AT1G71695

Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0015039
Physical Location & Seq
Forward (+)
26964087 .. 26966688
2602 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G71695.1

Sequence Viewer

Length: 1077 bp
ATGACAAAGGCTTATTCAACACGTGTCCTCACGTTTCTGATATTGATCTCGCTAATGGCGGTGACACTGAACCTTTTTCCCACGGTAGAGGCAAAGAAGCGGAGTAGAGATGCTCCTATAGTGAAAGGTCTCTCATGGAACTTTTACCAGAAAGCATGTCCGAAAGTCGAAAACATCATCAGAAAAGAGCTCAAGAAAGTCTTCAAGCGAGATATTGGTTTAGCCGCTGCCATCCTTCGTATACATTTCCATGATTGCTTCGTTCAGGGATGTGAAGCATCAGTGCTGCTAGCTGGATCAGCCAGTGGACCAGGAGAACAATCATCAATCCCAAATCTGACACTACGACAACAAGCCTTTGTCGTCATTAATAACCTTCGTGCCCTCGTCCAAAAGAAGTGCGGTCAAGTCGTCTCTTGCTCAGATATCCTCGCTCTCGCCGCTCGCGATTCCGTCGTCCTATCAGGAGGGCCAGACTATGCTGTCCCACTTGGCCGACGTGACTCTCTAGCGTTCGCGAGCCAGGAAACGACGTTAAATAACTTACCACCACCGTTCTTCAACGCGAGTCAGCTCATCGCCGACTTCGCCAACAGAAACCTCAACATCACCGACTTAGTAGCACTTTCCGGTGGTCACACCATCGGAATCGCGCATTGTCCGTCTTTCACAGACCGACTCTACCCGAACCAAGACCCAACCATGAACCAGTTCTTCGCCAACAGCCTCAAACGCACTTGTCCCACCGCAAACTCGAGCAACACGCAAGTGAATGACATAAGGAGTCCTGACGTGTTCGACAACAAGTACTACGTTGATCTCATGAACCGACAAGGGCTATTCACTTCTGACCAGGATCTCTTCGTGGATAAGAGGACACGTGGCATTGTGGAAAGCTTTGCGATCGACCAGCAGCTGTTTTTTGATTATTTTACTGTGGCGATGATCAAGATGGGTCAGATGAGTGTCTTAACTGGAACACAAGGAGAGATTCGTTCCAATTGTTCAGCCAGAAACACCCAAAGTTTCATGTCCGTTTTGGAAGAAGGCATAGAGGAAGCTATTTCCATGATCTAA

Protein Analysis

358

Amino Acids

39.56

Weight (kDa)

8.58

Isoelectric Point (pI)

48.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
peroxidase PF00141 60 - 301 7.8e-81 Peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G71695
fragaria_vesca FvH4_2g13110
malus_domestica MD00G1190800.v1.1 MD10G1033300.v1.1
prunus_persica Prupe.8G038900_v2.0.a1
pyrus_communis pycom10g02150
rosa_chinensis RchiOBHm_Chr6g0274401
rosa_laevigata RLG00000013546
rosa_multiflora Rmu_sc0001289.1_g000007
rosa_roxburghii Rroxscaffold_7G00194260
rosa_rugosa Rorug06G0081300
rosa_samantha Rh6AG197400 Rh6BG201100 Rh6CG202000 Rh6DG192600
rosa_wichuraiana Rw6G017200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 482
AccBSI CCGCTC 1 cut(s) 443
AccI GTMKAC 1 cut(s) 241
AccII CGCG 4 cut(s) 447, 518, 566, 653
AciI CCGC 6 cut(s) 59, 100, 225, 402, 441, 747
AclWI GGATC 2 cut(s) 304, 864
AcoI YGGCCR 1 cut(s) 493
AcvI CACGTG 2 cut(s) 23, 881
AfaI GTAC 1 cut(s) 809
AflIII ACRYGT 4 cut(s) 20, 22, 792, 878
AgsI TTSAA 3 cut(s) 18, 205, 562
AjiI CACGTC 2 cut(s) 500, 793
AjnI CCWGG 3 cut(s) 310, 522, 852
AleI CACNNNNGTG 1 cut(s) 767
AluBI AGCT 6 cut(s) 190, 293, 574, 897, 916, 1061
AluI AGCT 6 cut(s) 190, 293, 574, 897, 916, 1061
Alw21I GWGCWC 1 cut(s) 192
Alw26I GTCTC 2 cut(s) 134, 418
AlwI GGATC 2 cut(s) 304, 864
AlwNI CAGNNNCTG 1 cut(s) 916
Ama87I CYCGRG 1 cut(s) 754
AoxI GGCC 2 cut(s) 470, 493
ApeKI GCWGC 3 cut(s) 227, 286, 913
AseI ATTAAT 1 cut(s) 369
Asp700I GAANNNNTTC 2 cut(s) 200, 710
AspLEI GCGC 1 cut(s) 655
AspS9I GGNCC 2 cut(s) 308, 470
AsuHPI GGTGA 2 cut(s) 73, 601
AsuNHI GCTAGC 1 cut(s) 289
AvaI CYCGRG 1 cut(s) 754
AvaII GGWCC 1 cut(s) 308
BaeGI GKGCMC 1 cut(s) 385
BanII GRGCYC 1 cut(s) 192
BbrPI CACGTG 2 cut(s) 23, 881
BbsI GAAGAC 1 cut(s) 193
Bbv12I GWGCWC 1 cut(s) 192
BbvI GCAGC 3 cut(s) 214, 273, 925
BccI CCATC 3 cut(s) 239, 650, 946
BciT130I CCWGG 3 cut(s) 312, 524, 854
BclI TGATCA 1 cut(s) 945
BcoDI GTCTC 2 cut(s) 134, 418
BfaI CTAG 2 cut(s) 290, 509
BfmI CTRYAG 1 cut(s) 117
BisI GCNGC 5 cut(s) 225, 228, 287, 441, 914
BlsI GCNGC 5 cut(s) 226, 229, 288, 442, 915
BmcAI AGTACT 1 cut(s) 809
Bme1390I CCNGG 3 cut(s) 312, 524, 854
Bme18I GGWCC 1 cut(s) 308
BmeT110I CYCGRG 1 cut(s) 754
BmgBI CACGTC 2 cut(s) 500, 793
BmgT120I GGNCC 2 cut(s) 308, 470
BmrFI CCNGG 3 cut(s) 312, 524, 854
BmsI GCATC 2 cut(s) 100, 287
BmtI GCTAGC 1 cut(s) 293
BpiI GAAGAC 1 cut(s) 193
BpuEI CTTGAG 1 cut(s) 176
BsaAI YACGTR 2 cut(s) 23, 881
BsaBI GATNNNNATC 1 cut(s) 44
BsaI GGTCTC 1 cut(s) 134
BsaJI CCNNGG 1 cut(s) 81
BsaWI WCCGGW 1 cut(s) 629
Bse1I ACTGG 3 cut(s) 303, 709, 979
Bse8I GATNNNNATC 1 cut(s) 44
BseBI CCWGG 3 cut(s) 312, 524, 854
BseDI CCNNGG 1 cut(s) 81
BseGI GGATG 2 cut(s) 231, 275
BseJI GATNNNNATC 1 cut(s) 44
BseMII CTCAG 1 cut(s) 435
BseNI ACTGG 3 cut(s) 303, 709, 979
BseSI GKGCMC 1 cut(s) 385
BseXI GCAGC 3 cut(s) 214, 273, 925
Bsh1236I CGCG 4 cut(s) 447, 518, 566, 653
Bsh1285I CGRYCG 1 cut(s) 906
BshFI GGCC 2 cut(s) 472, 495
BsiEI CGRYCG 1 cut(s) 906
BsiHKAI GWGCWC 1 cut(s) 192
BsiHKCI CYCGRG 1 cut(s) 754
BsiSI CCGG 1 cut(s) 630
BslFI GGGAC 2 cut(s) 470, 726
BsmAI GTCTC 2 cut(s) 134, 418
BsmBI CGTCTC 1 cut(s) 418
BsmFI GGGAC 2 cut(s) 470, 726
BsnI GGCC 2 cut(s) 472, 495
Bso31I GGTCTC 1 cut(s) 134
BsoBI CYCGRG 1 cut(s) 754
Bsp1286I GDGCHC 2 cut(s) 192, 385
Bsp143I GATC 7 cut(s) 45, 296, 817, 856, 903, 945, 1071
Bsp68I TCGCGA 2 cut(s) 447, 518
BspACI CCGC 6 cut(s) 59, 100, 225, 402, 441, 747
BspANI GGCC 2 cut(s) 472, 495
BspCNI CTCAG 1 cut(s) 434
BspFNI CGCG 4 cut(s) 447, 518, 566, 653
BspHI TCATGA 1 cut(s) 822
BspOI GCTAGC 1 cut(s) 293
BspPI GGATC 2 cut(s) 304, 864
BspTNI GGTCTC 1 cut(s) 134
BsrBI CCGCTC 1 cut(s) 443
BsrI ACTGG 3 cut(s) 303, 709, 979
BssECI CCNNGG 1 cut(s) 81
BssMI GATC 7 cut(s) 45, 296, 817, 856, 903, 945, 1071
BssNAI GTATAC 1 cut(s) 242
Bst1107I GTATAC 1 cut(s) 242
Bst2UI CCWGG 3 cut(s) 312, 524, 854
Bst4CI ACNGT 3 cut(s) 85, 555, 937
Bst6I CTCTTC 1 cut(s) 866
BstBAI YACGTR 2 cut(s) 23, 881
BstC8I GCNNGC 3 cut(s) 291, 445, 520
BstDEI CTNAG 2 cut(s) 421, 616
BstDSI CCRYGG 1 cut(s) 81
BstF5I GGATG 2 cut(s) 231, 275
BstFNI CGCG 4 cut(s) 447, 518, 566, 653
BstHHI GCGC 1 cut(s) 655
BstKTI GATC 7 cut(s) 48, 299, 820, 859, 906, 948, 1074
BstMAI GTCTC 2 cut(s) 134, 418
BstMBI GATC 7 cut(s) 45, 296, 817, 856, 903, 945, 1071
BstMCI CGRYCG 1 cut(s) 906
BstMWI GCNNNNNNNGC 4 cut(s) 299, 440, 587, 732
BstNI CCWGG 3 cut(s) 312, 524, 854
BstNSI RCATGY 1 cut(s) 159
BstSCI CCNGG 3 cut(s) 310, 522, 852
BstSFI CTRYAG 1 cut(s) 117
BstSLI GKGCMC 1 cut(s) 385
BstUI CGCG 4 cut(s) 447, 518, 566, 653
BstV1I GCAGC 3 cut(s) 214, 273, 925
BstV2I GAAGAC 1 cut(s) 193
BstX2I RGATCY 1 cut(s) 856
BstYI RGATCY 1 cut(s) 856
BstZ17I GTATAC 1 cut(s) 242
BsuRI GGCC 2 cut(s) 472, 495
BtgI CCRYGG 1 cut(s) 81
BtgZI GCGATG 2 cut(s) 562, 956
BtrI CACGTC 2 cut(s) 500, 793
BtsCI GGATG 2 cut(s) 231, 275
BtsIMutI CAGTG 3 cut(s) 65, 288, 310
BtuMI TCGCGA 2 cut(s) 447, 518
Cac8I GCNNGC 3 cut(s) 291, 445, 520
CaiI CAGNNNCTG 1 cut(s) 916
CciI TCATGA 1 cut(s) 822
CfoI GCGC 1 cut(s) 655
Cfr13I GGNCC 2 cut(s) 308, 470
Csp6I GTAC 1 cut(s) 808
CviAII CATG 7 cut(s) 135, 156, 251, 703, 823, 1030, 1069
CviQI GTAC 1 cut(s) 808
DdeI CTNAG 2 cut(s) 421, 616
DpnI GATC 7 cut(s) 47, 298, 819, 858, 905, 947, 1073
DpnII GATC 7 cut(s) 45, 296, 817, 856, 903, 945, 1071
DrdI GACNNNNNNGTC 1 cut(s) 482
DseDI GACNNNNNNGTC 1 cut(s) 482
EaeI YGGCCR 1 cut(s) 493
Eam1104I CTCTTC 1 cut(s) 866
EarI CTCTTC 1 cut(s) 866
Ecl136II GAGCTC 1 cut(s) 190
Eco24I GRGCYC 1 cut(s) 192
Eco31I GGTCTC 1 cut(s) 134
Eco32I GATATC 1 cut(s) 427
Eco47I GGWCC 1 cut(s) 308
Eco53kI GAGCTC 1 cut(s) 190
Eco72I CACGTG 2 cut(s) 23, 881
Eco88I CYCGRG 1 cut(s) 754
EcoICRI GAGCTC 1 cut(s) 190
EcoRII CCWGG 3 cut(s) 310, 522, 852
EcoRV GATATC 1 cut(s) 427
EcoT38I GRGCYC 1 cut(s) 192
Esp3I CGTCTC 1 cut(s) 418
FaeI CATG 7 cut(s) 138, 159, 254, 706, 826, 1033, 1072
FalI AAGNNNNNCTT 2 cut(s) 185, 217
FaqI GGGAC 2 cut(s) 470, 726
FatI CATG 7 cut(s) 134, 155, 250, 702, 822, 1029, 1068
FbaI TGATCA 1 cut(s) 945
FblI GTMKAC 1 cut(s) 241
Fnu4HI GCNGC 5 cut(s) 225, 228, 287, 441, 914
FokI GGATG 2 cut(s) 218, 282
FriOI GRGCYC 1 cut(s) 192
Fsp4HI GCNGC 5 cut(s) 225, 228, 287, 441, 914
FspBI CTAG 2 cut(s) 290, 509
GlaI GCGC 1 cut(s) 654
GluI GCNGC 5 cut(s) 225, 228, 287, 441, 914
HaeIII GGCC 2 cut(s) 472, 495
HapII CCGG 1 cut(s) 630
HhaI GCGC 1 cut(s) 655
Hin1II CATG 7 cut(s) 138, 159, 254, 706, 826, 1033, 1072
Hin6I GCGC 1 cut(s) 653
HinP1I GCGC 1 cut(s) 653
HindIII AAGCTT 1 cut(s) 895
HinfI GANTC 7 cut(s) 449, 503, 568, 648, 678, 784, 991
HpaII CCGG 1 cut(s) 630
HphI GGTGA 2 cut(s) 73, 601
Hpy166II GTNNAC 2 cut(s) 242, 308
Hpy188I TCNGA 8 cut(s) 39, 162, 182, 339, 424, 647, 850, 960
Hpy188III TCNNGA 7 cut(s) 193, 446, 465, 517, 788, 823, 949
Hpy8I GTNNAC 2 cut(s) 242, 308
Hpy99I CGWCG 3 cut(s) 458, 501, 535
HpyAV CCTTC 3 cut(s) 245, 386, 1040
HpyCH4III ACNGT 3 cut(s) 85, 555, 937
HpyCH4IV ACGT 7 cut(s) 22, 32, 499, 533, 792, 813, 880
HpyF10VI GCNNNNNNNGC 4 cut(s) 299, 440, 587, 732
HpyF3I CTNAG 2 cut(s) 421, 616
HpySE526I ACGT 7 cut(s) 22, 32, 499, 533, 792, 813, 880
Hsp92II CATG 7 cut(s) 138, 159, 254, 706, 826, 1033, 1072
HspAI GCGC 1 cut(s) 653
Ksp22I TGATCA 1 cut(s) 945
Kzo9I GATC 7 cut(s) 45, 296, 817, 856, 903, 945, 1071
LmnI GCTCC 1 cut(s) 118
Lsp1109I GCAGC 3 cut(s) 214, 273, 925
LweI GCATC 2 cut(s) 100, 287
MaeI CTAG 2 cut(s) 290, 509
MaeII ACGT 7 cut(s) 22, 32, 499, 533, 792, 813, 880
MaeIII GTNAC 3 cut(s) 61, 500, 635
MalI GATC 7 cut(s) 47, 298, 819, 858, 905, 947, 1073
MbiI CCGCTC 1 cut(s) 443
MboI GATC 7 cut(s) 45, 296, 817, 856, 903, 945, 1071
MboII GAAGA 5 cut(s) 193, 550, 706, 853, 1055
MfeI CAATTG 1 cut(s) 1000
MflI RGATCY 1 cut(s) 856
MhlI GDGCHC 2 cut(s) 192, 385
MluCI AATT 1 cut(s) 1000
MlyI GAGTC 4 cut(s) 497, 577, 672, 793
MnlI CCTC 9 cut(s) 38, 82, 395, 440, 461, 611, 737, 867, 1048
MroXI GAANNNNTTC 2 cut(s) 200, 710
MseI TTAA 3 cut(s) 369, 536, 971
MslI CAYNNNNRTG 2 cut(s) 249, 767
MspA1I CMGCKG 2 cut(s) 227, 916
MspI CCGG 1 cut(s) 630
MspR9I CCNGG 3 cut(s) 312, 524, 854
MunI CAATTG 1 cut(s) 1000
MvaI CCWGG 3 cut(s) 312, 524, 854
MvnI CGCG 4 cut(s) 447, 518, 566, 653
MwoI GCNNNNNNNGC 4 cut(s) 299, 440, 587, 732
NdeII GATC 7 cut(s) 45, 296, 817, 856, 903, 945, 1071
NheI GCTAGC 1 cut(s) 289
NlaIII CATG 7 cut(s) 138, 159, 254, 706, 826, 1033, 1072
NmuCI GTSAC 3 cut(s) 61, 500, 635
NruI TCGCGA 2 cut(s) 447, 518
NspI RCATGY 1 cut(s) 159
OliI CACNNNNGTG 1 cut(s) 767
PaeR7I CTCGAG 1 cut(s) 754
PagI TCATGA 1 cut(s) 822
PcsI WCGNNNNNNNCGW 1 cut(s) 444
PdmI GAANNNNTTC 2 cut(s) 200, 710
PfeI GAWTC 3 cut(s) 449, 648, 991
PkrI GCNGC 5 cut(s) 226, 229, 288, 442, 915
Ple19I CGATCG 1 cut(s) 906
PleI GAGTC 4 cut(s) 497, 576, 672, 792
PmaCI CACGTG 2 cut(s) 23, 881
PmlI CACGTG 2 cut(s) 23, 881
PpsI GAGTC 4 cut(s) 497, 576, 672, 792
Ppu21I YACGTR 2 cut(s) 23, 881
PshBI ATTAAT 1 cut(s) 369
Psp124BI GAGCTC 1 cut(s) 192
Psp6I CCWGG 3 cut(s) 310, 522, 852
PspCI CACGTG 2 cut(s) 23, 881
PspGI CCWGG 3 cut(s) 310, 522, 852
PspPI GGNCC 2 cut(s) 308, 470
PspXI VCTCGAGB 1 cut(s) 754
PstNI CAGNNNCTG 1 cut(s) 916
PsuI RGATCY 1 cut(s) 856
PvuI CGATCG 1 cut(s) 906
PvuII CAGCTG 1 cut(s) 916
RruI TCGCGA 2 cut(s) 447, 518
RsaI GTAC 1 cut(s) 809
RsaNI GTAC 1 cut(s) 808
RseI CAYNNNNRTG 2 cut(s) 249, 767
SacI GAGCTC 1 cut(s) 192
SaqAI TTAA 3 cut(s) 369, 536, 971
SatI GCNGC 5 cut(s) 225, 228, 287, 441, 914
Sau3AI GATC 7 cut(s) 45, 296, 817, 856, 903, 945, 1071
Sau96I GGNCC 2 cut(s) 308, 470
ScaI AGTACT 1 cut(s) 809
SchI GAGTC 4 cut(s) 497, 577, 672, 793
ScrFI CCNGG 3 cut(s) 312, 524, 854
SduI GDGCHC 2 cut(s) 192, 385
SfaNI GCATC 2 cut(s) 100, 287
SfcI CTRYAG 1 cut(s) 117
Sfr274I CTCGAG 1 cut(s) 754
SinI GGWCC 1 cut(s) 308
SlaI CTCGAG 1 cut(s) 754
SmiMI CAYNNNNRTG 2 cut(s) 249, 767
SmlI CTYRAG 2 cut(s) 191, 754
SmoI CTYRAG 2 cut(s) 191, 754
Sse9I AATT 1 cut(s) 1000
SsiI CCGC 6 cut(s) 59, 100, 225, 402, 441, 747
SspMI CTAG 2 cut(s) 290, 509
SstI GAGCTC 1 cut(s) 192
StyD4I CCNGG 3 cut(s) 310, 522, 852
TaaI ACNGT 3 cut(s) 85, 555, 937
TaiI ACGT 7 cut(s) 25, 35, 502, 536, 795, 816, 883
TaqI TCGA 4 cut(s) 168, 755, 798, 906
TaqII GACCGA 1 cut(s) 690
TasI AATT 1 cut(s) 1000
TatI WGTACW 1 cut(s) 807
TauI GCSGC 2 cut(s) 227, 443
TfiI GAWTC 3 cut(s) 449, 648, 991
Tru1I TTAA 3 cut(s) 369, 536, 971
Tru9I TTAA 3 cut(s) 369, 536, 971
TscAI CASTG 3 cut(s) 72, 288, 310
TseFI GTSAC 3 cut(s) 61, 500, 635
TseI GCWGC 3 cut(s) 227, 286, 913
Tsp45I GTSAC 3 cut(s) 61, 500, 635
TspDTI ATGAA 3 cut(s) 719, 839, 1018
TspGWI ACGGA 3 cut(s) 442, 651, 1024
TspRI CASTG 3 cut(s) 72, 288, 310
VpaK11BI GGWCC 1 cut(s) 308
VspI ATTAAT 1 cut(s) 369
XceI RCATGY 1 cut(s) 159
XhoI CTCGAG 1 cut(s) 754
XmiI GTMKAC 1 cut(s) 241
XmnI GAANNNNTTC 2 cut(s) 200, 710
XspI CTAG 2 cut(s) 290, 509
ZrmI AGTACT 1 cut(s) 809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.