Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G54115 AT3G14070 |
| fragaria_vesca | FvH4_1g08880 |
| malus_domestica | MD02G1094200.v1.1 MD15G1219100.v1.1 |
| prunus_persica | Prupe.7G196800_v2.0.a1 |
| pyrus_communis | pycom02g07420 pycom15g19420 |
| rosa_chinensis | RchiOBHm_Chr2g0095341 |
| rosa_laevigata | RLG00000016556 |
| rosa_multiflora | Rmu_ssc0000183.1_g000034 |
| rosa_roxburghii | Rroxscaffold_2G00146460 |
| rosa_rugosa | Rorug02G0049800 |
| rosa_samantha | Rh2AG097900 Rh2BG099100 Rh2CG101200 Rh2DG098800 |
| rosa_wichuraiana | Rw2G007390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1779, 1904 |
| AccII | CGCG | 1 cut(s) | 512 |
| AccIII | TCCGGA | 1 cut(s) | 610 |
| AclWI | GGATC | 2 cut(s) | 299, 1369 |
| AcsI | RAATTY | 4 cut(s) | 42, 139, 556, 1463 |
| AcuI | CTGAAG | 1 cut(s) | 1056 |
| AdeI | CACNNNGTG | 1 cut(s) | 1559 |
| AfaI | GTAC | 4 cut(s) | 362, 422, 1135, 1674 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 127, 128, 217, 971 |
| AflIII | ACRYGT | 1 cut(s) | 922 |
| AgsI | TTSAA | 8 cut(s) | 58, 556, 1031, 1095, 1113, 1204, 1349, 1714 |
| AjiI | CACGTC | 2 cut(s) | 661, 1051 |
| AjnI | CCWGG | 4 cut(s) | 222, 388, 1754, 1859 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 662, 694 |
| Alw21I | GWGCWC | 4 cut(s) | 73, 167, 320, 610 |
| Alw26I | GTCTC | 3 cut(s) | 588, 1405, 1759 |
| Alw44I | GTGCAC | 1 cut(s) | 316 |
| AlwI | GGATC | 2 cut(s) | 299, 1369 |
| Aor13HI | TCCGGA | 1 cut(s) | 610 |
| AoxI | GGCC | 3 cut(s) | 219, 1703, 1897 |
| ApaLI | GTGCAC | 1 cut(s) | 316 |
| ApeKI | GCWGC | 7 cut(s) | 299, 479, 632, 899, 1072, 1237, 1855 |
| ApoI | RAATTY | 4 cut(s) | 42, 139, 556, 1463 |
| AseI | ATTAAT | 1 cut(s) | 1656 |
| AspLEI | GCGC | 1 cut(s) | 1875 |
| AspS9I | GGNCC | 4 cut(s) | 8, 220, 1281, 1703 |
| AsuC2I | CCSGG | 1 cut(s) | 377 |
| AsuHPI | GGTGA | 3 cut(s) | 1049, 1637, 1676 |
| AsuII | TTCGAA | 3 cut(s) | 137, 248, 928 |
| AvaII | GGWCC | 2 cut(s) | 8, 1281 |
| BaeGI | GKGCMC | 2 cut(s) | 320, 399 |
| BanII | GRGCYC | 1 cut(s) | 167 |
| Bbv12I | GWGCWC | 4 cut(s) | 73, 167, 320, 610 |
| BbvI | GCAGC | 7 cut(s) | 286, 466, 619, 886, 1059, 1224, 1842 |
| BccI | CCATC | 4 cut(s) | 98, 1272, 1588, 1615 |
| BceAI | ACGGC | 1 cut(s) | 312 |
| BciT130I | CCWGG | 4 cut(s) | 224, 390, 1756, 1861 |
| BcnI | CCSGG | 1 cut(s) | 377 |
| BcoDI | GTCTC | 3 cut(s) | 588, 1405, 1759 |
| BfaI | CTAG | 4 cut(s) | 30, 1365, 1535, 1823 |
| BfmI | CTRYAG | 2 cut(s) | 855, 1220 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 572 |
| BglII | AGATCT | 1 cut(s) | 1884 |
| BmcAI | AGTACT | 1 cut(s) | 362 |
| Bme1390I | CCNGG | 5 cut(s) | 224, 377, 390, 1756, 1861 |
| Bme18I | GGWCC | 2 cut(s) | 8, 1281 |
| BmgBI | CACGTC | 2 cut(s) | 661, 1051 |
| BmgT120I | GGNCC | 4 cut(s) | 8, 220, 1281, 1703 |
| BmiI | GGNNCC | 2 cut(s) | 10, 1317 |
| BmrFI | CCNGG | 5 cut(s) | 224, 377, 390, 1756, 1861 |
| BmrI | ACTGGG | 3 cut(s) | 6, 330, 1565 |
| BmsI | GCATC | 6 cut(s) | 166, 271, 640, 1682, 1781, 1952 |
| BmuI | ACTGGG | 3 cut(s) | 6, 330, 1565 |
| BpmI | CTGGAG | 2 cut(s) | 181, 554 |
| Bpu14I | TTCGAA | 3 cut(s) | 137, 248, 928 |
| BpuMI | CCSGG | 1 cut(s) | 377 |
| BsaI | GGTCTC | 1 cut(s) | 1759 |
| BsaJI | CCNNGG | 6 cut(s) | 222, 337, 510, 1145, 1475, 1859 |
| BsaWI | WCCGGW | 2 cut(s) | 610, 964 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 127, 128, 217, 971 |
| Bse1I | ACTGG | 5 cut(s) | 12, 325, 1551, 1560, 1653 |
| Bse3DI | GCAATG | 4 cut(s) | 627, 956, 1189, 1689 |
| BseAI | TCCGGA | 1 cut(s) | 610 |
| BseBI | CCWGG | 4 cut(s) | 224, 390, 1756, 1861 |
| BseDI | CCNNGG | 6 cut(s) | 222, 337, 510, 1145, 1475, 1859 |
| BseGI | GGATG | 6 cut(s) | 619, 655, 949, 1009, 1089, 1697 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 127, 128, 217, 971 |
| BseMI | GCAATG | 4 cut(s) | 627, 956, 1189, 1689 |
| BseMII | CTCAG | 1 cut(s) | 1945 |
| BseNI | ACTGG | 5 cut(s) | 12, 325, 1551, 1560, 1653 |
| BseRI | GAGGAG | 3 cut(s) | 1013, 1283, 1446 |
| BseSI | GKGCMC | 2 cut(s) | 320, 399 |
| BseXI | GCAGC | 7 cut(s) | 286, 466, 619, 886, 1059, 1224, 1842 |
| BseYI | CCCAGC | 2 cut(s) | 1019, 1700 |
| Bsh1236I | CGCG | 1 cut(s) | 512 |
| BshFI | GGCC | 3 cut(s) | 221, 1705, 1899 |
| BsiHKAI | GWGCWC | 4 cut(s) | 73, 167, 320, 610 |
| BsiSI | CCGG | 4 cut(s) | 211, 377, 611, 965 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 127, 128, 217, 971 |
| BsmAI | GTCTC | 3 cut(s) | 588, 1405, 1759 |
| BsmI | GAATGC | 1 cut(s) | 1344 |
| BsnI | GGCC | 3 cut(s) | 221, 1705, 1899 |
| Bso31I | GGTCTC | 1 cut(s) | 1759 |
| Bsp119I | TTCGAA | 3 cut(s) | 137, 248, 928 |
| Bsp1286I | GDGCHC | 5 cut(s) | 73, 167, 320, 399, 610 |
| Bsp13I | TCCGGA | 1 cut(s) | 610 |
| Bsp1407I | TGTACA | 1 cut(s) | 1672 |
| Bsp143I | GATC | 4 cut(s) | 304, 1361, 1627, 1884 |
| Bsp19I | CCATGG | 2 cut(s) | 337, 1475 |
| BspANI | GGCC | 3 cut(s) | 221, 1705, 1899 |
| BspCNI | CTCAG | 1 cut(s) | 1944 |
| BspEI | TCCGGA | 1 cut(s) | 610 |
| BspFNI | CGCG | 1 cut(s) | 512 |
| BspHI | TCATGA | 1 cut(s) | 1497 |
| BspLI | GGNNCC | 2 cut(s) | 10, 1317 |
| BspPI | GGATC | 2 cut(s) | 299, 1369 |
| BspT104I | TTCGAA | 3 cut(s) | 137, 248, 928 |
| BspTNI | GGTCTC | 1 cut(s) | 1759 |
| BsrDI | GCAATG | 4 cut(s) | 627, 956, 1189, 1689 |
| BsrGI | TGTACA | 1 cut(s) | 1672 |
| BsrI | ACTGG | 5 cut(s) | 12, 325, 1551, 1560, 1653 |
| BssECI | CCNNGG | 6 cut(s) | 222, 337, 510, 1145, 1475, 1859 |
| BssMI | GATC | 4 cut(s) | 304, 1361, 1627, 1884 |
| BssT1I | CCWWGG | 3 cut(s) | 337, 1145, 1475 |
| Bst2UI | CCWGG | 4 cut(s) | 224, 390, 1756, 1861 |
| Bst4CI | ACNGT | 7 cut(s) | 425, 431, 571, 844, 1600, 1670, 1959 |
| Bst6I | CTCTTC | 3 cut(s) | 1032, 1164, 1198 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 68 |
| BstAUI | TGTACA | 1 cut(s) | 1672 |
| BstBI | TTCGAA | 3 cut(s) | 137, 248, 928 |
| BstC8I | GCNNGC | 6 cut(s) | 395, 530, 564, 625, 655, 1726 |
| BstDEI | CTNAG | 3 cut(s) | 1761, 1888, 1931 |
| BstDSI | CCRYGG | 3 cut(s) | 337, 510, 1475 |
| BstF5I | GGATG | 6 cut(s) | 619, 655, 949, 1009, 1089, 1697 |
| BstFNI | CGCG | 1 cut(s) | 512 |
| BstHHI | GCGC | 1 cut(s) | 1875 |
| BstKTI | GATC | 4 cut(s) | 307, 1364, 1630, 1887 |
| BstMAI | GTCTC | 3 cut(s) | 588, 1405, 1759 |
| BstMBI | GATC | 4 cut(s) | 304, 1361, 1627, 1884 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 59, 68, 538, 572, 629, 1313 |
| BstNI | CCWGG | 4 cut(s) | 224, 390, 1756, 1861 |
| BstNSI | RCATGY | 2 cut(s) | 926, 1873 |
| BstSCI | CCNGG | 5 cut(s) | 222, 375, 388, 1754, 1859 |
| BstSFI | CTRYAG | 2 cut(s) | 855, 1220 |
| BstSLI | GKGCMC | 2 cut(s) | 320, 399 |
| BstUI | CGCG | 1 cut(s) | 512 |
| BstV1I | GCAGC | 7 cut(s) | 286, 466, 619, 886, 1059, 1224, 1842 |
| BstX2I | RGATCY | 2 cut(s) | 1361, 1884 |
| BstYI | RGATCY | 2 cut(s) | 1361, 1884 |
| BsuRI | GGCC | 3 cut(s) | 221, 1705, 1899 |
| BtgI | CCRYGG | 3 cut(s) | 337, 510, 1475 |
| BtgZI | GCGATG | 1 cut(s) | 830 |
| BtrI | CACGTC | 2 cut(s) | 661, 1051 |
| BtsCI | GGATG | 6 cut(s) | 619, 655, 949, 1009, 1089, 1697 |
| BtsI | GCAGTG | 1 cut(s) | 1085 |
| BtsIMutI | CAGTG | 7 cut(s) | 318, 567, 1085, 1221, 1553, 1646, 1844 |
| Cac8I | GCNNGC | 6 cut(s) | 395, 530, 564, 625, 655, 1726 |
| CciI | TCATGA | 1 cut(s) | 1497 |
| CfoI | GCGC | 1 cut(s) | 1875 |
| Cfr13I | GGNCC | 4 cut(s) | 8, 220, 1281, 1703 |
| Cfr42I | CCGCGG | 1 cut(s) | 513 |
| CseI | GACGC | 1 cut(s) | 1243 |
| Csp6I | GTAC | 4 cut(s) | 361, 421, 1134, 1673 |
| CviAII | CATG | 5 cut(s) | 338, 923, 1476, 1498, 1870 |
| CviQI | GTAC | 4 cut(s) | 361, 421, 1134, 1673 |
| DdeI | CTNAG | 3 cut(s) | 1761, 1888, 1931 |
| DpnI | GATC | 4 cut(s) | 306, 1363, 1629, 1886 |
| DpnII | GATC | 4 cut(s) | 304, 1361, 1627, 1884 |
| DraIII | CACNNNGTG | 1 cut(s) | 1559 |
| Eam1104I | CTCTTC | 3 cut(s) | 1032, 1164, 1198 |
| EarI | CTCTTC | 3 cut(s) | 1032, 1164, 1198 |
| EciI | GGCGGA | 1 cut(s) | 752 |
| Ecl136II | GAGCTC | 1 cut(s) | 165 |
| Eco130I | CCWWGG | 3 cut(s) | 337, 1145, 1475 |
| Eco24I | GRGCYC | 1 cut(s) | 167 |
| Eco31I | GGTCTC | 1 cut(s) | 1759 |
| Eco47I | GGWCC | 2 cut(s) | 8, 1281 |
| Eco53kI | GAGCTC | 1 cut(s) | 165 |
| Eco57I | CTGAAG | 1 cut(s) | 1056 |
| EcoICRI | GAGCTC | 1 cut(s) | 165 |
| EcoO109I | RGGNCCY | 1 cut(s) | 8 |
| EcoRI | GAATTC | 2 cut(s) | 42, 139 |
| EcoRII | CCWGG | 4 cut(s) | 222, 388, 1754, 1859 |
| EcoT14I | CCWWGG | 3 cut(s) | 337, 1145, 1475 |
| EcoT38I | GRGCYC | 1 cut(s) | 167 |
| ErhI | CCWWGG | 3 cut(s) | 337, 1145, 1475 |
| FaeI | CATG | 5 cut(s) | 341, 926, 1479, 1501, 1873 |
| FatI | CATG | 5 cut(s) | 337, 922, 1475, 1497, 1869 |
| FauI | CCCGC | 5 cut(s) | 386, 568, 571, 646, 1777 |
| FokI | GGATG | 6 cut(s) | 626, 662, 956, 1016, 1096, 1704 |
| FriOI | GRGCYC | 1 cut(s) | 167 |
| FspBI | CTAG | 4 cut(s) | 30, 1365, 1535, 1823 |
| GlaI | GCGC | 1 cut(s) | 1874 |
| GsaI | CCCAGC | 2 cut(s) | 1023, 1704 |
| GsuI | CTGGAG | 2 cut(s) | 181, 554 |
| HaeIII | GGCC | 3 cut(s) | 221, 1705, 1899 |
| HapII | CCGG | 4 cut(s) | 211, 377, 611, 965 |
| HgaI | GACGC | 1 cut(s) | 1243 |
| HhaI | GCGC | 1 cut(s) | 1875 |
| Hin1II | CATG | 5 cut(s) | 341, 926, 1479, 1501, 1873 |
| Hin6I | GCGC | 1 cut(s) | 1873 |
| HinP1I | GCGC | 1 cut(s) | 1873 |
| HindIII | AAGCTT | 1 cut(s) | 539 |
| HinfI | GANTC | 5 cut(s) | 250, 547, 1007, 1031, 1818 |
| HpaII | CCGG | 4 cut(s) | 211, 377, 611, 965 |
| HphI | GGTGA | 3 cut(s) | 1049, 1637, 1676 |
| Hpy166II | GTNNAC | 3 cut(s) | 318, 330, 1673 |
| Hpy188I | TCNGA | 7 cut(s) | 255, 280, 776, 1036, 1119, 1592, 1934 |
| Hpy188III | TCNNGA | 7 cut(s) | 30, 160, 199, 611, 1349, 1498, 1689 |
| Hpy8I | GTNNAC | 3 cut(s) | 318, 330, 1673 |
| Hpy99I | CGWCG | 1 cut(s) | 662 |
| HpyAV | CCTTC | 2 cut(s) | 640, 829 |
| HpyCH4III | ACNGT | 7 cut(s) | 425, 431, 571, 844, 1600, 1670, 1959 |
| HpyCH4IV | ACGT | 2 cut(s) | 660, 1050 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 59, 68, 538, 572, 629, 1313 |
| HpyF3I | CTNAG | 3 cut(s) | 1761, 1888, 1931 |
| HpySE526I | ACGT | 2 cut(s) | 660, 1050 |
| Hsp92II | CATG | 5 cut(s) | 341, 926, 1479, 1501, 1873 |
| HspAI | GCGC | 1 cut(s) | 1873 |
| Kpn2I | TCCGGA | 1 cut(s) | 610 |
| KspI | CCGCGG | 1 cut(s) | 513 |
| Kzo9I | GATC | 4 cut(s) | 304, 1361, 1627, 1884 |
| LmnI | GCTCC | 7 cut(s) | 162, 170, 435, 613, 686, 1321, 1341 |
| Lsp1109I | GCAGC | 7 cut(s) | 286, 466, 619, 886, 1059, 1224, 1842 |
| LweI | GCATC | 6 cut(s) | 166, 271, 640, 1682, 1781, 1952 |
| MaeI | CTAG | 4 cut(s) | 30, 1365, 1535, 1823 |
| MaeII | ACGT | 2 cut(s) | 660, 1050 |
| MaeIII | GTNAC | 9 cut(s) | 14, 292, 425, 697, 838, 949, 1046, 1664, 1842 |
| MalI | GATC | 4 cut(s) | 306, 1363, 1629, 1886 |
| MboI | GATC | 4 cut(s) | 304, 1361, 1627, 1884 |
| MboII | GAAGA | 8 cut(s) | 76, 140, 796, 1049, 1181, 1185, 1316, 1387 |
| MflI | RGATCY | 2 cut(s) | 1361, 1884 |
| MhlI | GDGCHC | 5 cut(s) | 73, 167, 320, 399, 610 |
| MlyI | GAGTC | 1 cut(s) | 556 |
| MmeI | TCCRAC | 2 cut(s) | 921, 1142 |
| MroI | TCCGGA | 1 cut(s) | 610 |
| MseI | TTAA | 6 cut(s) | 270, 402, 411, 441, 935, 1656 |
| MspA1I | CMGCKG | 1 cut(s) | 512 |
| MspI | CCGG | 4 cut(s) | 211, 377, 611, 965 |
| MspR9I | CCNGG | 5 cut(s) | 224, 377, 390, 1756, 1861 |
| Mva1269I | GAATGC | 1 cut(s) | 1344 |
| MvaI | CCWGG | 4 cut(s) | 224, 390, 1756, 1861 |
| MvnI | CGCG | 1 cut(s) | 512 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 59, 68, 538, 572, 629, 1313 |
| NciI | CCSGG | 1 cut(s) | 377 |
| NcoI | CCATGG | 2 cut(s) | 337, 1475 |
| NdeII | GATC | 4 cut(s) | 304, 1361, 1627, 1884 |
| NlaIII | CATG | 5 cut(s) | 341, 926, 1479, 1501, 1873 |
| NlaIV | GGNNCC | 2 cut(s) | 10, 1317 |
| NmuCI | GTSAC | 4 cut(s) | 425, 1046, 1664, 1842 |
| NspI | RCATGY | 2 cut(s) | 926, 1873 |
| NspV | TTCGAA | 3 cut(s) | 137, 248, 928 |
| PagI | TCATGA | 1 cut(s) | 1497 |
| PciI | ACATGT | 1 cut(s) | 922 |
| PctI | GAATGC | 1 cut(s) | 1344 |
| PfeI | GAWTC | 4 cut(s) | 250, 1007, 1031, 1818 |
| PleI | GAGTC | 1 cut(s) | 555 |
| PpsI | GAGTC | 1 cut(s) | 555 |
| PpuMI | RGGWCCY | 1 cut(s) | 8 |
| PscI | ACATGT | 1 cut(s) | 922 |
| PshBI | ATTAAT | 1 cut(s) | 1656 |
| PsiI | TTATAA | 2 cut(s) | 1779, 1904 |
| Psp124BI | GAGCTC | 1 cut(s) | 167 |
| Psp5II | RGGWCCY | 1 cut(s) | 8 |
| Psp6I | CCWGG | 4 cut(s) | 222, 388, 1754, 1859 |
| PspFI | CCCAGC | 2 cut(s) | 1019, 1700 |
| PspGI | CCWGG | 4 cut(s) | 222, 388, 1754, 1859 |
| PspN4I | GGNNCC | 2 cut(s) | 10, 1317 |
| PspPI | GGNCC | 4 cut(s) | 8, 220, 1281, 1703 |
| PspPPI | RGGWCCY | 1 cut(s) | 8 |
| PsuI | RGATCY | 2 cut(s) | 1361, 1884 |
| RsaI | GTAC | 4 cut(s) | 362, 422, 1135, 1674 |
| RsaNI | GTAC | 4 cut(s) | 361, 421, 1134, 1673 |
| SacI | GAGCTC | 1 cut(s) | 167 |
| SacII | CCGCGG | 1 cut(s) | 513 |
| SaqAI | TTAA | 6 cut(s) | 270, 402, 411, 441, 935, 1656 |
| Sau3AI | GATC | 4 cut(s) | 304, 1361, 1627, 1884 |
| Sau96I | GGNCC | 4 cut(s) | 8, 220, 1281, 1703 |
| ScaI | AGTACT | 1 cut(s) | 362 |
| SchI | GAGTC | 1 cut(s) | 556 |
| ScrFI | CCNGG | 5 cut(s) | 224, 377, 390, 1756, 1861 |
| SduI | GDGCHC | 5 cut(s) | 73, 167, 320, 399, 610 |
| SfaNI | GCATC | 6 cut(s) | 166, 271, 640, 1682, 1781, 1952 |
| SfcI | CTRYAG | 2 cut(s) | 855, 1220 |
| Sfr303I | CCGCGG | 1 cut(s) | 513 |
| SfuI | TTCGAA | 3 cut(s) | 137, 248, 928 |
| SgrBI | CCGCGG | 1 cut(s) | 513 |
| SinI | GGWCC | 2 cut(s) | 8, 1281 |
| SspMI | CTAG | 4 cut(s) | 30, 1365, 1535, 1823 |
| SstI | GAGCTC | 1 cut(s) | 167 |
| StyD4I | CCNGG | 5 cut(s) | 222, 375, 388, 1754, 1859 |
| StyI | CCWWGG | 3 cut(s) | 337, 1145, 1475 |
| TaaI | ACNGT | 7 cut(s) | 425, 431, 571, 844, 1600, 1670, 1959 |
| TaiI | ACGT | 2 cut(s) | 663, 1053 |
| TaqI | TCGA | 8 cut(s) | 137, 198, 248, 545, 756, 928, 1619, 1637 |
| TatI | WGTACW | 4 cut(s) | 360, 420, 1133, 1672 |
| TauI | GCSGC | 4 cut(s) | 512, 1078, 1754, 1943 |
| TfiI | GAWTC | 4 cut(s) | 250, 1007, 1031, 1818 |
| Tru1I | TTAA | 6 cut(s) | 270, 402, 411, 441, 935, 1656 |
| Tru9I | TTAA | 6 cut(s) | 270, 402, 411, 441, 935, 1656 |
| TscAI | CASTG | 7 cut(s) | 325, 574, 1085, 1221, 1560, 1653, 1851 |
| TseFI | GTSAC | 4 cut(s) | 425, 1046, 1664, 1842 |
| TseI | GCWGC | 7 cut(s) | 299, 479, 632, 899, 1072, 1237, 1855 |
| Tsp45I | GTSAC | 4 cut(s) | 425, 1046, 1664, 1842 |
| TspDTI | ATGAA | 3 cut(s) | 100, 1200, 1486 |
| TspRI | CASTG | 7 cut(s) | 325, 574, 1085, 1221, 1560, 1653, 1851 |
| VneI | GTGCAC | 1 cut(s) | 316 |
| VpaK11BI | GGWCC | 2 cut(s) | 8, 1281 |
| VspI | ATTAAT | 1 cut(s) | 1656 |
| XapI | RAATTY | 4 cut(s) | 42, 139, 556, 1463 |
| XbaI | TCTAGA | 1 cut(s) | 29 |
| XceI | RCATGY | 2 cut(s) | 926, 1873 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1152 |
| XspI | CTAG | 4 cut(s) | 30, 1365, 1535, 1823 |
| ZrmI | AGTACT | 1 cut(s) | 362 |