MD02G1094200.v1.1

Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0013551
Physical Location & Seq
Reverse (-)
7479499 .. 7481507
2009 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1094200.v1.1.491

Sequence Viewer

Length: 1962 bp
ATGATTAAACCCAAGTGGTTTTTGGGGGAGAAAAATTCCCAATTTCGTGGGCTTTTCAATGGAATTTGTACTTTGGTATTGGTCTTCTTGTTCTACAGCCAGGACAGTTTTCTAAGAAACCCTTTTCTGGGTAGCTCGCATTCGGTTCTTCCTCCTCGATGGAGCTCCAAAGTCAATGGATTTGGCGATCCGGGTAGTCGGGTTGATATTATTCGCAGGAGAATGGCCGAAATTGATGTTTCTCCTTCGAATTATAGTGTCAGTGTTAATGAGTCGGATGCCAAATCGTTATCAGAACCTAATCCCGAATTATGCATCGGGTTGTTCAAACACGAAGGTTATGGGAGCAAATGTGAGTTCTTGATCGCCCATCCGGAGTGCACTTCCGGTGGTTATTTTAATTACATTCATTTCTTTTACTGCACCTGTGAGAAAGTTAGCATTTTGGGGTATGTAGTGTTGGCAATATGGTTAGCTGCTTTGTTCTATCTATTGGGCAATACCGCCGCAGATTATTTTTGTTGTTCTCTGGAGAAGCTGTCGAGTCTCTTGAAGCTACCGGCGACTGTGGCCGGTGTGTCTCTGCTTCCGCTCGGGAATGGTGCTCCTGATGTGTTTGCCAGCATTGCTGCTTTTGTGGGTAAGGATACCGGGGGAGTTGGTCTTAATAGTGTGTTGGGTGGAGCTGTCTTTGTTACTTGTATTGTTGTCGGGACTATATCCCTATGCGTGGCGGACAAGGGGTTTCAGATTGATAAGAAATGCTTTATCAGAGATATATGTTTTTTCCTCTTTACTGTTATGTCTCTTGCCTTAATGTTGATGGTCGGTGAGGTTACTGTCGGGGGTGCTATAGCGTTTGTCTTGATTTATGTGGTTTATGCGTTTGTGGTCGCTGCAAACGAGCTTCTGAGGAAACATGTTCGGAAATTGAAGTTGGATGCTGTAACACCGTTGCTACCGGTCAGGGGAAGTATATTTTCTCAGGGACGCGACGAGGAGGAATCTGTATATGCTTCGCTCCTTGAGTCTGAATCAGACAGTGAGGTACCTCATCTCCTAAGTAAGTTGCCACAGTGGATGTGGGCATCAAATGTGGCAATTTATTCGAATCAGAATGTGAAGGCTTGTTCAGACAGTCCAAGGTCATTGTGGGGTTGGAACGAGGATGAAACAGTGAAGGAAAACTCTTCCTCTTTTAGATTTTTATCACTGCTGGAAATTCCGTTGACGCTGCCAAGACGGTTGACAATCCCTATAGTCGAGGAGGATAGGTGGTCCAAAGGTTATGCTGTTGCCAGTGCTGTACTAGCTCCCATTCTTCTGTTATTTTTATGGAACACCCAAGAAGATGTTGGATCTCTGAGTAAGGAAATTGCCTACTTTATAGGCTTTCCCTGCAGTGGTGTCTTTGGTATTCTTGCATATCTACACACAAGACCGGACCAGCCCCCTCAGAAATTTTTATTTCCATGGGTTTTAGGAGGGTTTTTTATGAGCATCATCTGGTTCTACGTTCTTGCAAATGAGCTGGTCGGGTTGCTGGTGGCGTTTGGCGTAATTTTTGGAGTAAATCCATCAATCCTTGGATTGACTGTATTAGCATGGGGCAACTCAATGGGTGATTTAATGTCGAACACTGCATTGGCAATGAATGGTGCAGATGGTGTACAAATTGCAATGTCAGGATGTTATGCCGGGCCTATGTTTAACACACTTGCTGGTTTGGGGATCTCAATGGTCCTTGCATCCTGGTCTCAGAGACCGAAACCATACAAAATTCCCAAAGACAATAGCCTGTTTTATACAATGGGATTTCTAATATCAGGGCTTCTTTGGTCACTTGCTGTGCTACCGAGGAGTGGCATGCGCCCTAACAAGACCTTAGGACTCGGCCTCATAACCATCTATCTGGTATTTCTCTCCCTTAGGCTAGGCACGTCAATGGGTTTATTGTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0051179 GO:0051234
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Na_Ca_ex

Protein Analysis

654

Amino Acids

71.57

Weight (kDa)

7.01

Isoelectric Point (pI)

38.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_Ca_ex PF01699 155 - 298 2e-23 Sodium/calcium exchanger protein
Na_Ca_ex PF01699 493 - 644 1.9e-28 Sodium/calcium exchanger protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013551)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G54115 AT3G14070
fragaria_vesca FvH4_1g08880
malus_domestica MD02G1094200.v1.1 MD15G1219100.v1.1
prunus_persica Prupe.7G196800_v2.0.a1
pyrus_communis pycom02g07420 pycom15g19420
rosa_chinensis RchiOBHm_Chr2g0095341
rosa_laevigata RLG00000016556
rosa_multiflora Rmu_ssc0000183.1_g000034
rosa_roxburghii Rroxscaffold_2G00146460
rosa_rugosa Rorug02G0049800
rosa_samantha Rh2AG097900 Rh2BG099100 Rh2CG101200 Rh2DG098800
rosa_wichuraiana Rw2G007390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1048
AccB1I GGYRCC 1 cut(s) 1048
AccBSI CCGCTC 1 cut(s) 592
AccII CGCG 1 cut(s) 993
AccIII TCCGGA 1 cut(s) 373
AciI CCGC 4 cut(s) 504, 507, 590, 734
AclWI GGATC 3 cut(s) 182, 1366, 1739
AcoI YGGCCR 2 cut(s) 225, 570
AcsI RAATTY 5 cut(s) 34, 63, 1221, 1460, 1779
AfaI GTAC 4 cut(s) 70, 1050, 1308, 1671
AfiI CCNNNNNNNGG 6 cut(s) 127, 128, 730, 968, 1403, 1862
AflIII ACRYGT 1 cut(s) 919
AgeI ACCGGT 1 cut(s) 961
AgsI TTSAA 4 cut(s) 58, 328, 553, 934
AjiI CACGTC 1 cut(s) 1941
AjnI CCWGG 2 cut(s) 99, 1751
AjuI GAANNNNNNNTTGG 4 cut(s) 920, 952, 1628, 1660
AluBI AGCT 9 cut(s) 135, 165, 476, 538, 556, 686, 907, 1313, 1531
AluI AGCT 9 cut(s) 135, 165, 476, 538, 556, 686, 907, 1313, 1531
Alw21I GWGCWC 3 cut(s) 167, 383, 607
Alw26I GTCTC 5 cut(s) 551, 585, 810, 1756, 1761
Alw44I GTGCAC 1 cut(s) 379
AlwI GGATC 3 cut(s) 182, 1366, 1739
Ama87I CYCGRG 1 cut(s) 593
Aor13HI TCCGGA 1 cut(s) 373
AoxI GGCC 4 cut(s) 225, 570, 1700, 1894
ApaLI GTGCAC 1 cut(s) 379
ApeKI GCWGC 4 cut(s) 476, 629, 896, 1234
ApoI RAATTY 5 cut(s) 34, 63, 1221, 1460, 1779
AsiGI ACCGGT 1 cut(s) 961
Asp718I GGTACC 1 cut(s) 1048
AspLEI GCGC 1 cut(s) 1872
AspS9I GGNCC 4 cut(s) 1278, 1444, 1700, 1741
AsuC2I CCSGG 3 cut(s) 192, 652, 1699
AsuHPI GGTGA 2 cut(s) 842, 1634
AsuII TTCGAA 2 cut(s) 248, 1109
AvaI CYCGRG 1 cut(s) 593
AvaII GGWCC 3 cut(s) 1278, 1444, 1741
AxyI CCTNAGG 2 cut(s) 1885, 1928
BaeGI GKGCMC 1 cut(s) 383
BanI GGYRCC 1 cut(s) 1048
BanII GRGCYC 1 cut(s) 167
BbsI GAAGAC 1 cut(s) 76
Bbv12I GWGCWC 3 cut(s) 167, 383, 607
BbvI GCAGC 4 cut(s) 463, 616, 883, 1221
BccI CCATC 6 cut(s) 153, 378, 817, 1585, 1658, 1913
BcgI CGANNNNNNTGC 2 cut(s) 1089, 1123
BciT130I CCWGG 2 cut(s) 101, 1753
BciVI GTATCC 1 cut(s) 640
BcnI CCSGG 3 cut(s) 192, 652, 1699
BcoDI GTCTC 5 cut(s) 551, 585, 810, 1756, 1761
BfaI CTAG 2 cut(s) 1310, 1934
BfmI CTRYAG 4 cut(s) 94, 852, 1257, 1399
BfuI GTATCC 1 cut(s) 640
BisI GCNGC 5 cut(s) 477, 507, 630, 897, 1235
BlsI GCNGC 5 cut(s) 478, 508, 631, 898, 1236
Bme1390I CCNGG 5 cut(s) 101, 192, 652, 1699, 1753
Bme18I GGWCC 3 cut(s) 1278, 1444, 1741
BmeT110I CYCGRG 1 cut(s) 593
BmgBI CACGTC 1 cut(s) 1941
BmgT120I GGNCC 4 cut(s) 1278, 1444, 1700, 1741
BmiI GGNNCC 1 cut(s) 1050
BmrFI CCNGG 5 cut(s) 101, 192, 652, 1699, 1753
BmsI GCATC 6 cut(s) 268, 324, 931, 1097, 1509, 1757
BpiI GAAGAC 1 cut(s) 76
BpmI CTGGAG 1 cut(s) 551
Bpu14I TTCGAA 2 cut(s) 248, 1109
BpuEI CTTGAG 1 cut(s) 1046
BpuMI CCSGG 3 cut(s) 192, 652, 1699
BsaBI GATNNNNATC 1 cut(s) 1207
BsaI GGTCTC 2 cut(s) 1756, 1761
BsaJI CCNNGG 5 cut(s) 651, 1142, 1472, 1585, 1856
BsaWI WCCGGW 4 cut(s) 373, 386, 961, 1441
BsaXI ACNNNNNCTCC 8 cut(s) 337, 367, 524, 554, 1041, 1071, 1259, 1289
Bsc4I CCNNNNNNNGG 6 cut(s) 127, 128, 730, 968, 1403, 1862
Bse118I RCCGGY 3 cut(s) 559, 572, 961
Bse1I ACTGG 1 cut(s) 1299
Bse21I CCTNAGG 2 cut(s) 1885, 1928
Bse3DI GCAATG 3 cut(s) 624, 1656, 1686
Bse8I GATNNNNATC 1 cut(s) 1207
BseAI TCCGGA 1 cut(s) 373
BseBI CCWGG 2 cut(s) 101, 1753
BseDI CCNNGG 5 cut(s) 651, 1142, 1472, 1585, 1856
BseGI GGATG 7 cut(s) 283, 370, 946, 1086, 1174, 1694, 1748
BseJI GATNNNNATC 1 cut(s) 1207
BseLI CCNNNNNNNGG 6 cut(s) 127, 128, 730, 968, 1403, 1862
BseMI GCAATG 3 cut(s) 624, 1656, 1686
BseMII CTCAG 5 cut(s) 902, 998, 1355, 1469, 1772
BseNI ACTGG 1 cut(s) 1299
BseRI GAGGAG 4 cut(s) 144, 1013, 1280, 1873
BseSI GKGCMC 1 cut(s) 383
BseXI GCAGC 4 cut(s) 463, 616, 883, 1221
BsgI GTGCAG 2 cut(s) 406, 1680
Bsh1236I CGCG 1 cut(s) 993
BshFI GGCC 4 cut(s) 227, 572, 1702, 1896
BshNI GGYRCC 1 cut(s) 1048
BshTI ACCGGT 1 cut(s) 961
BsiHKAI GWGCWC 3 cut(s) 167, 383, 607
BsiHKCI CYCGRG 1 cut(s) 593
BsiSI CCGG 9 cut(s) 191, 374, 387, 560, 573, 651, 962, 1442, 1698
BslFI GGGAC 2 cut(s) 727, 1002
BslI CCNNNNNNNGG 6 cut(s) 127, 128, 730, 968, 1403, 1862
BsmAI GTCTC 5 cut(s) 551, 585, 810, 1756, 1761
BsmFI GGGAC 2 cut(s) 727, 1002
BsmI GAATGC 1 cut(s) 139
BsnI GGCC 4 cut(s) 227, 572, 1702, 1896
Bso31I GGTCTC 2 cut(s) 1756, 1761
BsoBI CYCGRG 1 cut(s) 593
Bsp119I TTCGAA 2 cut(s) 248, 1109
Bsp1286I GDGCHC 3 cut(s) 167, 383, 607
Bsp13I TCCGGA 1 cut(s) 373
Bsp1407I TGTACA 1 cut(s) 1669
Bsp143I GATC 4 cut(s) 187, 363, 1358, 1731
Bsp19I CCATGG 1 cut(s) 1472
BspACI CCGC 4 cut(s) 504, 507, 590, 734
BspANI GGCC 4 cut(s) 227, 572, 1702, 1896
BspCNI CTCAG 5 cut(s) 903, 997, 1356, 1468, 1771
BspEI TCCGGA 1 cut(s) 373
BspFNI CGCG 1 cut(s) 993
BspLI GGNNCC 1 cut(s) 1050
BspMAI CTGCAG 1 cut(s) 1403
BspPI GGATC 3 cut(s) 182, 1366, 1739
BspT104I TTCGAA 2 cut(s) 248, 1109
BspT107I GGYRCC 1 cut(s) 1048
BspTNI GGTCTC 2 cut(s) 1756, 1761
BsrBI CCGCTC 1 cut(s) 592
BsrDI GCAATG 3 cut(s) 624, 1656, 1686
BsrFI RCCGGY 3 cut(s) 559, 572, 961
BsrGI TGTACA 1 cut(s) 1669
BsrI ACTGG 1 cut(s) 1299
BssAI RCCGGY 3 cut(s) 559, 572, 961
BssECI CCNNGG 5 cut(s) 651, 1142, 1472, 1585, 1856
BssMI GATC 4 cut(s) 187, 363, 1358, 1731
BssT1I CCWWGG 3 cut(s) 1142, 1472, 1585
Bst2UI CCWGG 2 cut(s) 101, 1753
Bst6I CTCTTC 1 cut(s) 1195
BstAUI TGTACA 1 cut(s) 1669
BstBI TTCGAA 2 cut(s) 248, 1109
BstC8I GCNNGC 3 cut(s) 137, 622, 1868
BstDEI CTNAG 9 cut(s) 113, 911, 984, 1061, 1364, 1455, 1758, 1885, 1928
BstDSI CCRYGG 1 cut(s) 1472
BstF5I GGATG 7 cut(s) 283, 370, 946, 1086, 1174, 1694, 1748
BstFNI CGCG 1 cut(s) 993
BstHHI GCGC 1 cut(s) 1872
BstKTI GATC 4 cut(s) 190, 366, 1361, 1734
BstMAI GTCTC 5 cut(s) 551, 585, 810, 1756, 1761
BstMBI GATC 4 cut(s) 187, 363, 1358, 1731
BstMWI GCNNNNNNNGC 4 cut(s) 569, 626, 1310, 1398
BstNI CCWGG 2 cut(s) 101, 1753
BstNSI RCATGY 2 cut(s) 923, 1870
BstSCI CCNGG 5 cut(s) 99, 190, 650, 1697, 1751
BstSFI CTRYAG 4 cut(s) 94, 852, 1257, 1399
BstSLI GKGCMC 1 cut(s) 383
BstUI CGCG 1 cut(s) 993
BstV1I GCAGC 4 cut(s) 463, 616, 883, 1221
BstV2I GAAGAC 1 cut(s) 76
BstX2I RGATCY 2 cut(s) 1358, 1731
BstXI CCANNNNNNTGG 2 cut(s) 47, 1912
BstYI RGATCY 2 cut(s) 1358, 1731
Bsu36I CCTNAGG 2 cut(s) 1885, 1928
BsuI GTATCC 1 cut(s) 640
BsuRI GGCC 4 cut(s) 227, 572, 1702, 1896
BtgI CCRYGG 1 cut(s) 1472
BtrI CACGTC 1 cut(s) 1941
BtsCI GGATG 7 cut(s) 283, 370, 946, 1086, 1174, 1694, 1748
BtsI GCAGTG 3 cut(s) 1211, 1408, 1638
BtsIMutI CAGTG 8 cut(s) 268, 1048, 1082, 1182, 1211, 1306, 1408, 1638
Cac8I GCNNGC 3 cut(s) 137, 622, 1868
CfoI GCGC 1 cut(s) 1872
Cfr10I RCCGGY 3 cut(s) 559, 572, 961
Cfr13I GGNCC 4 cut(s) 1278, 1444, 1700, 1741
CseI GACGC 2 cut(s) 999, 1240
Csp6I GTAC 4 cut(s) 69, 1049, 1307, 1670
CspAI ACCGGT 1 cut(s) 961
CviAII CATG 4 cut(s) 920, 1473, 1605, 1867
CviQI GTAC 4 cut(s) 69, 1049, 1307, 1670
DdeI CTNAG 9 cut(s) 113, 911, 984, 1061, 1364, 1455, 1758, 1885, 1928
DpnI GATC 4 cut(s) 189, 365, 1360, 1733
DpnII GATC 4 cut(s) 187, 363, 1358, 1731
EaeI YGGCCR 2 cut(s) 225, 570
Eam1104I CTCTTC 1 cut(s) 1195
EarI CTCTTC 1 cut(s) 1195
EciI GGCGGA 1 cut(s) 749
Ecl136II GAGCTC 1 cut(s) 165
Eco130I CCWWGG 3 cut(s) 1142, 1472, 1585
Eco24I GRGCYC 1 cut(s) 167
Eco31I GGTCTC 2 cut(s) 1756, 1761
Eco47I GGWCC 3 cut(s) 1278, 1444, 1741
Eco53kI GAGCTC 1 cut(s) 165
Eco81I CCTNAGG 2 cut(s) 1885, 1928
Eco88I CYCGRG 1 cut(s) 593
EcoICRI GAGCTC 1 cut(s) 165
EcoRII CCWGG 2 cut(s) 99, 1751
EcoT14I CCWWGG 3 cut(s) 1142, 1472, 1585
EcoT22I ATGCAT 1 cut(s) 317
EcoT38I GRGCYC 1 cut(s) 167
ErhI CCWWGG 3 cut(s) 1142, 1472, 1585
FaeI CATG 4 cut(s) 923, 1476, 1608, 1870
FalI AAGNNNNNCTT 4 cut(s) 106, 138, 749, 781
FaqI GGGAC 2 cut(s) 727, 1002
FatI CATG 4 cut(s) 919, 1472, 1604, 1866
Fnu4HI GCNGC 5 cut(s) 477, 507, 630, 897, 1235
FokI GGATG 7 cut(s) 290, 357, 953, 1093, 1181, 1701, 1735
FriOI GRGCYC 1 cut(s) 167
Fsp4HI GCNGC 5 cut(s) 477, 507, 630, 897, 1235
FspBI CTAG 2 cut(s) 1310, 1934
GlaI GCGC 1 cut(s) 1871
GluI GCNGC 5 cut(s) 477, 507, 630, 897, 1235
GsuI CTGGAG 1 cut(s) 551
HaeIII GGCC 4 cut(s) 227, 572, 1702, 1896
HapII CCGG 9 cut(s) 191, 374, 387, 560, 573, 651, 962, 1442, 1698
HgaI GACGC 2 cut(s) 999, 1240
HhaI GCGC 1 cut(s) 1872
Hin1II CATG 4 cut(s) 923, 1476, 1608, 1870
Hin6I GCGC 1 cut(s) 1870
HinP1I GCGC 1 cut(s) 1870
HincII GTYRAC 2 cut(s) 1230, 1248
HindII GTYRAC 2 cut(s) 1230, 1248
HinfI GANTC 7 cut(s) 272, 544, 1004, 1028, 1034, 1111, 1890
HpaII CCGG 9 cut(s) 191, 374, 387, 560, 573, 651, 962, 1442, 1698
HphI GGTGA 2 cut(s) 842, 1634
Hpy166II GTNNAC 4 cut(s) 381, 1230, 1248, 1670
Hpy8I GTNNAC 4 cut(s) 381, 1230, 1248, 1670
Hpy99I CGWCG 1 cut(s) 998
HpyAV CCTTC 4 cut(s) 255, 329, 1117, 1174
HpyCH4IV ACGT 2 cut(s) 1515, 1940
HpyF10VI GCNNNNNNNGC 4 cut(s) 569, 626, 1310, 1398
HpyF3I CTNAG 9 cut(s) 113, 911, 984, 1061, 1364, 1455, 1758, 1885, 1928
HpySE526I ACGT 2 cut(s) 1515, 1940
Hsp92II CATG 4 cut(s) 923, 1476, 1608, 1870
HspAI GCGC 1 cut(s) 1870
Kpn2I TCCGGA 1 cut(s) 373
KpnI GGTACC 1 cut(s) 1052
Kzo9I GATC 4 cut(s) 187, 363, 1358, 1731
LmnI GCTCC 7 cut(s) 162, 170, 345, 610, 683, 1026, 1318
Lsp1109I GCAGC 4 cut(s) 463, 616, 883, 1221
LweI GCATC 6 cut(s) 268, 324, 931, 1097, 1509, 1757
MaeI CTAG 2 cut(s) 1310, 1934
MaeII ACGT 2 cut(s) 1515, 1940
MaeIII GTNAC 4 cut(s) 694, 835, 946, 1839
MalI GATC 4 cut(s) 189, 365, 1360, 1733
MbiI CCGCTC 1 cut(s) 592
MboI GATC 4 cut(s) 187, 363, 1358, 1731
MboII GAAGA 5 cut(s) 76, 140, 1182, 1313, 1361
MflI RGATCY 2 cut(s) 1358, 1731
MhlI GDGCHC 3 cut(s) 167, 383, 607
MlyI GAGTC 4 cut(s) 281, 553, 1037, 1884
MmeI TCCRAC 4 cut(s) 255, 918, 1139, 1336
Mph1103I ATGCAT 1 cut(s) 317
MroI TCCGGA 1 cut(s) 373
MseI TTAA 7 cut(s) 6, 267, 399, 666, 815, 1628, 1710
MslI CAYNNNNRTG 1 cut(s) 1943
MspI CCGG 9 cut(s) 191, 374, 387, 560, 573, 651, 962, 1442, 1698
MspR9I CCNGG 5 cut(s) 101, 192, 652, 1699, 1753
Mva1269I GAATGC 1 cut(s) 139
MvaI CCWGG 2 cut(s) 101, 1753
MvnI CGCG 1 cut(s) 993
MwoI GCNNNNNNNGC 4 cut(s) 569, 626, 1310, 1398
NciI CCSGG 3 cut(s) 192, 652, 1699
NcoI CCATGG 1 cut(s) 1472
NdeII GATC 4 cut(s) 187, 363, 1358, 1731
NlaIII CATG 4 cut(s) 923, 1476, 1608, 1870
NlaIV GGNNCC 1 cut(s) 1050
NmeAIII GCCGAG 1 cut(s) 1872
NmuCI GTSAC 1 cut(s) 1839
NsiI ATGCAT 1 cut(s) 317
NspI RCATGY 2 cut(s) 923, 1870
NspV TTCGAA 2 cut(s) 248, 1109
PaeI GCATGC 1 cut(s) 1870
PciI ACATGT 1 cut(s) 919
PcsI WCGNNNNNNNCGW 1 cut(s) 900
PctI GAATGC 1 cut(s) 139
PfeI GAWTC 3 cut(s) 1004, 1034, 1111
PinAI ACCGGT 1 cut(s) 961
PkrI GCNGC 5 cut(s) 478, 508, 631, 898, 1236
PleI GAGTC 4 cut(s) 280, 552, 1036, 1884
PpsI GAGTC 4 cut(s) 280, 552, 1036, 1884
PscI ACATGT 1 cut(s) 919
Psp124BI GAGCTC 1 cut(s) 167
Psp6I CCWGG 2 cut(s) 99, 1751
PspGI CCWGG 2 cut(s) 99, 1751
PspN4I GGNNCC 1 cut(s) 1050
PspPI GGNCC 4 cut(s) 1278, 1444, 1700, 1741
PstI CTGCAG 1 cut(s) 1403
PsuI RGATCY 2 cut(s) 1358, 1731
RsaI GTAC 4 cut(s) 70, 1050, 1308, 1671
RsaNI GTAC 4 cut(s) 69, 1049, 1307, 1670
RseI CAYNNNNRTG 1 cut(s) 1943
SacI GAGCTC 1 cut(s) 167
SaqAI TTAA 7 cut(s) 6, 267, 399, 666, 815, 1628, 1710
SatI GCNGC 5 cut(s) 477, 507, 630, 897, 1235
Sau3AI GATC 4 cut(s) 187, 363, 1358, 1731
Sau96I GGNCC 4 cut(s) 1278, 1444, 1700, 1741
SchI GAGTC 4 cut(s) 281, 553, 1037, 1884
ScrFI CCNGG 5 cut(s) 101, 192, 652, 1699, 1753
SduI GDGCHC 3 cut(s) 167, 383, 607
SfaNI GCATC 6 cut(s) 268, 324, 931, 1097, 1509, 1757
SfcI CTRYAG 4 cut(s) 94, 852, 1257, 1399
SfuI TTCGAA 2 cut(s) 248, 1109
SinI GGWCC 3 cut(s) 1278, 1444, 1741
SmiMI CAYNNNNRTG 1 cut(s) 1943
SmlI CTYRAG 1 cut(s) 1025
SmoI CTYRAG 1 cut(s) 1025
SphI GCATGC 1 cut(s) 1870
SsiI CCGC 4 cut(s) 504, 507, 590, 734
SspMI CTAG 2 cut(s) 1310, 1934
SstI GAGCTC 1 cut(s) 167
StyD4I CCNGG 5 cut(s) 99, 190, 650, 1697, 1751
StyI CCWWGG 3 cut(s) 1142, 1472, 1585
TaiI ACGT 2 cut(s) 1518, 1943
TaqI TCGA 6 cut(s) 157, 248, 542, 1109, 1263, 1634
TaqII GACCGA 1 cut(s) 1780
TatI WGTACW 3 cut(s) 68, 1306, 1669
TauI GCSGC 1 cut(s) 509
TfiI GAWTC 3 cut(s) 1004, 1034, 1111
Tru1I TTAA 7 cut(s) 6, 267, 399, 666, 815, 1628, 1710
Tru9I TTAA 7 cut(s) 6, 267, 399, 666, 815, 1628, 1710
TscAI CASTG 8 cut(s) 268, 1048, 1082, 1182, 1218, 1306, 1408, 1645
TseFI GTSAC 1 cut(s) 1839
TseI GCWGC 4 cut(s) 476, 629, 896, 1234
Tsp45I GTSAC 1 cut(s) 1839
TspDTI ATGAA 3 cut(s) 398, 1185, 1667
TspGWI ACGGA 1 cut(s) 1215
TspRI CASTG 8 cut(s) 268, 1048, 1082, 1182, 1218, 1306, 1408, 1645
VneI GTGCAC 1 cut(s) 379
VpaK11BI GGWCC 3 cut(s) 1278, 1444, 1741
XapI RAATTY 5 cut(s) 34, 63, 1221, 1460, 1779
XceI RCATGY 2 cut(s) 923, 1870
XcmI CCANNNNNNNNNTGG 4 cut(s) 19, 1080, 1149, 1352
XspI CTAG 2 cut(s) 1310, 1934
Zsp2I ATGCAT 1 cut(s) 317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.