AT1G73220

Sugar (and other) transporter

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
27538190 .. 27540235
2046 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G73220.1

Sequence Viewer

Length: 1620 bp
ATGGAACCTTCAAAACAAGAAGTTCCAAAGCTCATGGAGACACCACCGAACATATCAAACGATTCATCAGCAACCGAGAAAGGAGAAGCAACAAGGCAACAACAGCTACCAAACAATAGGTACGCACTCACAGTTGACGAGGTGATCGAGCAACACATTGGAGCACTTGGGTTTGCTCAGATCTTGCATGCTCTCTTGGTCTCTATCGCTTGGATCTTCGATGCTCAGACCACTCTTATATCCATTTTCTCCGATGCTCAGCCCGCGGCGAGGCTTCTTGCAACCGGTGCCATCGTGGAGGGTGCCTCCTTGTGTGGATTGGCCAGTGGAGAATGGGAATGGATTGGACCAAAGAGTGACACTGTTGTTTCTGAGTGGAATCTCATATGTCAACATAAATTTCTTGTGGCTGTTCCTTCCACACTATTCTTCATCGGATCTCTTTTCGGTTCTGGTGTGTATGGATATCTTGCTGATTCATGGTTTGGTCGAAAGAAGACTTTATTACTCTCTTGTGTATTAACTTTCGTCACGGCCTTTGCGATCTCTTTTTCACCAAACGTTTGGGTTTATGCATTCTTGCGTTTTGCCAACGGTTTCTTTAGATCAGGAATTGGGTCTTGTTGTATCGTACTCGCAACTGAGATTGTTGGCAAAAAGTGGCGAGGCCAAGTAGGGCAATACGGTTTCTTCTTCTTCACGTTAGGTTTTCTATCTCTACCACTCATGGCTTACTTGGAGAGAAAGTCCTGGAGAAATCTTTACCGGATCATATCCTTTCTTCCTCTTGGATACGCGGTTTGTCTCCTGCCCTTTGCTTATGAGTCTCCTCGATGGCTTCTTGTCAAGGGACGTAATAAAGAAGCCATGGTGGTCTTGAAGAAACTCGCGAGGCTCAACGGGAAACAACTTCCGGCGGATCTAAGCCTAGTCGATCCAATTCCAGAGAGAGATGATCAAACTTCATCATCGGAGAAGTTTTGGAAAACAAAATGGGCAGTGAAAAGAATCATAATGGTTATGATGGCTGGATTTGGCAGTGGCTTTGTTTATTATGGAATTCAACTAAATGCTGAAAATCTCAACTTCAATCTTTACTTAACTGTTGCTGTTAACGCTCTGATGGAGTTTCCAGCGGTTTTCATCGGAAGCTTCCTCCTCGGGGTCATGAACCGCCGTCCACTATTCTCGAATTCATCATACCTCGCCGGATTCGCGTGTCTGCTCTGCGCGGTTCTCTCGATCCACCGCGTGATCCGTGCGATATCTGTGGCAAAATGGTTACAACTTGCAGTTGAGGCGGTTGGGTTCATGGCATCCTCGACAGCGTATGACGTCCTATATGTCTACTGCGTAGAGCTGTTCCCAACAAACGTTAGGAACACTGCTGTCTCACTTTTGCGTCAAGCGTTTATGCTAGGAGCGTCTGCAGCACCACTGCTAGTTGCGTTAGGAAGGGAAAGCGCAATGATGTCGTTCATCGTGTTTGGTGTTGCATCAGTGCTGAGCGGCATCGTGAGTCTCTGGCTACGAGAAACTCGAAACGCTCCGCTTTACGAAACACTAGCACAACAGGGGAAAGCGGAAGAGATCGAAAACGAAACAATCATGATTACTTGA

Protein Analysis

539

Amino Acids

59.66

Weight (kDa)

8.72

Isoelectric Point (pI)

36.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 138 - 479 1.4e-24 Major Facilitator Superfamily
Sugar_tr PF00083 140 - 520 1e-33 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012192)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1338
AccB1I GGYRCC 2 cut(s) 287, 302
AccBSI CCGCTC 1 cut(s) 1509
AccI GTMKAC 1 cut(s) 1347
AccII CGCG 6 cut(s) 266, 797, 890, 1217, 1232, 1251
AclI AACGTT 2 cut(s) 561, 1374
AclWI GGATC 7 cut(s) 221, 445, 776, 927, 929, 1237, 1249
AcoI YGGCCR 1 cut(s) 321
AcsI RAATTY 3 cut(s) 398, 1059, 1192
AcyI GRCGYC 1 cut(s) 1335
AdeI CACNNNGTG 1 cut(s) 1252
AfaI GTAC 2 cut(s) 122, 633
AfiI CCNNNNNNNGG 2 cut(s) 270, 1162
AgeI ACCGGT 1 cut(s) 284
AgsI TTSAA 4 cut(s) 12, 880, 1064, 1090
AjnI CCWGG 1 cut(s) 749
AluBI AGCT 4 cut(s) 31, 106, 1152, 1360
AluI AGCT 4 cut(s) 31, 106, 1152, 1360
Alw21I GWGCWC 1 cut(s) 166
Alw26I GTCTC 6 cut(s) 32, 205, 809, 831, 1396, 1526
AlwI GGATC 7 cut(s) 221, 445, 776, 927, 929, 1237, 1249
Ama87I CYCGRG 1 cut(s) 1160
AoxI GGCC 3 cut(s) 321, 534, 667
ApeKI GCWGC 1 cut(s) 1430
ApoI RAATTY 3 cut(s) 398, 1059, 1192
AsiGI ACCGGT 1 cut(s) 284
AspLEI GCGC 2 cut(s) 1232, 1466
AspS9I GGNCC 1 cut(s) 347
AsuHPI GGTGA 2 cut(s) 154, 546
AvaI CYCGRG 1 cut(s) 1160
AvaII GGWCC 1 cut(s) 347
BalI TGGCCA 1 cut(s) 323
BanI GGYRCC 2 cut(s) 287, 302
BbsI GAAGAC 1 cut(s) 503
Bbv12I GWGCWC 1 cut(s) 166
BbvI GCAGC 1 cut(s) 1442
BccI CCATC 4 cut(s) 299, 828, 1018, 1117
BceAI ACGGC 2 cut(s) 549, 1161
BcgI CGANNNNNNTGC 2 cut(s) 1455, 1489
BciT130I CCWGG 1 cut(s) 751
BciVI GTATCC 1 cut(s) 785
BclI TGATCA 1 cut(s) 955
BcoDI GTCTC 6 cut(s) 32, 205, 809, 831, 1396, 1526
BfaI CTAG 4 cut(s) 929, 1418, 1442, 1565
BfmI CTRYAG 1 cut(s) 1428
BfuI GTATCC 1 cut(s) 785
BglII AGATCT 1 cut(s) 180
BisI GCNGC 3 cut(s) 267, 1431, 1510
BlpI GCTNAGC 2 cut(s) 258, 1505
BlsI GCNGC 3 cut(s) 268, 1432, 1511
Bme1390I CCNGG 1 cut(s) 751
Bme18I GGWCC 1 cut(s) 347
BmeT110I CYCGRG 1 cut(s) 1160
BmgT120I GGNCC 1 cut(s) 347
BmiI GGNNCC 3 cut(s) 6, 289, 304
BmrFI CCNGG 1 cut(s) 751
BmsI GCATC 5 cut(s) 211, 244, 1325, 1505, 1521
BpiI GAAGAC 1 cut(s) 503
BplI GAGNNNNNCTC 2 cut(s) 290, 322
BpmI CTGGAG 1 cut(s) 772
Bpu1102I GCTNAGC 2 cut(s) 258, 1505
BsaHI GRCGYC 1 cut(s) 1335
BsaI GGTCTC 1 cut(s) 205
BsaJI CCNNGG 3 cut(s) 264, 867, 1159
BsaWI WCCGGW 2 cut(s) 284, 765
BsaXI ACNNNNNCTCC 2 cut(s) 731, 761
Bsc4I CCNNNNNNNGG 2 cut(s) 270, 1162
Bse118I RCCGGY 1 cut(s) 284
Bse1I ACTGG 1 cut(s) 324
Bse3DI GCAATG 1 cut(s) 1473
BseBI CCWGG 1 cut(s) 751
BseDI CCNNGG 3 cut(s) 264, 867, 1159
BseGI GGATG 1 cut(s) 1316
BseLI CCNNNNNNNGG 2 cut(s) 270, 1162
BseMI GCAATG 1 cut(s) 1473
BseMII CTCAG 6 cut(s) 191, 239, 272, 363, 633, 1496
BseNI ACTGG 1 cut(s) 324
BseRI GAGGAG 2 cut(s) 819, 1148
BseXI GCAGC 1 cut(s) 1442
Bsh1236I CGCG 6 cut(s) 266, 797, 890, 1217, 1232, 1251
BshFI GGCC 3 cut(s) 323, 536, 669
BshNI GGYRCC 2 cut(s) 287, 302
BshTI ACCGGT 1 cut(s) 284
BsiHKAI GWGCWC 1 cut(s) 166
BsiHKCI CYCGRG 1 cut(s) 1160
BsiSI CCGG 4 cut(s) 285, 766, 914, 1209
BslFI GGGAC 1 cut(s) 864
BslI CCNNNNNNNGG 2 cut(s) 270, 1162
BsmAI GTCTC 6 cut(s) 32, 205, 809, 831, 1396, 1526
BsmFI GGGAC 1 cut(s) 864
BsmI GAATGC 1 cut(s) 575
BsnI GGCC 3 cut(s) 323, 536, 669
Bso31I GGTCTC 1 cut(s) 205
BsoBI CYCGRG 1 cut(s) 1160
Bsp1286I GDGCHC 1 cut(s) 166
Bsp1720I GCTNAGC 2 cut(s) 258, 1505
Bsp19I CCATGG 1 cut(s) 867
Bsp68I TCGCGA 1 cut(s) 890
BspANI GGCC 3 cut(s) 323, 536, 669
BspCNI CTCAG 6 cut(s) 190, 238, 271, 364, 634, 1497
BspFNI CGCG 6 cut(s) 266, 797, 890, 1217, 1232, 1251
BspHI TCATGA 2 cut(s) 1167, 1608
BspLI GGNNCC 3 cut(s) 6, 289, 304
BspMAI CTGCAG 1 cut(s) 1432
BspPI GGATC 7 cut(s) 221, 445, 776, 927, 929, 1237, 1249
BspT107I GGYRCC 2 cut(s) 287, 302
BspTNI GGTCTC 1 cut(s) 205
BsrBI CCGCTC 1 cut(s) 1509
BsrDI GCAATG 1 cut(s) 1473
BsrFI RCCGGY 1 cut(s) 284
BsrI ACTGG 1 cut(s) 324
BssAI RCCGGY 1 cut(s) 284
BssECI CCNNGG 3 cut(s) 264, 867, 1159
BssNI GRCGYC 1 cut(s) 1335
BssT1I CCWWGG 1 cut(s) 867
Bst2UI CCWGG 1 cut(s) 751
Bst4CI ACNGT 5 cut(s) 133, 364, 596, 686, 1105
Bst6I CTCTTC 1 cut(s) 1581
BstACI GRCGYC 1 cut(s) 1335
BstAPI GCANNNNNTGC 1 cut(s) 287
BstC8I GCNNGC 2 cut(s) 189, 264
BstDEI CTNAG 7 cut(s) 177, 225, 258, 372, 642, 923, 1505
BstDSI CCRYGG 2 cut(s) 264, 867
BstF5I GGATG 1 cut(s) 1316
BstFNI CGCG 6 cut(s) 266, 797, 890, 1217, 1232, 1251
BstHHI GCGC 2 cut(s) 1232, 1466
BstMAI GTCTC 6 cut(s) 32, 205, 809, 831, 1396, 1526
BstMWI GCNNNNNNNGC 7 cut(s) 103, 263, 287, 1115, 1214, 1298, 1430
BstNI CCWGG 1 cut(s) 751
BstNSI RCATGY 1 cut(s) 191
BstSCI CCNGG 1 cut(s) 749
BstSFI CTRYAG 1 cut(s) 1428
BstUI CGCG 6 cut(s) 266, 797, 890, 1217, 1232, 1251
BstV1I GCAGC 1 cut(s) 1442
BstV2I GAAGAC 1 cut(s) 503
BstX2I RGATCY 4 cut(s) 180, 213, 437, 919
BstXI CCANNNNNNTGG 1 cut(s) 564
BstYI RGATCY 4 cut(s) 180, 213, 437, 919
BsuI GTATCC 1 cut(s) 785
BsuRI GGCC 3 cut(s) 323, 536, 669
BtgI CCRYGG 2 cut(s) 264, 867
BtsCI GGATG 1 cut(s) 1316
BtsI GCAGTG 4 cut(s) 1005, 1045, 1383, 1436
BtsIMutI CAGTG 7 cut(s) 331, 360, 1005, 1045, 1383, 1436, 1506
BtuMI TCGCGA 1 cut(s) 890
Cac8I GCNNGC 2 cut(s) 189, 264
CciI TCATGA 2 cut(s) 1167, 1608
CfoI GCGC 2 cut(s) 1232, 1466
Cfr10I RCCGGY 1 cut(s) 284
Cfr13I GGNCC 1 cut(s) 347
Cfr42I CCGCGG 1 cut(s) 267
CseI GACGC 2 cut(s) 1391, 1413
Csp6I GTAC 2 cut(s) 121, 632
CspAI ACCGGT 1 cut(s) 284
CviAII CATG 8 cut(s) 34, 188, 480, 727, 868, 1168, 1312, 1609
CviQI GTAC 2 cut(s) 121, 632
DdeI CTNAG 7 cut(s) 177, 225, 258, 372, 642, 923, 1505
DraIII CACNNNGTG 1 cut(s) 1252
EaeI YGGCCR 1 cut(s) 321
Eam1104I CTCTTC 1 cut(s) 1581
EarI CTCTTC 1 cut(s) 1581
EciI GGCGGA 1 cut(s) 932
Eco130I CCWWGG 1 cut(s) 867
Eco31I GGTCTC 1 cut(s) 205
Eco32I GATATC 2 cut(s) 467, 1266
Eco47I GGWCC 1 cut(s) 347
Eco88I CYCGRG 1 cut(s) 1160
EcoRI GAATTC 2 cut(s) 1059, 1192
EcoRII CCWGG 1 cut(s) 749
EcoRV GATATC 2 cut(s) 467, 1266
EcoT14I CCWWGG 1 cut(s) 867
EcoT22I ATGCAT 1 cut(s) 577
ErhI CCWWGG 1 cut(s) 867
FaeI CATG 8 cut(s) 37, 191, 483, 730, 871, 1171, 1315, 1612
FaqI GGGAC 1 cut(s) 864
FatI CATG 8 cut(s) 33, 187, 479, 726, 867, 1167, 1311, 1608
FauI CCCGC 1 cut(s) 271
FauNDI CATATG 1 cut(s) 386
FbaI TGATCA 1 cut(s) 955
FblI GTMKAC 1 cut(s) 1347
Fnu4HI GCNGC 3 cut(s) 267, 1431, 1510
FokI GGATG 1 cut(s) 1303
Fsp4HI GCNGC 3 cut(s) 267, 1431, 1510
FspBI CTAG 4 cut(s) 929, 1418, 1442, 1565
GlaI GCGC 2 cut(s) 1231, 1465
GluI GCNGC 3 cut(s) 267, 1431, 1510
GsuI CTGGAG 1 cut(s) 772
HaeIII GGCC 3 cut(s) 323, 536, 669
HapII CCGG 4 cut(s) 285, 766, 914, 1209
HgaI GACGC 2 cut(s) 1391, 1413
HhaI GCGC 2 cut(s) 1232, 1466
Hin1I GRCGYC 1 cut(s) 1335
Hin1II CATG 8 cut(s) 37, 191, 483, 730, 871, 1171, 1315, 1612
Hin6I GCGC 2 cut(s) 1230, 1464
HinP1I GCGC 2 cut(s) 1230, 1464
HincII GTYRAC 3 cut(s) 136, 392, 1114
HindII GTYRAC 3 cut(s) 136, 392, 1114
HindIII AAGCTT 1 cut(s) 1150
HinfI GANTC 7 cut(s) 62, 379, 476, 824, 1008, 1212, 1519
HpaI GTTAAC 1 cut(s) 1114
HpaII CCGG 4 cut(s) 285, 766, 914, 1209
HphI GGTGA 2 cut(s) 154, 546
Hpy166II GTNNAC 5 cut(s) 136, 392, 1114, 1181, 1348
Hpy188I TCNGA 8 cut(s) 180, 228, 253, 373, 437, 973, 1122, 1148
Hpy188III TCNNGA 9 cut(s) 609, 877, 889, 944, 1168, 1189, 1240, 1516, 1609
Hpy8I GTNNAC 5 cut(s) 136, 392, 1114, 1181, 1348
HpyAV CCTTC 3 cut(s) 18, 426, 1449
HpyCH4III ACNGT 5 cut(s) 133, 364, 596, 686, 1105
HpyCH4IV ACGT 5 cut(s) 561, 701, 853, 1335, 1374
HpyCH4V TGCA 6 cut(s) 187, 281, 575, 1292, 1430, 1496
HpyF10VI GCNNNNNNNGC 7 cut(s) 103, 263, 287, 1115, 1214, 1298, 1430
HpyF3I CTNAG 7 cut(s) 177, 225, 258, 372, 642, 923, 1505
HpySE526I ACGT 5 cut(s) 561, 701, 853, 1335, 1374
Hsp92I GRCGYC 1 cut(s) 1335
Hsp92II CATG 8 cut(s) 37, 191, 483, 730, 871, 1171, 1315, 1612
HspAI GCGC 2 cut(s) 1230, 1464
Ksp22I TGATCA 1 cut(s) 955
KspAI GTTAAC 1 cut(s) 1114
KspI CCGCGG 1 cut(s) 267
LmnI GCTCC 3 cut(s) 161, 1421, 1552
Lsp1109I GCAGC 1 cut(s) 1442
LweI GCATC 5 cut(s) 211, 244, 1325, 1505, 1521
MaeI CTAG 4 cut(s) 929, 1418, 1442, 1565
MaeII ACGT 5 cut(s) 561, 701, 853, 1335, 1374
MaeIII GTNAC 3 cut(s) 356, 529, 1281
MbiI CCGCTC 1 cut(s) 1509
MboII GAAGA 9 cut(s) 208, 421, 508, 682, 685, 688, 773, 892, 1598
MflI RGATCY 4 cut(s) 180, 213, 437, 919
MhlI GDGCHC 1 cut(s) 166
MlsI TGGCCA 1 cut(s) 323
MluCI AATT 5 cut(s) 398, 612, 939, 1059, 1192
MluNI TGGCCA 1 cut(s) 323
MlyI GAGTC 2 cut(s) 833, 1528
Mox20I TGGCCA 1 cut(s) 323
Mph1103I ATGCAT 1 cut(s) 577
MscI TGGCCA 1 cut(s) 323
MseI TTAA 3 cut(s) 521, 1100, 1113
Msp20I TGGCCA 1 cut(s) 323
MspA1I CMGCKG 2 cut(s) 266, 1136
MspI CCGG 4 cut(s) 285, 766, 914, 1209
MspR9I CCNGG 1 cut(s) 751
Mva1269I GAATGC 1 cut(s) 575
MvaI CCWGG 1 cut(s) 751
MvnI CGCG 6 cut(s) 266, 797, 890, 1217, 1232, 1251
MwoI GCNNNNNNNGC 7 cut(s) 103, 263, 287, 1115, 1214, 1298, 1430
NcoI CCATGG 1 cut(s) 867
NdeI CATATG 1 cut(s) 386
NlaIII CATG 8 cut(s) 37, 191, 483, 730, 871, 1171, 1315, 1612
NlaIV GGNNCC 3 cut(s) 6, 289, 304
NmuCI GTSAC 2 cut(s) 356, 529
NruI TCGCGA 1 cut(s) 890
NsiI ATGCAT 1 cut(s) 577
NspI RCATGY 1 cut(s) 191
PaeI GCATGC 1 cut(s) 191
PagI TCATGA 2 cut(s) 1167, 1608
PcsI WCGNNNNNNNCGW 3 cut(s) 144, 539, 1537
PctI GAATGC 1 cut(s) 575
PfeI GAWTC 5 cut(s) 62, 379, 476, 1008, 1212
PfoI TCCNGGA 1 cut(s) 749
PinAI ACCGGT 1 cut(s) 284
PkrI GCNGC 3 cut(s) 268, 1432, 1511
PleI GAGTC 2 cut(s) 832, 1527
PpsI GAGTC 2 cut(s) 832, 1527
Psp1406I AACGTT 2 cut(s) 561, 1374
Psp6I CCWGG 1 cut(s) 749
PspGI CCWGG 1 cut(s) 749
PspN4I GGNNCC 3 cut(s) 6, 289, 304
PspPI GGNCC 1 cut(s) 347
PstI CTGCAG 1 cut(s) 1432
PsuI RGATCY 4 cut(s) 180, 213, 437, 919
RruI TCGCGA 1 cut(s) 890
RsaI GTAC 2 cut(s) 122, 633
RsaNI GTAC 2 cut(s) 121, 632
SacII CCGCGG 1 cut(s) 267
SaqAI TTAA 3 cut(s) 521, 1100, 1113
SatI GCNGC 3 cut(s) 267, 1431, 1510
Sau96I GGNCC 1 cut(s) 347
SchI GAGTC 2 cut(s) 833, 1528
ScrFI CCNGG 1 cut(s) 751
SduI GDGCHC 1 cut(s) 166
SfaNI GCATC 5 cut(s) 211, 244, 1325, 1505, 1521
SfcI CTRYAG 1 cut(s) 1428
Sfr303I CCGCGG 1 cut(s) 267
SgrBI CCGCGG 1 cut(s) 267
SinI GGWCC 1 cut(s) 347
SphI GCATGC 1 cut(s) 191
Sse9I AATT 5 cut(s) 398, 612, 939, 1059, 1192
SspMI CTAG 4 cut(s) 929, 1418, 1442, 1565
StyD4I CCNGG 1 cut(s) 749
StyI CCWWGG 1 cut(s) 867
TaaI ACNGT 5 cut(s) 133, 364, 596, 686, 1105
TaiI ACGT 5 cut(s) 564, 704, 856, 1338, 1377
TasI AATT 5 cut(s) 398, 612, 939, 1059, 1192
TauI GCSGC 2 cut(s) 269, 1512
TfiI GAWTC 5 cut(s) 62, 379, 476, 1008, 1212
Tru1I TTAA 3 cut(s) 521, 1100, 1113
Tru9I TTAA 3 cut(s) 521, 1100, 1113
TscAI CASTG 7 cut(s) 331, 367, 1005, 1045, 1390, 1443, 1506
TseFI GTSAC 2 cut(s) 356, 529
TseI GCWGC 1 cut(s) 1430
Tsp45I GTSAC 2 cut(s) 356, 529
TspDTI ATGAA 9 cut(s) 54, 421, 468, 954, 1132, 1184, 1185, 1300, 1468
TspGWI ACGGA 1 cut(s) 1247
TspRI CASTG 7 cut(s) 331, 367, 1005, 1045, 1390, 1443, 1506
VpaK11BI GGWCC 1 cut(s) 347
XapI RAATTY 3 cut(s) 398, 1059, 1192
XceI RCATGY 1 cut(s) 191
XmiI GTMKAC 1 cut(s) 1347
XspI CTAG 4 cut(s) 929, 1418, 1442, 1565
ZraI GACGTC 1 cut(s) 1336
Zsp2I ATGCAT 1 cut(s) 577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.