Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0012192

Physical Location & Seq

Genomic Coordinates Forward (+)

45494859 .. 45499185

Gene Structure 4327 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG340400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGACTTCATGTGATCCGGGTGACCGGAGCTCCGATCTCCGGGCACCCCTCATCTTTGCTTCAAAGAAATCCGCAGCAGCGAACGAAAAGGAGAAGCTATGCATCGACGACATGCTCCAAAAGTATTGCGGCGAGTTCGGGCCGTGGCAGGTTTGGCACTTCGTGCTGACCAGCTTGGCTTGGGCTCTGGAGGCGTTTCACACCATGGTCATGATCTTCGCGGACCGTGAACCCAGCTGGAGATGTCTGGATGGGTATTCGGGCTGTGATTCTAACGCGCCGAGCGTCTGTGGGCTCACACCGGGCTCGTGGGAGTGGCTCGGTGGTCCGGTGAGTTCAACGGTGGCGGAATGGGGTCTGGTTTGTGAAGAGAAGTATAAAGTTGGGTTGGCTCAGGCCTTGTTCTTCGGCGGCTGTATGATTGGTGCGGGAGTTTTTGGGCATTTTTCAGACTCATTCCTTGGAAGAAAAGGCTCCTTAACGGCAGTATGCGTATTAAACACCATCTTTGGTTGCTTAACGGCATTCTCCCCAAACTACTGGGGCTACGTAGTCTTCCGTTTCCTCACCGGCTTCAGCACCGGTGGCGTAGGGCTCTGCGCCTTTGTCCTCGCAACTGAACCTGTAGGCCCTACAAAGCGTGGGGCCGCAGGAATGTCCACATTCTACTTCTTCTCAACCGGCATCGCACTACTTGCAGGCATAGCCTACATTTACCCATCATGGCGCGAACTCTACATTGCCTCATCGATCCCCTCCTTCCTCTTCCTCGTCGCAGTCCTTCCCTTCCTCTCGGAGTCCCCGAGGTGGTACCTTGTACGAGGCAAAGTTAATGAGGCCACAAAACTCATGCGTGCCATTGCCAAGTCAAATGGAAACCACCTCCCCAGTGGAGTCGTCCTAACCCTAGACGAAGACACAAACGACACTGATCACCACCATGAAACTTGCTTGAGCTCCAATGACAAAGAAGCCATGAGTGGTTCCCTCATTGATGTGATCAAGTCACCAATGACTAGAATCCGGTTGTTTCTAGCGGTTGCCATAAACTTCTCGTGCTCAGTTGTGTACTACGGCCTGAGCTTGAACGTTGTCAACCTAGGCACCAACCTCTATCTCAATGTACTGCTCAATGCGGTTGCAGAAATGCCAGCATTTACAATCACGGCGATATTACTCGATAAGTACGGAAGGAAGCCACTGGCCATCGGGACGCTGTGGTTTAGTGGAATTTTCTGCCTTGTTGGGAGCTTGATGAAGAGCAGTGGGATTTGGAAAGTTGTGAGAATGGTGTGTGGGATTTTAGGGATATTTGGAATGGCGGGGACTTACAATTTGTTGTTTATTTACACTATGGAGTTGTTTCCTACAGTCGTTAGGAATGCGGCTCTCGGTTGTGCAACACAGGCGGCGCAAATGGGGGCGATTCTTGCACCATTCGTGGTGGTTTTGGGGGGCGGTTTGCCATTTGCGGTGTTCGCAGCGTGTGGGATTGCAGGGGGAGTGTTTGCATTTTATCTGCCGGAGACGTTGAATAAGCCTTTGTATGATACGATGGCTGGGATGGAGGATGGGGAGAGTACTCTTAGTACTGCTACTGTCTGCACAAGTACTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0007154 GO:0008150 GO:0008509 GO:0008514 GO:0009414 GO:0009415 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009605 GO:0009628 GO:0009705 GO:0009987 GO:0009991 GO:0010035 GO:0015075 GO:0015711 GO:0016020 GO:0016021 GO:0022857 GO:0031090 GO:0031224 GO:0031668 GO:0031976 GO:0031984 GO:0033554 GO:0034220 GO:0034357 GO:0042221 GO:0042631 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055035 GO:0055085 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071702 GO:0098588 GO:0098656 GO:0098805 GO:0104004 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko05231 map05231

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

539

Amino Acids

58.02

Weight (kDa)

6.01

Isoelectric Point (pI)

31.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	125 - 516	8.4e-34	Sugar (and other) transporter
MFS_1	PF07690	128 - 479	1.1e-18	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012192)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73220 AT3G20660
fragaria_vesca	FvH4_6g28280
malus_domestica	MD03G1215000.v1.1 MD11G1229700.v1.1
prunus_persica	Prupe.4G197800_v2.0.a1
pyrus_communis	pycom03g16350 pycom11g20340
rosa_chinensis	RchiOBHm_Chr2g0132341
rosa_laevigata	RLG00000019247
rosa_multiflora	Rmu_sc0000781.1_g000003 Rmu_sc0002795.1_g000003
rosa_roxburghii	Rroxscaffold_2G00112150
rosa_rugosa	Rorug02G0303700
rosa_samantha	Rh2AG356800 Rh2BG363300 Rh2CG340400 Rh2DG380100
rosa_wichuraiana	Rw2G029010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	139
Acc65I	GGTACC	1 cut(s)	810
AccB1I	GGYRCC	3 cut(s)	43, 810, 1103
AccII	CGCG	3 cut(s)	221, 278, 729
AclI	AACGTT	1 cut(s)	1089
AclWI	GGATC	2 cut(s)	8, 745
AcoI	YGGCCR	1 cut(s)	1203
AcsI	RAATTY	1 cut(s)	1230
AcuI	CTGAAG	1 cut(s)	559
AdeI	CACNNNGTG	1 cut(s)	163
AfaI	GTAC	8 cut(s)	812, 819, 1070, 1125, 1187, 1582, 1591, 1612
AfiI	CCNNNNNNNGG	2 cut(s)	39, 807
AgeI	ACCGGT	1 cut(s)	581
AgsI	TTSAA	4 cut(s)	63, 339, 1087, 1534
AluBI	AGCT	7 cut(s)	30, 97, 174, 237, 957, 1083, 1251
AluI	AGCT	7 cut(s)	30, 97, 174, 237, 957, 1083, 1251
Alw21I	GWGCWC	3 cut(s)	32, 959, 1061
Alw26I	GTCTC	1 cut(s)	1520
AlwI	GGATC	2 cut(s)	8, 745
Ama87I	CYCGRG	1 cut(s)	802
AoxI	GGCC	7 cut(s)	140, 396, 628, 645, 837, 1075, 1203
ApeKI	GCWGC	3 cut(s)	74, 77, 1481
ApoI	RAATTY	1 cut(s)	1230
ArsI	GACNNNNNNTTYG	2 cut(s)	1318, 1350
AsiGI	ACCGGT	1 cut(s)	581
Asp718I	GGTACC	1 cut(s)	810
AspA2I	CCTAGG	1 cut(s)	1099
AspLEI	GCGC	4 cut(s)	280, 602, 729, 1414
AspS9I	GGNCC	5 cut(s)	140, 223, 326, 629, 645
AsuC2I	CCSGG	3 cut(s)	18, 41, 303
AsuHPI	GGTGA	5 cut(s)	32, 343, 559, 926, 999
AvaI	CYCGRG	1 cut(s)	802
AvaII	GGWCC	2 cut(s)	223, 326
AvrII	CCTAGG	1 cut(s)	1099
BaeGI	GKGCMC	1 cut(s)	46
BalI	TGGCCA	1 cut(s)	1205
BanI	GGYRCC	3 cut(s)	43, 810, 1103
BanII	GRGCYC	6 cut(s)	32, 187, 297, 308, 597, 959
BauI	CACGAG	2 cut(s)	307, 1054
BbsI	GAAGAC	2 cut(s)	547, 921
Bbv12I	GWGCWC	3 cut(s)	32, 959, 1061
BbvI	GCAGC	3 cut(s)	86, 89, 1493
BccI	CCATC	7 cut(s)	245, 512, 727, 1214, 1549, 1558, 1565
BceAI	ACGGC	5 cut(s)	127, 498, 537, 1090, 1182
BclI	TGATCA	2 cut(s)	931, 999
BcnI	CCSGG	3 cut(s)	18, 41, 303
BcoDI	GTCTC	1 cut(s)	1520
BfaI	CTAG	4 cut(s)	908, 1017, 1034, 1100
BfmI	CTRYAG	2 cut(s)	624, 1368
BfuAI	ACCTGC	1 cut(s)	139
BisI	GCNGC	8 cut(s)	75, 78, 130, 412, 648, 1386, 1410, 1482
BlnI	CCTAGG	1 cut(s)	1099
BlsI	GCNGC	8 cut(s)	76, 79, 131, 413, 649, 1387, 1411, 1483
BmcAI	AGTACT	3 cut(s)	1582, 1591, 1612
Bme1390I	CCNGG	3 cut(s)	18, 41, 303
Bme18I	GGWCC	2 cut(s)	223, 326
BmeT110I	CYCGRG	1 cut(s)	802
BmgT120I	GGNCC	5 cut(s)	140, 223, 326, 629, 645
BmiI	GGNNCC	6 cut(s)	45, 475, 646, 812, 985, 1105
BmrFI	CCNGG	3 cut(s)	18, 41, 303
BmrI	ACTGGG	2 cut(s)	550, 882
BmsI	GCATC	2 cut(s)	111, 693
BmuI	ACTGGG	2 cut(s)	550, 882
BpiI	GAAGAC	2 cut(s)	547, 921
BpmI	CTGGAG	2 cut(s)	209, 259
Bpu10I	CCTNAGC	2 cut(s)	393, 1079
BpuEI	CTTGAG	1 cut(s)	973
BpuMI	CCSGG	3 cut(s)	18, 41, 303
Bsa29I	ATCGAT	1 cut(s)	749
BsaAI	YACGTR	1 cut(s)	550
BsaJI	CCNNGG	5 cut(s)	143, 204, 460, 803, 1099
BsaWI	WCCGGW	4 cut(s)	24, 328, 581, 1023
BsaXI	ACNNNNNCTCC	2 cut(s)	14, 44
Bsc4I	CCNNNNNNNGG	2 cut(s)	39, 807
Bse118I	RCCGGY	3 cut(s)	569, 581, 680
Bse1I	ACTGG	3 cut(s)	545, 888, 1206
Bse3DI	GCAATG	2 cut(s)	738, 858
BseCI	ATCGAT	1 cut(s)	749
BseDI	CCNNGG	5 cut(s)	143, 204, 460, 803, 1099
BseGI	GGATG	3 cut(s)	256, 1569, 1576
BseLI	CCNNNNNNNGG	2 cut(s)	39, 807
BseMI	GCAATG	2 cut(s)	738, 858
BseMII	CTCAG	3 cut(s)	407, 1070, 1074
BseNI	ACTGG	3 cut(s)	545, 888, 1206
BseSI	GKGCMC	1 cut(s)	46
BseXI	GCAGC	3 cut(s)	86, 89, 1493
BseYI	CCCAGC	2 cut(s)	233, 1559
BsgI	GTGCAG	1 cut(s)	1588
Bsh1236I	CGCG	3 cut(s)	221, 278, 729
BshFI	GGCC	7 cut(s)	142, 398, 630, 647, 839, 1077, 1205
BshNI	GGYRCC	3 cut(s)	43, 810, 1103
BshTI	ACCGGT	1 cut(s)	581
BshVI	ATCGAT	1 cut(s)	749
BsiHKAI	GWGCWC	3 cut(s)	32, 959, 1061
BsiHKCI	CYCGRG	1 cut(s)	802
BslFI	GGGAC	3 cut(s)	784, 1225, 1339
BslI	CCNNNNNNNGG	2 cut(s)	39, 807
BsmAI	GTCTC	1 cut(s)	1520
BsmBI	CGTCTC	1 cut(s)	1520
BsmFI	GGGAC	3 cut(s)	784, 1225, 1339
BsmI	GAATGC	2 cut(s)	524, 1387
BsnI	GGCC	7 cut(s)	142, 398, 630, 647, 839, 1077, 1205
BsoBI	CYCGRG	1 cut(s)	802
Bsp1286I	GDGCHC	8 cut(s)	32, 46, 187, 297, 308, 597, 959, 1061
Bsp143I	GATC	6 cut(s)	13, 34, 213, 750, 931, 999
Bsp19I	CCATGG	1 cut(s)	204
BspANI	GGCC	7 cut(s)	142, 398, 630, 647, 839, 1077, 1205
BspCNI	CTCAG	3 cut(s)	406, 1071, 1073
BspDI	ATCGAT	1 cut(s)	749
BspFNI	CGCG	3 cut(s)	221, 278, 729
BspHI	TCATGA	1 cut(s)	210
BspLI	GGNNCC	6 cut(s)	45, 475, 646, 812, 985, 1105
BspMI	ACCTGC	1 cut(s)	139
BspPI	GGATC	2 cut(s)	8, 745
BspQI	GCTCTTC	1 cut(s)	1253
BspT107I	GGYRCC	3 cut(s)	43, 810, 1103
BsrDI	GCAATG	2 cut(s)	738, 858
BsrFI	RCCGGY	3 cut(s)	569, 581, 680
BsrI	ACTGG	3 cut(s)	545, 888, 1206
BssAI	RCCGGY	3 cut(s)	569, 581, 680
BssECI	CCNNGG	5 cut(s)	143, 204, 460, 803, 1099
BssMI	GATC	6 cut(s)	13, 34, 213, 750, 931, 999
BssSI	CACGAG	2 cut(s)	307, 1054
BssT1I	CCWWGG	3 cut(s)	204, 460, 1099
Bst2BI	CACGAG	2 cut(s)	307, 1054
Bst4CI	ACNGT	5 cut(s)	227, 343, 1372, 1600, 1615
Bst6I	CTCTTC	3 cut(s)	363, 770, 1253
BstAPI	GCANNNNNTGC	2 cut(s)	163, 695
BstBAI	YACGTR	1 cut(s)	550
BstC8I	GCNNGC	3 cut(s)	700, 855, 1152
BstDEI	CTNAG	4 cut(s)	393, 1060, 1079, 1586
BstDSI	CCRYGG	2 cut(s)	143, 204
BstEII	GGTNACC	1 cut(s)	20
BstF5I	GGATG	3 cut(s)	256, 1569, 1576
BstFNI	CGCG	3 cut(s)	221, 278, 729
BstHHI	GCGC	4 cut(s)	280, 602, 729, 1414
BstKTI	GATC	6 cut(s)	16, 37, 216, 753, 934, 1002
BstMAI	GTCTC	1 cut(s)	1520
BstMBI	GATC	6 cut(s)	13, 34, 213, 750, 931, 999
BstMWI	GCNNNNNNNGC	9 cut(s)	154, 163, 191, 585, 695, 704, 1406, 1430, 1478
BstNSI	RCATGY	1 cut(s)	115
BstPI	GGTNACC	1 cut(s)	20
BstSCI	CCNGG	3 cut(s)	16, 39, 301
BstSFI	CTRYAG	2 cut(s)	624, 1368
BstSLI	GKGCMC	1 cut(s)	46
BstSNI	TACGTA	1 cut(s)	550
BstUI	CGCG	3 cut(s)	221, 278, 729
BstV1I	GCAGC	3 cut(s)	86, 89, 1493
BstV2I	GAAGAC	2 cut(s)	547, 921
BstXI	CCANNNNNNTGG	1 cut(s)	540
Bsu15I	ATCGAT	1 cut(s)	749
BsuRI	GGCC	7 cut(s)	142, 398, 630, 647, 839, 1077, 1205
BsuTUI	ATCGAT	1 cut(s)	749
BtgI	CCRYGG	2 cut(s)	143, 204
BtgZI	GCGATG	1 cut(s)	670
BtsCI	GGATG	3 cut(s)	256, 1569, 1576
BtsI	GCAGTG	1 cut(s)	1270
BtsIMutI	CAGTG	4 cut(s)	895, 927, 1199, 1270
BveI	ACCTGC	1 cut(s)	139
Cac8I	GCNNGC	3 cut(s)	700, 855, 1152
CciI	TCATGA	1 cut(s)	210
CfoI	GCGC	4 cut(s)	280, 602, 729, 1414
Cfr10I	RCCGGY	3 cut(s)	569, 581, 680
Cfr13I	GGNCC	5 cut(s)	140, 223, 326, 629, 645
ClaI	ATCGAT	1 cut(s)	749
CpoI	CGGWCCG	1 cut(s)	223
CseI	GACGC	2 cut(s)	274, 1222
Csp6I	GTAC	8 cut(s)	811, 818, 1069, 1124, 1186, 1581, 1590, 1611
CspAI	ACCGGT	1 cut(s)	581
CspI	CGGWCCG	1 cut(s)	223
CviAII	CATG	8 cut(s)	9, 112, 205, 211, 723, 850, 941, 976
CviQI	GTAC	8 cut(s)	811, 818, 1069, 1124, 1186, 1581, 1590, 1611
DdeI	CTNAG	4 cut(s)	393, 1060, 1079, 1586
DpnI	GATC	6 cut(s)	15, 36, 215, 752, 933, 1001
DpnII	GATC	6 cut(s)	13, 34, 213, 750, 931, 999
DraIII	CACNNNGTG	1 cut(s)	163
EaeI	YGGCCR	1 cut(s)	1203
Eam1104I	CTCTTC	3 cut(s)	363, 770, 1253
EarI	CTCTTC	3 cut(s)	363, 770, 1253
EciI	GGCGGA	1 cut(s)	362
Ecl136II	GAGCTC	2 cut(s)	30, 957
Eco105I	TACGTA	1 cut(s)	550
Eco130I	CCWWGG	3 cut(s)	204, 460, 1099
Eco147I	AGGCCT	1 cut(s)	398
Eco24I	GRGCYC	6 cut(s)	32, 187, 297, 308, 597, 959
Eco47I	GGWCC	2 cut(s)	223, 326
Eco53kI	GAGCTC	2 cut(s)	30, 957
Eco57I	CTGAAG	1 cut(s)	559
Eco88I	CYCGRG	1 cut(s)	802
Eco91I	GGTNACC	1 cut(s)	20
EcoICRI	GAGCTC	2 cut(s)	30, 957
EcoO109I	RGGNCCY	1 cut(s)	629
EcoO65I	GGTNACC	1 cut(s)	20
EcoT14I	CCWWGG	3 cut(s)	204, 460, 1099
EcoT22I	ATGCAT	1 cut(s)	104
EcoT38I	GRGCYC	6 cut(s)	32, 187, 297, 308, 597, 959
ErhI	CCWWGG	3 cut(s)	204, 460, 1099
Esp3I	CGTCTC	1 cut(s)	1520
FaeI	CATG	8 cut(s)	12, 115, 208, 214, 726, 853, 944, 979
FaqI	GGGAC	3 cut(s)	784, 1225, 1339
FatI	CATG	8 cut(s)	8, 111, 204, 210, 722, 849, 940, 975
FauI	CCCGC	2 cut(s)	421, 1315
FbaI	TGATCA	2 cut(s)	931, 999
Fnu4HI	GCNGC	8 cut(s)	75, 78, 130, 412, 648, 1386, 1410, 1482
FokI	GGATG	3 cut(s)	263, 1576, 1583
FriOI	GRGCYC	6 cut(s)	32, 187, 297, 308, 597, 959
Fsp4HI	GCNGC	8 cut(s)	75, 78, 130, 412, 648, 1386, 1410, 1482
FspBI	CTAG	4 cut(s)	908, 1017, 1034, 1100
GlaI	GCGC	4 cut(s)	279, 601, 728, 1413
GluI	GCNGC	8 cut(s)	75, 78, 130, 412, 648, 1386, 1410, 1482
GsaI	CCCAGC	2 cut(s)	237, 1563
GsuI	CTGGAG	2 cut(s)	209, 259
HaeIII	GGCC	7 cut(s)	142, 398, 630, 647, 839, 1077, 1205
HgaI	GACGC	2 cut(s)	274, 1222
HhaI	GCGC	4 cut(s)	280, 602, 729, 1414
Hin1II	CATG	8 cut(s)	12, 115, 208, 214, 726, 853, 944, 979
Hin6I	GCGC	4 cut(s)	278, 600, 727, 1412
HinP1I	GCGC	4 cut(s)	278, 600, 727, 1412
HincII	GTYRAC	1 cut(s)	1096
HindII	GTYRAC	1 cut(s)	1096
HinfI	GANTC	6 cut(s)	269, 452, 797, 894, 1020, 1426
HphI	GGTGA	5 cut(s)	32, 343, 559, 926, 999
Hpy166II	GTNNAC	4 cut(s)	230, 660, 1069, 1096
Hpy188I	TCNGA	3 cut(s)	34, 451, 796
Hpy188III	TCNNGA	4 cut(s)	188, 211, 248, 1210
Hpy8I	GTNNAC	4 cut(s)	230, 660, 1069, 1096
Hpy99I	CGWCG	2 cut(s)	110, 776
HpyAV	CCTTC	4 cut(s)	769, 791, 796, 1185
HpyCH4III	ACNGT	5 cut(s)	227, 343, 1372, 1600, 1615
HpyCH4IV	ACGT	3 cut(s)	549, 1089, 1529
HpyCH4V	TGCA	8 cut(s)	102, 698, 1142, 1400, 1433, 1496, 1511, 1605
HpyF10VI	GCNNNNNNNGC	9 cut(s)	154, 163, 191, 585, 695, 704, 1406, 1430, 1478
HpyF3I	CTNAG	4 cut(s)	393, 1060, 1079, 1586
HpySE526I	ACGT	3 cut(s)	549, 1089, 1529
Hsp92II	CATG	8 cut(s)	12, 115, 208, 214, 726, 853, 944, 979
HspAI	GCGC	4 cut(s)	278, 600, 727, 1412
KpnI	GGTACC	1 cut(s)	814
Ksp22I	TGATCA	2 cut(s)	931, 999
Kzo9I	GATC	6 cut(s)	13, 34, 213, 750, 931, 999
LguI	GCTCTTC	1 cut(s)	1253
LmnI	GCTCC	6 cut(s)	27, 35, 120, 479, 962, 1248
Lsp1109I	GCAGC	3 cut(s)	86, 89, 1493
LweI	GCATC	2 cut(s)	111, 693
MaeI	CTAG	4 cut(s)	908, 1017, 1034, 1100
MaeII	ACGT	3 cut(s)	549, 1089, 1529
MaeIII	GTNAC	2 cut(s)	20, 1005
MalI	GATC	6 cut(s)	15, 36, 215, 752, 933, 1001
MboI	GATC	6 cut(s)	13, 34, 213, 750, 931, 999
MboII	GAAGA	9 cut(s)	208, 380, 397, 477, 547, 664, 757, 926, 1270
MhlI	GDGCHC	8 cut(s)	32, 46, 187, 297, 308, 597, 959, 1061
MlsI	TGGCCA	1 cut(s)	1205
MluCI	AATT	2 cut(s)	1230, 1333
MluNI	TGGCCA	1 cut(s)	1205
MlyI	GAGTC	3 cut(s)	446, 806, 903
Mox20I	TGGCCA	1 cut(s)	1205
Mph1103I	ATGCAT	1 cut(s)	104
MscI	TGGCCA	1 cut(s)	1205
MseI	TTAA	4 cut(s)	479, 497, 518, 831
MslI	CAYNNNNRTG	3 cut(s)	209, 939, 995
Msp20I	TGGCCA	1 cut(s)	1205
MspA1I	CMGCKG	1 cut(s)	237
MspR9I	CCNGG	3 cut(s)	18, 41, 303
Mva1269I	GAATGC	2 cut(s)	524, 1387
MvnI	CGCG	3 cut(s)	221, 278, 729
MwoI	GCNNNNNNNGC	9 cut(s)	154, 163, 191, 585, 695, 704, 1406, 1430, 1478
NciI	CCSGG	3 cut(s)	18, 41, 303
NcoI	CCATGG	1 cut(s)	204
NdeII	GATC	6 cut(s)	13, 34, 213, 750, 931, 999
NlaIII	CATG	8 cut(s)	12, 115, 208, 214, 726, 853, 944, 979
NlaIV	GGNNCC	6 cut(s)	45, 475, 646, 812, 985, 1105
NmeAIII	GCCGAG	1 cut(s)	306
NmuCI	GTSAC	2 cut(s)	20, 1005
NsiI	ATGCAT	1 cut(s)	104
NspI	RCATGY	1 cut(s)	115
PagI	TCATGA	1 cut(s)	210
PceI	AGGCCT	1 cut(s)	398
PciSI	GCTCTTC	1 cut(s)	1253
PcsI	WCGNNNNNNNCGW	2 cut(s)	282, 800
PctI	GAATGC	2 cut(s)	524, 1387
PfeI	GAWTC	3 cut(s)	269, 1020, 1426
PinAI	ACCGGT	1 cut(s)	581
PkrI	GCNGC	8 cut(s)	76, 79, 131, 413, 649, 1387, 1411, 1483
PleI	GAGTC	3 cut(s)	446, 805, 902
PpsI	GAGTC	3 cut(s)	446, 805, 902
Ppu21I	YACGTR	1 cut(s)	550
Psp124BI	GAGCTC	2 cut(s)	32, 959
Psp1406I	AACGTT	1 cut(s)	1089
PspEI	GGTNACC	1 cut(s)	20
PspFI	CCCAGC	2 cut(s)	233, 1559
PspN4I	GGNNCC	6 cut(s)	45, 475, 646, 812, 985, 1105
PspPI	GGNCC	5 cut(s)	140, 223, 326, 629, 645
PvuII	CAGCTG	1 cut(s)	237
RsaI	GTAC	8 cut(s)	812, 819, 1070, 1125, 1187, 1582, 1591, 1612
RsaNI	GTAC	8 cut(s)	811, 818, 1069, 1124, 1186, 1581, 1590, 1611
RseI	CAYNNNNRTG	3 cut(s)	209, 939, 995
Rsr2I	CGGWCCG	1 cut(s)	223
RsrII	CGGWCCG	1 cut(s)	223
SacI	GAGCTC	2 cut(s)	32, 959
SapI	GCTCTTC	1 cut(s)	1253
SaqAI	TTAA	4 cut(s)	479, 497, 518, 831
SatI	GCNGC	8 cut(s)	75, 78, 130, 412, 648, 1386, 1410, 1482
Sau3AI	GATC	6 cut(s)	13, 34, 213, 750, 931, 999
Sau96I	GGNCC	5 cut(s)	140, 223, 326, 629, 645
ScaI	AGTACT	3 cut(s)	1582, 1591, 1612
SchI	GAGTC	3 cut(s)	446, 806, 903
ScrFI	CCNGG	3 cut(s)	18, 41, 303
SduI	GDGCHC	8 cut(s)	32, 46, 187, 297, 308, 597, 959, 1061
SfaNI	GCATC	2 cut(s)	111, 693
SfcI	CTRYAG	2 cut(s)	624, 1368
SgrAI	CRCCGGYG	1 cut(s)	581
SinI	GGWCC	2 cut(s)	223, 326
SmiMI	CAYNNNNRTG	3 cut(s)	209, 939, 995
SmlI	CTYRAG	1 cut(s)	952
SmoI	CTYRAG	1 cut(s)	952
SnaBI	TACGTA	1 cut(s)	550
Sse9I	AATT	2 cut(s)	1230, 1333
SseBI	AGGCCT	1 cut(s)	398
SspMI	CTAG	4 cut(s)	908, 1017, 1034, 1100
SstI	GAGCTC	2 cut(s)	32, 959
StuI	AGGCCT	1 cut(s)	398
StyD4I	CCNGG	3 cut(s)	16, 39, 301
StyI	CCWWGG	3 cut(s)	204, 460, 1099
TaaI	ACNGT	5 cut(s)	227, 343, 1372, 1600, 1615
TaiI	ACGT	3 cut(s)	552, 1092, 1532
TaqI	TCGA	3 cut(s)	105, 749, 1179
TasI	AATT	2 cut(s)	1230, 1333
TatI	WGTACW	5 cut(s)	1068, 1123, 1580, 1589, 1610
TauI	GCSGC	5 cut(s)	132, 414, 650, 1388, 1412
TfiI	GAWTC	3 cut(s)	269, 1020, 1426
Tru1I	TTAA	4 cut(s)	479, 497, 518, 831
Tru9I	TTAA	4 cut(s)	479, 497, 518, 831
TscAI	CASTG	4 cut(s)	895, 934, 1206, 1270
TseFI	GTSAC	2 cut(s)	20, 1005
TseI	GCWGC	3 cut(s)	74, 77, 1481
Tsp45I	GTSAC	2 cut(s)	20, 1005
TspDTI	ATGAA	2 cut(s)	957, 1271
TspGWI	ACGGA	2 cut(s)	548, 1203
TspRI	CASTG	4 cut(s)	895, 934, 1206, 1270
VpaK11BI	GGWCC	2 cut(s)	223, 326
XapI	RAATTY	1 cut(s)	1230
XceI	RCATGY	1 cut(s)	115
XcmI	CCANNNNNNNNNTGG	1 cut(s)	887
XmaJI	CCTAGG	1 cut(s)	1099
XspI	CTAG	4 cut(s)	908, 1017, 1034, 1100
ZrmI	AGTACT	3 cut(s)	1582, 1591, 1612
Zsp2I	ATGCAT	1 cut(s)	104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.