Rmu_sc0008325.1_g000019

WPP domain-interacting tail-anchored protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008325.1
Physical Location & Seq
Forward (+)
60242 .. 62582
2341 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008325.1_g000019.1.cds

Sequence Viewer

Length: 2082 bp
atggaagaccaagctgtctgtgatgttgatgttagcagtccagagttggagataggctacacacatcaagggatgtcagctagtgaatctggcactgaagagttggagagttccatgaaagttttgacaaaggtggacttggacttggcatattctgctgagaagttggcaaatctgcaggcgcttatgatgcgcctgttctctcaggaaaatgatcttgaagcaatggccaccgcaaataactatatcttggctgattttcatgagaaagtattggtctttaatctcatgtctagcattttagattccgaggtcagagagatggacagtttcatggatactctccatgcagaaattgttgacgcccatcatacgatattttcatggagtcatttgggagaactgtacacagcaatggaagaaaagttgtatgattctgaagagtccttaaagcagtgtcaggaacaggtttcagaggtcaagatgctggcagctaactttcggagaactgctatagcttttgcacatgacaactggaaaactgacattgccatggatttatcagaagatagtcaactgtcaaataattatgcaaagtacaatatgcagatgcctagacaacaaagacacaatctacggatgcttgaaaaatcacgggagatagatcttgagaagaaattaactcaatcaagaaaaaatgaggagcaacttcagctaaagctacactatacagaacaggtagcggttcgcatggaagaagcagcagaaggtatttggggaagatttttagaggcagagaatgctgctgaggtgctccaggggatttcaaaggatttattagggagactgcagcttctgaatttcaatctgaatggttcaattcaccgtgaaagcgacttaaaatccaaacttcaagattgtttaggagagcttcaagcaaaagatgctgctttacagaagctagagcatatcagtgcagaaaacatgaccaaagatgctgagatatcaactttgagagaaaaggtgctgtttcttgaaaaacagctgacagaatccaagctccagctgaagaatgcaaatacaaccaatgaatcaagtctagagaaacttagagaaaaggagactttggttgagtctatgaaagaaagaatctacagggaagaagttaaaacggagagtgcactacttaaggttgcagaattaactgggacgaatgtggaactcacagaagagatgaattttctcaaaggaagtgttagtaacacggaaaagaaagttgggattctcgagaagcagttaagggacgtagagatccaattacagaatgcaaaggcatcttctgaagcaagtcaagagcagcagaatatgttgtattctgcaatttgggatatggaaactttgattgaagatctaaaatcaaaggtttccaaagctgaaaataagacagaaactgctgaggaacaatgcattacgttatctgaaaataacatagagctaaatgcagaaataattgatctaaggggtagagtggaatatttgcagtcatctttggatcgagctaacaatgcaaaacttgcaagtgcaaaggaactcaataccagaatcaagttcattatggatatggcaatgcaactagccatggaaagggagcgcatccaaaagcagctacatgtcttagccatggagaaacaacttctggtagagaagttacgggataccaaaaacattgcttctgtaactggttgcagcaacgaagatggtgacaacaaagagcttccatgttttaagtatggtgtctcgaatgctacttctataaacacatcagtggaagcagtgacggagtccttagataaaagttcccaggtggatgaactgtcacaacaggaacctgactgtgataatgaaggggcttccagttctttagatgatgctgctggcattggttcagaacttgacactgctggagaagccaggcgatgcttgaacctaaagtgtgctttcaaagtaatttttgtctcactatttctagtctcagtcctatattttcttgaccagaaacctttaatcctcgacgaactatga
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

693

Amino Acids

78.45

Weight (kDa)

4.74

Isoelectric Point (pI)

43.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 14
AciI CCGC 2 cut(s) 234, 743
AclWI GGATC 2 cut(s) 1306, 1560
AcoI YGGCCR 1 cut(s) 228
AcsI RAATTY 2 cut(s) 859, 1237
AcuI CTGAAG 5 cut(s) 117, 459, 695, 1088, 1362
AcyI GRCGYC 1 cut(s) 363
AfaI GTAC 2 cut(s) 407, 599
AfiI CCNNNNNNNGG 1 cut(s) 1644
AflII CTTAAG 1 cut(s) 1187
AflIII ACRYGT 1 cut(s) 1669
AjnI CCWGG 3 cut(s) 816, 1860, 1970
AjuI GAANNNNNNNTTGG 2 cut(s) 1260, 1292
AleI CACNNNNGTG 1 cut(s) 1823
Alw21I GWGCWC 2 cut(s) 816, 1183
Alw26I GTCTC 5 cut(s) 838, 1115, 1801, 2020, 2035
Alw44I GTGCAC 1 cut(s) 1179
AlwI GGATC 2 cut(s) 1306, 1560
AlwNI CAGNNNCTG 2 cut(s) 856, 1451
Ama87I CYCGRG 1 cut(s) 1286
AoxI GGCC 1 cut(s) 228
ApaLI GTGCAC 1 cut(s) 1179
ApeKI GCWGC 9 cut(s) 491, 761, 803, 850, 947, 1357, 1663, 1746, 1931
ApoI RAATTY 2 cut(s) 859, 1237
AspLEI GCGC 3 cut(s) 184, 195, 1653
AsuHPI GGTGA 2 cut(s) 875, 1772
AvaI CYCGRG 1 cut(s) 1286
BaeGI GKGCMC 1 cut(s) 1183
BalI TGGCCA 1 cut(s) 230
BbsI GAAGAC 1 cut(s) 12
Bbv12I GWGCWC 2 cut(s) 816, 1183
BbvCI CCTCAGC 2 cut(s) 807, 1455
BbvI GCAGC 9 cut(s) 503, 773, 790, 862, 934, 1369, 1675, 1758, 1918
BccI CCATC 3 cut(s) 316, 375, 1751
BciT130I CCWGG 3 cut(s) 818, 1862, 1972
BciVI GTATCC 2 cut(s) 331, 1708
BcoDI GTCTC 5 cut(s) 838, 1115, 1801, 2020, 2035
BfaI CTAG 7 cut(s) 81, 294, 615, 962, 1100, 1634, 2027
BfmI CTRYAG 4 cut(s) 176, 513, 848, 1153
BfoI RGCGCY 1 cut(s) 185
BfrI CTTAAG 1 cut(s) 1187
BfuI GTATCC 2 cut(s) 331, 1708
BglII AGATCT 2 cut(s) 664, 1408
BisI GCNGC 9 cut(s) 492, 762, 804, 851, 948, 1358, 1664, 1747, 1932
BlsI GCNGC 9 cut(s) 493, 763, 805, 852, 949, 1359, 1665, 1748, 1933
Bme1390I CCNGG 3 cut(s) 818, 1862, 1972
BmeT110I CYCGRG 1 cut(s) 1286
BmiI GGNNCC 1 cut(s) 1887
BmrFI CCNGG 3 cut(s) 818, 1862, 1972
BmrI ACTGGG 1 cut(s) 1215
BmuI ACTGGG 1 cut(s) 1215
BpiI GAAGAC 1 cut(s) 12
BpmI CTGGAG 3 cut(s) 800, 1046, 1983
Bpu10I CCTNAGC 2 cut(s) 807, 1455
BpuEI CTTGAG 1 cut(s) 689
BsaHI GRCGYC 1 cut(s) 363
BsaJI CCNNGG 6 cut(s) 309, 552, 817, 1638, 1680, 1860
Bsc4I CCNNNNNNNGG 1 cut(s) 1644
Bse1I ACTGG 4 cut(s) 539, 1210, 1744, 1914
Bse3DI GCAATG 5 cut(s) 231, 420, 546, 1632, 1725
BseBI CCWGG 3 cut(s) 818, 1862, 1972
BseDI CCNNGG 6 cut(s) 309, 552, 817, 1638, 1680, 1860
BseGI GGATG 4 cut(s) 78, 645, 1653, 1873
BseLI CCNNNNNNNGG 1 cut(s) 1644
BseMI GCAATG 5 cut(s) 231, 420, 546, 1632, 1725
BseMII CTCAG 6 cut(s) 150, 218, 798, 990, 1446, 2046
BseNI ACTGG 4 cut(s) 539, 1210, 1744, 1914
BseRI GAGGAG 1 cut(s) 716
BseSI GKGCMC 1 cut(s) 1183
BseXI GCAGC 9 cut(s) 503, 773, 790, 862, 934, 1369, 1675, 1758, 1918
BsgI GTGCAG 1 cut(s) 996
BshFI GGCC 1 cut(s) 230
BsiHKAI GWGCWC 2 cut(s) 816, 1183
BsiHKCI CYCGRG 1 cut(s) 1286
BslFI GGGAC 2 cut(s) 1222, 1316
BslI CCNNNNNNNGG 1 cut(s) 1644
BsmAI GTCTC 5 cut(s) 838, 1115, 1801, 2020, 2035
BsmFI GGGAC 2 cut(s) 1222, 1316
BsmI GAATGC 4 cut(s) 805, 1078, 1330, 1807
BsnI GGCC 1 cut(s) 230
BsoBI CYCGRG 1 cut(s) 1286
Bsp1286I GDGCHC 2 cut(s) 816, 1183
Bsp1407I TGTACA 1 cut(s) 405
Bsp143I GATC 6 cut(s) 214, 664, 1311, 1408, 1513, 1552
Bsp19I CCATGG 3 cut(s) 552, 1638, 1680
BspACI CCGC 2 cut(s) 234, 743
BspANI GGCC 1 cut(s) 230
BspCNI CTCAG 6 cut(s) 151, 217, 799, 991, 1447, 2045
BspHI TCATGA 1 cut(s) 262
BspLI GGNNCC 1 cut(s) 1887
BspMAI CTGCAG 2 cut(s) 180, 852
BspPI GGATC 2 cut(s) 1306, 1560
BspTI CTTAAG 1 cut(s) 1187
BsrDI GCAATG 5 cut(s) 231, 420, 546, 1632, 1725
BsrGI TGTACA 1 cut(s) 405
BsrI ACTGG 4 cut(s) 539, 1210, 1744, 1914
BssECI CCNNGG 6 cut(s) 309, 552, 817, 1638, 1680, 1860
BssMI GATC 6 cut(s) 214, 664, 1311, 1408, 1513, 1552
BssNI GRCGYC 1 cut(s) 363
BssT1I CCWWGG 3 cut(s) 552, 1638, 1680
Bst2UI CCWGG 3 cut(s) 818, 1862, 1972
Bst4CI ACNGT 6 cut(s) 329, 405, 579, 887, 1875, 1895
Bst6I CTCTTC 3 cut(s) 93, 435, 1224
BstACI GRCGYC 1 cut(s) 363
BstAFI CTTAAG 1 cut(s) 1187
BstAPI GCANNNNNTGC 4 cut(s) 155, 800, 944, 1574
BstAUI TGTACA 1 cut(s) 405
BstC8I GCNNGC 3 cut(s) 180, 489, 1936
BstDSI CCRYGG 3 cut(s) 552, 1638, 1680
BstF5I GGATG 4 cut(s) 78, 645, 1653, 1873
BstH2I RGCGCY 1 cut(s) 185
BstHHI GCGC 3 cut(s) 184, 195, 1653
BstKTI GATC 6 cut(s) 217, 667, 1314, 1411, 1516, 1555
BstMAI GTCTC 5 cut(s) 838, 1115, 1801, 2020, 2035
BstMBI GATC 6 cut(s) 214, 664, 1311, 1408, 1513, 1552
BstMWI GCNNNNNNNGC 8 cut(s) 155, 190, 712, 800, 944, 1565, 1574, 1967
BstNI CCWGG 3 cut(s) 818, 1862, 1972
BstNSI RCATGY 1 cut(s) 1673
BstSCI CCNGG 3 cut(s) 816, 1860, 1970
BstSFI CTRYAG 4 cut(s) 176, 513, 848, 1153
BstSLI GKGCMC 1 cut(s) 1183
BstV1I GCAGC 9 cut(s) 503, 773, 790, 862, 934, 1369, 1675, 1758, 1918
BstV2I GAAGAC 1 cut(s) 12
BstX2I RGATCY 3 cut(s) 664, 1311, 1408
BstYI RGATCY 3 cut(s) 664, 1311, 1408
BsuI GTATCC 2 cut(s) 331, 1708
BsuRI GGCC 1 cut(s) 230
BtgI CCRYGG 3 cut(s) 552, 1638, 1680
BtgZI GCGATG 1 cut(s) 1990
BtsCI GGATG 4 cut(s) 78, 645, 1653, 1873
BtsI GCAGTG 3 cut(s) 461, 1839, 1956
BtsIMutI CAGTG 6 cut(s) 93, 461, 979, 1830, 1839, 1956
Cac8I GCNNGC 3 cut(s) 180, 489, 1936
CaiI CAGNNNCTG 2 cut(s) 856, 1451
CciI TCATGA 1 cut(s) 262
CfoI GCGC 3 cut(s) 184, 195, 1653
CseI GACGC 1 cut(s) 371
Csp6I GTAC 2 cut(s) 406, 598
CviQI GTAC 2 cut(s) 406, 598
DpnI GATC 6 cut(s) 216, 666, 1313, 1410, 1515, 1554
DpnII GATC 6 cut(s) 214, 664, 1311, 1408, 1513, 1552
DrdI GACNNNNNNGTC 1 cut(s) 14
DseDI GACNNNNNNGTC 1 cut(s) 14
EaeI YGGCCR 1 cut(s) 228
Eam1104I CTCTTC 3 cut(s) 93, 435, 1224
EarI CTCTTC 3 cut(s) 93, 435, 1224
Eco130I CCWWGG 3 cut(s) 552, 1638, 1680
Eco32I GATATC 1 cut(s) 1005
Eco57I CTGAAG 5 cut(s) 117, 459, 695, 1088, 1362
Eco88I CYCGRG 1 cut(s) 1286
EcoRII CCWGG 3 cut(s) 816, 1860, 1970
EcoRV GATATC 1 cut(s) 1005
EcoT14I CCWWGG 3 cut(s) 552, 1638, 1680
EcoT22I ATGCAT 1 cut(s) 1469
ErhI CCWWGG 3 cut(s) 552, 1638, 1680
FalI AAGNNNNNCTT 2 cut(s) 122, 154
FaqI GGGAC 2 cut(s) 1222, 1316
Fnu4HI GCNGC 9 cut(s) 492, 762, 804, 851, 948, 1358, 1664, 1747, 1932
FokI GGATG 4 cut(s) 85, 652, 1640, 1880
Fsp4HI GCNGC 9 cut(s) 492, 762, 804, 851, 948, 1358, 1664, 1747, 1932
FspBI CTAG 7 cut(s) 81, 294, 615, 962, 1100, 1634, 2027
GlaI GCGC 3 cut(s) 183, 194, 1652
GluI GCNGC 9 cut(s) 492, 762, 804, 851, 948, 1358, 1664, 1747, 1932
GsuI CTGGAG 3 cut(s) 800, 1046, 1983
HaeII RGCGCY 1 cut(s) 185
HaeIII GGCC 1 cut(s) 230
HgaI GACGC 1 cut(s) 371
HhaI GCGC 3 cut(s) 184, 195, 1653
Hin1I GRCGYC 1 cut(s) 363
Hin6I GCGC 3 cut(s) 182, 193, 1651
HinP1I GCGC 3 cut(s) 182, 193, 1651
HincII GTYRAC 2 cut(s) 361, 575
HindII GTYRAC 2 cut(s) 361, 575
HphI GGTGA 2 cut(s) 875, 1772
Hpy166II GTNNAC 5 cut(s) 136, 361, 408, 575, 1181
Hpy8I GTNNAC 5 cut(s) 136, 361, 408, 575, 1181
Hpy99I CGWCG 1 cut(s) 2075
HpyAV CCTTC 2 cut(s) 761, 1898
HpyCH4III ACNGT 6 cut(s) 329, 405, 579, 887, 1875, 1895
HpyCH4IV ACGT 2 cut(s) 1305, 1472
HpyF10VI GCNNNNNNNGC 8 cut(s) 155, 190, 712, 800, 944, 1565, 1574, 1967
HpySE526I ACGT 2 cut(s) 1305, 1472
Hsp92I GRCGYC 1 cut(s) 363
HspAI GCGC 3 cut(s) 182, 193, 1651
Kzo9I GATC 6 cut(s) 214, 664, 1311, 1408, 1513, 1552
LmnI GCTCC 4 cut(s) 703, 819, 1065, 1648
Lsp1109I GCAGC 9 cut(s) 503, 773, 790, 862, 934, 1369, 1675, 1758, 1918
MaeI CTAG 7 cut(s) 81, 294, 615, 962, 1100, 1634, 2027
MaeII ACGT 2 cut(s) 1305, 1472
MaeIII GTNAC 6 cut(s) 1259, 1707, 1735, 1760, 1834, 1875
MalI GATC 6 cut(s) 216, 666, 1313, 1410, 1515, 1554
MboI GATC 6 cut(s) 214, 664, 1311, 1408, 1513, 1552
MflI RGATCY 3 cut(s) 664, 1311, 1408
MhlI GDGCHC 2 cut(s) 816, 1183
MlsI TGGCCA 1 cut(s) 230
MluNI TGGCCA 1 cut(s) 230
MlyI GAGTC 4 cut(s) 397, 452, 1142, 1850
MmeI TCCRAC 2 cut(s) 27, 84
MnlI CCTC 7 cut(s) 304, 469, 694, 784, 802, 1450, 2078
Mox20I TGGCCA 1 cut(s) 230
Mph1103I ATGCAT 1 cut(s) 1469
MscI TGGCCA 1 cut(s) 230
MslI CAYNNNNRTG 4 cut(s) 413, 551, 972, 1823
Msp20I TGGCCA 1 cut(s) 230
MspA1I CMGCKG 2 cut(s) 1045, 1066
MspCI CTTAAG 1 cut(s) 1187
MspR9I CCNGG 3 cut(s) 818, 1862, 1972
Mva1269I GAATGC 4 cut(s) 805, 1078, 1330, 1807
MvaI CCWGG 3 cut(s) 818, 1862, 1972
MwoI GCNNNNNNNGC 8 cut(s) 155, 190, 712, 800, 944, 1565, 1574, 1967
NcoI CCATGG 3 cut(s) 552, 1638, 1680
NdeII GATC 6 cut(s) 214, 664, 1311, 1408, 1513, 1552
NlaIV GGNNCC 1 cut(s) 1887
NmuCI GTSAC 3 cut(s) 1760, 1834, 1875
NsiI ATGCAT 1 cut(s) 1469
NspI RCATGY 1 cut(s) 1673
OliI CACNNNNGTG 1 cut(s) 1823
PaeR7I CTCGAG 1 cut(s) 1286
PagI TCATGA 1 cut(s) 262
PciI ACATGT 1 cut(s) 1669
PctI GAATGC 4 cut(s) 805, 1078, 1330, 1807
PfeI GAWTC 8 cut(s) 86, 305, 434, 1052, 1091, 1149, 1282, 1602
PflFI GACNNNGTC 1 cut(s) 1840
PkrI GCNGC 9 cut(s) 493, 763, 805, 852, 949, 1359, 1665, 1748, 1933
PleI GAGTC 4 cut(s) 396, 451, 1141, 1849
PpsI GAGTC 4 cut(s) 396, 451, 1141, 1849
PscI ACATGT 1 cut(s) 1669
Psp6I CCWGG 3 cut(s) 816, 1860, 1970
PspGI CCWGG 3 cut(s) 816, 1860, 1970
PspN4I GGNNCC 1 cut(s) 1887
PstI CTGCAG 2 cut(s) 180, 852
PstNI CAGNNNCTG 2 cut(s) 856, 1451
PsuI RGATCY 3 cut(s) 664, 1311, 1408
PsyI GACNNNGTC 1 cut(s) 1840
PvuII CAGCTG 2 cut(s) 1045, 1066
RsaI GTAC 2 cut(s) 407, 599
RsaNI GTAC 2 cut(s) 406, 598
RseI CAYNNNNRTG 4 cut(s) 413, 551, 972, 1823
SatI GCNGC 9 cut(s) 492, 762, 804, 851, 948, 1358, 1664, 1747, 1932
Sau3AI GATC 6 cut(s) 214, 664, 1311, 1408, 1513, 1552
SchI GAGTC 4 cut(s) 397, 452, 1142, 1850
ScrFI CCNGG 3 cut(s) 818, 1862, 1972
SduI GDGCHC 2 cut(s) 816, 1183
SfcI CTRYAG 4 cut(s) 176, 513, 848, 1153
Sfr274I CTCGAG 1 cut(s) 1286
SlaI CTCGAG 1 cut(s) 1286
SmiMI CAYNNNNRTG 4 cut(s) 413, 551, 972, 1823
SmlI CTYRAG 3 cut(s) 668, 1187, 1286
SmoI CTYRAG 3 cut(s) 668, 1187, 1286
SsiI CCGC 2 cut(s) 234, 743
SspI AATATT 1 cut(s) 1535
SspMI CTAG 7 cut(s) 81, 294, 615, 962, 1100, 1634, 2027
StyD4I CCNGG 3 cut(s) 816, 1860, 1970
StyI CCWWGG 3 cut(s) 552, 1638, 1680
TaaI ACNGT 6 cut(s) 329, 405, 579, 887, 1875, 1895
TaiI ACGT 2 cut(s) 1308, 1475
TaqI TCGA 4 cut(s) 1287, 1555, 1799, 2070
TatI WGTACW 2 cut(s) 405, 597
TfiI GAWTC 8 cut(s) 86, 305, 434, 1052, 1091, 1149, 1282, 1602
TscAI CASTG 6 cut(s) 100, 461, 979, 1830, 1839, 1963
TseFI GTSAC 3 cut(s) 1760, 1834, 1875
TseI GCWGC 9 cut(s) 491, 761, 803, 850, 947, 1357, 1663, 1746, 1931
Tsp45I GTSAC 3 cut(s) 1760, 1834, 1875
TspGWI ACGGA 4 cut(s) 652, 1187, 1280, 1853
TspRI CASTG 6 cut(s) 100, 461, 979, 1830, 1839, 1963
Tth111I GACNNNGTC 1 cut(s) 1840
Vha464I CTTAAG 1 cut(s) 1187
VneI GTGCAC 1 cut(s) 1179
XapI RAATTY 2 cut(s) 859, 1237
XbaI TCTAGA 1 cut(s) 1099
XceI RCATGY 1 cut(s) 1673
XhoI CTCGAG 1 cut(s) 1286
XspI CTAG 7 cut(s) 81, 294, 615, 962, 1100, 1634, 2027
Zsp2I ATGCAT 1 cut(s) 1469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.