Belongs to the peptidase M10A family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G70170 |
| fragaria_vesca | FvH4_4g35180 FvH4_4g35180 |
| malus_domestica | MD13G1085700.v1.1 MD16G1085000.v1.1 |
| prunus_persica | Prupe.1G261000_v2.0.a1 |
| pyrus_communis | pycom13g07410 pycom16g07350 |
| rosa_chinensis | RchiOBHm_Chr4g0444791 |
| rosa_laevigata | RLG00000005802 |
| rosa_multiflora | Rmu_sc0000096.1_g000019 Rmu_sc0007130.1_g000003 Rmu_sc0037188.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00385280 |
| rosa_rugosa | Rorug04G0355300 |
| rosa_samantha | Rh4AG416500 Rh4BG427900 Rh4CG442700 Rh4DG423600 |
| rosa_wichuraiana | Rw4G035690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 913 |
| AccB1I | GGYRCC | 4 cut(s) | 404, 488, 581, 977 |
| AccBSI | CCGCTC | 1 cut(s) | 744 |
| AccI | GTMKAC | 1 cut(s) | 189 |
| AccII | CGCG | 5 cut(s) | 516, 728, 919, 1013, 1078 |
| AccIII | TCCGGA | 1 cut(s) | 422 |
| AclWI | GGATC | 3 cut(s) | 955, 968, 1120 |
| AcoI | YGGCCR | 1 cut(s) | 500 |
| AcsI | RAATTY | 1 cut(s) | 241 |
| AcyI | GRCGYC | 4 cut(s) | 147, 434, 582, 978 |
| AfaI | GTAC | 3 cut(s) | 902, 922, 1000 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 380, 498, 591, 701, 743 |
| AflIII | ACRYGT | 2 cut(s) | 726, 1035 |
| AgeI | ACCGGT | 1 cut(s) | 785 |
| AgsI | TTSAA | 4 cut(s) | 154, 220, 287, 319 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 829 |
| AjiI | CACGTC | 1 cut(s) | 1038 |
| AjnI | CCWGG | 2 cut(s) | 133, 756 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 536, 568 |
| AluBI | AGCT | 5 cut(s) | 74, 205, 340, 550, 937 |
| AluI | AGCT | 5 cut(s) | 74, 205, 340, 550, 937 |
| Alw21I | GWGCWC | 3 cut(s) | 342, 552, 846 |
| Alw26I | GTCTC | 3 cut(s) | 273, 469, 669 |
| Alw44I | GTGCAC | 1 cut(s) | 842 |
| AlwI | GGATC | 3 cut(s) | 955, 968, 1120 |
| Aor13HI | TCCGGA | 1 cut(s) | 422 |
| AoxI | GGCC | 4 cut(s) | 193, 347, 500, 1086 |
| ApaI | GGGCCC | 2 cut(s) | 351, 1090 |
| ApaLI | GTGCAC | 1 cut(s) | 842 |
| ApeKI | GCWGC | 1 cut(s) | 1043 |
| ApoI | RAATTY | 1 cut(s) | 241 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 351, 383 |
| AsiGI | ACCGGT | 1 cut(s) | 785 |
| AspLEI | GCGC | 4 cut(s) | 140, 584, 980, 1015 |
| AspS9I | GGNCC | 6 cut(s) | 347, 348, 823, 1051, 1086, 1087 |
| AsuC2I | CCSGG | 1 cut(s) | 486 |
| AsuHPI | GGTGA | 5 cut(s) | 253, 322, 775, 790, 800 |
| AvaII | GGWCC | 2 cut(s) | 823, 1051 |
| BaeGI | GKGCMC | 4 cut(s) | 351, 846, 876, 1090 |
| BamHI | GGATCC | 1 cut(s) | 960 |
| BanI | GGYRCC | 4 cut(s) | 404, 488, 581, 977 |
| BanII | GRGCYC | 4 cut(s) | 342, 351, 552, 1090 |
| BauI | CACGAG | 1 cut(s) | 845 |
| Bbv12I | GWGCWC | 3 cut(s) | 342, 552, 846 |
| BbvCI | CCTCAGC | 2 cut(s) | 70, 197 |
| BbvI | GCAGC | 1 cut(s) | 1030 |
| BceAI | ACGGC | 8 cut(s) | 208, 418, 697, 703, 778, 803, 991, 1000 |
| BciT130I | CCWGG | 2 cut(s) | 135, 758 |
| BclI | TGATCA | 1 cut(s) | 780 |
| BcnI | CCSGG | 1 cut(s) | 486 |
| BcoDI | GTCTC | 3 cut(s) | 273, 469, 669 |
| BfoI | RGCGCY | 3 cut(s) | 141, 585, 981 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 177 |
| BisI | GCNGC | 6 cut(s) | 291, 382, 503, 514, 603, 1044 |
| BlsI | GCNGC | 6 cut(s) | 292, 383, 504, 515, 604, 1045 |
| Bme1390I | CCNGG | 3 cut(s) | 135, 486, 758 |
| Bme18I | GGWCC | 2 cut(s) | 823, 1051 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 829 |
| BmgBI | CACGTC | 1 cut(s) | 1038 |
| BmgT120I | GGNCC | 6 cut(s) | 347, 348, 823, 1051, 1086, 1087 |
| BmiI | GGNNCC | 9 cut(s) | 349, 406, 490, 583, 752, 962, 979, 1052, 1088 |
| BmrFI | CCNGG | 3 cut(s) | 135, 486, 758 |
| BmrI | ACTGGG | 1 cut(s) | 784 |
| BmsI | GCATC | 3 cut(s) | 368, 865, 880 |
| BmuI | ACTGGG | 1 cut(s) | 784 |
| Bpu10I | CCTNAGC | 2 cut(s) | 70, 197 |
| BpuEI | CTTGAG | 1 cut(s) | 848 |
| BpuMI | CCSGG | 1 cut(s) | 486 |
| BsaHI | GRCGYC | 4 cut(s) | 147, 434, 582, 978 |
| BsaI | GGTCTC | 2 cut(s) | 273, 669 |
| BsaJI | CCNNGG | 7 cut(s) | 484, 679, 807, 819, 834, 1057, 1076 |
| BsaWI | WCCGGW | 2 cut(s) | 422, 785 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 80, 110, 536, 566, 716, 746, 1057, 1087 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 380, 498, 591, 701, 743 |
| Bse118I | RCCGGY | 4 cut(s) | 176, 332, 430, 785 |
| Bse1I | ACTGG | 2 cut(s) | 779, 942 |
| Bse3DI | GCAATG | 1 cut(s) | 36 |
| BseAI | TCCGGA | 1 cut(s) | 422 |
| BseBI | CCWGG | 2 cut(s) | 135, 758 |
| BseDI | CCNNGG | 7 cut(s) | 484, 679, 807, 819, 834, 1057, 1076 |
| BseGI | GGATG | 2 cut(s) | 895, 1007 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 380, 498, 591, 701, 743 |
| BseMI | GCAATG | 1 cut(s) | 36 |
| BseMII | CTCAG | 3 cut(s) | 84, 211, 1037 |
| BseNI | ACTGG | 2 cut(s) | 779, 942 |
| BseRI | GAGGAG | 1 cut(s) | 85 |
| BseSI | GKGCMC | 4 cut(s) | 351, 846, 876, 1090 |
| BseXI | GCAGC | 1 cut(s) | 1030 |
| BseYI | CCCAGC | 2 cut(s) | 862, 1046 |
| Bsh1236I | CGCG | 5 cut(s) | 516, 728, 919, 1013, 1078 |
| BshFI | GGCC | 4 cut(s) | 195, 349, 502, 1088 |
| BshNI | GGYRCC | 4 cut(s) | 404, 488, 581, 977 |
| BshTI | ACCGGT | 1 cut(s) | 785 |
| BsiHKAI | GWGCWC | 3 cut(s) | 342, 552, 846 |
| BsiSI | CCGG | 7 cut(s) | 177, 333, 423, 431, 486, 539, 786 |
| BsiWI | CGTACG | 1 cut(s) | 920 |
| BslFI | GGGAC | 5 cut(s) | 101, 158, 727, 1046, 1064 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 380, 498, 591, 701, 743 |
| BsmAI | GTCTC | 3 cut(s) | 273, 469, 669 |
| BsmBI | CGTCTC | 1 cut(s) | 469 |
| BsmFI | GGGAC | 5 cut(s) | 101, 158, 727, 1046, 1064 |
| BsnI | GGCC | 4 cut(s) | 195, 349, 502, 1088 |
| Bso31I | GGTCTC | 2 cut(s) | 273, 669 |
| Bsp120I | GGGCCC | 2 cut(s) | 347, 1086 |
| Bsp1286I | GDGCHC | 6 cut(s) | 342, 351, 552, 846, 876, 1090 |
| Bsp13I | TCCGGA | 1 cut(s) | 422 |
| Bsp143I | GATC | 5 cut(s) | 657, 780, 909, 960, 1112 |
| BspANI | GGCC | 4 cut(s) | 195, 349, 502, 1088 |
| BspCNI | CTCAG | 3 cut(s) | 83, 210, 1036 |
| BspEI | TCCGGA | 1 cut(s) | 422 |
| BspFNI | CGCG | 5 cut(s) | 516, 728, 919, 1013, 1078 |
| BspLI | GGNNCC | 9 cut(s) | 349, 406, 490, 583, 752, 962, 979, 1052, 1088 |
| BspPI | GGATC | 3 cut(s) | 955, 968, 1120 |
| BspT107I | GGYRCC | 4 cut(s) | 404, 488, 581, 977 |
| BspTNI | GGTCTC | 2 cut(s) | 273, 669 |
| BsrBI | CCGCTC | 1 cut(s) | 744 |
| BsrDI | GCAATG | 1 cut(s) | 36 |
| BsrFI | RCCGGY | 4 cut(s) | 176, 332, 430, 785 |
| BsrI | ACTGG | 2 cut(s) | 779, 942 |
| BssAI | RCCGGY | 4 cut(s) | 176, 332, 430, 785 |
| BssECI | CCNNGG | 7 cut(s) | 484, 679, 807, 819, 834, 1057, 1076 |
| BssMI | GATC | 5 cut(s) | 657, 780, 909, 960, 1112 |
| BssNI | GRCGYC | 4 cut(s) | 147, 434, 582, 978 |
| BssSI | CACGAG | 1 cut(s) | 845 |
| Bst2BI | CACGAG | 1 cut(s) | 845 |
| Bst2UI | CCWGG | 2 cut(s) | 135, 758 |
| Bst4CI | ACNGT | 4 cut(s) | 105, 224, 571, 998 |
| BstACI | GRCGYC | 4 cut(s) | 147, 434, 582, 978 |
| BstC8I | GCNNGC | 6 cut(s) | 76, 178, 203, 338, 692, 939 |
| BstDEI | CTNAG | 3 cut(s) | 70, 197, 1023 |
| BstDSI | CCRYGG | 5 cut(s) | 679, 807, 819, 834, 1076 |
| BstF5I | GGATG | 2 cut(s) | 895, 1007 |
| BstFNI | CGCG | 5 cut(s) | 516, 728, 919, 1013, 1078 |
| BstH2I | RGCGCY | 3 cut(s) | 141, 585, 981 |
| BstHHI | GCGC | 4 cut(s) | 140, 584, 980, 1015 |
| BstKTI | GATC | 5 cut(s) | 660, 783, 912, 963, 1115 |
| BstMAI | GTCTC | 3 cut(s) | 273, 469, 669 |
| BstMBI | GATC | 5 cut(s) | 657, 780, 909, 960, 1112 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 146, 177, 346 |
| BstNI | CCWGG | 2 cut(s) | 135, 758 |
| BstSCI | CCNGG | 3 cut(s) | 133, 484, 756 |
| BstSLI | GKGCMC | 4 cut(s) | 351, 846, 876, 1090 |
| BstUI | CGCG | 5 cut(s) | 516, 728, 919, 1013, 1078 |
| BstV1I | GCAGC | 1 cut(s) | 1030 |
| BstX2I | RGATCY | 2 cut(s) | 960, 1112 |
| BstYI | RGATCY | 2 cut(s) | 960, 1112 |
| BsuRI | GGCC | 4 cut(s) | 195, 349, 502, 1088 |
| BtgI | CCRYGG | 5 cut(s) | 679, 807, 819, 834, 1076 |
| BtgZI | GCGATG | 2 cut(s) | 39, 780 |
| BtrI | CACGTC | 1 cut(s) | 1038 |
| BtsCI | GGATG | 2 cut(s) | 895, 1007 |
| BtsIMutI | CAGTG | 1 cut(s) | 949 |
| Cac8I | GCNNGC | 6 cut(s) | 76, 178, 203, 338, 692, 939 |
| CfoI | GCGC | 4 cut(s) | 140, 584, 980, 1015 |
| Cfr10I | RCCGGY | 4 cut(s) | 176, 332, 430, 785 |
| Cfr13I | GGNCC | 6 cut(s) | 347, 348, 823, 1051, 1086, 1087 |
| Cfr42I | CCGCGG | 1 cut(s) | 1079 |
| CseI | GACGC | 4 cut(s) | 155, 423, 451, 976 |
| Csp6I | GTAC | 3 cut(s) | 901, 921, 999 |
| CspAI | ACCGGT | 1 cut(s) | 785 |
| CviQI | GTAC | 3 cut(s) | 901, 921, 999 |
| DdeI | CTNAG | 3 cut(s) | 70, 197, 1023 |
| DinI | GGCGCC | 2 cut(s) | 583, 979 |
| DpnI | GATC | 5 cut(s) | 659, 782, 911, 962, 1114 |
| DpnII | GATC | 5 cut(s) | 657, 780, 909, 960, 1112 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 913 |
| DriI | GACNNNNNGTC | 1 cut(s) | 829 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 913 |
| EaeI | YGGCCR | 1 cut(s) | 500 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 829 |
| EciI | GGCGGA | 1 cut(s) | 662 |
| Ecl136II | GAGCTC | 2 cut(s) | 340, 550 |
| Eco24I | GRGCYC | 4 cut(s) | 342, 351, 552, 1090 |
| Eco31I | GGTCTC | 2 cut(s) | 273, 669 |
| Eco47I | GGWCC | 2 cut(s) | 823, 1051 |
| Eco53kI | GAGCTC | 2 cut(s) | 340, 550 |
| EcoICRI | GAGCTC | 2 cut(s) | 340, 550 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1087 |
| EcoRII | CCWGG | 2 cut(s) | 133, 756 |
| EcoT38I | GRGCYC | 4 cut(s) | 342, 351, 552, 1090 |
| EgeI | GGCGCC | 2 cut(s) | 583, 979 |
| EheI | GGCGCC | 2 cut(s) | 583, 979 |
| Esp3I | CGTCTC | 1 cut(s) | 469 |
| FaiI | YATR | 7 cut(s) | 101, 395, 416, 441, 528, 899, 973 |
| FaqI | GGGAC | 5 cut(s) | 101, 158, 727, 1046, 1064 |
| FauI | CCCGC | 1 cut(s) | 744 |
| FbaI | TGATCA | 1 cut(s) | 780 |
| FblI | GTMKAC | 1 cut(s) | 189 |
| Fnu4HI | GCNGC | 6 cut(s) | 291, 382, 503, 514, 603, 1044 |
| FokI | GGATG | 2 cut(s) | 902, 994 |
| FriOI | GRGCYC | 4 cut(s) | 342, 351, 552, 1090 |
| Fsp4HI | GCNGC | 6 cut(s) | 291, 382, 503, 514, 603, 1044 |
| GlaI | GCGC | 4 cut(s) | 139, 583, 979, 1014 |
| GluI | GCNGC | 6 cut(s) | 291, 382, 503, 514, 603, 1044 |
| GsaI | CCCAGC | 2 cut(s) | 866, 1050 |
| HaeII | RGCGCY | 3 cut(s) | 141, 585, 981 |
| HaeIII | GGCC | 4 cut(s) | 195, 349, 502, 1088 |
| HapII | CCGG | 7 cut(s) | 177, 333, 423, 431, 486, 539, 786 |
| HgaI | GACGC | 4 cut(s) | 155, 423, 451, 976 |
| HhaI | GCGC | 4 cut(s) | 140, 584, 980, 1015 |
| Hin1I | GRCGYC | 4 cut(s) | 147, 434, 582, 978 |
| Hin6I | GCGC | 4 cut(s) | 138, 582, 978, 1013 |
| HinP1I | GCGC | 4 cut(s) | 138, 582, 978, 1013 |
| HincII | GTYRAC | 2 cut(s) | 190, 400 |
| HindII | GTYRAC | 2 cut(s) | 190, 400 |
| HinfI | GANTC | 4 cut(s) | 663, 715, 812, 830 |
| HpaII | CCGG | 7 cut(s) | 177, 333, 423, 431, 486, 539, 786 |
| HphI | GGTGA | 5 cut(s) | 253, 322, 775, 790, 800 |
| Hpy166II | GTNNAC | 5 cut(s) | 190, 400, 823, 844, 1020 |
| Hpy188I | TCNGA | 3 cut(s) | 556, 662, 674 |
| Hpy188III | TCNNGA | 3 cut(s) | 423, 655, 964 |
| Hpy8I | GTNNAC | 5 cut(s) | 190, 400, 823, 844, 1020 |
| HpyAV | CCTTC | 4 cut(s) | 160, 595, 646, 922 |
| HpyCH4III | ACNGT | 4 cut(s) | 105, 224, 571, 998 |
| HpyCH4IV | ACGT | 2 cut(s) | 951, 1037 |
| HpyCH4V | TGCA | 2 cut(s) | 722, 844 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 146, 177, 346 |
| HpyF3I | CTNAG | 3 cut(s) | 70, 197, 1023 |
| HpySE526I | ACGT | 2 cut(s) | 951, 1037 |
| Hsp92I | GRCGYC | 4 cut(s) | 147, 434, 582, 978 |
| HspAI | GCGC | 4 cut(s) | 138, 582, 978, 1013 |
| KasI | GGCGCC | 2 cut(s) | 581, 977 |
| Kpn2I | TCCGGA | 1 cut(s) | 422 |
| KroI | GCCGGC | 1 cut(s) | 176 |
| KroNI | GCCGGC | 1 cut(s) | 178 |
| Ksp22I | TGATCA | 1 cut(s) | 780 |
| KspI | CCGCGG | 1 cut(s) | 1079 |
| Kzo9I | GATC | 5 cut(s) | 657, 780, 909, 960, 1112 |
| LmnI | GCTCC | 1 cut(s) | 934 |
| Lsp1109I | GCAGC | 1 cut(s) | 1030 |
| LweI | GCATC | 3 cut(s) | 368, 865, 880 |
| MaeII | ACGT | 2 cut(s) | 951, 1037 |
| MaeIII | GTNAC | 5 cut(s) | 230, 328, 788, 944, 1119 |
| MalI | GATC | 5 cut(s) | 659, 782, 911, 962, 1114 |
| MbiI | CCGCTC | 1 cut(s) | 744 |
| MboI | GATC | 5 cut(s) | 657, 780, 909, 960, 1112 |
| MboII | GAAGA | 5 cut(s) | 16, 73, 472, 658, 937 |
| MflI | RGATCY | 2 cut(s) | 960, 1112 |
| MhlI | GDGCHC | 6 cut(s) | 342, 351, 552, 846, 876, 1090 |
| MluCI | AATT | 2 cut(s) | 241, 988 |
| MluI | ACGCGT | 1 cut(s) | 726 |
| Mly113I | GGCGCC | 2 cut(s) | 582, 978 |
| MlyI | GAGTC | 3 cut(s) | 709, 821, 839 |
| MmeI | TCCRAC | 3 cut(s) | 579, 652, 1090 |
| MreI | CGCCGGCG | 1 cut(s) | 176 |
| MroI | TCCGGA | 1 cut(s) | 422 |
| MroNI | GCCGGC | 1 cut(s) | 176 |
| MseI | TTAA | 1 cut(s) | 614 |
| MslI | CAYNNNNRTG | 1 cut(s) | 413 |
| MspA1I | CMGCKG | 2 cut(s) | 592, 1078 |
| MspI | CCGG | 7 cut(s) | 177, 333, 423, 431, 486, 539, 786 |
| MspR9I | CCNGG | 3 cut(s) | 135, 486, 758 |
| MvaI | CCWGG | 2 cut(s) | 135, 758 |
| MvnI | CGCG | 5 cut(s) | 516, 728, 919, 1013, 1078 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 146, 177, 346 |
| NaeI | GCCGGC | 1 cut(s) | 178 |
| NarI | GGCGCC | 2 cut(s) | 582, 978 |
| NciI | CCSGG | 1 cut(s) | 486 |
| NdeII | GATC | 5 cut(s) | 657, 780, 909, 960, 1112 |
| NgoMIV | GCCGGC | 1 cut(s) | 176 |
| NlaIV | GGNNCC | 9 cut(s) | 349, 406, 490, 583, 752, 962, 979, 1052, 1088 |
| NmeAIII | GCCGAG | 2 cut(s) | 623, 765 |
| NmuCI | GTSAC | 3 cut(s) | 328, 788, 944 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 363, 552, 666, 687, 920 |
| PdiI | GCCGGC | 1 cut(s) | 178 |
| PfeI | GAWTC | 1 cut(s) | 663 |
| Pfl23II | CGTACG | 1 cut(s) | 920 |
| PflFI | GACNNNGTC | 1 cut(s) | 395 |
| PinAI | ACCGGT | 1 cut(s) | 785 |
| PkrI | GCNGC | 6 cut(s) | 292, 383, 504, 515, 604, 1045 |
| PleI | GAGTC | 3 cut(s) | 709, 820, 838 |
| PluTI | GGCGCC | 2 cut(s) | 585, 981 |
| PpsI | GAGTC | 3 cut(s) | 709, 820, 838 |
| Psp124BI | GAGCTC | 2 cut(s) | 342, 552 |
| Psp6I | CCWGG | 2 cut(s) | 133, 756 |
| PspFI | CCCAGC | 2 cut(s) | 862, 1046 |
| PspGI | CCWGG | 2 cut(s) | 133, 756 |
| PspLI | CGTACG | 1 cut(s) | 920 |
| PspN4I | GGNNCC | 9 cut(s) | 349, 406, 490, 583, 752, 962, 979, 1052, 1088 |
| PspOMI | GGGCCC | 2 cut(s) | 347, 1086 |
| PspPI | GGNCC | 6 cut(s) | 347, 348, 823, 1051, 1086, 1087 |
| PsuI | RGATCY | 2 cut(s) | 960, 1112 |
| PsyI | GACNNNGTC | 1 cut(s) | 395 |
| RsaI | GTAC | 3 cut(s) | 902, 922, 1000 |
| RsaNI | GTAC | 3 cut(s) | 901, 921, 999 |
| RseI | CAYNNNNRTG | 1 cut(s) | 413 |
| SacI | GAGCTC | 2 cut(s) | 342, 552 |
| SacII | CCGCGG | 1 cut(s) | 1079 |
| SalI | GTCGAC | 1 cut(s) | 188 |
| SaqAI | TTAA | 1 cut(s) | 614 |
| SatI | GCNGC | 6 cut(s) | 291, 382, 503, 514, 603, 1044 |
| Sau3AI | GATC | 5 cut(s) | 657, 780, 909, 960, 1112 |
| Sau96I | GGNCC | 6 cut(s) | 347, 348, 823, 1051, 1086, 1087 |
| SchI | GAGTC | 3 cut(s) | 709, 821, 839 |
| ScrFI | CCNGG | 3 cut(s) | 135, 486, 758 |
| SduI | GDGCHC | 6 cut(s) | 342, 351, 552, 846, 876, 1090 |
| SfaNI | GCATC | 3 cut(s) | 368, 865, 880 |
| SfoI | GGCGCC | 2 cut(s) | 583, 979 |
| Sfr303I | CCGCGG | 1 cut(s) | 1079 |
| SgrAI | CRCCGGYG | 3 cut(s) | 176, 332, 785 |
| SgrBI | CCGCGG | 1 cut(s) | 1079 |
| SinI | GGWCC | 2 cut(s) | 823, 1051 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 413 |
| SmlI | CTYRAG | 1 cut(s) | 827 |
| SmoI | CTYRAG | 1 cut(s) | 827 |
| Sse9I | AATT | 2 cut(s) | 241, 988 |
| SspDI | GGCGCC | 2 cut(s) | 581, 977 |
| SstI | GAGCTC | 2 cut(s) | 342, 552 |
| StyD4I | CCNGG | 3 cut(s) | 133, 484, 756 |
| TaaI | ACNGT | 4 cut(s) | 105, 224, 571, 998 |
| TaiI | ACGT | 2 cut(s) | 954, 1040 |
| TaqI | TCGA | 5 cut(s) | 189, 273, 342, 357, 699 |
| TasI | AATT | 2 cut(s) | 241, 988 |
| TauI | GCSGC | 5 cut(s) | 293, 384, 505, 516, 605 |
| TfiI | GAWTC | 1 cut(s) | 663 |
| Tru1I | TTAA | 1 cut(s) | 614 |
| Tru9I | TTAA | 1 cut(s) | 614 |
| TscAI | CASTG | 1 cut(s) | 949 |
| TseFI | GTSAC | 3 cut(s) | 328, 788, 944 |
| TseI | GCWGC | 1 cut(s) | 1043 |
| Tsp45I | GTSAC | 3 cut(s) | 328, 788, 944 |
| TspDTI | ATGAA | 2 cut(s) | 17, 431 |
| TspGWI | ACGGA | 4 cut(s) | 291, 796, 823, 1082 |
| TspRI | CASTG | 1 cut(s) | 949 |
| Tth111I | GACNNNGTC | 1 cut(s) | 395 |
| VneI | GTGCAC | 1 cut(s) | 842 |
| VpaK11BI | GGWCC | 2 cut(s) | 823, 1051 |
| XapI | RAATTY | 1 cut(s) | 241 |
| XmiI | GTMKAC | 1 cut(s) | 189 |