AT1G70090

Belongs to the glycosyltransferase 8 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0015022
Physical Location & Seq
Forward (+)
26400694 .. 26402815
2122 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G70090.1

Sequence Viewer

Length: 1173 bp
ATGCGGTTGCGTTTTCCGATGAAATCTGCCGTTTTAGCGTTTGCTATCTTTCTGGTGTTTATTCCACTGTTTTCCGTCGGTATACGGATGATTCCGGGAAGACTCACCGCCGTATCCGCCACCGTCGGAAATGGCTTTGATCTGGGGTCGTTCGTGGAAGCTCCGGAGTACAGAAACGGCAAGGAGTGCGTGTCTCAATCGTTGAACAGAGAAAACTTCGTGTCGTCTTGCGACGCTTCGTTAGTTCATGTAGCTATGACGCTTGACTCGGAGTACTTACGTGGCTCAATCGCAGCCGTACATTCAATGCTCCGCCACGCGTCGTGTCCAGAAAACGTCTTCTTCCATCTCATCGCTGCAGAGTTTGACCCGGCGAGTCCACGCGTTCTGAGTCAACTCGTCCGATCTACTTTCCCGTCGCTAAACTTCAAAGTCTACATTTTCCGGGAAGATACGGTGATCAACCTTATCTCTTCTTCAATCAGACAAGCTTTAGAGAATCCATTGAACTATGCTCGGAACTACCTCGGAGATATTCTTGATCCATGCGTAGACAGAGTCATTTACCTAGACTCGGACATCATCGTCGTCGATGACATAACAAAGCTTTGGAACACGAGTTTGACAGGGTCAAGAATCATCGGAGCTCCGGAGTATTGTCACGCTAACTTCACAAAGTACTTCACTTCAGGTTTCTGGTCCGACCCGGCTTTACCCGGTTTCTTCTCGGGTCGAAAGCCTTGTTATTTCAACACGGGTGTGATGGTGATGGATCTAGTTAGATGGAGAGAAGGAAACTACAGAGAAAAGCTTGAAACTTGGATGCAGATACAGAAGAAGAAGAGAATCTACGATTTGGGTTCTTTGCCTCCGTTTCTTCTTGTCTTCGCAGGGAACGTTGAAGCAATTGATCATAGGTGGAACCAACATGGTTTAGGAGGAGACAATGTACGAGGAAGTTGTAGGTCTTTGCATAAAGGACCAGTGAGTTTGTTGCATTGGAGTGGTAAAGGTAAGCCATGGGTGAGACTTGATGAGAAGAGACCGTGTCCGTTGGATCATTTATGGGAACCGTATGATTTATATGAGCATAAGATTGAAAGAGCTAAAGATCAGTCTTTGTTCGGGTTCTCTTCTTTGTCTGAGTTAACAGAAGATTCAAGCTTTTTCTGA

Protein Analysis

390

Amino Acids

44.26

Weight (kDa)

7.16

Isoelectric Point (pI)

40.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 83 - 343 3.2e-54 Glycosyl transferase family 8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015022)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G70090 AT1G70090
fragaria_vesca FvH4_4g35260
prunus_persica Prupe.1G262000_v2.0.a1
pyrus_communis pycom13g07340 pycom16g07300
rosa_chinensis RchiOBHm_Chr4g0444871
rosa_laevigata RLG00000005793
rosa_multiflora Rmu_sc0006845.1_g000006
rosa_roxburghii Rroxscaffold_5G00385360
rosa_rugosa Rorug04G0355800
rosa_samantha Rh4AG417300 Rh4BG429100 Rh4CG443800 Rh4DG425000
rosa_wichuraiana Rw4G035770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 584
AccI GTMKAC 3 cut(s) 82, 435, 552
AccII CGCG 2 cut(s) 320, 384
AccIII TCCGGA 2 cut(s) 163, 649
AciI CCGC 4 cut(s) 4, 108, 117, 313
AclI AACGTT 1 cut(s) 897
AclWI GGATC 3 cut(s) 536, 780, 1065
AcuI CTGAAG 1 cut(s) 672
AfaI GTAC 5 cut(s) 170, 275, 300, 680, 951
AfiI CCNNNNNNNGG 1 cut(s) 574
AflIII ACRYGT 2 cut(s) 318, 382
AleI CACNNNNGTG 1 cut(s) 758
AluBI AGCT 8 cut(s) 161, 254, 491, 607, 647, 811, 1106, 1164
AluI AGCT 8 cut(s) 161, 254, 491, 607, 647, 811, 1106, 1164
Alw21I GWGCWC 1 cut(s) 649
Alw26I GTCTC 4 cut(s) 198, 936, 1021, 1036
AlwI GGATC 3 cut(s) 536, 780, 1065
Ama87I CYCGRG 1 cut(s) 727
Aor13HI TCCGGA 2 cut(s) 163, 649
ApeKI GCWGC 2 cut(s) 293, 356
AspS9I GGNCC 2 cut(s) 699, 980
AsuC2I CCSGG 5 cut(s) 96, 371, 446, 707, 717
AsuHPI GGTGA 4 cut(s) 97, 469, 778, 1036
AvaI CYCGRG 1 cut(s) 727
AvaII GGWCC 2 cut(s) 699, 980
BaeI ACNNNNGTAYC 2 cut(s) 96, 129
BanII GRGCYC 1 cut(s) 649
BarI GAAGNNNNNNTAC 2 cut(s) 833, 865
BauI CACGAG 1 cut(s) 616
BbsI GAAGAC 3 cut(s) 106, 331, 877
Bbv12I GWGCWC 1 cut(s) 649
BbvI GCAGC 2 cut(s) 305, 343
BccI CCATC 4 cut(s) 354, 757, 763, 777
BceAI ACGGC 4 cut(s) 14, 95, 193, 281
BciVI GTATCC 1 cut(s) 124
BclI TGATCA 2 cut(s) 459, 910
BcnI CCSGG 5 cut(s) 96, 371, 446, 707, 717
BcoDI GTCTC 4 cut(s) 198, 936, 1021, 1036
BfaI CTAG 2 cut(s) 569, 776
BfmI CTRYAG 2 cut(s) 357, 799
BfuI GTATCC 1 cut(s) 124
BisI GCNGC 2 cut(s) 294, 357
BlsI GCNGC 2 cut(s) 295, 358
BmcAI AGTACT 2 cut(s) 275, 680
Bme1390I CCNGG 5 cut(s) 96, 371, 446, 707, 717
Bme18I GGWCC 2 cut(s) 699, 980
BmeT110I CYCGRG 1 cut(s) 727
BmgT120I GGNCC 2 cut(s) 699, 980
BmiI GGNNCC 2 cut(s) 923, 1071
BmrFI CCNGG 5 cut(s) 96, 371, 446, 707, 717
BmsI GCATC 1 cut(s) 813
BpiI GAAGAC 3 cut(s) 106, 331, 877
BpuMI CCSGG 5 cut(s) 96, 371, 446, 707, 717
BsaAI YACGTR 1 cut(s) 281
BsaI GGTCTC 1 cut(s) 1036
BsaJI CCNNGG 2 cut(s) 526, 1019
BsaWI WCCGGW 2 cut(s) 163, 649
BsaXI ACNNNNNCTCC 4 cut(s) 176, 206, 933, 963
Bsc4I CCNNNNNNNGG 1 cut(s) 574
Bse1I ACTGG 1 cut(s) 983
BseAI TCCGGA 2 cut(s) 163, 649
BseDI CCNNGG 2 cut(s) 526, 1019
BseGI GGATG 2 cut(s) 93, 828
BseLI CCNNNNNNNGG 1 cut(s) 574
BseMII CTCAG 2 cut(s) 380, 1134
BseNI ACTGG 1 cut(s) 983
BseRI GAGGAG 1 cut(s) 954
BseXI GCAGC 2 cut(s) 305, 343
Bsh1236I CGCG 2 cut(s) 320, 384
BsiHKAI GWGCWC 1 cut(s) 649
BsiHKCI CYCGRG 1 cut(s) 727
BsiSI CCGG 7 cut(s) 95, 164, 371, 445, 650, 707, 717
BslI CCNNNNNNNGG 1 cut(s) 574
BsmAI GTCTC 4 cut(s) 198, 936, 1021, 1036
Bso31I GGTCTC 1 cut(s) 1036
BsoBI CYCGRG 1 cut(s) 727
Bsp1286I GDGCHC 1 cut(s) 649
Bsp13I TCCGGA 2 cut(s) 163, 649
Bsp143I GATC 8 cut(s) 139, 404, 459, 541, 772, 910, 1057, 1111
Bsp19I CCATGG 1 cut(s) 1019
BspACI CCGC 4 cut(s) 4, 108, 117, 313
BspCNI CTCAG 2 cut(s) 381, 1135
BspEI TCCGGA 2 cut(s) 163, 649
BspFNI CGCG 2 cut(s) 320, 384
BspLI GGNNCC 2 cut(s) 923, 1071
BspMAI CTGCAG 1 cut(s) 361
BspPI GGATC 3 cut(s) 536, 780, 1065
BspTNI GGTCTC 1 cut(s) 1036
BsrI ACTGG 1 cut(s) 983
BssECI CCNNGG 2 cut(s) 526, 1019
BssMI GATC 8 cut(s) 139, 404, 459, 541, 772, 910, 1057, 1111
BssNAI GTATAC 1 cut(s) 83
BssSI CACGAG 1 cut(s) 616
BssT1I CCWWGG 1 cut(s) 1019
Bst1107I GTATAC 1 cut(s) 83
Bst2BI CACGAG 1 cut(s) 616
Bst4CI ACNGT 5 cut(s) 69, 124, 457, 1047, 1074
Bst6I CTCTTC 4 cut(s) 478, 836, 1034, 1138
BstAPI GCANNNNNTGC 1 cut(s) 186
BstBAI YACGTR 1 cut(s) 281
BstDEI CTNAG 2 cut(s) 389, 1143
BstDSI CCRYGG 1 cut(s) 1019
BstF5I GGATG 2 cut(s) 93, 828
BstFNI CGCG 2 cut(s) 320, 384
BstKTI GATC 8 cut(s) 142, 407, 462, 544, 775, 913, 1060, 1114
BstMAI GTCTC 4 cut(s) 198, 936, 1021, 1036
BstMBI GATC 8 cut(s) 139, 404, 459, 541, 772, 910, 1057, 1111
BstMWI GCNNNNNNNGC 3 cut(s) 35, 116, 186
BstSCI CCNGG 5 cut(s) 94, 369, 444, 705, 715
BstSFI CTRYAG 2 cut(s) 357, 799
BstUI CGCG 2 cut(s) 320, 384
BstV1I GCAGC 2 cut(s) 305, 343
BstV2I GAAGAC 3 cut(s) 106, 331, 877
BstX2I RGATCY 1 cut(s) 772
BstYI RGATCY 1 cut(s) 772
BstZ17I GTATAC 1 cut(s) 83
BsuI GTATCC 1 cut(s) 124
BtgI CCRYGG 1 cut(s) 1019
BtgZI GCGATG 1 cut(s) 337
BtsCI GGATG 2 cut(s) 93, 828
BtsIMutI CAGTG 2 cut(s) 65, 990
Cfr13I GGNCC 2 cut(s) 699, 980
CseI GACGC 3 cut(s) 242, 268, 309
Csp6I GTAC 5 cut(s) 169, 274, 299, 679, 950
CviAII CATG 4 cut(s) 248, 546, 929, 1020
CviQI GTAC 5 cut(s) 169, 274, 299, 679, 950
DdeI CTNAG 2 cut(s) 389, 1143
DpnI GATC 8 cut(s) 141, 406, 461, 543, 774, 912, 1059, 1113
DpnII GATC 8 cut(s) 139, 404, 459, 541, 772, 910, 1057, 1111
DrdI GACNNNNNNGTC 1 cut(s) 584
DseDI GACNNNNNNGTC 1 cut(s) 584
Eam1104I CTCTTC 4 cut(s) 478, 836, 1034, 1138
EarI CTCTTC 4 cut(s) 478, 836, 1034, 1138
EciI GGCGGA 2 cut(s) 106, 302
Ecl136II GAGCTC 1 cut(s) 647
Eco130I CCWWGG 1 cut(s) 1019
Eco24I GRGCYC 1 cut(s) 649
Eco31I GGTCTC 1 cut(s) 1036
Eco47I GGWCC 2 cut(s) 699, 980
Eco53kI GAGCTC 1 cut(s) 647
Eco57I CTGAAG 1 cut(s) 672
Eco88I CYCGRG 1 cut(s) 727
EcoICRI GAGCTC 1 cut(s) 647
EcoT14I CCWWGG 1 cut(s) 1019
EcoT38I GRGCYC 1 cut(s) 649
ErhI CCWWGG 1 cut(s) 1019
FaeI CATG 4 cut(s) 251, 549, 932, 1023
FatI CATG 4 cut(s) 247, 545, 928, 1019
FbaI TGATCA 2 cut(s) 459, 910
FblI GTMKAC 3 cut(s) 82, 435, 552
Fnu4HI GCNGC 2 cut(s) 294, 357
FokI GGATG 2 cut(s) 100, 835
FriOI GRGCYC 1 cut(s) 649
Fsp4HI GCNGC 2 cut(s) 294, 357
FspBI CTAG 2 cut(s) 569, 776
GluI GCNGC 2 cut(s) 294, 357
HapII CCGG 7 cut(s) 95, 164, 371, 445, 650, 707, 717
HgaI GACGC 3 cut(s) 242, 268, 309
Hin1II CATG 4 cut(s) 251, 549, 932, 1023
HincII GTYRAC 2 cut(s) 395, 1149
HindII GTYRAC 2 cut(s) 395, 1149
HindIII AAGCTT 4 cut(s) 489, 605, 809, 1162
HpaI GTTAAC 1 cut(s) 1149
HpaII CCGG 7 cut(s) 95, 164, 371, 445, 650, 707, 717
HphI GGTGA 4 cut(s) 97, 469, 778, 1036
Hpy166II GTNNAC 6 cut(s) 83, 380, 395, 436, 553, 1149
Hpy188III TCNNGA 5 cut(s) 164, 329, 539, 633, 650
Hpy8I GTNNAC 6 cut(s) 83, 380, 395, 436, 553, 1149
Hpy99I CGWCG 7 cut(s) 80, 128, 236, 325, 421, 590, 593
HpyAV CCTTC 1 cut(s) 785
HpyCH4III ACNGT 5 cut(s) 69, 124, 457, 1047, 1074
HpyCH4IV ACGT 3 cut(s) 280, 336, 897
HpyCH4V TGCA 4 cut(s) 359, 826, 973, 997
HpyF10VI GCNNNNNNNGC 3 cut(s) 35, 116, 186
HpyF3I CTNAG 2 cut(s) 389, 1143
HpySE526I ACGT 3 cut(s) 280, 336, 897
Hsp92II CATG 4 cut(s) 251, 549, 932, 1023
Kpn2I TCCGGA 2 cut(s) 163, 649
Ksp22I TGATCA 2 cut(s) 459, 910
KspAI GTTAAC 1 cut(s) 1149
Kzo9I GATC 8 cut(s) 139, 404, 459, 541, 772, 910, 1057, 1111
LmnI GCTCC 4 cut(s) 166, 315, 644, 652
Lsp1109I GCAGC 2 cut(s) 305, 343
LweI GCATC 1 cut(s) 813
MaeI CTAG 2 cut(s) 569, 776
MaeII ACGT 3 cut(s) 280, 336, 897
MaeIII GTNAC 1 cut(s) 659
MalI GATC 8 cut(s) 141, 406, 461, 543, 774, 912, 1059, 1113
MboI GATC 8 cut(s) 139, 404, 459, 541, 772, 910, 1057, 1111
MfeI CAATTG 1 cut(s) 906
MflI RGATCY 1 cut(s) 772
MhlI GDGCHC 1 cut(s) 649
MluCI AATT 1 cut(s) 906
MluI ACGCGT 2 cut(s) 318, 382
MlyI GAGTC 6 cut(s) 96, 260, 385, 400, 566, 567
MmeI TCCRAC 3 cut(s) 106, 726, 1035
MnlI CCTC 4 cut(s) 536, 879, 932, 947
MroI TCCGGA 2 cut(s) 163, 649
MseI TTAA 1 cut(s) 1148
MslI CAYNNNNRTG 2 cut(s) 758, 1002
MspI CCGG 7 cut(s) 95, 164, 371, 445, 650, 707, 717
MspR9I CCNGG 5 cut(s) 96, 371, 446, 707, 717
MunI CAATTG 1 cut(s) 906
MvnI CGCG 2 cut(s) 320, 384
MwoI GCNNNNNNNGC 3 cut(s) 35, 116, 186
NciI CCSGG 5 cut(s) 96, 371, 446, 707, 717
NcoI CCATGG 1 cut(s) 1019
NdeII GATC 8 cut(s) 139, 404, 459, 541, 772, 910, 1057, 1111
NlaIII CATG 4 cut(s) 251, 549, 932, 1023
NlaIV GGNNCC 2 cut(s) 923, 1071
NmuCI GTSAC 1 cut(s) 659
OliI CACNNNNGTG 1 cut(s) 758
PcsI WCGNNNNNNNCGW 1 cut(s) 894
PfeI GAWTC 5 cut(s) 91, 499, 636, 846, 1157
PflFI GACNNNGTC 3 cut(s) 557, 628, 1047
PfoI TCCNGGA 2 cut(s) 94, 444
PkrI GCNGC 2 cut(s) 295, 358
PleI GAGTC 6 cut(s) 96, 260, 384, 399, 566, 566
PpsI GAGTC 6 cut(s) 96, 260, 384, 399, 566, 566
Ppu21I YACGTR 1 cut(s) 281
Psp124BI GAGCTC 1 cut(s) 649
Psp1406I AACGTT 1 cut(s) 897
PspN4I GGNNCC 2 cut(s) 923, 1071
PspPI GGNCC 2 cut(s) 699, 980
PstI CTGCAG 1 cut(s) 361
PsuI RGATCY 1 cut(s) 772
PsyI GACNNNGTC 3 cut(s) 557, 628, 1047
RsaI GTAC 5 cut(s) 170, 275, 300, 680, 951
RsaNI GTAC 5 cut(s) 169, 274, 299, 679, 950
RseI CAYNNNNRTG 2 cut(s) 758, 1002
SacI GAGCTC 1 cut(s) 649
SaqAI TTAA 1 cut(s) 1148
SatI GCNGC 2 cut(s) 294, 357
Sau3AI GATC 8 cut(s) 139, 404, 459, 541, 772, 910, 1057, 1111
Sau96I GGNCC 2 cut(s) 699, 980
ScaI AGTACT 2 cut(s) 275, 680
SchI GAGTC 6 cut(s) 96, 260, 385, 400, 566, 567
ScrFI CCNGG 5 cut(s) 96, 371, 446, 707, 717
SduI GDGCHC 1 cut(s) 649
SfaNI GCATC 1 cut(s) 813
SfcI CTRYAG 2 cut(s) 357, 799
SinI GGWCC 2 cut(s) 699, 980
SmiMI CAYNNNNRTG 2 cut(s) 758, 1002
Sse9I AATT 1 cut(s) 906
SsiI CCGC 4 cut(s) 4, 108, 117, 313
SspMI CTAG 2 cut(s) 569, 776
SstI GAGCTC 1 cut(s) 649
StyD4I CCNGG 5 cut(s) 94, 369, 444, 705, 715
StyI CCWWGG 1 cut(s) 1019
TaaI ACNGT 5 cut(s) 69, 124, 457, 1047, 1074
TaiI ACGT 3 cut(s) 283, 339, 900
TaqI TCGA 2 cut(s) 591, 733
TasI AATT 1 cut(s) 906
TatI WGTACW 3 cut(s) 168, 273, 678
TfiI GAWTC 5 cut(s) 91, 499, 636, 846, 1157
Tru1I TTAA 1 cut(s) 1148
Tru9I TTAA 1 cut(s) 1148
TscAI CASTG 2 cut(s) 72, 990
TseFI GTSAC 1 cut(s) 659
TseI GCWGC 2 cut(s) 293, 356
Tsp45I GTSAC 1 cut(s) 659
TspDTI ATGAA 2 cut(s) 35, 236
TspGWI ACGGA 4 cut(s) 64, 100, 861, 1041
TspRI CASTG 2 cut(s) 72, 990
Tth111I GACNNNGTC 3 cut(s) 557, 628, 1047
VpaK11BI GGWCC 2 cut(s) 699, 980
XmiI GTMKAC 3 cut(s) 82, 435, 552
XspI CTAG 2 cut(s) 569, 776
ZrmI AGTACT 2 cut(s) 275, 680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.