGC 6 cut(s) 424, 477, 507, 630, 897, 1742
Sau3AI GATC 6 cut(s) 3, 187, 290, 1251, 1358, 1731
Sau96I GGNCC 4 cut(s) 661, 1278, 1444, 1700
SchI GAGTC 2 cut(s) 553, 1037
ScrFI CCNGG 6 cut(s) 101, 192, 319, 652, 1753, 1858
SduI GDGCHC 2 cut(s) 167, 1533
SfaNI GCATC 4 cut(s) 637, 931, 1509, 1757
SfcI CTRYAG 5 cut(s) 94, 421, 852, 1257, 1399
SfuI TTCGAA 2 cut(s) 925, 1109
SinI GGWCC 3 cut(s) 1278, 1444, 1700
SmlI CTYRAG 1 cut(s) 1025
SmoI CTYRAG 1 cut(s) 1025
SphI GCATGC 1 cut(s) 1870
SsiI CCGC 3 cut(s) 29, 506, 734
SspMI CTAG 2 cut(s) 473, 1934
SstI GAGCTC 2 cut(s) 167, 1533
StyD4I CCNGG 6 cut(s) 99, 190, 317, 650, 1751, 1856
StyI CCWWGG 2 cut(s) 1142, 1585
TaaI ACNGT 9 cut(s) 568, 799, 841, 1077, 1139, 1177, 1245, 1597, 1773
TaiI ACGT 2 cut(s) 876, 1641
TaqI TCGA 7 cut(s) 157, 248, 542, 925, 1109, 1263, 1429
TatI WGTACW 3 cut(s) 68, 380, 1669
TauI GCSGC 1 cut(s) 509
TfiI GAWTC 4 cut(s) 1004, 1034, 1111, 1222
Tru1I TTAA 6 cut(s) 267, 666, 815, 1628, 1710, 1875
Tru9I TTAA 6 cut(s) 267, 666, 815, 1628, 1710, 1875
TscAI CASTG 7 cut(s) 268, 1082, 1182, 1218, 1239, 1306, 1408
TseFI GTSAC 1 cut(s) 1839
TseI GCWGC 5 cut(s) 423, 476, 629, 896, 1741
Tsp45I GTSAC 1 cut(s) 1839
TspDTI ATGAA 4 cut(s) 398, 1011, 1185, 1667
TspGWI ACGGA 3 cut(s) 234, 1215, 1461
TspRI CASTG 7 cut(s) 268, 1082, 1182, 1218, 1239, 1306, 1408
VpaK11BI GGWCC 3 cut(s) 1278, 1444, 1700
XapI RAATTY 4 cut(s) 34, 63, 1460, 1779
XceI RCATGY 2 cut(s) 923, 1870
XcmI CCANNNNNNNNNTGG 2 cut(s) 1080, 1149
XmnI GAANNNNTTC 1 cut(s) 121
XspI CTAG 2 cut(s) 473, 1934
Zsp2I ATGCAT 1 cut(s) 886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.