Prupe.1G262000_v2.0.a1

Belongs to the glycosyltransferase 8 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0015022
Physical Location & Seq
Reverse (-)
27066052 .. 27067783
1732 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G262000.1

Sequence Viewer

Length: 1173 bp
ATGCTCCCATTCCGGCTATACGCCGCCGTTTTGTTCGTCCTCAGTATCTCCCTCCTCTTCCCTCCGTTCTGCATCGGGATTCGCTCCTTCCCGACCAGGGCGATCGACGGCGGAGATGCCTTCGAACTCGCCTCCGCCGCCTGGGCGAGATTCTCTGAGGCGCCGGATTACCGTAACGGAGCAGACTGCGCCGTTTCGATGAACAAGGAAATGGTGTCCTCCTGCGACCCATCCCTGGTCCACATCGCCATGACTCTCGACTCCGAGTATCTCAGAGGCTCCGTAGCTGCTGTACACTCGGTTCTCAAGCACGCTTCTTGCCCCGAGAACGTCTTCTTCCATTTCATCGCCGCCGAGTTCGACCCGGCGAGTCCGCGGGTCCTGACCCAACTCGTCCGATCTACCTTCCCCTCCCTCAATTTCAAGGTCTACATCTTCCGGGAAGACACCGTCATTAATCTCATCTCGTCTTCTATTCGGCAGGCGCTCGAGAACCCGCTCAACTACGCCAGAAATTACCTGGGCGATATTTTGGGGCGGTGCGTGGACCGGGTCATTTACTTGGACTCGGATGTGCTGGTGGTCGACGACATTCACAAGCTCTGGAACATTTCGCTCTCCGGGTTGCGGGTTATCGGAGCCCCGGAGTACTGCCACGCCAACTTCACTAAGTATTTCACCGACGGGTTCTGGTCCGACCCGGTTCTTTCCCGGGTCTTTTCCTCAAGAAAGCCCTGCTACTTCAACACTGGGGTGATGGTGATGGACTTGGTGAGGTGGAGACAGGGAAATTACAGAAAGAGGATTGAGAACTGGATGGAGTTGCAGAGAAAGAGAAGGATTTACGATTTGGGTTCTTTGCCACCATTTTTGCTGGTTTTTGCCGGGAACGTGGAGGCCATAGACCACAGGTGGAACCAGCACGGGCTTGGTGGCGACAATGTCAGAGGGAGCTGCAGGTCTCTTCACCCTGGTCCAGTGAGTTTGCTACATTGGAGTGGCAAAGGCAAGCCTTGGGTTAGGCTTGAATCCAAGAACCCTTGTCCGCTTGACCATCTTTGGGAGCCTTACGATCTTTACAAGCCGCTCCGTCATCACAACGCAGCAAAGTTCCAAGCTTTATCGTCGATTTCTGCTTCTACATTGATTGGGTTTTCCAGCTATTTGTCATGA

Protein Analysis

391

Amino Acids

44.15

Weight (kDa)

8.66

Isoelectric Point (pI)

47.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015022)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G70090 AT1G70090
fragaria_vesca FvH4_4g35260
prunus_persica Prupe.1G262000_v2.0.a1
pyrus_communis pycom13g07340 pycom16g07300
rosa_chinensis RchiOBHm_Chr4g0444871
rosa_laevigata RLG00000005793
rosa_multiflora Rmu_sc0006845.1_g000006
rosa_roxburghii Rroxscaffold_5G00385360
rosa_rugosa Rorug04G0355800
rosa_samantha Rh4AG417300 Rh4BG429100 Rh4CG443800 Rh4DG425000
rosa_wichuraiana Rw4G035770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 948
AccB1I GGYRCC 1 cut(s) 160
AccBSI CCGCTC 2 cut(s) 499, 1087
AccI GTMKAC 2 cut(s) 429, 585
AccII CGCG 1 cut(s) 376
AcyI GRCGYC 1 cut(s) 161
AfaI GTAC 2 cut(s) 294, 650
AfiI CCNNNNNNNGG 5 cut(s) 97, 141, 235, 627, 1060
AgsI TTSAA 3 cut(s) 424, 745, 1028
AjnI CCWGG 5 cut(s) 95, 140, 234, 519, 970
AleI CACNNNNGTG 1 cut(s) 752
AluBI AGCT 5 cut(s) 287, 601, 954, 1118, 1161
AluI AGCT 5 cut(s) 287, 601, 954, 1118, 1161
Alw26I GTCTC 2 cut(s) 775, 966
Ama87I CYCGRG 3 cut(s) 323, 488, 711
AoxI GGCC 1 cut(s) 897
ApeKI GCWGC 3 cut(s) 287, 954, 1103
AseI ATTAAT 1 cut(s) 456
Asp700I GAANNNNTTC 1 cut(s) 332
AspLEI GCGC 3 cut(s) 163, 191, 487
AspS9I GGNCC 5 cut(s) 238, 379, 547, 693, 974
AsuC2I CCSGG 9 cut(s) 365, 440, 551, 622, 644, 701, 712, 713, 886
AsuHPI GGTGA 5 cut(s) 670, 766, 772, 784, 959
AsuII TTCGAA 1 cut(s) 123
AvaI CYCGRG 3 cut(s) 323, 488, 711
AvaII GGWCC 5 cut(s) 238, 379, 547, 693, 974
BanI GGYRCC 1 cut(s) 160
BanII GRGCYC 1 cut(s) 643
BbsI GAAGAC 3 cut(s) 325, 450, 462
BbvI GCAGC 3 cut(s) 274, 941, 1115
BccI CCATC 5 cut(s) 238, 751, 757, 811, 1062
BceAI ACGGC 3 cut(s) 11, 124, 176
BciT130I CCWGG 5 cut(s) 97, 142, 236, 521, 972
BcnI CCSGG 9 cut(s) 365, 440, 551, 622, 644, 701, 712, 713, 886
BcoDI GTCTC 2 cut(s) 775, 966
BfmI CTRYAG 1 cut(s) 955
BfoI RGCGCY 2 cut(s) 164, 488
BfuAI ACCTGC 1 cut(s) 948
BglI GCCNNNNNGGC 1 cut(s) 143
BisI GCNGC 7 cut(s) 24, 138, 288, 351, 955, 1085, 1104
BlsI GCNGC 7 cut(s) 25, 139, 289, 352, 956, 1086, 1105
BmcAI AGTACT 1 cut(s) 650
Bme18I GGWCC 5 cut(s) 238, 379, 547, 693, 974
BmeT110I CYCGRG 3 cut(s) 323, 488, 711
BmgT120I GGNCC 5 cut(s) 238, 379, 547, 693, 974
BmiI GGNNCC 6 cut(s) 162, 280, 380, 640, 917, 1065
BmrI ACTGGG 1 cut(s) 759
BmsI GCATC 2 cut(s) 81, 106
BmuI ACTGGG 1 cut(s) 759
BpiI GAAGAC 3 cut(s) 325, 450, 462
Bpu14I TTCGAA 1 cut(s) 123
BpuEI CTTGAG 2 cut(s) 290, 709
BpuMI CCSGG 9 cut(s) 365, 440, 551, 622, 644, 701, 712, 713, 886
BsaHI GRCGYC 1 cut(s) 161
BsaI GGTCTC 1 cut(s) 966
BsaJI CCNNGG 9 cut(s) 96, 141, 234, 374, 520, 642, 711, 970, 1013
Bsc4I CCNNNNNNNGG 5 cut(s) 97, 141, 235, 627, 1060
Bse1I ACTGG 3 cut(s) 754, 818, 977
BseBI CCWGG 5 cut(s) 97, 142, 236, 521, 972
BseDI CCNNGG 9 cut(s) 96, 141, 234, 374, 520, 642, 711, 970, 1013
BseGI GGATG 3 cut(s) 230, 577, 822
BseLI CCNNNNNNNGG 5 cut(s) 97, 141, 235, 627, 1060
BseMII CTCAG 3 cut(s) 55, 147, 286
BseNI ACTGG 3 cut(s) 754, 818, 977
BseRI GAGGAG 1 cut(s) 44
BseXI GCAGC 3 cut(s) 274, 941, 1115
Bsh1236I CGCG 1 cut(s) 376
Bsh1285I CGRYCG 1 cut(s) 105
BshFI GGCC 1 cut(s) 899
BshNI GGYRCC 1 cut(s) 160
BsiEI CGRYCG 1 cut(s) 105
BsiHKCI CYCGRG 3 cut(s) 323, 488, 711
BslI CCNNNNNNNGG 5 cut(s) 97, 141, 235, 627, 1060
BsmAI GTCTC 2 cut(s) 775, 966
BsnI GGCC 1 cut(s) 899
Bso31I GGTCTC 1 cut(s) 966
BsoBI CYCGRG 3 cut(s) 323, 488, 711
Bsp119I TTCGAA 1 cut(s) 123
Bsp1286I GDGCHC 1 cut(s) 643
Bsp1407I TGTACA 1 cut(s) 292
Bsp143I GATC 3 cut(s) 102, 398, 1072
BspANI GGCC 1 cut(s) 899
BspCNI CTCAG 3 cut(s) 54, 148, 285
BspFNI CGCG 1 cut(s) 376
BspHI TCATGA 1 cut(s) 1169
BspLI GGNNCC 6 cut(s) 162, 280, 380, 640, 917, 1065
BspMAI CTGCAG 1 cut(s) 959
BspMI ACCTGC 1 cut(s) 948
BspT104I TTCGAA 1 cut(s) 123
BspT107I GGYRCC 1 cut(s) 160
BspTNI GGTCTC 1 cut(s) 966
BsrBI CCGCTC 2 cut(s) 499, 1087
BsrGI TGTACA 1 cut(s) 292
BsrI ACTGG 3 cut(s) 754, 818, 977
BssECI CCNNGG 9 cut(s) 96, 141, 234, 374, 520, 642, 711, 970, 1013
BssMI GATC 3 cut(s) 102, 398, 1072
BssNI GRCGYC 1 cut(s) 161
BssT1I CCWWGG 1 cut(s) 1013
Bst2UI CCWGG 5 cut(s) 97, 142, 236, 521, 972
Bst4CI ACNGT 2 cut(s) 173, 451
Bst6I CTCTTC 2 cut(s) 62, 969
BstACI GRCGYC 1 cut(s) 161
BstAUI TGTACA 1 cut(s) 292
BstBI TTCGAA 1 cut(s) 123
BstC8I GCNNGC 3 cut(s) 312, 483, 1010
BstDEI CTNAG 4 cut(s) 41, 156, 272, 669
BstDSI CCRYGG 1 cut(s) 374
BstF5I GGATG 3 cut(s) 230, 577, 822
BstFNI CGCG 1 cut(s) 376
BstH2I RGCGCY 2 cut(s) 164, 488
BstHHI GCGC 3 cut(s) 163, 191, 487
BstKTI GATC 3 cut(s) 105, 401, 1075
BstMAI GTCTC 2 cut(s) 775, 966
BstMBI GATC 3 cut(s) 102, 398, 1072
BstMCI CGRYCG 1 cut(s) 105
BstMWI GCNNNNNNNGC 3 cut(s) 137, 143, 188
BstNI CCWGG 5 cut(s) 97, 142, 236, 521, 972
BstSFI CTRYAG 1 cut(s) 955
BstUI CGCG 1 cut(s) 376
BstV1I GCAGC 3 cut(s) 274, 941, 1115
BstV2I GAAGAC 3 cut(s) 325, 450, 462
BsuRI GGCC 1 cut(s) 899
BtgI CCRYGG 1 cut(s) 374
BtgZI GCGATG 2 cut(s) 229, 331
BtsCI GGATG 3 cut(s) 230, 577, 822
BtsIMutI CAGTG 2 cut(s) 747, 984
BveI ACCTGC 1 cut(s) 948
Cac8I GCNNGC 3 cut(s) 312, 483, 1010
CciI TCATGA 1 cut(s) 1169
CfoI GCGC 3 cut(s) 163, 191, 487
Cfr13I GGNCC 5 cut(s) 238, 379, 547, 693, 974
Cfr42I CCGCGG 1 cut(s) 377
Cfr9I CCCGGG 1 cut(s) 711
Csp6I GTAC 2 cut(s) 293, 649
CspCI CAANNNNNGTGG 2 cut(s) 852, 887
CviAII CATG 2 cut(s) 250, 1170
CviQI GTAC 2 cut(s) 293, 649
DdeI CTNAG 4 cut(s) 41, 156, 272, 669
DinI GGCGCC 1 cut(s) 162
DpnI GATC 3 cut(s) 104, 400, 1074
DpnII GATC 3 cut(s) 102, 398, 1072
Eam1104I CTCTTC 2 cut(s) 62, 969
EarI CTCTTC 2 cut(s) 62, 969
EciI GGCGGA 2 cut(s) 124, 126
Eco130I CCWWGG 1 cut(s) 1013
Eco24I GRGCYC 1 cut(s) 643
Eco31I GGTCTC 1 cut(s) 966
Eco47I GGWCC 5 cut(s) 238, 379, 547, 693, 974
Eco88I CYCGRG 3 cut(s) 323, 488, 711
EcoO109I RGGNCCY 1 cut(s) 379
EcoRII CCWGG 5 cut(s) 95, 140, 234, 519, 970
EcoT14I CCWWGG 1 cut(s) 1013
EcoT38I GRGCYC 1 cut(s) 643
EgeI GGCGCC 1 cut(s) 162
EheI GGCGCC 1 cut(s) 162
ErhI CCWWGG 1 cut(s) 1013
FaeI CATG 2 cut(s) 253, 1173
FaiI YATR 4 cut(s) 19, 251, 902, 1171
FatI CATG 2 cut(s) 249, 1169
FauI CCCGC 3 cut(s) 369, 504, 621
FblI GTMKAC 2 cut(s) 429, 585
Fnu4HI GCNGC 7 cut(s) 24, 138, 288, 351, 955, 1085, 1104
FokI GGATG 3 cut(s) 217, 584, 829
FriOI GRGCYC 1 cut(s) 643
Fsp4HI GCNGC 7 cut(s) 24, 138, 288, 351, 955, 1085, 1104
GlaI GCGC 3 cut(s) 162, 190, 486
GluI GCNGC 7 cut(s) 24, 138, 288, 351, 955, 1085, 1104
HaeII RGCGCY 2 cut(s) 164, 488
HaeIII GGCC 1 cut(s) 899
HhaI GCGC 3 cut(s) 163, 191, 487
Hin1I GRCGYC 1 cut(s) 161
Hin1II CATG 2 cut(s) 253, 1173
Hin6I GCGC 3 cut(s) 161, 189, 485
HinP1I GCGC 3 cut(s) 161, 189, 485
HincII GTYRAC 1 cut(s) 586
HindII GTYRAC 1 cut(s) 586
HindIII AAGCTT 1 cut(s) 1116
HinfI GANTC 7 cut(s) 79, 150, 253, 260, 370, 566, 1028
HphI GGTGA 5 cut(s) 670, 766, 772, 784, 959
Hpy166II GTNNAC 5 cut(s) 241, 295, 430, 547, 586
Hpy188I TCNGA 8 cut(s) 157, 265, 275, 398, 571, 638, 697, 947
Hpy188III TCNNGA 8 cut(s) 76, 91, 257, 382, 490, 604, 726, 1170
Hpy8I GTNNAC 5 cut(s) 241, 295, 430, 547, 586
Hpy99I CGWCG 4 cut(s) 110, 590, 686, 1129
HpyAV CCTTC 4 cut(s) 97, 130, 415, 831
HpyCH4III ACNGT 2 cut(s) 173, 451
HpyCH4IV ACGT 2 cut(s) 330, 891
HpyCH4V TGCA 3 cut(s) 72, 826, 957
HpyF10VI GCNNNNNNNGC 3 cut(s) 137, 143, 188
HpyF3I CTNAG 4 cut(s) 41, 156, 272, 669
HpySE526I ACGT 2 cut(s) 330, 891
Hsp92I GRCGYC 1 cut(s) 161
Hsp92II CATG 2 cut(s) 253, 1173
HspAI GCGC 3 cut(s) 161, 189, 485
KasI GGCGCC 1 cut(s) 160
KspI CCGCGG 1 cut(s) 377
Kzo9I GATC 3 cut(s) 102, 398, 1072
LmnI GCTCC 8 cut(s) 9, 89, 179, 284, 638, 951, 1063, 1092
Lsp1109I GCAGC 3 cut(s) 274, 941, 1115
LweI GCATC 2 cut(s) 81, 106
MaeII ACGT 2 cut(s) 330, 891
MaeIII GTNAC 1 cut(s) 173
MalI GATC 3 cut(s) 104, 400, 1074
MbiI CCGCTC 2 cut(s) 499, 1087
MboI GATC 3 cut(s) 102, 398, 1072
MboII GAAGA 7 cut(s) 49, 325, 328, 427, 455, 462, 956
MhlI GDGCHC 1 cut(s) 643
MluCI AATT 3 cut(s) 418, 514, 790
Mly113I GGCGCC 1 cut(s) 161
MlyI GAGTC 4 cut(s) 247, 254, 379, 560
MmeI TCCRAC 1 cut(s) 720
MroXI GAANNNNTTC 1 cut(s) 332
MseI TTAA 1 cut(s) 456
MslI CAYNNNNRTG 3 cut(s) 248, 752, 996
MspA1I CMGCKG 1 cut(s) 376
MvaI CCWGG 5 cut(s) 97, 142, 236, 521, 972
MvnI CGCG 1 cut(s) 376
MwoI GCNNNNNNNGC 3 cut(s) 137, 143, 188
NarI GGCGCC 1 cut(s) 161
NciI CCSGG 9 cut(s) 365, 440, 551, 622, 644, 701, 712, 713, 886
NdeII GATC 3 cut(s) 102, 398, 1072
NlaIII CATG 2 cut(s) 253, 1173
NlaIV GGNNCC 6 cut(s) 162, 280, 380, 640, 917, 1065
NmeAIII GCCGAG 1 cut(s) 379
NspV TTCGAA 1 cut(s) 123
OliI CACNNNNGTG 1 cut(s) 752
PaeR7I CTCGAG 1 cut(s) 488
PagI TCATGA 1 cut(s) 1169
PdmI GAANNNNTTC 1 cut(s) 332
PfeI GAWTC 3 cut(s) 79, 150, 1028
PflFI GACNNNGTC 3 cut(s) 449, 551, 941
PfoI TCCNGGA 1 cut(s) 438
PkrI GCNGC 7 cut(s) 25, 139, 289, 352, 956, 1086, 1105
Ple19I CGATCG 1 cut(s) 105
PleI GAGTC 4 cut(s) 247, 254, 378, 560
PluTI GGCGCC 1 cut(s) 164
PpsI GAGTC 4 cut(s) 247, 254, 378, 560
PpuMI RGGWCCY 1 cut(s) 379
PshBI ATTAAT 1 cut(s) 456
Psp5II RGGWCCY 1 cut(s) 379
Psp6I CCWGG 5 cut(s) 95, 140, 234, 519, 970
PspGI CCWGG 5 cut(s) 95, 140, 234, 519, 970
PspN4I GGNNCC 6 cut(s) 162, 280, 380, 640, 917, 1065
PspPI GGNCC 5 cut(s) 238, 379, 547, 693, 974
PspPPI RGGWCCY 1 cut(s) 379
PsrI GAACNNNNNNTAC 2 cut(s) 285, 317
PstI CTGCAG 1 cut(s) 959
PsyI GACNNNGTC 3 cut(s) 449, 551, 941
PvuI CGATCG 1 cut(s) 105
RsaI GTAC 2 cut(s) 294, 650
RsaNI GTAC 2 cut(s) 293, 649
RseI CAYNNNNRTG 3 cut(s) 248, 752, 996
SacII CCGCGG 1 cut(s) 377
SalI GTCGAC 1 cut(s) 584
SaqAI TTAA 1 cut(s) 456
SatI GCNGC 7 cut(s) 24, 138, 288, 351, 955, 1085, 1104
Sau3AI GATC 3 cut(s) 102, 398, 1072
Sau96I GGNCC 5 cut(s) 238, 379, 547, 693, 974
ScaI AGTACT 1 cut(s) 650
SchI GAGTC 4 cut(s) 247, 254, 379, 560
SduI GDGCHC 1 cut(s) 643
SfaNI GCATC 2 cut(s) 81, 106
SfcI CTRYAG 1 cut(s) 955
SfoI GGCGCC 1 cut(s) 162
Sfr274I CTCGAG 1 cut(s) 488
Sfr303I CCGCGG 1 cut(s) 377
SfuI TTCGAA 1 cut(s) 123
SgrBI CCGCGG 1 cut(s) 377
SinI GGWCC 5 cut(s) 238, 379, 547, 693, 974
SlaI CTCGAG 1 cut(s) 488
SmaI CCCGGG 1 cut(s) 713
SmiMI CAYNNNNRTG 3 cut(s) 248, 752, 996
SmlI CTYRAG 3 cut(s) 305, 488, 724
SmoI CTYRAG 3 cut(s) 305, 488, 724
Sse9I AATT 3 cut(s) 418, 514, 790
SspDI GGCGCC 1 cut(s) 160
StyI CCWWGG 1 cut(s) 1013
TaaI ACNGT 2 cut(s) 173, 451
TaiI ACGT 2 cut(s) 333, 894
TaqI TCGA 8 cut(s) 105, 123, 197, 258, 360, 489, 585, 1127
TasI AATT 3 cut(s) 418, 514, 790
TatI WGTACW 2 cut(s) 292, 648
TauI GCSGC 4 cut(s) 26, 140, 353, 1087
TfiI GAWTC 3 cut(s) 79, 150, 1028
Tru1I TTAA 1 cut(s) 456
Tru9I TTAA 1 cut(s) 456
TscAI CASTG 2 cut(s) 754, 984
TseI GCWGC 3 cut(s) 287, 954, 1103
TspDTI ATGAA 2 cut(s) 215, 334
TspGWI ACGGA 4 cut(s) 54, 192, 271, 1079
TspMI CCCGGG 1 cut(s) 711
TspRI CASTG 2 cut(s) 754, 984
Tth111I GACNNNGTC 3 cut(s) 449, 551, 941
VpaK11BI GGWCC 5 cut(s) 238, 379, 547, 693, 974
VspI ATTAAT 1 cut(s) 456
XcmI CCANNNNNNNNNTGG 2 cut(s) 517, 926
XhoI CTCGAG 1 cut(s) 488
XmaI CCCGGG 1 cut(s) 711
XmiI GTMKAC 2 cut(s) 429, 585
XmnI GAANNNNTTC 1 cut(s) 332
ZrmI AGTACT 1 cut(s) 650
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.