Rmu_sc0007130.1_g000003

Belongs to the peptidase M10A family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007130.1
Physical Location & Seq
Forward (+)
12328 .. 13321
994 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007130.1_g000003.1.cds

Sequence Viewer

Length: 994 bp
atgaagttttcctttcacctcttctccatcgccatttgcctcacactttcacacacctccgctcgcttcttccccaacataaccaacataccaccgtggctcctcccgaacgtcaccgtcccagcctcttctagcgcctgggacgccttccagaagtttgggaactgccgccccggcgagaagatcgacggcttggccaagctcaagaagtatttcaactacttcggctacattcccaacctccctaccaacttcacagacgacttcgacggtgagctcgagtcggctctcaagacctaccagaagaacttcaacctcaacgtcacaggcgaactagacgaacagactatcaaccacctcgtgcgtccccgctgcggcaaccctgacgtagtcaacggcacgaccaccatgaactccggcaagccgatgtcatttaacagctccaagctccacacggtcggtcactactctttctttcccggaactccggtctggcccgtgggccgccgtgatctgaccttcgcgttcttgccggacaacgagctttcagacgaggccaaggccgtcttcgttagcgccttccagaagtggtcgactgtcattccgatgaccttcaccgagacgacgtcgttctactcggcagacatcaagatcggcttctacgtcggagaccacggcgacggtgaggccttcgatggcgttctggggactctggcgcacgcgttctctcccccgagcgggatgttccacctggacggcgacgagaactgggtcatcggaggtgacatcaccacgtccacggtgacgtcagccatcgacctggagtcggtggcggttcacgagataggtcacttgttagggttggggcactcttcggttgaggagtcgatcatgtacccaaccatcacgtcgaagacgaagaaagttgacctcgcaaacgacgacgttcaggggattcagaaactgtatggcgccaaccctagttacgacggtt

Protein Analysis

331

Amino Acids

36.36

Weight (kDa)

5.2

Isoelectric Point (pI)

26.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011313)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 629, 809
AccB1I GGYRCC 1 cut(s) 971
AccBSI CCGCTC 2 cut(s) 62, 738
AccI GTMKAC 1 cut(s) 593
AccII CGCG 2 cut(s) 524, 722
AciI CCGC 7 cut(s) 60, 169, 370, 375, 505, 738, 833
AcoI YGGCCR 1 cut(s) 195
AcyI GRCGYC 4 cut(s) 144, 626, 806, 972
AdeI CACNNNGTG 1 cut(s) 361
AfaI GTAC 1 cut(s) 896
AfiI CCNNNNNNNGG 4 cut(s) 374, 737, 738, 826
AflIII ACRYGT 1 cut(s) 720
AgsI TTSAA 2 cut(s) 217, 313
AhdI GACNNNNNGTC 1 cut(s) 823
AjiI CACGTC 2 cut(s) 795, 909
AjnI CCWGG 3 cut(s) 137, 750, 819
AjuI GAANNNNNNNTTGG 2 cut(s) 551, 583
AluBI AGCT 5 cut(s) 202, 277, 441, 448, 544
AluI AGCT 5 cut(s) 202, 277, 441, 448, 544
Alw21I GWGCWC 1 cut(s) 279
Alw26I GTCTC 2 cut(s) 614, 663
AlwNI CAGNNNCTG 1 cut(s) 964
Ama87I CYCGRG 2 cut(s) 278, 733
AoxI GGCC 6 cut(s) 195, 494, 502, 555, 561, 687
ApeKI GCWGC 1 cut(s) 372
Asp700I GAANNNNTTC 2 cut(s) 212, 308
AspLEI GCGC 4 cut(s) 137, 578, 718, 974
AspS9I GGNCC 2 cut(s) 495, 502
AsuC2I CCSGG 2 cut(s) 174, 480
AsuHPI GGTGA 8 cut(s) 8, 106, 284, 607, 695, 781, 794, 814
AvaI CYCGRG 2 cut(s) 278, 733
BaeGI GKGCMC 1 cut(s) 870
BalI TGGCCA 1 cut(s) 197
BanI GGYRCC 1 cut(s) 971
BanII GRGCYC 1 cut(s) 279
BauI CACGAG 2 cut(s) 359, 839
BbsI GAAGAC 2 cut(s) 559, 920
Bbv12I GWGCWC 1 cut(s) 279
BbvI GCAGC 1 cut(s) 359
BccI CCATC 4 cut(s) 35, 689, 821, 911
BceAI ACGGC 6 cut(s) 205, 412, 492, 548, 691, 772
BciT130I CCWGG 3 cut(s) 139, 752, 821
BcnI CCSGG 2 cut(s) 174, 480
BcoDI GTCTC 2 cut(s) 614, 663
BfaI CTAG 3 cut(s) 132, 335, 981
BfoI RGCGCY 3 cut(s) 138, 579, 975
BglI GCCNNNNNGGC 1 cut(s) 174
BisI GCNGC 4 cut(s) 169, 373, 376, 505
BlsI GCNGC 4 cut(s) 170, 374, 377, 506
Bme1390I CCNGG 5 cut(s) 139, 174, 480, 752, 821
BmeRI GACNNNNNGTC 1 cut(s) 823
BmeT110I CYCGRG 2 cut(s) 278, 733
BmgBI CACGTC 2 cut(s) 795, 909
BmgT120I GGNCC 2 cut(s) 495, 502
BmiI GGNNCC 2 cut(s) 101, 973
BmrFI CCNGG 5 cut(s) 139, 174, 480, 752, 821
BmrI ACTGGG 1 cut(s) 778
BmuI ACTGGG 1 cut(s) 778
BpiI GAAGAC 2 cut(s) 559, 920
BpmI CTGGAG 1 cut(s) 842
BpuEI CTTGAG 2 cut(s) 188, 275
BpuMI CCSGG 2 cut(s) 174, 480
BsaHI GRCGYC 4 cut(s) 144, 626, 806, 972
BsaI GGTCTC 1 cut(s) 663
BsaJI CCNNGG 7 cut(s) 95, 138, 172, 498, 558, 673, 798
BsaWI WCCGGW 1 cut(s) 487
BsaXI ACNNNNNCTCC 4 cut(s) 8, 38, 84, 114
Bsc4I CCNNNNNNNGG 4 cut(s) 374, 737, 738, 826
Bse1I ACTGG 1 cut(s) 773
BseBI CCWGG 3 cut(s) 139, 752, 821
BseDI CCNNGG 7 cut(s) 95, 138, 172, 498, 558, 673, 798
BseGI GGATG 1 cut(s) 747
BseLI CCNNNNNNNGG 4 cut(s) 374, 737, 738, 826
BseNI ACTGG 1 cut(s) 773
BseRI GAGGAG 2 cut(s) 92, 896
BseSI GKGCMC 1 cut(s) 870
BseXI GCAGC 1 cut(s) 359
BseYI CCCAGC 1 cut(s) 121
Bsh1236I CGCG 2 cut(s) 524, 722
Bsh1285I CGRYCG 1 cut(s) 459
BshFI GGCC 6 cut(s) 197, 496, 504, 557, 563, 689
BshNI GGYRCC 1 cut(s) 971
BsiEI CGRYCG 1 cut(s) 459
BsiHKAI GWGCWC 1 cut(s) 279
BsiHKCI CYCGRG 2 cut(s) 278, 733
BsiSI CCGG 5 cut(s) 174, 417, 480, 488, 533
BslFI GGGAC 4 cut(s) 104, 155, 351, 721
BslI CCNNNNNNNGG 4 cut(s) 374, 737, 738, 826
BsmAI GTCTC 2 cut(s) 614, 663
BsmBI CGTCTC 1 cut(s) 614
BsmFI GGGAC 4 cut(s) 104, 155, 351, 721
BsnI GGCC 6 cut(s) 197, 496, 504, 557, 563, 689
Bso31I GGTCTC 1 cut(s) 663
BsoBI CYCGRG 2 cut(s) 278, 733
Bsp1286I GDGCHC 2 cut(s) 279, 870
Bsp143I GATC 4 cut(s) 183, 511, 651, 888
BspACI CCGC 7 cut(s) 60, 169, 370, 375, 505, 738, 833
BspANI GGCC 6 cut(s) 197, 496, 504, 557, 563, 689
BspFNI CGCG 2 cut(s) 524, 722
BspLI GGNNCC 2 cut(s) 101, 973
BspT107I GGYRCC 1 cut(s) 971
BspTNI GGTCTC 1 cut(s) 663
BsrBI CCGCTC 2 cut(s) 62, 738
BsrI ACTGG 1 cut(s) 773
BssECI CCNNGG 7 cut(s) 95, 138, 172, 498, 558, 673, 798
BssMI GATC 4 cut(s) 183, 511, 651, 888
BssNI GRCGYC 4 cut(s) 144, 626, 806, 972
BssSI CACGAG 2 cut(s) 359, 839
BssT1I CCWWGG 1 cut(s) 558
Bst2BI CACGAG 2 cut(s) 359, 839
Bst2UI CCWGG 3 cut(s) 139, 752, 821
Bst4CI ACNGT 9 cut(s) 96, 118, 272, 457, 598, 683, 802, 966, 992
Bst6I CTCTTC 3 cut(s) 26, 133, 877
BstACI GRCGYC 4 cut(s) 144, 626, 806, 972
BstC8I GCNNGC 3 cut(s) 64, 422, 720
BstDSI CCRYGG 4 cut(s) 95, 498, 673, 798
BstF5I GGATG 1 cut(s) 747
BstFNI CGCG 2 cut(s) 524, 722
BstH2I RGCGCY 3 cut(s) 138, 579, 975
BstHHI GCGC 4 cut(s) 137, 578, 718, 974
BstKTI GATC 4 cut(s) 186, 514, 654, 891
BstMAI GTCTC 2 cut(s) 614, 663
BstMBI GATC 4 cut(s) 183, 511, 651, 888
BstMCI CGRYCG 1 cut(s) 459
BstMWI GCNNNNNNNGC 2 cut(s) 143, 174
BstNI CCWGG 3 cut(s) 139, 752, 821
BstSCI CCNGG 5 cut(s) 137, 172, 478, 750, 819
BstSLI GKGCMC 1 cut(s) 870
BstUI CGCG 2 cut(s) 524, 722
BstV1I GCAGC 1 cut(s) 359
BstV2I GAAGAC 2 cut(s) 559, 920
BstXI CCANNNNNNTGG 2 cut(s) 158, 820
BsuRI GGCC 6 cut(s) 197, 496, 504, 557, 563, 689
BtgI CCRYGG 4 cut(s) 95, 498, 673, 798
BtgZI GCGATG 1 cut(s) 13
BtrI CACGTC 2 cut(s) 795, 909
BtsCI GGATG 1 cut(s) 747
Cac8I GCNNGC 3 cut(s) 64, 422, 720
CaiI CAGNNNCTG 1 cut(s) 964
CfoI GCGC 4 cut(s) 137, 578, 718, 974
Cfr13I GGNCC 2 cut(s) 495, 502
CseI GACGC 2 cut(s) 152, 353
Csp6I GTAC 1 cut(s) 895
CviAII CATG 2 cut(s) 409, 892
CviQI GTAC 1 cut(s) 895
DinI GGCGCC 1 cut(s) 973
DpnI GATC 4 cut(s) 185, 513, 653, 890
DpnII GATC 4 cut(s) 183, 511, 651, 888
DraIII CACNNNGTG 1 cut(s) 361
DriI GACNNNNNGTC 1 cut(s) 823
EaeI YGGCCR 1 cut(s) 195
Eam1104I CTCTTC 3 cut(s) 26, 133, 877
Eam1105I GACNNNNNGTC 1 cut(s) 823
EarI CTCTTC 3 cut(s) 26, 133, 877
Ecl136II GAGCTC 1 cut(s) 277
Eco130I CCWWGG 1 cut(s) 558
Eco147I AGGCCT 1 cut(s) 689
Eco24I GRGCYC 1 cut(s) 279
Eco31I GGTCTC 1 cut(s) 663
Eco53kI GAGCTC 1 cut(s) 277
Eco88I CYCGRG 2 cut(s) 278, 733
EcoICRI GAGCTC 1 cut(s) 277
EcoRII CCWGG 3 cut(s) 137, 750, 819
EcoT14I CCWWGG 1 cut(s) 558
EcoT38I GRGCYC 1 cut(s) 279
EgeI GGCGCC 1 cut(s) 973
EheI GGCGCC 1 cut(s) 973
ErhI CCWWGG 1 cut(s) 558
Esp3I CGTCTC 1 cut(s) 614
FaeI CATG 2 cut(s) 412, 895
FaiI YATR 5 cut(s) 80, 89, 410, 893, 969
FalI AAGNNNNNCTT 5 cut(s) 28, 551, 583, 641, 673
FaqI GGGAC 4 cut(s) 104, 155, 351, 721
FatI CATG 2 cut(s) 408, 891
FauI CCCGC 2 cut(s) 377, 731
FblI GTMKAC 1 cut(s) 593
Fnu4HI GCNGC 4 cut(s) 169, 373, 376, 505
FokI GGATG 1 cut(s) 754
FriOI GRGCYC 1 cut(s) 279
Fsp4HI GCNGC 4 cut(s) 169, 373, 376, 505
FspBI CTAG 3 cut(s) 132, 335, 981
GlaI GCGC 4 cut(s) 136, 577, 717, 973
GluI GCNGC 4 cut(s) 169, 373, 376, 505
GsaI CCCAGC 1 cut(s) 125
GsuI CTGGAG 1 cut(s) 842
HaeII RGCGCY 3 cut(s) 138, 579, 975
HaeIII GGCC 6 cut(s) 197, 496, 504, 557, 563, 689
HapII CCGG 5 cut(s) 174, 417, 480, 488, 533
HgaI GACGC 2 cut(s) 152, 353
HhaI GCGC 4 cut(s) 137, 578, 718, 974
Hin1I GRCGYC 4 cut(s) 144, 626, 806, 972
Hin1II CATG 2 cut(s) 412, 895
Hin6I GCGC 4 cut(s) 135, 576, 716, 972
HinP1I GCGC 4 cut(s) 135, 576, 716, 972
HincII GTYRAC 3 cut(s) 394, 594, 928
HindII GTYRAC 3 cut(s) 394, 594, 928
HinfI GANTC 5 cut(s) 281, 709, 824, 884, 955
HpaII CCGG 5 cut(s) 174, 417, 480, 488, 533
HphI GGTGA 8 cut(s) 8, 106, 284, 607, 695, 781, 794, 814
Hpy166II GTNNAC 5 cut(s) 394, 594, 798, 838, 928
Hpy188I TCNGA 6 cut(s) 516, 550, 606, 668, 779, 960
Hpy188III TCNNGA 7 cut(s) 106, 151, 205, 292, 583, 649, 839
Hpy8I GTNNAC 5 cut(s) 394, 594, 798, 838, 928
HpyAV CCTTC 5 cut(s) 157, 529, 589, 622, 700
HpyCH4III ACNGT 9 cut(s) 96, 118, 272, 457, 598, 683, 802, 966, 992
HpyCH4IV ACGT 9 cut(s) 111, 321, 387, 626, 663, 794, 806, 908, 945
HpyF10VI GCNNNNNNNGC 2 cut(s) 143, 174
HpySE526I ACGT 9 cut(s) 111, 321, 387, 626, 663, 794, 806, 908, 945
Hsp92I GRCGYC 4 cut(s) 144, 626, 806, 972
Hsp92II CATG 2 cut(s) 412, 895
HspAI GCGC 4 cut(s) 135, 576, 716, 972
KasI GGCGCC 1 cut(s) 971
Kzo9I GATC 4 cut(s) 183, 511, 651, 888
LmnI GCTCC 3 cut(s) 105, 446, 453
Lsp1109I GCAGC 1 cut(s) 359
MaeI CTAG 3 cut(s) 132, 335, 981
MaeII ACGT 9 cut(s) 111, 321, 387, 626, 663, 794, 806, 908, 945
MaeIII GTNAC 7 cut(s) 112, 322, 461, 782, 802, 848, 983
MalI GATC 4 cut(s) 185, 513, 653, 890
MbiI CCGCTC 2 cut(s) 62, 738
MboI GATC 4 cut(s) 183, 511, 651, 888
MboII GAAGA 9 cut(s) 13, 61, 120, 193, 316, 559, 864, 925, 931
MhlI GDGCHC 2 cut(s) 279, 870
MlsI TGGCCA 1 cut(s) 197
MluI ACGCGT 1 cut(s) 720
MluNI TGGCCA 1 cut(s) 197
Mly113I GGCGCC 1 cut(s) 972
MlyI GAGTC 4 cut(s) 290, 703, 833, 893
MmeI TCCRAC 1 cut(s) 646
Mox20I TGGCCA 1 cut(s) 197
MroXI GAANNNNTTC 2 cut(s) 212, 308
MscI TGGCCA 1 cut(s) 197
MseI TTAA 1 cut(s) 435
MslI CAYNNNNRTG 1 cut(s) 605
Msp20I TGGCCA 1 cut(s) 197
MspA1I CMGCKG 1 cut(s) 372
MspI CCGG 5 cut(s) 174, 417, 480, 488, 533
MspR9I CCNGG 5 cut(s) 139, 174, 480, 752, 821
MvaI CCWGG 3 cut(s) 139, 752, 821
MvnI CGCG 2 cut(s) 524, 722
MwoI GCNNNNNNNGC 2 cut(s) 143, 174
NarI GGCGCC 1 cut(s) 972
NciI CCSGG 2 cut(s) 174, 480
NdeII GATC 4 cut(s) 183, 511, 651, 888
NlaIII CATG 2 cut(s) 412, 895
NlaIV GGNNCC 2 cut(s) 101, 973
NmeAIII GCCGAG 1 cut(s) 617
NmuCI GTSAC 6 cut(s) 112, 322, 461, 782, 802, 848
PaeR7I CTCGAG 1 cut(s) 278
PceI AGGCCT 1 cut(s) 689
PcsI WCGNNNNNNNCGW 5 cut(s) 276, 327, 660, 914, 939
PdmI GAANNNNTTC 2 cut(s) 212, 308
PfeI GAWTC 1 cut(s) 955
PflFI GACNNNGTC 2 cut(s) 389, 625
PfoI TCCNGGA 1 cut(s) 478
PkrI GCNGC 4 cut(s) 170, 374, 377, 506
PleI GAGTC 4 cut(s) 289, 703, 832, 892
PluTI GGCGCC 1 cut(s) 975
PpsI GAGTC 4 cut(s) 289, 703, 832, 892
Psp124BI GAGCTC 1 cut(s) 279
Psp6I CCWGG 3 cut(s) 137, 750, 819
PspFI CCCAGC 1 cut(s) 121
PspGI CCWGG 3 cut(s) 137, 750, 819
PspN4I GGNNCC 2 cut(s) 101, 973
PspPI GGNCC 2 cut(s) 495, 502
PspXI VCTCGAGB 1 cut(s) 278
PstNI CAGNNNCTG 1 cut(s) 964
PsyI GACNNNGTC 2 cut(s) 389, 625
RsaI GTAC 1 cut(s) 896
RsaNI GTAC 1 cut(s) 895
RseI CAYNNNNRTG 1 cut(s) 605
SacI GAGCTC 1 cut(s) 279
SalI GTCGAC 1 cut(s) 592
SaqAI TTAA 1 cut(s) 435
SatI GCNGC 4 cut(s) 169, 373, 376, 505
Sau3AI GATC 4 cut(s) 183, 511, 651, 888
Sau96I GGNCC 2 cut(s) 495, 502
SchI GAGTC 4 cut(s) 290, 703, 833, 893
ScrFI CCNGG 5 cut(s) 139, 174, 480, 752, 821
SduI GDGCHC 2 cut(s) 279, 870
SfoI GGCGCC 1 cut(s) 973
Sfr274I CTCGAG 1 cut(s) 278
SlaI CTCGAG 1 cut(s) 278
SmiMI CAYNNNNRTG 1 cut(s) 605
SmlI CTYRAG 3 cut(s) 203, 278, 290
SmoI CTYRAG 3 cut(s) 203, 278, 290
SseBI AGGCCT 1 cut(s) 689
SsiI CCGC 7 cut(s) 60, 169, 370, 375, 505, 738, 833
SspDI GGCGCC 1 cut(s) 971
SspMI CTAG 3 cut(s) 132, 335, 981
SstI GAGCTC 1 cut(s) 279
StuI AGGCCT 1 cut(s) 689
StyD4I CCNGG 5 cut(s) 137, 172, 478, 750, 819
StyI CCWWGG 1 cut(s) 558
TaaI ACNGT 9 cut(s) 96, 118, 272, 457, 598, 683, 802, 966, 992
TaiI ACGT 9 cut(s) 114, 324, 390, 629, 666, 797, 809, 911, 948
TaqI TCGA 8 cut(s) 186, 267, 279, 593, 693, 816, 887, 911
TaqII GACCGA 1 cut(s) 449
TauI GCSGC 3 cut(s) 171, 378, 507
TfiI GAWTC 1 cut(s) 955
Tru1I TTAA 1 cut(s) 435
Tru9I TTAA 1 cut(s) 435
TseFI GTSAC 6 cut(s) 112, 322, 461, 782, 802, 848
TseI GCWGC 1 cut(s) 372
Tsp45I GTSAC 6 cut(s) 112, 322, 461, 782, 802, 848
TspDTI ATGAA 2 cut(s) 17, 425
Tth111I GACNNNGTC 2 cut(s) 389, 625
XhoI CTCGAG 1 cut(s) 278
XmiI GTMKAC 1 cut(s) 593
XmnI GAANNNNTTC 2 cut(s) 212, 308
XspI CTAG 3 cut(s) 132, 335, 981
ZraI GACGTC 2 cut(s) 627, 807
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.