AT1G70170

Zinc-dependent metalloprotease

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
26423874 .. 26425356
1483 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G70170.1

Sequence Viewer

Length: 1137 bp
ATGAGGTTTTGTGTTTTCGGGTTTTTATCGCTTTTCTTGATTGTTTCTCCTGCCTCCGCCTGGTTCTTCCCTAACTCCACCGCGGTACCACCGTCTCTACGTAACACTACACGTGTTTTCTGGGACGCTTTCTCCAATTTCACCGGTTGTCACCACGGCCAAAACGTTGATGGTCTCTACCGTATCAAAAAATACTTCCAACGTTTTGGTTACATCCCTGAAACGTTTTCGGGAAATTTCACCGATGATTTTGATGATATCCTCAAAGCCGCTGTCGAATTGTATCAGACGAATTTCAATCTTAACGTTACCGGTGAGCTTGATGCGCTTACCATTCAACACATCGTGATCCCGCGTTGCGGTAATCCTGACGTGGTCAACGGTACTTCGTTGATGCATGGCGGGAGAAGAAAGACCTTCGAGGTCAACTTCTCCCGCACGCATTTGCACGCGGTTAAACGCTACACGTTATTCCCAGGCGAGCCACGGTGGCCGAGAAACCGCCGTGACTTGACCTACGCGTTCGACCCGAAAAACCCGTTGACGGAAGAGGTCAAGAGCGTGTTCTCACGCGCTTTTGGTCGTTGGTCTGACGTCACCGCGTTAAACTTCACTCTTTCCGAGTCTTTCTCGACGTCTGACATCACAATCGGATTCTACACCGGCGACCATGGTGACGGAGAGCCTTTCGACGGCGTTTTGGGAACATTAGCTCACGCTTTCTCTCCTCCCAGCGGGAAATTCCACCTAGACGCAGATGAGAACTGGGTGGTCTCCGGAGACCTAGACAGTTTCCTCTCCGTAACTGCTGCGGTTGATCTTGAATCAGTGGCGGTTCACGAGATCGGTCATCTTCTAGGTTTAGGACATTCTTCAGTTGAGGAATCCATCATGTATCCAACGATCACGACAGGGAAACGTAAGGTTGACTTAACCAATGATGACGTGGAAGGAATCCAATACTTGTACGGTGCAAACCCTAACTTCAACGGCACAACATCTCCACCGTCGACCACTAAACACCAGCGAGACACTGGTGGCTTCAGTGCCGCCTGGAGAATCGACGGTTCATCGAGATCAACAATTGTTAGTCTCTTGTTGTCAACCGTCGGATTGGTCTTGTGGTTCTTACCGTAG

Protein Analysis

378

Amino Acids

42.01

Weight (kDa)

5.78

Isoelectric Point (pI)

31.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PG_binding_1 PF01471 60 - 114 1.5e-10 Putative peptidoglycan binding domain
Peptidase_M10 PF00413 164 - 324 1.7e-51 Matrixin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011313)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 597, 638
Acc65I GGTACC 1 cut(s) 85
AccB1I GGYRCC 1 cut(s) 85
AccI GTMKAC 1 cut(s) 1010
AccII CGCG 6 cut(s) 83, 355, 452, 521, 573, 602
AccIII TCCGGA 1 cut(s) 776
AclI AACGTT 4 cut(s) 165, 202, 224, 306
AclWI GGATC 1 cut(s) 343
AcoI YGGCCR 2 cut(s) 157, 491
AcsI RAATTY 3 cut(s) 235, 292, 740
AcuI CTGAAG 2 cut(s) 858, 1027
AcvI CACGTG 1 cut(s) 113
AcyI GRCGYC 2 cut(s) 594, 635
AdeI CACNNNGTG 1 cut(s) 346
AfaI GTAC 3 cut(s) 87, 385, 968
AfiI CCNNNNNNNGG 5 cut(s) 60, 359, 544, 692, 734
AflIII ACRYGT 4 cut(s) 110, 112, 465, 519
AgeI ACCGGT 2 cut(s) 143, 311
AgsI TTSAA 4 cut(s) 298, 338, 824, 988
AjiI CACGTC 2 cut(s) 373, 946
AjnI CCWGG 3 cut(s) 59, 475, 1052
AluBI AGCT 2 cut(s) 319, 713
AluI AGCT 2 cut(s) 319, 713
Alw26I GTCTC 6 cut(s) 99, 179, 774, 778, 1023, 1097
AlwI GGATC 1 cut(s) 343
Aor13HI TCCGGA 1 cut(s) 776
AoxI GGCC 2 cut(s) 157, 491
ApeKI GCWGC 1 cut(s) 809
ApoI RAATTY 3 cut(s) 235, 292, 740
ArsI GACNNNNNNTTYG 2 cut(s) 258, 290
AsiGI ACCGGT 2 cut(s) 143, 311
Asp718I GGTACC 1 cut(s) 85
AspLEI GCGC 2 cut(s) 328, 575
AsuHPI GGTGA 6 cut(s) 133, 143, 232, 326, 589, 686
BaeI ACNNNNGTAYC 4 cut(s) 69, 77, 102, 110
BanI GGYRCC 1 cut(s) 85
BauI CACGAG 1 cut(s) 839
BbrPI CACGTG 1 cut(s) 113
BbvI GCAGC 1 cut(s) 796
BccI CCATC 2 cut(s) 164, 896
BceAI ACGGC 4 cut(s) 172, 489, 709, 1006
BciT130I CCWGG 3 cut(s) 61, 477, 1054
BciVI GTATCC 1 cut(s) 906
BcoDI GTCTC 6 cut(s) 99, 179, 774, 778, 1023, 1097
BfaI CTAG 3 cut(s) 749, 785, 857
BfuI GTATCC 1 cut(s) 906
BglI GCCNNNNNGGC 1 cut(s) 490
BisI GCNGC 3 cut(s) 270, 810, 1050
BlsI GCNGC 3 cut(s) 271, 811, 1051
Bme1390I CCNGG 3 cut(s) 61, 477, 1054
BmgBI CACGTC 2 cut(s) 373, 946
BmiI GGNNCC 1 cut(s) 87
BmrFI CCNGG 3 cut(s) 61, 477, 1054
BmrI ACTGGG 1 cut(s) 775
BmsI GCATC 2 cut(s) 313, 384
BmuI ACTGGG 1 cut(s) 775
BplI GAGNNNNNCTC 2 cut(s) 614, 646
BpmI CTGGAG 1 cut(s) 1075
BsaAI YACGTR 2 cut(s) 101, 113
BsaHI GRCGYC 2 cut(s) 594, 635
BsaI GGTCTC 3 cut(s) 179, 774, 778
BsaJI CCNNGG 5 cut(s) 81, 154, 475, 485, 670
BsaWI WCCGGW 3 cut(s) 143, 311, 776
BsaXI ACNNNNNCTCC 4 cut(s) 116, 146, 985, 1015
Bsc4I CCNNNNNNNGG 5 cut(s) 60, 359, 544, 692, 734
Bse118I RCCGGY 3 cut(s) 143, 311, 662
Bse1I ACTGG 2 cut(s) 770, 1039
BseAI TCCGGA 1 cut(s) 776
BseBI CCWGG 3 cut(s) 61, 477, 1054
BseDI CCNNGG 5 cut(s) 81, 154, 475, 485, 670
BseGI GGATG 1 cut(s) 213
BseLI CCNNNNNNNGG 5 cut(s) 60, 359, 544, 692, 734
BseNI ACTGG 2 cut(s) 770, 1039
BseRI GAGGAG 1 cut(s) 717
BseXI GCAGC 1 cut(s) 796
BseYI CCCAGC 1 cut(s) 731
Bsh1236I CGCG 6 cut(s) 83, 355, 452, 521, 573, 602
BshFI GGCC 2 cut(s) 159, 493
BshNI GGYRCC 1 cut(s) 85
BshTI ACCGGT 2 cut(s) 143, 311
BsiSI CCGG 4 cut(s) 144, 312, 663, 777
BslFI GGGAC 1 cut(s) 137
BslI CCNNNNNNNGG 5 cut(s) 60, 359, 544, 692, 734
BsmAI GTCTC 6 cut(s) 99, 179, 774, 778, 1023, 1097
BsmBI CGTCTC 1 cut(s) 99
BsmFI GGGAC 1 cut(s) 137
BsnI GGCC 2 cut(s) 159, 493
Bso31I GGTCTC 3 cut(s) 179, 774, 778
Bsp13I TCCGGA 1 cut(s) 776
Bsp143I GATC 5 cut(s) 348, 817, 843, 903, 1076
Bsp19I CCATGG 1 cut(s) 670
BspANI GGCC 2 cut(s) 159, 493
BspEI TCCGGA 1 cut(s) 776
BspFNI CGCG 6 cut(s) 83, 355, 452, 521, 573, 602
BspLI GGNNCC 1 cut(s) 87
BspPI GGATC 1 cut(s) 343
BspT107I GGYRCC 1 cut(s) 85
BspTNI GGTCTC 3 cut(s) 179, 774, 778
BsrFI RCCGGY 3 cut(s) 143, 311, 662
BsrI ACTGG 2 cut(s) 770, 1039
BssAI RCCGGY 3 cut(s) 143, 311, 662
BssECI CCNNGG 5 cut(s) 81, 154, 475, 485, 670
BssMI GATC 5 cut(s) 348, 817, 843, 903, 1076
BssNI GRCGYC 2 cut(s) 594, 635
BssSI CACGAG 1 cut(s) 839
BssT1I CCWWGG 1 cut(s) 670
Bst2BI CACGAG 1 cut(s) 839
Bst2UI CCWGG 3 cut(s) 61, 477, 1054
Bst6I CTCTTC 1 cut(s) 543
BstACI GRCGYC 2 cut(s) 594, 635
BstBAI YACGTR 2 cut(s) 101, 113
BstC8I GCNNGC 3 cut(s) 440, 450, 482
BstDSI CCRYGG 4 cut(s) 81, 154, 485, 670
BstF5I GGATG 1 cut(s) 213
BstFNI CGCG 6 cut(s) 83, 355, 452, 521, 573, 602
BstHHI GCGC 2 cut(s) 328, 575
BstKTI GATC 5 cut(s) 351, 820, 846, 906, 1079
BstMAI GTCTC 6 cut(s) 99, 179, 774, 778, 1023, 1097
BstMBI GATC 5 cut(s) 348, 817, 843, 903, 1076
BstMWI GCNNNNNNNGC 2 cut(s) 325, 490
BstNI CCWGG 3 cut(s) 61, 477, 1054
BstSCI CCNGG 3 cut(s) 59, 475, 1052
BstSNI TACGTA 1 cut(s) 101
BstUI CGCG 6 cut(s) 83, 355, 452, 521, 573, 602
BstV1I GCAGC 1 cut(s) 796
BstXI CCANNNNNNTGG 1 cut(s) 206
BsuI GTATCC 1 cut(s) 906
BsuRI GGCC 2 cut(s) 159, 493
BtgI CCRYGG 4 cut(s) 81, 154, 485, 670
BtrI CACGTC 2 cut(s) 373, 946
BtsCI GGATG 1 cut(s) 213
BtsIMutI CAGTG 3 cut(s) 834, 1032, 1051
Cac8I GCNNGC 3 cut(s) 440, 450, 482
CfoI GCGC 2 cut(s) 328, 575
Cfr10I RCCGGY 3 cut(s) 143, 311, 662
Cfr42I CCGCGG 1 cut(s) 84
CseI GACGC 2 cut(s) 134, 761
Csp6I GTAC 3 cut(s) 86, 384, 967
CspAI ACCGGT 2 cut(s) 143, 311
CviAII CATG 3 cut(s) 398, 671, 892
CviJI RGCY 8 cut(s) 159, 269, 319, 484, 493, 685, 713, 1041
CviKI_1 RGCY 8 cut(s) 159, 269, 319, 484, 493, 685, 713, 1041
CviQI GTAC 3 cut(s) 86, 384, 967
DpnI GATC 5 cut(s) 350, 819, 845, 905, 1078
DpnII GATC 5 cut(s) 348, 817, 843, 903, 1076
DraIII CACNNNGTG 1 cut(s) 346
EaeI YGGCCR 2 cut(s) 157, 491
Eam1104I CTCTTC 1 cut(s) 543
EarI CTCTTC 1 cut(s) 543
EciI GGCGGA 1 cut(s) 46
Eco105I TACGTA 1 cut(s) 101
Eco130I CCWWGG 1 cut(s) 670
Eco31I GGTCTC 3 cut(s) 179, 774, 778
Eco32I GATATC 1 cut(s) 259
Eco57I CTGAAG 2 cut(s) 858, 1027
Eco72I CACGTG 1 cut(s) 113
EcoRII CCWGG 3 cut(s) 59, 475, 1052
EcoRV GATATC 1 cut(s) 259
EcoT14I CCWWGG 1 cut(s) 670
EcoT22I ATGCAT 1 cut(s) 399
ErhI CCWWGG 1 cut(s) 670
Esp3I CGTCTC 1 cut(s) 99
FaeI CATG 3 cut(s) 401, 674, 895
FaiI YATR 3 cut(s) 399, 672, 893
FalI AAGNNNNNCTT 2 cut(s) 914, 946
FaqI GGGAC 1 cut(s) 137
FatI CATG 3 cut(s) 397, 670, 891
FauI CCCGC 4 cut(s) 360, 395, 443, 728
FblI GTMKAC 1 cut(s) 1010
Fnu4HI GCNGC 3 cut(s) 270, 810, 1050
FokI GGATG 1 cut(s) 200
Fsp4HI GCNGC 3 cut(s) 270, 810, 1050
FspBI CTAG 3 cut(s) 749, 785, 857
GlaI GCGC 2 cut(s) 327, 574
GluI GCNGC 3 cut(s) 270, 810, 1050
GsaI CCCAGC 1 cut(s) 735
GsuI CTGGAG 1 cut(s) 1075
HaeIII GGCC 2 cut(s) 159, 493
HapII CCGG 4 cut(s) 144, 312, 663, 777
HgaI GACGC 2 cut(s) 134, 761
HhaI GCGC 2 cut(s) 328, 575
Hin1I GRCGYC 2 cut(s) 594, 635
Hin1II CATG 3 cut(s) 401, 674, 895
Hin6I GCGC 2 cut(s) 326, 573
HinP1I GCGC 2 cut(s) 326, 573
HincII GTYRAC 6 cut(s) 379, 427, 543, 928, 1011, 1104
HindII GTYRAC 6 cut(s) 379, 427, 543, 928, 1011, 1104
HinfI GANTC 6 cut(s) 623, 654, 824, 884, 954, 1059
HpaII CCGG 4 cut(s) 144, 312, 663, 777
HphI GGTGA 6 cut(s) 133, 143, 232, 326, 589, 686
Hpy166II GTNNAC 7 cut(s) 379, 427, 543, 838, 928, 1011, 1104
Hpy188I TCNGA 6 cut(s) 288, 592, 622, 640, 653, 1112
Hpy8I GTNNAC 7 cut(s) 379, 427, 543, 838, 928, 1011, 1104
Hpy99I CGWCG 5 cut(s) 637, 695, 1012, 1067, 1112
HpyAV CCTTC 2 cut(s) 427, 944
HpyCH4V TGCA 3 cut(s) 397, 448, 974
HpyF10VI GCNNNNNNNGC 2 cut(s) 325, 490
Hsp92I GRCGYC 2 cut(s) 594, 635
Hsp92II CATG 3 cut(s) 401, 674, 895
HspAI GCGC 2 cut(s) 326, 573
Kpn2I TCCGGA 1 cut(s) 776
KpnI GGTACC 1 cut(s) 89
KspI CCGCGG 1 cut(s) 84
Kzo9I GATC 5 cut(s) 348, 817, 843, 903, 1076
Lsp1109I GCAGC 1 cut(s) 796
LweI GCATC 2 cut(s) 313, 384
MaeI CTAG 3 cut(s) 749, 785, 857
MaeIII GTNAC 8 cut(s) 101, 149, 209, 307, 506, 595, 674, 802
MalI GATC 5 cut(s) 350, 819, 845, 905, 1078
MboI GATC 5 cut(s) 348, 817, 843, 903, 1076
MboII GAAGA 5 cut(s) 58, 420, 560, 845, 864
MfeI CAATTG 1 cut(s) 1083
MluCI AATT 6 cut(s) 136, 235, 278, 292, 740, 1083
MluI ACGCGT 1 cut(s) 519
MlyI GAGTC 1 cut(s) 632
MmeI TCCRAC 3 cut(s) 223, 923, 1090
MnlI CCTC 7 cut(s) 64, 272, 415, 544, 738, 806, 874
Mph1103I ATGCAT 1 cut(s) 399
MroI TCCGGA 1 cut(s) 776
MseI TTAA 4 cut(s) 303, 456, 605, 932
MspA1I CMGCKG 3 cut(s) 83, 272, 735
MspI CCGG 4 cut(s) 144, 312, 663, 777
MspR9I CCNGG 3 cut(s) 61, 477, 1054
MunI CAATTG 1 cut(s) 1083
MvaI CCWGG 3 cut(s) 61, 477, 1054
MvnI CGCG 6 cut(s) 83, 355, 452, 521, 573, 602
MwoI GCNNNNNNNGC 2 cut(s) 325, 490
NcoI CCATGG 1 cut(s) 670
NdeII GATC 5 cut(s) 348, 817, 843, 903, 1076
NlaIII CATG 3 cut(s) 401, 674, 895
NlaIV GGNNCC 1 cut(s) 87
NmeAIII GCCGAG 1 cut(s) 519
NmuCI GTSAC 4 cut(s) 149, 506, 595, 674
NsiI ATGCAT 1 cut(s) 399
PcsI WCGNNNNNNNCGW 1 cut(s) 162
PfeI GAWTC 5 cut(s) 654, 824, 884, 954, 1059
PflFI GACNNNGTC 1 cut(s) 374
PinAI ACCGGT 2 cut(s) 143, 311
PkrI GCNGC 3 cut(s) 271, 811, 1051
PleI GAGTC 1 cut(s) 631
PmaCI CACGTG 1 cut(s) 113
PmlI CACGTG 1 cut(s) 113
PpsI GAGTC 1 cut(s) 631
Ppu21I YACGTR 2 cut(s) 101, 113
Psp1406I AACGTT 4 cut(s) 165, 202, 224, 306
Psp6I CCWGG 3 cut(s) 59, 475, 1052
PspCI CACGTG 1 cut(s) 113
PspFI CCCAGC 1 cut(s) 731
PspGI CCWGG 3 cut(s) 59, 475, 1052
PspN4I GGNNCC 1 cut(s) 87
PsyI GACNNNGTC 1 cut(s) 374
RsaI GTAC 3 cut(s) 87, 385, 968
RsaNI GTAC 3 cut(s) 86, 384, 967
SacII CCGCGG 1 cut(s) 84
SalI GTCGAC 1 cut(s) 1009
SaqAI TTAA 4 cut(s) 303, 456, 605, 932
SatI GCNGC 3 cut(s) 270, 810, 1050
Sau3AI GATC 5 cut(s) 348, 817, 843, 903, 1076
SchI GAGTC 1 cut(s) 632
ScrFI CCNGG 3 cut(s) 61, 477, 1054
SfaNI GCATC 2 cut(s) 313, 384
Sfr303I CCGCGG 1 cut(s) 84
SgrAI CRCCGGYG 1 cut(s) 662
SgrBI CCGCGG 1 cut(s) 84
SnaBI TACGTA 1 cut(s) 101
Sse9I AATT 6 cut(s) 136, 235, 278, 292, 740, 1083
SspMI CTAG 3 cut(s) 749, 785, 857
StyD4I CCNGG 3 cut(s) 59, 475, 1052
StyI CCWWGG 1 cut(s) 670
TaqI TCGA 8 cut(s) 276, 420, 525, 632, 690, 1010, 1062, 1073
TaqII GACCGA 1 cut(s) 836
TasI AATT 6 cut(s) 136, 235, 278, 292, 740, 1083
TauI GCSGC 2 cut(s) 272, 1052
TfiI GAWTC 5 cut(s) 654, 824, 884, 954, 1059
Tru1I TTAA 4 cut(s) 303, 456, 605, 932
Tru9I TTAA 4 cut(s) 303, 456, 605, 932
TscAI CASTG 3 cut(s) 834, 1039, 1051
TseFI GTSAC 4 cut(s) 149, 506, 595, 674
TseI GCWGC 1 cut(s) 809
Tsp45I GTSAC 4 cut(s) 149, 506, 595, 674
TspDTI ATGAA 1 cut(s) 1059
TspGWI ACGGA 3 cut(s) 560, 693, 790
TspRI CASTG 3 cut(s) 834, 1039, 1051
Tth111I GACNNNGTC 1 cut(s) 374
XapI RAATTY 3 cut(s) 235, 292, 740
XcmI CCANNNNNNNNNTGG 3 cut(s) 167, 943, 1031
XmiI GTMKAC 1 cut(s) 1010
XspI CTAG 3 cut(s) 749, 785, 857
ZraI GACGTC 2 cut(s) 595, 636
Zsp2I ATGCAT 1 cut(s) 399
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.