pycom13g04840

WPP domain-interacting tail-anchored protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
3224211 .. 3226426
2216 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g04840.4

Sequence Viewer

Length: 1650 bp
ATGGCCACCGCGAATGACTATATTCTGGCAGACTCTATTGAAAAAGTATTGGTATTCAATCTCCTGTCTAGCATTTTAGATTCTGAGGTCAGAGAGCTGGACAGCTACATGGATAATCTCCGGGTGGAAATTGTTGATGCGCATCCAAAAATATCTTCGTGCAGACACTTGGGAGAACTGTACTCTATAATGAAAGGAAAACTAAATGATTCTGAAGAATCACTAAAGCAATCTCGACAGCAGATTTCAGAGGTCAAGATGCAGTCAGAAAGGTTTCAGAGAACCGTTCTAGCTTTCGAGCATGAGAATTGGAAAACTGACATTGCCATGGATTTATCCGAGAATGCACAACTGTCGAATAAAAATGCAATGTCAAATTTAAGGATGCCTAGACAACAAAGACATAATCTATGGATGCTGGAGAAGTCTCTAACAAGGGAGCTATATCTTGAGAAGAAATTAGCTGAGTCAAGACAAAATGAAGAAGAACTTAAAGTGAAGCTACATCATACTGAACAGGTATCATTTCGCATGGAAGAAGCTGCGGAAGTTGTTTGGGGAAGATTTTTAGAGGCAGAGAATGCTGCTGAGGTTCTCCAGGGAATTTCGAAGGAGTTATTAGGTAGACTGCAGCTTGTTCATTTTAATCTGAACGGTTCAATTCAACGAGAAAGTGAGTTAAAATCCAAACTTCAAGCTAGTCTGGAAGAGCTTAGAGCAAAAGATACTGCTTTGCAGAAGCTCCACAATATCCTTGCCGAGAACATTAAGAAAGATGTTGAACTGTCTGCTTTGAGAGAAAAGGTGACGCTCCTTGAGAAACAGCTGAAAGAATCACAGCTCCAGTTGAAGAATGCAAATGCCACGAATGAATCAAGTGAAGAGAAACTTGGGGAAATGGAAAGTTTAGTTGCCTCTTTGAAAGGAAACATCTATGTAGCAGAAGTTAAGGCTGAGAATGCAGAACTTAAGGTTGCAGAATTAACAGGAACAAATATGGAACTCACCGAAGAGATGAGTTTTCTCAAAGGAAGTGCTACTGGCACAGAAAAAAAGGTTGGAAGTCTCGAGAAGCAGCTGAGGGAAGTAGAGATACAATTACAGCATGCCAAAGCATCCTCCGAAGCAAGTCAAGAACAGCAGAATATGTTATATGCTGCAATCTGGGATATGGAAACTTTAATTGAAGATCTGAAATCAAAGGTTTCCAAAGCAGAGATTAAGATAGAAAGTACTGAGGAGCAATGTATAATGTTATCTGAAACTAATGCAGAACTAAATGCGGAAATAACTGTTCTAAGGGATAGGGTGGAATACTTGGAATCGTCTTTGGATCAAGCTAACAATGCAAAACTTGCAAGTGCAGAAGAACTCAATTCCAGGATCAAGCTCATTATGGATATGGCAATGCAACTGGCCGTAGAAAGGGAGCGCATCCAAAATCAGATGCATGCCTTAACAATGAACAAAAAACTTCTGGTGGAGAAGATATGGAACACCAAAAAAGATGCAACTGAGTGCTGCAATAAACACATTGACAACAACGAGCTTCCGTCTTTCCAGTGTAATCCTCCAAGTGCTACTTCTATAAAAACATCCGTGGAAGATGTGACGTATTCTTTAGATAAAAGTTTCCAGGCAGGTGGATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

550

Amino Acids

62.45

Weight (kDa)

5.16

Isoelectric Point (pI)

49.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1631
Acc16I TGCGCA 1 cut(s) 141
Acc36I ACCTGC 1 cut(s) 1631
AccI GTMKAC 1 cut(s) 625
AccII CGCG 1 cut(s) 11
AciI CCGC 3 cut(s) 9, 545, 1283
AclWI GGATC 2 cut(s) 1341, 1391
AcoI YGGCCR 2 cut(s) 3, 1416
AcsI RAATTY 2 cut(s) 376, 603
AcuI CTGAAG 1 cut(s) 234
AfaI GTAC 2 cut(s) 182, 1234
AfiI CCNNNNNNNGG 1 cut(s) 1425
AflII CTTAAG 1 cut(s) 968
AgsI TTSAA 9 cut(s) 41, 58, 660, 665, 695, 782, 850, 922, 1187
AjnI CCWGG 3 cut(s) 597, 1379, 1635
AjuI GAANNNNNNNTTGG 8 cut(s) 139, 171, 873, 905, 1041, 1073, 1567, 1599
Alw26I GTCTC 2 cut(s) 432, 1070
AlwI GGATC 2 cut(s) 1341, 1391
Ama87I CYCGRG 1 cut(s) 1067
AoxI GGCC 2 cut(s) 3, 1416
ApeKI GCWGC 6 cut(s) 542, 584, 631, 1075, 1157, 1521
ApoI RAATTY 2 cut(s) 376, 603
Asp700I GAANNNNTTC 1 cut(s) 273
AspLEI GCGC 2 cut(s) 142, 1434
AsuC2I CCSGG 1 cut(s) 122
AsuHPI GGTGA 2 cut(s) 817, 997
AsuII TTCGAA 1 cut(s) 608
AvaI CYCGRG 1 cut(s) 1067
BalI TGGCCA 1 cut(s) 5
BarI GAAGNNNNNNTAC 2 cut(s) 1077, 1109
BbvCI CCTCAGC 2 cut(s) 588, 1079
BbvI GCAGC 6 cut(s) 529, 571, 643, 1087, 1144, 1508
BceAI ACGGC 1 cut(s) 1403
BcgI CGANNNNNNTGC 2 cut(s) 336, 370
BciT130I CCWGG 3 cut(s) 599, 1381, 1637
BcnI CCSGG 1 cut(s) 122
BcoDI GTCTC 2 cut(s) 432, 1070
BfaI CTAG 4 cut(s) 69, 290, 390, 699
BfmI CTRYAG 1 cut(s) 629
BfrI CTTAAG 1 cut(s) 968
BfuAI ACCTGC 1 cut(s) 1631
BglII AGATCT 1 cut(s) 1189
BisI GCNGC 6 cut(s) 543, 585, 632, 1076, 1158, 1522
BlsI GCNGC 6 cut(s) 544, 586, 633, 1077, 1159, 1523
BmcAI AGTACT 1 cut(s) 1234
Bme1390I CCNGG 4 cut(s) 122, 599, 1381, 1637
BmeT110I CYCGRG 1 cut(s) 1067
BmrFI CCNGG 4 cut(s) 122, 599, 1381, 1637
BmsI GCATC 9 cut(s) 127, 151, 249, 375, 405, 1124, 1437, 1443, 1498
BpmI CTGGAG 3 cut(s) 440, 581, 827
Bpu10I CCTNAGC 2 cut(s) 588, 1079
Bpu14I TTCGAA 1 cut(s) 608
BpuEI CTTGAG 2 cut(s) 470, 836
BpuMI CCSGG 1 cut(s) 122
BsaBI GATNNNNATC 1 cut(s) 141
BsaJI CCNNGG 3 cut(s) 327, 598, 1599
Bsc4I CCNNNNNNNGG 1 cut(s) 1425
Bse1I ACTGG 4 cut(s) 844, 1045, 1419, 1561
Bse3DI GCAATG 4 cut(s) 321, 375, 1250, 1413
Bse8I GATNNNNATC 1 cut(s) 141
BseBI CCWGG 3 cut(s) 599, 1381, 1637
BseDI CCNNGG 3 cut(s) 327, 598, 1599
BseGI GGATG 6 cut(s) 142, 390, 420, 1115, 1434, 1595
BseJI GATNNNNATC 1 cut(s) 141
BseLI CCNNNNNNNGG 1 cut(s) 1425
BseMI GCAATG 4 cut(s) 321, 375, 1250, 1413
BseMII CTCAG 7 cut(s) 75, 456, 579, 945, 1070, 1227, 1506
BseNI ACTGG 4 cut(s) 844, 1045, 1419, 1561
BseRI GAGGAG 1 cut(s) 1253
BseXI GCAGC 6 cut(s) 529, 571, 643, 1087, 1144, 1508
BsgI GTGCAG 2 cut(s) 181, 1383
Bsh1236I CGCG 1 cut(s) 11
BshFI GGCC 2 cut(s) 5, 1418
BsiHKCI CYCGRG 1 cut(s) 1067
BsiSI CCGG 1 cut(s) 121
BslI CCNNNNNNNGG 1 cut(s) 1425
BsmAI GTCTC 2 cut(s) 432, 1070
BsmI GAATGC 4 cut(s) 349, 586, 859, 964
BsnI GGCC 2 cut(s) 5, 1418
BsoBI CYCGRG 1 cut(s) 1067
Bsp119I TTCGAA 1 cut(s) 608
Bsp143I GATC 3 cut(s) 1189, 1333, 1383
Bsp19I CCATGG 1 cut(s) 327
BspACI CCGC 3 cut(s) 9, 545, 1283
BspANI GGCC 2 cut(s) 5, 1418
BspCNI CTCAG 7 cut(s) 76, 457, 580, 946, 1071, 1228, 1507
BspFNI CGCG 1 cut(s) 11
BspMAI CTGCAG 1 cut(s) 633
BspMI ACCTGC 1 cut(s) 1631
BspPI GGATC 2 cut(s) 1341, 1391
BspQI GCTCTTC 1 cut(s) 702
BspT104I TTCGAA 1 cut(s) 608
BspTI CTTAAG 1 cut(s) 968
BsrDI GCAATG 4 cut(s) 321, 375, 1250, 1413
BsrI ACTGG 4 cut(s) 844, 1045, 1419, 1561
BssECI CCNNGG 3 cut(s) 327, 598, 1599
BssMI GATC 3 cut(s) 1189, 1333, 1383
BssT1I CCWWGG 1 cut(s) 327
Bst2UI CCWGG 3 cut(s) 599, 1381, 1637
Bst4CI ACNGT 6 cut(s) 180, 286, 354, 656, 786, 1294
Bst6I CTCTTC 3 cut(s) 702, 876, 1005
BstAFI CTTAAG 1 cut(s) 968
BstAPI GCANNNNNTGC 2 cut(s) 581, 1355
BstBI TTCGAA 1 cut(s) 608
BstC8I GCNNGC 2 cut(s) 1107, 1452
BstDEI CTNAG 9 cut(s) 84, 465, 588, 713, 954, 1079, 1236, 1298, 1515
BstDSI CCRYGG 2 cut(s) 327, 1599
BstF5I GGATG 6 cut(s) 142, 390, 420, 1115, 1434, 1595
BstFNI CGCG 1 cut(s) 11
BstHHI GCGC 2 cut(s) 142, 1434
BstKTI GATC 3 cut(s) 1192, 1336, 1386
BstMAI GTCTC 2 cut(s) 432, 1070
BstMBI GATC 3 cut(s) 1189, 1333, 1383
BstMWI GCNNNNNNNGC 4 cut(s) 581, 959, 1346, 1355
BstNI CCWGG 3 cut(s) 599, 1381, 1637
BstNSI RCATGY 2 cut(s) 1109, 1454
BstSCI CCNGG 4 cut(s) 120, 597, 1379, 1635
BstSFI CTRYAG 1 cut(s) 629
BstUI CGCG 1 cut(s) 11
BstV1I GCAGC 6 cut(s) 529, 571, 643, 1087, 1144, 1508
BstX2I RGATCY 1 cut(s) 1189
BstXI CCANNNNNNTGG 1 cut(s) 1643
BstYI RGATCY 1 cut(s) 1189
BsuRI GGCC 2 cut(s) 5, 1418
BtgI CCRYGG 2 cut(s) 327, 1599
BtsCI GGATG 6 cut(s) 142, 390, 420, 1115, 1434, 1595
BtsIMutI CAGTG 1 cut(s) 1568
BveI ACCTGC 1 cut(s) 1631
Cac8I GCNNGC 2 cut(s) 1107, 1452
CfoI GCGC 2 cut(s) 142, 1434
CseI GACGC 1 cut(s) 817
Csp6I GTAC 2 cut(s) 181, 1233
CviAII CATG 6 cut(s) 109, 302, 328, 532, 1106, 1451
CviQI GTAC 2 cut(s) 181, 1233
DdeI CTNAG 9 cut(s) 84, 465, 588, 713, 954, 1079, 1236, 1298, 1515
DpnI GATC 3 cut(s) 1191, 1335, 1385
DpnII GATC 3 cut(s) 1189, 1333, 1383
EaeI YGGCCR 2 cut(s) 3, 1416
Eam1104I CTCTTC 3 cut(s) 702, 876, 1005
EarI CTCTTC 3 cut(s) 702, 876, 1005
Eco130I CCWWGG 1 cut(s) 327
Eco57I CTGAAG 1 cut(s) 234
Eco88I CYCGRG 1 cut(s) 1067
EcoRII CCWGG 3 cut(s) 597, 1379, 1635
EcoT14I CCWWGG 1 cut(s) 327
EcoT22I ATGCAT 1 cut(s) 1452
ErhI CCWWGG 1 cut(s) 327
FaeI CATG 6 cut(s) 112, 305, 331, 535, 1109, 1454
FalI AAGNNNNNCTT 6 cut(s) 474, 506, 873, 905, 1567, 1599
FatI CATG 6 cut(s) 108, 301, 327, 531, 1105, 1450
FblI GTMKAC 1 cut(s) 625
Fnu4HI GCNGC 6 cut(s) 543, 585, 632, 1076, 1158, 1522
FokI GGATG 6 cut(s) 129, 397, 427, 1102, 1421, 1582
Fsp4HI GCNGC 6 cut(s) 543, 585, 632, 1076, 1158, 1522
FspAI RTGCGCAY 1 cut(s) 141
FspBI CTAG 4 cut(s) 69, 290, 390, 699
FspI TGCGCA 1 cut(s) 141
GlaI GCGC 2 cut(s) 141, 1433
GluI GCNGC 6 cut(s) 543, 585, 632, 1076, 1158, 1522
GsuI CTGGAG 3 cut(s) 440, 581, 827
HaeIII GGCC 2 cut(s) 5, 1418
HapII CCGG 1 cut(s) 121
HgaI GACGC 1 cut(s) 817
HhaI GCGC 2 cut(s) 142, 1434
Hin1II CATG 6 cut(s) 112, 305, 331, 535, 1109, 1454
Hin6I GCGC 2 cut(s) 140, 1432
HinP1I GCGC 2 cut(s) 140, 1432
HinfI GANTC 8 cut(s) 32, 80, 209, 218, 467, 833, 872, 1322
HpaII CCGG 1 cut(s) 121
HphI GGTGA 2 cut(s) 817, 997
Hpy166II GTNNAC 1 cut(s) 626
Hpy188III TCNNGA 8 cut(s) 234, 256, 449, 471, 704, 1067, 1069, 1133
Hpy8I GTNNAC 1 cut(s) 626
HpyAV CCTTC 1 cut(s) 604
HpyCH4III ACNGT 6 cut(s) 180, 286, 354, 656, 786, 1294
HpyCH4IV ACGT 1 cut(s) 1613
HpyF10VI GCNNNNNNNGC 4 cut(s) 581, 959, 1346, 1355
HpyF3I CTNAG 9 cut(s) 84, 465, 588, 713, 954, 1079, 1236, 1298, 1515
HpySE526I ACGT 1 cut(s) 1613
Hsp92II CATG 6 cut(s) 112, 305, 331, 535, 1109, 1454
HspAI GCGC 2 cut(s) 140, 1432
Kzo9I GATC 3 cut(s) 1189, 1333, 1383
LguI GCTCTTC 1 cut(s) 702
LmnI GCTCC 6 cut(s) 439, 747, 816, 846, 1240, 1429
Lsp1109I GCAGC 6 cut(s) 529, 571, 643, 1087, 1144, 1508
LweI GCATC 9 cut(s) 127, 151, 249, 375, 405, 1124, 1437, 1443, 1498
MaeI CTAG 4 cut(s) 69, 290, 390, 699
MaeII ACGT 1 cut(s) 1613
MaeIII GTNAC 2 cut(s) 805, 1609
MalI GATC 3 cut(s) 1191, 1335, 1385
MboI GATC 3 cut(s) 1189, 1333, 1383
MflI RGATCY 1 cut(s) 1189
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 26, 476
MmeI TCCRAC 1 cut(s) 1039
MnlI CCTC 9 cut(s) 79, 244, 565, 583, 925, 1074, 1129, 1231, 1581
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 1452
MroXI GAANNNNTTC 1 cut(s) 273
MscI TGGCCA 1 cut(s) 5
MslI CAYNNNNRTG 1 cut(s) 326
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 2 cut(s) 826, 1078
MspCI CTTAAG 1 cut(s) 968
MspI CCGG 1 cut(s) 121
MspR9I CCNGG 4 cut(s) 122, 599, 1381, 1637
Mva1269I GAATGC 4 cut(s) 349, 586, 859, 964
MvaI CCWGG 3 cut(s) 599, 1381, 1637
MvnI CGCG 1 cut(s) 11
MwoI GCNNNNNNNGC 4 cut(s) 581, 959, 1346, 1355
NciI CCSGG 1 cut(s) 122
NcoI CCATGG 1 cut(s) 327
NdeII GATC 3 cut(s) 1189, 1333, 1383
NlaIII CATG 6 cut(s) 112, 305, 331, 535, 1109, 1454
NmeAIII GCCGAG 1 cut(s) 784
NmuCI GTSAC 2 cut(s) 805, 1609
NsbI TGCGCA 1 cut(s) 141
NsiI ATGCAT 1 cut(s) 1452
NspI RCATGY 2 cut(s) 1109, 1454
NspV TTCGAA 1 cut(s) 608
PaeI GCATGC 2 cut(s) 1109, 1454
PaeR7I CTCGAG 1 cut(s) 1067
PaqCI CACCTGC 1 cut(s) 1631
PciSI GCTCTTC 1 cut(s) 702
PctI GAATGC 4 cut(s) 349, 586, 859, 964
PdmI GAANNNNTTC 1 cut(s) 273
PfeI GAWTC 6 cut(s) 80, 209, 218, 833, 872, 1322
PfoI TCCNGGA 1 cut(s) 1379
PkrI GCNGC 6 cut(s) 544, 586, 633, 1077, 1159, 1523
PleI GAGTC 2 cut(s) 26, 475
PpsI GAGTC 2 cut(s) 26, 475
Psp6I CCWGG 3 cut(s) 597, 1379, 1635
PspGI CCWGG 3 cut(s) 597, 1379, 1635
PstI CTGCAG 1 cut(s) 633
PsuI RGATCY 1 cut(s) 1189
PvuII CAGCTG 2 cut(s) 826, 1078
RsaI GTAC 2 cut(s) 182, 1234
RsaNI GTAC 2 cut(s) 181, 1233
RseI CAYNNNNRTG 1 cut(s) 326
SapI GCTCTTC 1 cut(s) 702
SatI GCNGC 6 cut(s) 543, 585, 632, 1076, 1158, 1522
Sau3AI GATC 3 cut(s) 1189, 1333, 1383
ScaI AGTACT 1 cut(s) 1234
SchI GAGTC 2 cut(s) 26, 476
ScrFI CCNGG 4 cut(s) 122, 599, 1381, 1637
SfaNI GCATC 9 cut(s) 127, 151, 249, 375, 405, 1124, 1437, 1443, 1498
SfcI CTRYAG 1 cut(s) 629
Sfr274I CTCGAG 1 cut(s) 1067
SfuI TTCGAA 1 cut(s) 608
SlaI CTCGAG 1 cut(s) 1067
SmiMI CAYNNNNRTG 1 cut(s) 326
SmlI CTYRAG 4 cut(s) 449, 815, 968, 1067
SmoI CTYRAG 4 cut(s) 449, 815, 968, 1067
SphI GCATGC 2 cut(s) 1109, 1454
SsiI CCGC 3 cut(s) 9, 545, 1283
SspMI CTAG 4 cut(s) 69, 290, 390, 699
StyD4I CCNGG 4 cut(s) 120, 597, 1379, 1635
StyI CCWWGG 1 cut(s) 327
TaaI ACNGT 6 cut(s) 180, 286, 354, 656, 786, 1294
TaiI ACGT 1 cut(s) 1616
TaqI TCGA 5 cut(s) 235, 297, 356, 608, 1068
TatI WGTACW 2 cut(s) 180, 1232
TfiI GAWTC 6 cut(s) 80, 209, 218, 833, 872, 1322
TscAI CASTG 1 cut(s) 1568
TseFI GTSAC 2 cut(s) 805, 1609
TseI GCWGC 6 cut(s) 542, 584, 631, 1075, 1157, 1521
Tsp45I GTSAC 2 cut(s) 805, 1609
TspDTI ATGAA 5 cut(s) 206, 495, 629, 885, 1478
TspGWI ACGGA 2 cut(s) 1542, 1588
TspRI CASTG 1 cut(s) 1568
Vha464I CTTAAG 1 cut(s) 968
XapI RAATTY 2 cut(s) 376, 603
XceI RCATGY 2 cut(s) 1109, 1454
XhoI CTCGAG 1 cut(s) 1067
XmiI GTMKAC 1 cut(s) 625
XmnI GAANNNNTTC 1 cut(s) 273
XspI CTAG 4 cut(s) 69, 290, 390, 699
ZrmI AGTACT 1 cut(s) 1234
Zsp2I ATGCAT 1 cut(s) 1452
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.