Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0012192

Physical Location & Seq

Genomic Coordinates Forward (+)

17521026 .. 17527366

Gene Structure 6341 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g16350.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGATAAATGGGGTAATGCCAAGGAAAGAGATCCTAACAGCATTCCCTAATCTTAAACGCCACCACGACCACCTCTTATACAAGAAATTAATTAGGTCAATTCATAACATGCCCACCCGTTCATCATCATCGTCATCTGACTCGGGAGGCGATCAGAGCCCCGAGCTCCGGTCACCTCTGCTCTCCAATGCAAATAAACCCGCCGGAGAGCCTGAATCAGAGAAACTATGCATCGACGACATGTTACAAAAGTATTGCGGGGAGTTTGGTCCGTACCAAATGAAGCACTTCGTGCTGACCAGCTTGGCTTGGGCTCTGGAGGCCTTCCACACCATGGTCATGATATTTGCGGACCGTGAACCGGCTTGGCGGTGTTTGGATGGAGCAGCTGGTTCGGGTTGCGATGCCGGGGCAAGGACCGTTTGCGGGCTCGAATCGGGTTCATGGGAGTGGATCGGCGATCTTGGAAACTCGACCGTTGCTGAATGGGGGTTGGTTTGTGAGGAGAAGTATAAGGTTGGGCTGGCTCAGGCCTTGTTCTTCGGCGGCTGTATGATTGGTCAGTCAAGTGCGGGAATCTTTGGGCATTTGTCAGACTCGTTTTTAGGAAGAAAGGGCTCCCTAACCGTTGTTTGCATTGTGAATACGATCTTCGGCTGCCTAACAGCATTCTCCCCAAACTACTGGACCTACGTCCTCTTCCGCCTCCTCACCGGCTTCAGCACAGGTGGGGTTGGTCTATGTGCCTTCGTCCTTGCCACAGAACCTGTCGGTCCTACAAAGCGTGGTGCAGCAGGAATGTCCACATTCTACTTCTTCTCAACAGGAATTGCAATCCTCTCTTGTGTTGCGTACATTTTCCCACAATGGCGCGAGCTCTACATTGTCTCCTCAATCCCGTCATTGCTCTTCTTGCTCGTTGTCCTACCATTTGTCTCTGAGTCCCCAAGGTGGTACCTCATACGAGGAAGAATATCTGAAGCCATGAAACTAATGCGCGTAATTGCAAAGTCCAACAAGAACTACCTTCCTGAGGGAGTTGTCCTAACCCTAGACGAAGAAGCAAGCAATGATAATAGTACTACTATTACAAACGAGGATGACCAAACGTTCAAGGAACTATTGGAGAGAAAAGAAGCAATAAGTGGTTCTCTAATTGATGTGATGAAGTCTCCAGTTACTAGAATTCGGTTATTCCTAGCTGTGACCATAAATTTCTTGTGCTCGGTCGTGTACTATGGTTTGAGTTTGAACGTTGTCAACCTCGAAACCAACCTCTACATCAACGTGCTACTCAATGCCGTGGCGGAAATGCCAGCTTTCACAATCACAGCAATATTACTGGACAAGTATGGAAGGAAGCCACTGGCAATTGGGACACTATGGTTTAGTGGGGTTTTTTGTTTTCTTGGGATCTTGGTGGGGAATGTTGGGGTGTGGAAAGTTGTTAGGATGGTGTGCGGGATTTTGGGGATTTTTGGGATGGCGGGGACTTACAATTTGCTTTTTATTTACACCACGGAGTTGTTTCCGACTGTGGTGAGGAATGCAGCGCTTGGATGTGCCACACAAGCCGCACAAATGGGGGCGATTTTGGCTCCGTTTGTGGTGGTTTTGGGCGGGGGTTTGCCGTTTGCAGTGTTTGCCATGTGTGGGATTGTGGGTGGGATGTTTGCATTTTATTTGCCGGAGACGTTGAATAAGCCTTTGTATGATACATTGACTGGGATGGAGGATGGGGAGGGTGCTTTCAGAAGTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0007154 GO:0008150 GO:0008509 GO:0008514 GO:0009414 GO:0009415 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009605 GO:0009628 GO:0009705 GO:0009987 GO:0009991 GO:0010035 GO:0015075 GO:0015711 GO:0016020 GO:0016021 GO:0022857 GO:0031090 GO:0031224 GO:0031668 GO:0031976 GO:0031984 GO:0033554 GO:0034220 GO:0034357 GO:0042221 GO:0042631 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055035 GO:0055085 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071702 GO:0098588 GO:0098656 GO:0098805 GO:0104004 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko05231 map05231

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

588

Amino Acids

64.01

Weight (kDa)

6.22

Isoelectric Point (pI)

38.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012192)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73220 AT3G20660
fragaria_vesca	FvH4_6g28280
malus_domestica	MD03G1215000.v1.1 MD11G1229700.v1.1
prunus_persica	Prupe.4G197800_v2.0.a1
pyrus_communis	pycom03g16350 pycom11g20340
rosa_chinensis	RchiOBHm_Chr2g0132341
rosa_laevigata	RLG00000019247
rosa_multiflora	Rmu_sc0000781.1_g000003 Rmu_sc0002795.1_g000003
rosa_roxburghii	Rroxscaffold_2G00112150
rosa_rugosa	Rorug02G0303700
rosa_samantha	Rh2AG356800 Rh2BG363300 Rh2CG340400 Rh2DG380100
rosa_wichuraiana	Rw2G029010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	954
AccB1I	GGYRCC	1 cut(s)	954
AccB7I	CCANNNNNTGG	1 cut(s)	334
AccII	CGCG	2 cut(s)	873, 999
AclI	AACGTT	2 cut(s)	1109, 1254
AclWI	GGATC	3 cut(s)	25, 461, 1421
AcsI	RAATTY	2 cut(s)	1185, 1213
AcuI	CTGAAG	2 cut(s)	703, 999
AdeI	CACNNNGTG	1 cut(s)	292
AfaI	GTAC	5 cut(s)	275, 854, 956, 1081, 1235
AfeI	AGCGCT	1 cut(s)	1554
AfiI	CCNNNNNNNGG	8 cut(s)	168, 334, 361, 414, 426, 951, 1033, 1653
AflIII	ACRYGT	1 cut(s)	240
AgsI	TTSAA	3 cut(s)	1114, 1252, 1699
AluBI	AGCT	6 cut(s)	166, 303, 389, 877, 1202, 1319
AluI	AGCT	6 cut(s)	166, 303, 389, 877, 1202, 1319
Alw21I	GWGCWC	3 cut(s)	168, 879, 1226
Alw26I	GTCTC	4 cut(s)	892, 940, 1176, 1685
AlwI	GGATC	3 cut(s)	25, 461, 1421
AlwNI	CAGNNNCTG	1 cut(s)	767
Ama87I	CYCGRG	2 cut(s)	142, 161
Aor51HI	AGCGCT	1 cut(s)	1554
AoxI	GGCC	2 cut(s)	321, 531
ApeKI	GCWGC	4 cut(s)	386, 657, 791, 1550
ApoI	RAATTY	2 cut(s)	1185, 1213
ArsI	GACNNNNNNTTYG	2 cut(s)	1483, 1515
AseI	ATTAAT	1 cut(s)	89
Asp700I	GAANNNNTTC	1 cut(s)	287
Asp718I	GGTACC	1 cut(s)	954
AspLEI	GCGC	3 cut(s)	873, 999, 1555
AspS9I	GGNCC	5 cut(s)	269, 352, 417, 687, 773
AsuC2I	CCSGG	1 cut(s)	409
AsuHPI	GGTGA	3 cut(s)	165, 703, 1552
AvaI	CYCGRG	2 cut(s)	142, 161
AvaII	GGWCC	5 cut(s)	269, 352, 417, 687, 773
AxyI	CCTNAGG	1 cut(s)	1032
BanI	GGYRCC	1 cut(s)	954
BanII	GRGCYC	6 cut(s)	161, 168, 316, 432, 620, 879
Bbv12I	GWGCWC	3 cut(s)	168, 879, 1226
BbvI	GCAGC	4 cut(s)	398, 644, 803, 1562
BccI	CCATC	5 cut(s)	374, 1447, 1477, 1723, 1730
BceAI	ACGGC	2 cut(s)	1286, 1615
BcgI	CGANNNNNNTGC	2 cut(s)	375, 409
BcnI	CCSGG	1 cut(s)	409
BcoDI	GTCTC	4 cut(s)	892, 940, 1176, 1685
BfaI	CTAG	3 cut(s)	1052, 1182, 1199
BfoI	RGCGCY	1 cut(s)	1556
BisI	GCNGC	6 cut(s)	387, 547, 658, 792, 1551, 1575
BlsI	GCNGC	6 cut(s)	388, 548, 659, 793, 1552, 1576
BmcAI	AGTACT	1 cut(s)	1081
Bme1390I	CCNGG	1 cut(s)	409
Bme18I	GGWCC	5 cut(s)	269, 352, 417, 687, 773
BmeT110I	CYCGRG	2 cut(s)	142, 161
BmgT120I	GGNCC	5 cut(s)	269, 352, 417, 687, 773
BmiI	GGNNCC	3 cut(s)	619, 956, 1599
BmrFI	CCNGG	1 cut(s)	409
BmrI	ACTGGG	1 cut(s)	1734
BmsI	GCATC	2 cut(s)	240, 394
BmuI	ACTGGG	1 cut(s)	1734
BoxI	GACNNNNGTC	1 cut(s)	692
BpmI	CTGGAG	2 cut(s)	338, 1158
Bpu10I	CCTNAGC	1 cut(s)	528
BpuMI	CCSGG	1 cut(s)	409
BsaJI	CCNNGG	6 cut(s)	20, 333, 408, 947, 1302, 1518
BsaWI	WCCGGW	1 cut(s)	168
BsaXI	ACNNNNNCTCC	2 cut(s)	872, 902
Bsc4I	CCNNNNNNNGG	8 cut(s)	168, 334, 361, 414, 426, 951, 1033, 1653
Bse118I	RCCGGY	2 cut(s)	361, 713
Bse1I	ACTGG	5 cut(s)	689, 1175, 1347, 1371, 1729
Bse21I	CCTNAGG	1 cut(s)	1032
Bse3DI	GCAATG	2 cut(s)	902, 1075
BseDI	CCNNGG	6 cut(s)	20, 333, 408, 947, 1302, 1518
BseGI	GGATG	8 cut(s)	385, 1105, 1458, 1488, 1565, 1674, 1734, 1741
BseLI	CCNNNNNNNGG	8 cut(s)	168, 334, 361, 414, 426, 951, 1033, 1653
BseMI	GCAATG	2 cut(s)	902, 1075
BseMII	CTCAG	3 cut(s)	542, 930, 1023
BseNI	ACTGG	5 cut(s)	689, 1175, 1347, 1371, 1729
BseRI	GAGGAG	3 cut(s)	518, 698, 880
BseXI	GCAGC	4 cut(s)	398, 644, 803, 1562
BsgI	GTGCAG	1 cut(s)	810
Bsh1236I	CGCG	2 cut(s)	873, 999
Bsh1285I	CGRYCG	2 cut(s)	477, 1230
BshFI	GGCC	2 cut(s)	323, 533
BshNI	GGYRCC	1 cut(s)	954
BsiEI	CGRYCG	2 cut(s)	477, 1230
BsiHKAI	GWGCWC	3 cut(s)	168, 879, 1226
BsiHKCI	CYCGRG	2 cut(s)	142, 161
BsiSI	CCGG	6 cut(s)	169, 204, 362, 408, 714, 1688
BslFI	GGGAC	3 cut(s)	928, 1390, 1504
BslI	CCNNNNNNNGG	8 cut(s)	168, 334, 361, 414, 426, 951, 1033, 1653
BsmAI	GTCTC	4 cut(s)	892, 940, 1176, 1685
BsmBI	CGTCTC	1 cut(s)	1685
BsmFI	GGGAC	3 cut(s)	928, 1390, 1504
BsmI	GAATGC	3 cut(s)	41, 668, 1552
BsnI	GGCC	2 cut(s)	323, 533
BsoBI	CYCGRG	2 cut(s)	142, 161
Bsp1286I	GDGCHC	7 cut(s)	161, 168, 316, 432, 620, 879, 1226
Bsp143I	GATC	6 cut(s)	30, 151, 453, 460, 648, 1413
Bsp19I	CCATGG	1 cut(s)	333
BspANI	GGCC	2 cut(s)	323, 533
BspCNI	CTCAG	3 cut(s)	541, 931, 1024
BspFNI	CGCG	2 cut(s)	873, 999
BspHI	TCATGA	1 cut(s)	339
BspLI	GGNNCC	3 cut(s)	619, 956, 1599
BspPI	GGATC	3 cut(s)	25, 461, 1421
BspQI	GCTCTTC	1 cut(s)	914
BspT107I	GGYRCC	1 cut(s)	954
BsrDI	GCAATG	2 cut(s)	902, 1075
BsrFI	RCCGGY	2 cut(s)	361, 713
BsrI	ACTGG	5 cut(s)	689, 1175, 1347, 1371, 1729
BssAI	RCCGGY	2 cut(s)	361, 713
BssECI	CCNNGG	6 cut(s)	20, 333, 408, 947, 1302, 1518
BssMI	GATC	6 cut(s)	30, 151, 453, 460, 648, 1413
BssT1I	CCWWGG	3 cut(s)	20, 333, 947
Bst4CI	ACNGT	5 cut(s)	356, 421, 478, 628, 1537
Bst6I	CTCTTC	2 cut(s)	704, 914
BstAPI	GCANNNNNTGC	2 cut(s)	292, 1643
BstC8I	GCNNGC	5 cut(s)	428, 525, 875, 1066, 1317
BstDEI	CTNAG	3 cut(s)	528, 939, 1032
BstDSI	CCRYGG	3 cut(s)	333, 1302, 1518
BstEII	GGTNACC	1 cut(s)	171
BstENI	CCTNNNNNAGG	1 cut(s)	1031
BstF5I	GGATG	8 cut(s)	385, 1105, 1458, 1488, 1565, 1674, 1734, 1741
BstFNI	CGCG	2 cut(s)	873, 999
BstH2I	RGCGCY	1 cut(s)	1556
BstHHI	GCGC	3 cut(s)	873, 999, 1555
BstKTI	GATC	6 cut(s)	33, 154, 456, 463, 651, 1416
BstMAI	GTCTC	4 cut(s)	892, 940, 1176, 1685
BstMBI	GATC	6 cut(s)	30, 151, 453, 460, 648, 1413
BstMCI	CGRYCG	2 cut(s)	477, 1230
BstMWI	GCNNNNNNNGC	7 cut(s)	156, 292, 320, 913, 1571, 1595, 1643
BstNSI	RCATGY	2 cut(s)	112, 244
BstPAI	GACNNNNGTC	1 cut(s)	692
BstPI	GGTNACC	1 cut(s)	171
BstSCI	CCNGG	1 cut(s)	407
BstUI	CGCG	2 cut(s)	873, 999
BstV1I	GCAGC	4 cut(s)	398, 644, 803, 1562
BstX2I	RGATCY	2 cut(s)	30, 1413
BstXI	CCANNNNNNTGG	1 cut(s)	684
BstYI	RGATCY	2 cut(s)	30, 1413
Bsu36I	CCTNAGG	1 cut(s)	1032
BsuRI	GGCC	2 cut(s)	323, 533
BtgI	CCRYGG	3 cut(s)	333, 1302, 1518
BtgZI	GCGATG	1 cut(s)	417
BtsCI	GGATG	8 cut(s)	385, 1105, 1458, 1488, 1565, 1674, 1734, 1741
BtsI	GCAGTG	1 cut(s)	1644
BtsIMutI	CAGTG	2 cut(s)	1364, 1644
Cac8I	GCNNGC	5 cut(s)	428, 525, 875, 1066, 1317
CaiI	CAGNNNCTG	1 cut(s)	767
CciI	TCATGA	1 cut(s)	339
CfoI	GCGC	3 cut(s)	873, 999, 1555
Cfr10I	RCCGGY	2 cut(s)	361, 713
Cfr13I	GGNCC	5 cut(s)	269, 352, 417, 687, 773
CpoI	CGGWCCG	1 cut(s)	352
Csp6I	GTAC	5 cut(s)	274, 853, 955, 1080, 1234
CspI	CGGWCCG	1 cut(s)	352
CviAII	CATG	7 cut(s)	109, 241, 334, 340, 444, 985, 1648
CviQI	GTAC	5 cut(s)	274, 853, 955, 1080, 1234
DdeI	CTNAG	3 cut(s)	528, 939, 1032
DpnI	GATC	6 cut(s)	32, 153, 455, 462, 650, 1415
DpnII	GATC	6 cut(s)	30, 151, 453, 460, 648, 1413
DraIII	CACNNNGTG	1 cut(s)	292
Eam1104I	CTCTTC	2 cut(s)	704, 914
EarI	CTCTTC	2 cut(s)	704, 914
EciI	GGCGGA	2 cut(s)	692, 1322
Ecl136II	GAGCTC	2 cut(s)	166, 877
Eco130I	CCWWGG	3 cut(s)	20, 333, 947
Eco147I	AGGCCT	2 cut(s)	323, 533
Eco24I	GRGCYC	6 cut(s)	161, 168, 316, 432, 620, 879
Eco47I	GGWCC	5 cut(s)	269, 352, 417, 687, 773
Eco47III	AGCGCT	1 cut(s)	1554
Eco53kI	GAGCTC	2 cut(s)	166, 877
Eco57I	CTGAAG	2 cut(s)	703, 999
Eco81I	CCTNAGG	1 cut(s)	1032
Eco88I	CYCGRG	2 cut(s)	142, 161
Eco91I	GGTNACC	1 cut(s)	171
EcoICRI	GAGCTC	2 cut(s)	166, 877
EcoNI	CCTNNNNNAGG	1 cut(s)	1031
EcoO65I	GGTNACC	1 cut(s)	171
EcoRI	GAATTC	1 cut(s)	1185
EcoT14I	CCWWGG	3 cut(s)	20, 333, 947
EcoT22I	ATGCAT	1 cut(s)	233
EcoT38I	GRGCYC	6 cut(s)	161, 168, 316, 432, 620, 879
ErhI	CCWWGG	3 cut(s)	20, 333, 947
Esp3I	CGTCTC	1 cut(s)	1685
FaeI	CATG	7 cut(s)	112, 244, 337, 343, 447, 988, 1651
FaqI	GGGAC	3 cut(s)	928, 1390, 1504
FatI	CATG	7 cut(s)	108, 240, 333, 339, 443, 984, 1647
FauI	CCCGC	7 cut(s)	208, 251, 419, 565, 1454, 1480, 1613
Fnu4HI	GCNGC	6 cut(s)	387, 547, 658, 792, 1551, 1575
FokI	GGATG	8 cut(s)	392, 1112, 1465, 1495, 1572, 1681, 1741, 1748
FriOI	GRGCYC	6 cut(s)	161, 168, 316, 432, 620, 879
Fsp4HI	GCNGC	6 cut(s)	387, 547, 658, 792, 1551, 1575
FspBI	CTAG	3 cut(s)	1052, 1182, 1199
GlaI	GCGC	3 cut(s)	872, 998, 1554
GluI	GCNGC	6 cut(s)	387, 547, 658, 792, 1551, 1575
GsuI	CTGGAG	2 cut(s)	338, 1158
HaeII	RGCGCY	1 cut(s)	1556
HaeIII	GGCC	2 cut(s)	323, 533
HapII	CCGG	6 cut(s)	169, 204, 362, 408, 714, 1688
HhaI	GCGC	3 cut(s)	873, 999, 1555
Hin1II	CATG	7 cut(s)	112, 244, 337, 343, 447, 988, 1651
Hin6I	GCGC	3 cut(s)	871, 997, 1553
HinP1I	GCGC	3 cut(s)	871, 997, 1553
HincII	GTYRAC	1 cut(s)	1261
HindII	GTYRAC	1 cut(s)	1261
HinfI	GANTC	6 cut(s)	140, 215, 434, 576, 596, 941
HpaII	CCGG	6 cut(s)	169, 204, 362, 408, 714, 1688
HphI	GGTGA	3 cut(s)	165, 703, 1552
Hpy166II	GTNNAC	4 cut(s)	359, 804, 1234, 1261
Hpy188I	TCNGA	8 cut(s)	139, 156, 220, 595, 940, 979, 1533, 1754
Hpy188III	TCNNGA	4 cut(s)	144, 317, 340, 1031
Hpy8I	GTNNAC	4 cut(s)	359, 804, 1234, 1261
Hpy99I	CGWCG	1 cut(s)	239
HpyAV	CCTTC	4 cut(s)	334, 757, 1037, 1350
HpyCH4III	ACNGT	5 cut(s)	356, 421, 478, 628, 1537
HpyCH4IV	ACGT	5 cut(s)	693, 1109, 1254, 1287, 1694
HpyCH4V	TGCA	9 cut(s)	191, 231, 636, 791, 833, 1007, 1550, 1637, 1676
HpyF10VI	GCNNNNNNNGC	7 cut(s)	156, 292, 320, 913, 1571, 1595, 1643
HpyF3I	CTNAG	3 cut(s)	528, 939, 1032
HpySE526I	ACGT	5 cut(s)	693, 1109, 1254, 1287, 1694
Hsp92II	CATG	7 cut(s)	112, 244, 337, 343, 447, 988, 1651
HspAI	GCGC	3 cut(s)	871, 997, 1553
KpnI	GGTACC	1 cut(s)	958
Kzo9I	GATC	6 cut(s)	30, 151, 453, 460, 648, 1413
LguI	GCTCTTC	1 cut(s)	914
LmnI	GCTCC	4 cut(s)	171, 383, 623, 1603
Lsp1109I	GCAGC	4 cut(s)	398, 644, 803, 1562
LweI	GCATC	2 cut(s)	240, 394
MaeI	CTAG	3 cut(s)	1052, 1182, 1199
MaeII	ACGT	5 cut(s)	693, 1109, 1254, 1287, 1694
MaeIII	GTNAC	4 cut(s)	171, 243, 1177, 1204
MalI	GATC	6 cut(s)	32, 153, 455, 462, 650, 1415
MboI	GATC	6 cut(s)	30, 151, 453, 460, 648, 1413
MboII	GAAGA	8 cut(s)	532, 621, 643, 691, 808, 901, 981, 1070
MfeI	CAATTG	1 cut(s)	1371
MflI	RGATCY	2 cut(s)	30, 1413
MhlI	GDGCHC	7 cut(s)	161, 168, 316, 432, 620, 879, 1226
MlyI	GAGTC	3 cut(s)	134, 590, 950
MmeI	TCCRAC	2 cut(s)	1038, 1556
Mph1103I	ATGCAT	1 cut(s)	233
MroXI	GAANNNNTTC	1 cut(s)	287
MseI	TTAA	2 cut(s)	54, 89
MslI	CAYNNNNRTG	3 cut(s)	338, 448, 1286
MspA1I	CMGCKG	1 cut(s)	389
MspI	CCGG	6 cut(s)	169, 204, 362, 408, 714, 1688
MspR9I	CCNGG	1 cut(s)	409
MunI	CAATTG	1 cut(s)	1371
Mva1269I	GAATGC	3 cut(s)	41, 668, 1552
MvnI	CGCG	2 cut(s)	873, 999
MwoI	GCNNNNNNNGC	7 cut(s)	156, 292, 320, 913, 1571, 1595, 1643
NciI	CCSGG	1 cut(s)	409
NcoI	CCATGG	1 cut(s)	333
NdeII	GATC	6 cut(s)	30, 151, 453, 460, 648, 1413
NlaIII	CATG	7 cut(s)	112, 244, 337, 343, 447, 988, 1651
NlaIV	GGNNCC	3 cut(s)	619, 956, 1599
NmuCI	GTSAC	2 cut(s)	171, 1204
NsiI	ATGCAT	1 cut(s)	233
NspI	RCATGY	2 cut(s)	112, 244
PagI	TCATGA	1 cut(s)	339
PceI	AGGCCT	2 cut(s)	323, 533
PciI	ACATGT	1 cut(s)	240
PciSI	GCTCTTC	1 cut(s)	914
PctI	GAATGC	3 cut(s)	41, 668, 1552
PdmI	GAANNNNTTC	1 cut(s)	287
PfeI	GAWTC	3 cut(s)	215, 434, 576
PflMI	CCANNNNNTGG	1 cut(s)	334
PkrI	GCNGC	6 cut(s)	388, 548, 659, 793, 1552, 1576
PleI	GAGTC	3 cut(s)	134, 590, 949
PpsI	GAGTC	3 cut(s)	134, 590, 949
PscI	ACATGT	1 cut(s)	240
PshAI	GACNNNNGTC	1 cut(s)	692
PshBI	ATTAAT	1 cut(s)	89
Psp124BI	GAGCTC	2 cut(s)	168, 879
Psp1406I	AACGTT	2 cut(s)	1109, 1254
PspEI	GGTNACC	1 cut(s)	171
PspN4I	GGNNCC	3 cut(s)	619, 956, 1599
PspPI	GGNCC	5 cut(s)	269, 352, 417, 687, 773
PstNI	CAGNNNCTG	1 cut(s)	767
PsuI	RGATCY	2 cut(s)	30, 1413
PvuII	CAGCTG	1 cut(s)	389
RsaI	GTAC	5 cut(s)	275, 854, 956, 1081, 1235
RsaNI	GTAC	5 cut(s)	274, 853, 955, 1080, 1234
RseI	CAYNNNNRTG	3 cut(s)	338, 448, 1286
Rsr2I	CGGWCCG	1 cut(s)	352
RsrII	CGGWCCG	1 cut(s)	352
SacI	GAGCTC	2 cut(s)	168, 879
SapI	GCTCTTC	1 cut(s)	914
SaqAI	TTAA	2 cut(s)	54, 89
SatI	GCNGC	6 cut(s)	387, 547, 658, 792, 1551, 1575
Sau3AI	GATC	6 cut(s)	30, 151, 453, 460, 648, 1413
Sau96I	GGNCC	5 cut(s)	269, 352, 417, 687, 773
ScaI	AGTACT	1 cut(s)	1081
SchI	GAGTC	3 cut(s)	134, 590, 950
ScrFI	CCNGG	1 cut(s)	409
SduI	GDGCHC	7 cut(s)	161, 168, 316, 432, 620, 879, 1226
SfaNI	GCATC	2 cut(s)	240, 394
SinI	GGWCC	5 cut(s)	269, 352, 417, 687, 773
SmiMI	CAYNNNNRTG	3 cut(s)	338, 448, 1286
SseBI	AGGCCT	2 cut(s)	323, 533
SspI	AATATT	1 cut(s)	1338
SspMI	CTAG	3 cut(s)	1052, 1182, 1199
SstI	GAGCTC	2 cut(s)	168, 879
StuI	AGGCCT	2 cut(s)	323, 533
StyD4I	CCNGG	1 cut(s)	407
StyI	CCWWGG	3 cut(s)	20, 333, 947
TaaI	ACNGT	5 cut(s)	356, 421, 478, 628, 1537
TaiI	ACGT	5 cut(s)	696, 1112, 1257, 1290, 1697
TaqI	TCGA	4 cut(s)	234, 432, 473, 1266
TaqII	GACCGA	2 cut(s)	761, 1216
TatI	WGTACW	2 cut(s)	1079, 1233
TauI	GCSGC	2 cut(s)	549, 1577
TfiI	GAWTC	3 cut(s)	215, 434, 576
Tru1I	TTAA	2 cut(s)	54, 89
Tru9I	TTAA	2 cut(s)	54, 89
TscAI	CASTG	2 cut(s)	1371, 1644
TseFI	GTSAC	2 cut(s)	171, 1204
TseI	GCWGC	4 cut(s)	386, 657, 791, 1550
Tsp45I	GTSAC	2 cut(s)	171, 1204
TspDTI	ATGAA	6 cut(s)	92, 111, 296, 432, 1001, 1181
TspGWI	ACGGA	3 cut(s)	261, 1535, 1590
TspRI	CASTG	2 cut(s)	1371, 1644
Van91I	CCANNNNNTGG	1 cut(s)	334
VpaK11BI	GGWCC	5 cut(s)	269, 352, 417, 687, 773
VspI	ATTAAT	1 cut(s)	89
XagI	CCTNNNNNAGG	1 cut(s)	1031
XapI	RAATTY	2 cut(s)	1185, 1213
XceI	RCATGY	2 cut(s)	112, 244
XmnI	GAANNNNTTC	1 cut(s)	287
XspI	CTAG	3 cut(s)	1052, 1182, 1199
ZrmI	AGTACT	1 cut(s)	1081
Zsp2I	ATGCAT	1 cut(s)	233

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.