AT1G68910

WPP domain-interacting tail-anchored protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
25908046 .. 25911277
3232 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G68910.1

Sequence Viewer

Length: 1884 bp
ATGGAGGAAATCATTAGGGAGGACTATTTTGAAGCTTTGTCTAGTAGGAATGAGGAAGAGCAAGAGATGTTGAGGATGTTGACAAAACTAGAGATAGACTCAGCTTATACTAGTGAAAAGTTGATGAATCTGCATGTTCTTCTTATGCATCTTTTGGCATGGGATAATGATCTTGAAGGGATGGGGACACTTGATTCTTCTCCAGCATCCTTTGAAAAAGCTTTGACGTTTGATCTGTTATGCGGTATATTGGAGTCAGAAGTGAAGGAGGTGGACGAGGTTTTGGATGTGTTGGAAGCTCAAATAGTTGACACTTCTTACAAGATATCTTCTTGCAAACACGGAAATTATATTGTTATTGAAGGAAAGTTGGGTGAATCTGCAGAATCATTGAAGCAGTCTAGAGGACAAGTCTCAGAGATCACTTTGCAATTAGCTCAGCTCCGAAGAACACTTCATTACATAAGAAATGGAACAAGTGAAAACGAGGAGTCAGTGGAGTTAAGGCAGAAATATGCGCTGAAACCATCGGACTTGAGGCATAAAAATGCTCTGAGGATGCTGGAGAAGTCATTGTCAAGAGAGCTAGAGCTTGAGAAGAAGTTAATGGAATTCCAGCAAAATGAGGAACAGTTGAAACTCAAGCTACACTACACAGAGGAGGTATCTTCTCGGATGGAAGAAGCATCAGAGTTTATATGGGGACGGTTTCTAGAGGCAGATAATTCTTCTGAGGTTCTTACAGGTATTTCAAAGGAACTTGTTGGTCGTCTACAGATTCTCCAGTTTAGTCTGAATGGGTCAGCACAACGGGAATCCGAACTTAAGTCTAAGCTTGAAGATTGCACTGTACAACTGGAAGCGAAAGATCTTCTGGTGCAAAAGCTTGAGGGAACAATTTCAGAAAATAGTGAAATAGTTTCAGAAGTACTCACTTTGAGGGAATATGTGAAGTCAGCTGAACAAAAGCTGAAAAATACCGACCTTGAGCTGAAAAGTGTCAACGCCTCCAAACAAGAAATCCTGGTACATCTAGCTGAAATGGAAAATGCAAATGAGTCGGTCAAAGAAAACCTTTTCGAGGCTGAAAGCAGAGCTGAGAGTGGAGAAGCTAAGATTAAAGAGCTAGATGCTGCAAATCTTGAACTTACTGAGGAACTAAATTTTCTCAAAGATGCGGATGATAAAAAGACGAAGAAGGTGAACTCTCTCGAGAAGCAAGTCAGGGAATTAGAAGTTCAAGTACAAAACTCCAAGGTATCATCAGAAGCAAATCAAGAACAGCAGAACATGTTGTATTCAGCAATATGGGACATGGAGACCTTAATAGAAGATCTCAAGTCTAAAGCCTCAAAAGCCGAGAGTAGAACGGAGACAGTGGAGGAGCAATGCATTGTGCTTTCTACCACAAACTCTGAACTCAACAAAGACGTGAGCTTTTTGAGGCAAAAAGCCAAATCCTTAGAAGCAATGTTGGATCTAGCTAACAATGAGAAAGAGAGATATGCACAAGAAATAACTACAAGGAACAAAGTTTTGATGGATATGATGTTGCAATTATCCAGTGAAAGGGAGCGTATACAAGAGCAGCTATATTCTTTGGCAAAAGAAAACAAAATACTTAGAGTGAATCAGTGCTCAAATACATACCAAAGAAATGGATCTTATGCTGGGGACAAAGAGCTGTCGTTTCACGCAGATGGTCACGAAATAGAGGCACTTGCTGAAAGTCTGCAGGAGGATGAGAGAACAAGGGAAGAACCAGAGAAGCAGTCTGTGTCTGAAAAGAGTAGCGAGATCAGAAGAGCAATCAAATTGAAACACATACTAGTTGTGGCCTTAGTTTTTGTGCTGTTTTGTTCATTCTTTGGTGTGACTTATTAA

Protein Analysis

627

Amino Acids

71.85

Weight (kDa)

4.85

Isoelectric Point (pI)

49.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WIT1_2_N PF26581 22 - 154 2.2e-46 WIT1/2, N-terminal helical bundle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 772, 1579
AciI CCGC 2 cut(s) 243, 1178
AclWI GGATC 2 cut(s) 1485, 1669
AcsI RAATTY 2 cut(s) 611, 1162
AfaI GTAC 4 cut(s) 852, 930, 1029, 1245
AfiI CCNNNNNNNGG 2 cut(s) 1081, 1569
AflII CTTAAG 1 cut(s) 824
AflIII ACRYGT 1 cut(s) 1290
AhlI ACTAGT 2 cut(s) 110, 1828
AjiI CACGTC 1 cut(s) 1432
AjnI CCWGG 1 cut(s) 1023
Alw21I GWGCWC 1 cut(s) 1640
Alw26I GTCTC 3 cut(s) 418, 1313, 1367
AlwI GGATC 2 cut(s) 1485, 1669
Ama87I CYCGRG 1 cut(s) 1211
AoxI GGCC 1 cut(s) 1836
ApeKI GCWGC 2 cut(s) 1133, 1588
ApoI RAATTY 2 cut(s) 611, 1162
Asp700I GAANNNNTTC 1 cut(s) 898
AspLEI GCGC 1 cut(s) 520
AsuHPI GGTGA 2 cut(s) 386, 1213
AvaI CYCGRG 1 cut(s) 1211
BarI GAAGNNNNNNTAC 2 cut(s) 1227, 1259
Bbv12I GWGCWC 1 cut(s) 1640
BbvI GCAGC 2 cut(s) 1120, 1600
BccI CCATC 5 cut(s) 175, 535, 670, 1534, 1694
BcgI CGANNNNNNTGC 2 cut(s) 1041, 1075
BciT130I CCWGG 1 cut(s) 1025
BcoDI GTCTC 3 cut(s) 418, 1313, 1367
BcuI ACTAGT 2 cut(s) 110, 1828
BfmI CTRYAG 3 cut(s) 381, 773, 1733
BfrI CTTAAG 1 cut(s) 824
BglII AGATCT 2 cut(s) 868, 1333
BisI GCNGC 2 cut(s) 1134, 1589
BlpI GCTNAGC 1 cut(s) 438
BlsI GCNGC 2 cut(s) 1135, 1590
BmcAI AGTACT 1 cut(s) 930
Bme1390I CCNGG 1 cut(s) 1025
BmeT110I CYCGRG 1 cut(s) 1211
BmgBI CACGTC 1 cut(s) 1432
BmrFI CCNGG 1 cut(s) 1025
BmsI GCATC 6 cut(s) 157, 215, 549, 695, 1120, 1165
BplI GAGNNNNNCTC 2 cut(s) 83, 115
BpmI CTGGAG 3 cut(s) 186, 584, 767
Bpu1102I GCTNAGC 1 cut(s) 438
BpuEI CTTGAG 6 cut(s) 556, 614, 626, 908, 1007, 1322
BsaBI GATNNNNATC 1 cut(s) 168
BsaI GGTCTC 1 cut(s) 1313
BsaJI CCNNGG 1 cut(s) 1254
BsaXI ACNNNNNCTCC 2 cut(s) 765, 795
Bsc4I CCNNNNNNNGG 2 cut(s) 1081, 1569
Bse1I ACTGG 3 cut(s) 784, 861, 1563
Bse3DI GCAATG 2 cut(s) 1394, 1476
Bse8I GATNNNNATC 1 cut(s) 168
BseBI CCWGG 1 cut(s) 1025
BseDI CCNNGG 1 cut(s) 1254
BseGI GGATG 8 cut(s) 81, 186, 206, 292, 564, 681, 1186, 1747
BseJI GATNNNNATC 1 cut(s) 168
BseLI CCNNNNNNNGG 2 cut(s) 1081, 1569
BseMI GCAATG 2 cut(s) 1394, 1476
BseMII CTCAG 7 cut(s) 114, 429, 452, 545, 723, 1089, 1143
BseNI ACTGG 3 cut(s) 784, 861, 1563
BseRI GAGGAG 3 cut(s) 503, 674, 1397
BseXI GCAGC 2 cut(s) 1120, 1600
BseYI CCCAGC 1 cut(s) 1670
BshFI GGCC 1 cut(s) 1838
BsiHKAI GWGCWC 1 cut(s) 1640
BsiHKCI CYCGRG 1 cut(s) 1211
BslFI GGGAC 4 cut(s) 199, 717, 1325, 1688
BslI CCNNNNNNNGG 2 cut(s) 1081, 1569
BsmAI GTCTC 3 cut(s) 418, 1313, 1367
BsmFI GGGAC 4 cut(s) 199, 717, 1325, 1688
BsnI GGCC 1 cut(s) 1838
Bso31I GGTCTC 1 cut(s) 1313
BsoBI CYCGRG 1 cut(s) 1211
Bsp1286I GDGCHC 1 cut(s) 1640
Bsp1407I TGTACA 1 cut(s) 850
Bsp143I GATC 8 cut(s) 169, 232, 420, 868, 1333, 1477, 1661, 1797
Bsp1720I GCTNAGC 1 cut(s) 438
BspACI CCGC 2 cut(s) 243, 1178
BspANI GGCC 1 cut(s) 1838
BspCNI CTCAG 7 cut(s) 113, 428, 451, 546, 724, 1090, 1144
BspMAI CTGCAG 2 cut(s) 385, 1737
BspPI GGATC 2 cut(s) 1485, 1669
BspQI GCTCTTC 2 cut(s) 51, 1798
BspTI CTTAAG 1 cut(s) 824
BspTNI GGTCTC 1 cut(s) 1313
BsrDI GCAATG 2 cut(s) 1394, 1476
BsrGI TGTACA 1 cut(s) 850
BsrI ACTGG 3 cut(s) 784, 861, 1563
BssECI CCNNGG 1 cut(s) 1254
BssMI GATC 8 cut(s) 169, 232, 420, 868, 1333, 1477, 1661, 1797
BssNAI GTATAC 1 cut(s) 1580
BssT1I CCWWGG 1 cut(s) 1254
Bst1107I GTATAC 1 cut(s) 1580
Bst2UI CCWGG 1 cut(s) 1025
Bst4CI ACNGT 4 cut(s) 633, 708, 850, 1378
Bst6I CTCTTC 2 cut(s) 51, 1798
BstAFI CTTAAG 1 cut(s) 824
BstAUI TGTACA 1 cut(s) 850
BstENI CCTNNNNNAGG 1 cut(s) 1079
BstF5I GGATG 8 cut(s) 81, 186, 206, 292, 564, 681, 1186, 1747
BstHHI GCGC 1 cut(s) 520
BstKTI GATC 8 cut(s) 172, 235, 423, 871, 1336, 1480, 1664, 1800
BstMAI GTCTC 3 cut(s) 418, 1313, 1367
BstMBI GATC 8 cut(s) 169, 232, 420, 868, 1333, 1477, 1661, 1797
BstMWI GCNNNNNNNGC 1 cut(s) 1355
BstNI CCWGG 1 cut(s) 1025
BstNSI RCATGY 2 cut(s) 137, 1294
BstSCI CCNGG 1 cut(s) 1023
BstSFI CTRYAG 3 cut(s) 381, 773, 1733
BstV1I GCAGC 2 cut(s) 1120, 1600
BstX2I RGATCY 4 cut(s) 868, 1333, 1477, 1661
BstXI CCANNNNNNTGG 1 cut(s) 1658
BstYI RGATCY 4 cut(s) 868, 1333, 1477, 1661
BstZ17I GTATAC 1 cut(s) 1580
BsuRI GGCC 1 cut(s) 1838
BtrI CACGTC 1 cut(s) 1432
BtsCI GGATG 8 cut(s) 81, 186, 206, 292, 564, 681, 1186, 1747
BtsIMutI CAGTG 5 cut(s) 501, 846, 1383, 1570, 1640
CfoI GCGC 1 cut(s) 520
Csp6I GTAC 4 cut(s) 851, 929, 1028, 1244
CviAII CATG 4 cut(s) 134, 159, 1291, 1315
CviQI GTAC 4 cut(s) 851, 929, 1028, 1244
DpnI GATC 8 cut(s) 171, 234, 422, 870, 1335, 1479, 1663, 1799
DpnII GATC 8 cut(s) 169, 232, 420, 868, 1333, 1477, 1661, 1797
Eam1104I CTCTTC 2 cut(s) 51, 1798
EarI CTCTTC 2 cut(s) 51, 1798
Eco130I CCWWGG 1 cut(s) 1254
Eco31I GGTCTC 1 cut(s) 1313
Eco32I GATATC 1 cut(s) 327
Eco88I CYCGRG 1 cut(s) 1211
EcoNI CCTNNNNNAGG 1 cut(s) 1079
EcoRI GAATTC 1 cut(s) 611
EcoRII CCWGG 1 cut(s) 1023
EcoRV GATATC 1 cut(s) 327
EcoT14I CCWWGG 1 cut(s) 1254
EcoT22I ATGCAT 2 cut(s) 150, 1394
ErhI CCWWGG 1 cut(s) 1254
FaeI CATG 4 cut(s) 137, 162, 1294, 1318
FalI AAGNNNNNCTT 2 cut(s) 1059, 1091
FaqI GGGAC 4 cut(s) 199, 717, 1325, 1688
FatI CATG 4 cut(s) 133, 158, 1290, 1314
FblI GTMKAC 2 cut(s) 772, 1579
Fnu4HI GCNGC 2 cut(s) 1134, 1589
FokI GGATG 8 cut(s) 88, 193, 193, 299, 571, 688, 1193, 1754
Fsp4HI GCNGC 2 cut(s) 1134, 1589
GlaI GCGC 1 cut(s) 519
GluI GCNGC 2 cut(s) 1134, 1589
GsaI CCCAGC 1 cut(s) 1674
GsuI CTGGAG 3 cut(s) 186, 584, 767
HaeIII GGCC 1 cut(s) 1838
HhaI GCGC 1 cut(s) 520
Hin1II CATG 4 cut(s) 137, 162, 1294, 1318
Hin6I GCGC 1 cut(s) 518
HinP1I GCGC 1 cut(s) 518
HincII GTYRAC 3 cut(s) 81, 310, 1003
HindII GTYRAC 3 cut(s) 81, 310, 1003
HindIII AAGCTT 4 cut(s) 33, 219, 833, 884
HphI GGTGA 2 cut(s) 386, 1213
Hpy166II GTNNAC 7 cut(s) 81, 274, 310, 773, 1003, 1204, 1580
Hpy188III TCNNGA 9 cut(s) 173, 402, 579, 713, 1142, 1211, 1213, 1277, 1706
Hpy8I GTNNAC 7 cut(s) 81, 274, 310, 773, 1003, 1204, 1580
HpyAV CCTTC 4 cut(s) 170, 259, 356, 1192
HpyCH4III ACNGT 4 cut(s) 633, 708, 850, 1378
HpyCH4IV ACGT 2 cut(s) 227, 1431
HpyF10VI GCNNNNNNNGC 1 cut(s) 1355
HpySE526I ACGT 2 cut(s) 227, 1431
Hsp92II CATG 4 cut(s) 137, 162, 1294, 1318
HspAI GCGC 1 cut(s) 518
Kzo9I GATC 8 cut(s) 169, 232, 420, 868, 1333, 1477, 1661, 1797
LguI GCTCTTC 2 cut(s) 51, 1798
LmnI GCTCC 3 cut(s) 447, 1384, 1573
Lsp1109I GCAGC 2 cut(s) 1120, 1600
LweI GCATC 6 cut(s) 157, 215, 549, 695, 1120, 1165
MaeII ACGT 2 cut(s) 227, 1431
MaeIII GTNAC 2 cut(s) 1703, 1873
MalI GATC 8 cut(s) 171, 234, 422, 870, 1335, 1479, 1663, 1799
MboI GATC 8 cut(s) 169, 232, 420, 868, 1333, 1477, 1661, 1797
MflI RGATCY 4 cut(s) 868, 1333, 1477, 1661
MhlI GDGCHC 1 cut(s) 1640
MluCI AATT 9 cut(s) 346, 431, 611, 724, 897, 1162, 1229, 1556, 1814
MlyI GAGTC 4 cut(s) 92, 263, 500, 1067
MmeI TCCRAC 2 cut(s) 273, 1455
Mph1103I ATGCAT 2 cut(s) 150, 1394
MroXI GAANNNNTTC 1 cut(s) 898
MseI TTAA 6 cut(s) 503, 605, 825, 1119, 1325, 1882
MslI CAYNNNNRTG 2 cut(s) 546, 1698
MspA1I CMGCKG 1 cut(s) 959
MspCI CTTAAG 1 cut(s) 824
MspR9I CCNGG 1 cut(s) 1025
MvaI CCWGG 1 cut(s) 1025
MwoI GCNNNNNNNGC 1 cut(s) 1355
NdeII GATC 8 cut(s) 169, 232, 420, 868, 1333, 1477, 1661, 1797
NlaIII CATG 4 cut(s) 137, 162, 1294, 1318
NmeAIII GCCGAG 1 cut(s) 1384
NmuCI GTSAC 2 cut(s) 1703, 1873
NsiI ATGCAT 2 cut(s) 150, 1394
NspI RCATGY 2 cut(s) 137, 1294
PaeR7I CTCGAG 1 cut(s) 1211
PciI ACATGT 1 cut(s) 1290
PciSI GCTCTTC 2 cut(s) 51, 1798
PdmI GAANNNNTTC 1 cut(s) 898
PfeI GAWTC 7 cut(s) 127, 194, 377, 386, 778, 815, 1630
PkrI GCNGC 2 cut(s) 1135, 1590
PleI GAGTC 4 cut(s) 92, 262, 499, 1066
PpsI GAGTC 4 cut(s) 92, 262, 499, 1066
PscI ACATGT 1 cut(s) 1290
Psp6I CCWGG 1 cut(s) 1023
PspFI CCCAGC 1 cut(s) 1670
PspGI CCWGG 1 cut(s) 1023
PstI CTGCAG 2 cut(s) 385, 1737
PsuI RGATCY 4 cut(s) 868, 1333, 1477, 1661
PvuII CAGCTG 1 cut(s) 959
RsaI GTAC 4 cut(s) 852, 930, 1029, 1245
RsaNI GTAC 4 cut(s) 851, 929, 1028, 1244
RseI CAYNNNNRTG 2 cut(s) 546, 1698
SapI GCTCTTC 2 cut(s) 51, 1798
SaqAI TTAA 6 cut(s) 503, 605, 825, 1119, 1325, 1882
SatI GCNGC 2 cut(s) 1134, 1589
Sau3AI GATC 8 cut(s) 169, 232, 420, 868, 1333, 1477, 1661, 1797
ScaI AGTACT 1 cut(s) 930
SchI GAGTC 4 cut(s) 92, 263, 500, 1067
ScrFI CCNGG 1 cut(s) 1025
SduI GDGCHC 1 cut(s) 1640
SfaNI GCATC 6 cut(s) 157, 215, 549, 695, 1120, 1165
SfcI CTRYAG 3 cut(s) 381, 773, 1733
Sfr274I CTCGAG 1 cut(s) 1211
SlaI CTCGAG 1 cut(s) 1211
SmiMI CAYNNNNRTG 2 cut(s) 546, 1698
SmlI CTYRAG 8 cut(s) 535, 593, 641, 824, 887, 986, 1211, 1337
SmoI CTYRAG 8 cut(s) 535, 593, 641, 824, 887, 986, 1211, 1337
SpeI ACTAGT 2 cut(s) 110, 1828
Sse9I AATT 9 cut(s) 346, 431, 611, 724, 897, 1162, 1229, 1556, 1814
SsiI CCGC 2 cut(s) 243, 1178
StyD4I CCNGG 1 cut(s) 1023
StyI CCWWGG 1 cut(s) 1254
TaaI ACNGT 4 cut(s) 633, 708, 850, 1378
TaiI ACGT 2 cut(s) 230, 1434
TaqI TCGA 2 cut(s) 1080, 1212
TaqII GACCGA 1 cut(s) 1051
TasI AATT 9 cut(s) 346, 431, 611, 724, 897, 1162, 1229, 1556, 1814
TatI WGTACW 3 cut(s) 850, 928, 1243
TfiI GAWTC 7 cut(s) 127, 194, 377, 386, 778, 815, 1630
Tru1I TTAA 6 cut(s) 503, 605, 825, 1119, 1325, 1882
Tru9I TTAA 6 cut(s) 503, 605, 825, 1119, 1325, 1882
TscAI CASTG 5 cut(s) 501, 853, 1383, 1570, 1640
TseFI GTSAC 2 cut(s) 1703, 1873
TseI GCWGC 2 cut(s) 1133, 1588
Tsp45I GTSAC 2 cut(s) 1703, 1873
TspDTI ATGAA 3 cut(s) 140, 446, 1851
TspGWI ACGGA 2 cut(s) 357, 1385
TspRI CASTG 5 cut(s) 501, 853, 1383, 1570, 1640
Vha464I CTTAAG 1 cut(s) 824
XagI CCTNNNNNAGG 1 cut(s) 1079
XapI RAATTY 2 cut(s) 611, 1162
XbaI TCTAGA 2 cut(s) 401, 712
XceI RCATGY 2 cut(s) 137, 1294
XhoI CTCGAG 1 cut(s) 1211
XmiI GTMKAC 2 cut(s) 772, 1579
XmnI GAANNNNTTC 1 cut(s) 898
ZrmI AGTACT 1 cut(s) 930
Zsp2I ATGCAT 2 cut(s) 150, 1394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.