Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011115

Physical Location & Seq

Genomic Coordinates Forward (+)

26699321 .. 26702544

Gene Structure 3224 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G70790.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 558 bp

ATGGAAGATAAACCATTAGGGATTCTCAGGGTTCATGTCAAAAGAGGGATTAATCTTGCTATTCGTGATGCCACCACCAGTGATCCTTATGTTGTTATCACATTGGCTAATCAGAAACTGAAGACGCGTGTGATTAATAATAACTGTAATCCAGTGTGGAACGAACAACTGACCCTTTCCATCAAAGATGTGAATGATCCTATCCGTCTGACGGTGTTTGATAAAGATAGATTCTCGGGAGATGACAAAATGGGTGATGCAGAAATAGACTTTAGGCCGTTCCTAGAAGCGCATCAAATGGAGTTAGATTTCCAGAAGCTCCCCAATGGTTGTGCAATCAAGAGGATCCGTCCAGGCAGGACCAACTGTTTAGCTGAAGAGAGCAGCATCACTTGGAGCAATGGGAAGATCATGCAAGAGATGATTCTTAGACTAAAGAATGTGGAGTGTGGGGAAGTAGAGCTCATGCTTGAGTGGACTGATGGTCCAGGCTGCAAGGGTCTGGGACGCGAAGGATCCAAGAAGACACCATGGATGCCGACAAAACGATTGGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005543 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0006810 GO:0006886 GO:0007275 GO:0008047 GO:0008104 GO:0008150 GO:0008289 GO:0009314 GO:0009416 GO:0009555 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009637 GO:0009638 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0010646 GO:0010647 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0023051 GO:0023056 GO:0030234 GO:0030695 GO:0032501 GO:0032502 GO:0033036 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0048046 GO:0048229 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0071944 GO:0098772 GO:1901419 GO:1901421 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

185

Amino Acids

21.05

Weight (kDa)

7.61

Isoelectric Point (pI)

26.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	7 - 99	1.8e-26	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011115)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70790 AT1G70790 AT1G70790 AT1G70790
fragaria_vesca	FvH4_4g32810 FvH4_4g32811
malus_domestica	MD13G1022400.v1.1 MD16G1023600.v1.1
prunus_persica	Prupe.1G329300_v2.0.a1
pyrus_communis	pycom13g02090
rosa_chinensis	RchiOBHm_Chr4g0441811
rosa_laevigata	RLG00000006064
rosa_multiflora	Rmu_sc0008316.1_g000001
rosa_roxburghii	Rroxscaffold_5G00382630
rosa_rugosa	Rorug04G0336500
rosa_samantha	Rh4AG387900 Rh4BG401600 Rh4CG416600 Rh4DG394900
rosa_wichuraiana	Rw4G033480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	127, 510
AclWI	GGATC	6 cut(s)	77, 191, 340, 353, 510, 523
AcuI	CTGAAG	2 cut(s)	140, 396
AfiI	CCNNNNNNNGG	1 cut(s)	211
AflIII	ACRYGT	1 cut(s)	125
AhdI	GACNNNNNGTC	1 cut(s)	483
AjnI	CCWGG	2 cut(s)	352, 487
AluBI	AGCT	3 cut(s)	319, 374, 463
AluI	AGCT	3 cut(s)	319, 374, 463
Alw21I	GWGCWC	1 cut(s)	465
AlwI	GGATC	6 cut(s)	77, 191, 340, 353, 510, 523
AlwNI	CAGNNNCTG	1 cut(s)	118
Ama87I	CYCGRG	1 cut(s)	235
AoxI	GGCC	1 cut(s)	275
ApeKI	GCWGC	2 cut(s)	384, 492
AseI	ATTAAT	2 cut(s)	51, 135
AspLEI	GCGC	1 cut(s)	292
AspS9I	GGNCC	2 cut(s)	360, 485
AsuHPI	GGTGA	1 cut(s)	266
AvaI	CYCGRG	1 cut(s)	235
AvaII	GGWCC	2 cut(s)	360, 485
BamHI	GGATCC	2 cut(s)	345, 515
BanII	GRGCYC	1 cut(s)	465
BbsI	GAAGAC	2 cut(s)	128, 530
Bbv12I	GWGCWC	1 cut(s)	465
BbvI	GCAGC	2 cut(s)	396, 479
BccI	CCATC	2 cut(s)	188, 476
BceAI	ACGGC	1 cut(s)	262
BciT130I	CCWGG	2 cut(s)	354, 489
BfaI	CTAG	1 cut(s)	284
BisI	GCNGC	2 cut(s)	385, 493
BlsI	GCNGC	2 cut(s)	386, 494
Bme1390I	CCNGG	2 cut(s)	354, 489
Bme18I	GGWCC	2 cut(s)	360, 485
BmeRI	GACNNNNNGTC	1 cut(s)	483
BmeT110I	CYCGRG	1 cut(s)	235
BmgT120I	GGNCC	2 cut(s)	360, 485
BmiI	GGNNCC	2 cut(s)	347, 517
BmrFI	CCNGG	2 cut(s)	354, 489
BmsI	GCATC	5 cut(s)	58, 247, 301, 396, 525
BpiI	GAAGAC	2 cut(s)	128, 530
BpuEI	CTTGAG	1 cut(s)	491
BsaJI	CCNNGG	1 cut(s)	530
Bsc4I	CCNNNNNNNGG	1 cut(s)	211
Bse1I	ACTGG	2 cut(s)	78, 152
Bse3DI	GCAATG	1 cut(s)	406
BseBI	CCWGG	2 cut(s)	354, 489
BseDI	CCNNGG	1 cut(s)	530
BseGI	GGATG	1 cut(s)	540
BseLI	CCNNNNNNNGG	1 cut(s)	211
BseMI	GCAATG	1 cut(s)	406
BseMII	CTCAG	1 cut(s)	40
BseNI	ACTGG	2 cut(s)	78, 152
BseXI	GCAGC	2 cut(s)	396, 479
Bsh1236I	CGCG	2 cut(s)	127, 510
BshFI	GGCC	1 cut(s)	277
BsiHKAI	GWGCWC	1 cut(s)	465
BsiHKCI	CYCGRG	1 cut(s)	235
BslFI	GGGAC	1 cut(s)	519
BslI	CCNNNNNNNGG	1 cut(s)	211
BsmFI	GGGAC	1 cut(s)	519
BsnI	GGCC	1 cut(s)	277
BsoBI	CYCGRG	1 cut(s)	235
Bsp1286I	GDGCHC	1 cut(s)	465
Bsp143I	GATC	5 cut(s)	82, 196, 345, 408, 515
Bsp19I	CCATGG	1 cut(s)	530
BspANI	GGCC	1 cut(s)	277
BspCNI	CTCAG	1 cut(s)	39
BspFNI	CGCG	2 cut(s)	127, 510
BspLI	GGNNCC	2 cut(s)	347, 517
BspPI	GGATC	6 cut(s)	77, 191, 340, 353, 510, 523
BsrDI	GCAATG	1 cut(s)	406
BsrI	ACTGG	2 cut(s)	78, 152
BssECI	CCNNGG	1 cut(s)	530
BssMI	GATC	5 cut(s)	82, 196, 345, 408, 515
BssT1I	CCWWGG	1 cut(s)	530
Bst2UI	CCWGG	2 cut(s)	354, 489
Bst4CI	ACNGT	3 cut(s)	146, 214, 368
Bst6I	CTCTTC	1 cut(s)	372
BstDEI	CTNAG	2 cut(s)	26, 428
BstDSI	CCRYGG	1 cut(s)	530
BstF5I	GGATG	1 cut(s)	540
BstFNI	CGCG	2 cut(s)	127, 510
BstHHI	GCGC	1 cut(s)	292
BstKTI	GATC	5 cut(s)	85, 199, 348, 411, 518
BstMBI	GATC	5 cut(s)	82, 196, 345, 408, 515
BstNI	CCWGG	2 cut(s)	354, 489
BstSCI	CCNGG	2 cut(s)	352, 487
BstUI	CGCG	2 cut(s)	127, 510
BstV1I	GCAGC	2 cut(s)	396, 479
BstV2I	GAAGAC	2 cut(s)	128, 530
BstX2I	RGATCY	2 cut(s)	345, 515
BstYI	RGATCY	2 cut(s)	345, 515
BsuRI	GGCC	1 cut(s)	277
BtgI	CCRYGG	1 cut(s)	530
BtsCI	GGATG	1 cut(s)	540
BtsIMutI	CAGTG	2 cut(s)	85, 159
CaiI	CAGNNNCTG	1 cut(s)	118
CfoI	GCGC	1 cut(s)	292
Cfr13I	GGNCC	2 cut(s)	360, 485
CseI	GACGC	2 cut(s)	133, 516
CviAII	CATG	4 cut(s)	35, 412, 466, 531
CviJI	RGCY	6 cut(s)	107, 277, 319, 374, 463, 492
CviKI_1	RGCY	6 cut(s)	107, 277, 319, 374, 463, 492
DdeI	CTNAG	2 cut(s)	26, 428
DpnI	GATC	5 cut(s)	84, 198, 347, 410, 517
DpnII	GATC	5 cut(s)	82, 196, 345, 408, 515
DriI	GACNNNNNGTC	1 cut(s)	483
Eam1104I	CTCTTC	1 cut(s)	372
Eam1105I	GACNNNNNGTC	1 cut(s)	483
EarI	CTCTTC	1 cut(s)	372
Ecl136II	GAGCTC	1 cut(s)	463
Eco130I	CCWWGG	1 cut(s)	530
Eco24I	GRGCYC	1 cut(s)	465
Eco47I	GGWCC	2 cut(s)	360, 485
Eco53kI	GAGCTC	1 cut(s)	463
Eco57I	CTGAAG	2 cut(s)	140, 396
Eco88I	CYCGRG	1 cut(s)	235
EcoICRI	GAGCTC	1 cut(s)	463
EcoRII	CCWGG	2 cut(s)	352, 487
EcoT14I	CCWWGG	1 cut(s)	530
EcoT38I	GRGCYC	1 cut(s)	465
ErhI	CCWWGG	1 cut(s)	530
FaeI	CATG	4 cut(s)	38, 415, 469, 534
FaiI	YATR	5 cut(s)	36, 90, 413, 467, 532
FaqI	GGGAC	1 cut(s)	519
FatI	CATG	4 cut(s)	34, 411, 465, 530
Fnu4HI	GCNGC	2 cut(s)	385, 493
FokI	GGATG	1 cut(s)	547
FriOI	GRGCYC	1 cut(s)	465
Fsp4HI	GCNGC	2 cut(s)	385, 493
FspBI	CTAG	1 cut(s)	284
GlaI	GCGC	1 cut(s)	291
GluI	GCNGC	2 cut(s)	385, 493
HaeIII	GGCC	1 cut(s)	277
HgaI	GACGC	2 cut(s)	133, 516
HhaI	GCGC	1 cut(s)	292
Hin1II	CATG	4 cut(s)	38, 415, 469, 534
Hin6I	GCGC	1 cut(s)	290
HinP1I	GCGC	1 cut(s)	290
HinfI	GANTC	3 cut(s)	22, 231, 424
HphI	GGTGA	1 cut(s)	266
Hpy166II	GTNNAC	1 cut(s)	477
Hpy188I	TCNGA	2 cut(s)	114, 210
Hpy188III	TCNNGA	4 cut(s)	65, 237, 313, 340
Hpy8I	GTNNAC	1 cut(s)	477
HpyAV	CCTTC	1 cut(s)	506
HpyCH4III	ACNGT	3 cut(s)	146, 214, 368
HpyCH4V	TGCA	4 cut(s)	260, 335, 415, 495
HpyF3I	CTNAG	2 cut(s)	26, 428
Hsp92II	CATG	4 cut(s)	38, 415, 469, 534
HspAI	GCGC	1 cut(s)	290
Kzo9I	GATC	5 cut(s)	82, 196, 345, 408, 515
LmnI	GCTCC	2 cut(s)	324, 396
Lsp1109I	GCAGC	2 cut(s)	396, 479
LweI	GCATC	5 cut(s)	58, 247, 301, 396, 525
MaeI	CTAG	1 cut(s)	284
MalI	GATC	5 cut(s)	84, 198, 347, 410, 517
MboI	GATC	5 cut(s)	82, 196, 345, 408, 515
MboII	GAAGA	5 cut(s)	17, 133, 389, 418, 535
MflI	RGATCY	2 cut(s)	345, 515
MhlI	GDGCHC	1 cut(s)	465
MluI	ACGCGT	1 cut(s)	125
MnlI	CCTC	2 cut(s)	38, 336
MseI	TTAA	2 cut(s)	51, 135
MspR9I	CCNGG	2 cut(s)	354, 489
MvaI	CCWGG	2 cut(s)	354, 489
MvnI	CGCG	2 cut(s)	127, 510
NcoI	CCATGG	1 cut(s)	530
NdeII	GATC	5 cut(s)	82, 196, 345, 408, 515
NlaIII	CATG	4 cut(s)	38, 415, 469, 534
NlaIV	GGNNCC	2 cut(s)	347, 517
PfeI	GAWTC	3 cut(s)	22, 231, 424
PkrI	GCNGC	2 cut(s)	386, 494
PshBI	ATTAAT	2 cut(s)	51, 135
Psp124BI	GAGCTC	1 cut(s)	465
Psp6I	CCWGG	2 cut(s)	352, 487
PspGI	CCWGG	2 cut(s)	352, 487
PspN4I	GGNNCC	2 cut(s)	347, 517
PspPI	GGNCC	2 cut(s)	360, 485
PstNI	CAGNNNCTG	1 cut(s)	118
PsuI	RGATCY	2 cut(s)	345, 515
SacI	GAGCTC	1 cut(s)	465
SaqAI	TTAA	2 cut(s)	51, 135
SatI	GCNGC	2 cut(s)	385, 493
Sau3AI	GATC	5 cut(s)	82, 196, 345, 408, 515
Sau96I	GGNCC	2 cut(s)	360, 485
ScrFI	CCNGG	2 cut(s)	354, 489
SduI	GDGCHC	1 cut(s)	465
SetI	ASST	3 cut(s)	321, 376, 465
SfaNI	GCATC	5 cut(s)	58, 247, 301, 396, 525
SinI	GGWCC	2 cut(s)	360, 485
SmlI	CTYRAG	1 cut(s)	470
SmoI	CTYRAG	1 cut(s)	470
SspMI	CTAG	1 cut(s)	284
SstI	GAGCTC	1 cut(s)	465
StyD4I	CCNGG	2 cut(s)	352, 487
StyI	CCWWGG	1 cut(s)	530
TaaI	ACNGT	3 cut(s)	146, 214, 368
TfiI	GAWTC	3 cut(s)	22, 231, 424
Tru1I	TTAA	2 cut(s)	51, 135
Tru9I	TTAA	2 cut(s)	51, 135
TscAI	CASTG	2 cut(s)	85, 159
TseI	GCWGC	2 cut(s)	384, 492
TspDTI	ATGAA	1 cut(s)	23
TspGWI	ACGGA	2 cut(s)	194, 338
TspRI	CASTG	2 cut(s)	85, 159
VpaK11BI	GGWCC	2 cut(s)	360, 485
VspI	ATTAAT	2 cut(s)	51, 135
XspI	CTAG	1 cut(s)	284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.