Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0014208

Physical Location & Seq

Genomic Coordinates Forward (+)

27991165 .. 27993445

Gene Structure 2281 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G74470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1404 bp

ATGGCGACGACGGTTACACTCAAATCCTTCACCGGACTTCGTCAATCATCAACGGAGCAAACAAACTTCGTCTCTCATGTACCGTCATCACTTTCTCTCCCTCAACGACGGACCTCTCTCCGAGTAACCGCAGCCAGAGCCACTCCCAAACTCTCCAACCGTAAACTCCGTGTCGCCGTCATCGGTGGTGGACCAGCAGGCGGGGCAGCTGCAGAGACTCTAGCACAAGGAGGAATCGAGACGATTCTCATCGAGCGTAAGATGGACAATTGCAAGCCTTGCGGTGGCGCGATTCCTCTCTGTATGGTCGGAGAATTCAACTTGCCGTTGGATATTATTGATCGGAGAGTGACGAAGATGAAGATGATTTCGCCGTCGAACATTGCTGTTGATATTGGTCGTACGCTTAAGGAGCATGAGTATATAGGTATGGTGAGAAGAGAAGTTCTTGATGCTTATCTGAGAGAGAGAGCTGAGAAGAGTGGAGCCACTGTGATTAACGGTCTCTTCCTTAAGATGGATCATCCGGAGAATTGGGACTCGCCGTACACTTTGCATTACACTGAGTACGATGGTAAAACTGGAGCTACAGGGACGAAGAAAACAATGGAGGTTGATGCTGTCATTGGAGCTGATGGAGCTAACTCTAGGGTTGCTAAATCTATTGATGCTGGTGATTACGACTACGCAATTGCATTTCAGGAGAGGATTAGGATTCCTGATGAGAAAATGACTTACTATGAGGATTTAGCTGAGATGTATGTTGGAGATGATGTGTCGCCGGATTTCTATGGTTGGGTGTTCCCTAAGTGCGACCATGTAGCTGTTGGAACAGGTACTGTGACTCACAAAGGTGACATCAAGAAGTTCCAGCTCGCGACCAGAAACAGAGCTAAGGACAAGATTCTTGGAGGGAAGATCATCCGTGTGGAGGCTCATCCGATTCCTGAACATCCGAGACCACGTAGGCTCTCGAAACGTGTGGCTCTTGTAGGTGATGCTGCAGGGTATGTGACTAAATGCTCTGGTGAAGGGATCTACTTTGCTGCTAAGAGTGGAAGAATGTGTGCTGAAGCCATTGTCGAAGGTTCACAGAATGGTAAGAAGATGATTGACGAAGGGGACTTGAGGAAGTACTTGGAGAAATGGGATAAGACATACTTGCCTACCTACAGGGTACTTGATGTGTTGCAGAAAGTGTTTTACAGATCAAATCCGGCTAGAGAAGCGTTTGTGGAGATGTGTAATGATGAGTATGTTCAGAAGATGACATTCGATAGCTATCTGTACAAGCGGGTTGCGCCGGGTAGTCCTTTGGAGGATATCAAGTTGGCTGTGAACACCATTGGAAGTTTGGTTAGGGCTAATGCTCTAAGGAGAGAGATTGAGAAGCTTAGTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009941 GO:0016020 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035

KEGG Pathways

Metabolic & Signaling

ko00860 ko00900 ko01100 ko01110 map00860 map00900 map01100 map01110

Pfam Domains

Protein Families

FAD_binding_3 GIDA Pyr_redox_2

Protein Analysis

467

Amino Acids

51.84

Weight (kDa)

9.03

Isoelectric Point (pI)

41.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014208)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74470
fragaria_vesca	FvH4_5g14870
malus_domestica	MD06G1193900.v1.1 MD14G1201100.v1.1
prunus_persica	Prupe.5G194300_v2.0.a1 Prupe.5G194300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0181511
rosa_laevigata	RLG00000005187
rosa_multiflora	Rmu_co8215614.1_g000001 Rmu_sc0015269.1_g000003
rosa_roxburghii	Rroxscaffold_3G00271940
rosa_rugosa	Rorug06G0441900
rosa_samantha	Rh7AG044000 Rh7BG043100 Rh7CG044900 Rh7DG043600
rosa_wichuraiana	Rw7G003640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	290, 878
AccIII	TCCGGA	1 cut(s)	526
AciI	CCGC	4 cut(s)	129, 201, 282, 1294
AclWI	GGATC	2 cut(s)	528, 1043
AcsI	RAATTY	1 cut(s)	314
AcuI	CTGAAG	1 cut(s)	1092
AfaI	GTAC	8 cut(s)	81, 403, 548, 569, 838, 1136, 1179, 1289
AfiI	CCNNNNNNNGG	4 cut(s)	200, 284, 517, 931
AflII	CTTAAG	2 cut(s)	407, 512
AflIII	ACRYGT	1 cut(s)	979
AgsI	TTSAA	1 cut(s)	319
AleI	CACNNNNGTG	1 cut(s)	852
Alw26I	GTCTC	5 cut(s)	76, 209, 233, 509, 952
AlwI	GGATC	2 cut(s)	528, 1043
AlwNI	CAGNNNCTG	1 cut(s)	839
Aor13HI	TCCGGA	1 cut(s)	526
ApeKI	GCWGC	5 cut(s)	131, 206, 209, 1001, 1046
ApoI	RAATTY	1 cut(s)	314
AspLEI	GCGC	2 cut(s)	290, 1303
AspS9I	GGNCC	2 cut(s)	111, 191
AsuC2I	CCSGG	1 cut(s)	1305
AsuHPI	GGTGA	6 cut(s)	22, 445, 686, 866, 1007, 1040
AvaII	GGWCC	2 cut(s)	111, 191
BbvI	GCAGC	5 cut(s)	143, 196, 218, 988, 1033
BccI	CCATC	4 cut(s)	256, 511, 566, 629
BceAI	ACGGC	4 cut(s)	161, 310, 358, 529
BcnI	CCSGG	1 cut(s)	1305
BcoDI	GTCTC	5 cut(s)	76, 209, 233, 509, 952
BfaI	CTAG	3 cut(s)	221, 648, 1221
BfmI	CTRYAG	4 cut(s)	210, 588, 1002, 1171
BfrI	CTTAAG	2 cut(s)	407, 512
BisI	GCNGC	5 cut(s)	132, 207, 210, 1002, 1047
BlsI	GCNGC	5 cut(s)	133, 208, 211, 1003, 1048
BmcAI	AGTACT	1 cut(s)	1136
Bme1390I	CCNGG	1 cut(s)	1305
Bme18I	GGWCC	2 cut(s)	111, 191
BmgT120I	GGNCC	2 cut(s)	111, 191
BmiI	GGNNCC	1 cut(s)	487
BmrFI	CCNGG	1 cut(s)	1305
BmsI	GCATC	4 cut(s)	442, 607, 658, 988
BpmI	CTGGAG	1 cut(s)	603
Bpu10I	CCTNAGC	1 cut(s)	894
BpuEI	CTTGAG	1 cut(s)	1147
BpuMI	CCSGG	1 cut(s)	1305
BsaAI	YACGTR	1 cut(s)	965
BsaBI	GATNNNNATC	3 cut(s)	248, 456, 1281
BsaI	GGTCTC	2 cut(s)	509, 952
BsaWI	WCCGGW	2 cut(s)	32, 526
BsaXI	ACNNNNNCTCC	8 cut(s)	81, 111, 404, 434, 477, 507, 759, 789
Bsc4I	CCNNNNNNNGG	4 cut(s)	200, 284, 517, 931
Bse1I	ACTGG	1 cut(s)	586
Bse3DI	GCAATG	1 cut(s)	381
Bse8I	GATNNNNATC	3 cut(s)	248, 456, 1281
BseAI	TCCGGA	1 cut(s)	526
BseGI	GGATG	4 cut(s)	523, 921, 937, 952
BseJI	GATNNNNATC	3 cut(s)	248, 456, 1281
BseLI	CCNNNNNNNGG	4 cut(s)	200, 284, 517, 931
BseMI	GCAATG	1 cut(s)	381
BseMII	CTCAG	4 cut(s)	452, 465, 555, 744
BseNI	ACTGG	1 cut(s)	586
BseXI	GCAGC	5 cut(s)	143, 196, 218, 988, 1033
Bsh1236I	CGCG	2 cut(s)	290, 878
BsiSI	CCGG	5 cut(s)	33, 527, 782, 1217, 1304
BsiWI	CGTACG	1 cut(s)	401
BslFI	GGGAC	3 cut(s)	551, 607, 1136
BslI	CCNNNNNNNGG	4 cut(s)	200, 284, 517, 931
BsmAI	GTCTC	5 cut(s)	76, 209, 233, 509, 952
BsmBI	CGTCTC	2 cut(s)	76, 233
BsmFI	GGGAC	3 cut(s)	551, 607, 1136
Bso31I	GGTCTC	2 cut(s)	509, 952
Bsp13I	TCCGGA	1 cut(s)	526
Bsp1407I	TGTACA	1 cut(s)	1287
Bsp143I	GATC	5 cut(s)	340, 520, 918, 1035, 1208
Bsp68I	TCGCGA	1 cut(s)	878
BspACI	CCGC	4 cut(s)	129, 201, 282, 1294
BspCNI	CTCAG	4 cut(s)	453, 466, 556, 745
BspEI	TCCGGA	1 cut(s)	526
BspFNI	CGCG	2 cut(s)	290, 878
BspLI	GGNNCC	1 cut(s)	487
BspMAI	CTGCAG	2 cut(s)	214, 1006
BspPI	GGATC	2 cut(s)	528, 1043
BspTI	CTTAAG	2 cut(s)	407, 512
BspTNI	GGTCTC	2 cut(s)	509, 952
BsrDI	GCAATG	1 cut(s)	381
BsrGI	TGTACA	1 cut(s)	1287
BsrI	ACTGG	1 cut(s)	586
BssMI	GATC	5 cut(s)	340, 520, 918, 1035, 1208
Bst4CI	ACNGT	6 cut(s)	13, 84, 161, 493, 503, 841
Bst6I	CTCTTC	3 cut(s)	433, 473, 512
BstAFI	CTTAAG	2 cut(s)	407, 512
BstAPI	GCANNNNNTGC	1 cut(s)	279
BstAUI	TGTACA	1 cut(s)	1287
BstBAI	YACGTR	1 cut(s)	965
BstC8I	GCNNGC	3 cut(s)	199, 275, 876
BstDEI	CTNAG	9 cut(s)	461, 474, 564, 753, 807, 894, 1050, 1373, 1394
BstF5I	GGATG	4 cut(s)	523, 921, 937, 952
BstFNI	CGCG	2 cut(s)	290, 878
BstHHI	GCGC	2 cut(s)	290, 1303
BstKTI	GATC	5 cut(s)	343, 523, 921, 1038, 1211
BstMAI	GTCTC	5 cut(s)	76, 209, 233, 509, 952
BstMBI	GATC	5 cut(s)	340, 520, 918, 1035, 1208
BstMWI	GCNNNNNNNGC	7 cut(s)	137, 203, 279, 412, 638, 1226, 1300
BstSCI	CCNGG	1 cut(s)	1303
BstSFI	CTRYAG	4 cut(s)	210, 588, 1002, 1171
BstUI	CGCG	2 cut(s)	290, 878
BstV1I	GCAGC	5 cut(s)	143, 196, 218, 988, 1033
BstX2I	RGATCY	1 cut(s)	1035
BstYI	RGATCY	1 cut(s)	1035
BtsCI	GGATG	4 cut(s)	523, 921, 937, 952
BtsIMutI	CAGTG	2 cut(s)	489, 561
BtuMI	TCGCGA	1 cut(s)	878
Cac8I	GCNNGC	3 cut(s)	199, 275, 876
CaiI	CAGNNNCTG	1 cut(s)	839
CfoI	GCGC	2 cut(s)	290, 1303
Cfr13I	GGNCC	2 cut(s)	111, 191
Csp6I	GTAC	8 cut(s)	80, 402, 547, 568, 837, 1135, 1178, 1288
CviAII	CATG	3 cut(s)	77, 416, 818
CviQI	GTAC	8 cut(s)	80, 402, 547, 568, 837, 1135, 1178, 1288
DdeI	CTNAG	9 cut(s)	461, 474, 564, 753, 807, 894, 1050, 1373, 1394
DpnI	GATC	5 cut(s)	342, 522, 920, 1037, 1210
DpnII	GATC	5 cut(s)	340, 520, 918, 1035, 1208
Eam1104I	CTCTTC	3 cut(s)	433, 473, 512
EarI	CTCTTC	3 cut(s)	433, 473, 512
Eco31I	GGTCTC	2 cut(s)	509, 952
Eco32I	GATATC	1 cut(s)	1324
Eco47I	GGWCC	2 cut(s)	111, 191
Eco57I	CTGAAG	1 cut(s)	1092
EcoRI	GAATTC	1 cut(s)	314
EcoRV	GATATC	1 cut(s)	1324
Esp3I	CGTCTC	2 cut(s)	76, 233
FaeI	CATG	3 cut(s)	80, 419, 821
FalI	AAGNNNNNCTT	2 cut(s)	1145, 1177
FaqI	GGGAC	3 cut(s)	551, 607, 1136
FatI	CATG	3 cut(s)	76, 415, 817
FauI	CCCGC	2 cut(s)	194, 1287
Fnu4HI	GCNGC	5 cut(s)	132, 207, 210, 1002, 1047
FokI	GGATG	4 cut(s)	510, 908, 924, 939
Fsp4HI	GCNGC	5 cut(s)	132, 207, 210, 1002, 1047
FspBI	CTAG	3 cut(s)	221, 648, 1221
GlaI	GCGC	2 cut(s)	289, 1302
GluI	GCNGC	5 cut(s)	132, 207, 210, 1002, 1047
GsuI	CTGGAG	1 cut(s)	603
HapII	CCGG	5 cut(s)	33, 527, 782, 1217, 1304
HhaI	GCGC	2 cut(s)	290, 1303
Hin1II	CATG	3 cut(s)	80, 419, 821
Hin6I	GCGC	2 cut(s)	288, 1301
HinP1I	GCGC	2 cut(s)	288, 1301
HindIII	AAGCTT	1 cut(s)	1391
HinfI	GANTC	9 cut(s)	217, 234, 244, 292, 539, 715, 844, 904, 943
HpaII	CCGG	5 cut(s)	33, 527, 782, 1217, 1304
HphI	GGTGA	6 cut(s)	22, 445, 686, 866, 1007, 1040
Hpy166II	GTNNAC	5 cut(s)	164, 191, 549, 1091, 1339
Hpy188I	TCNGA	7 cut(s)	122, 311, 345, 462, 942, 957, 1263
Hpy188III	TCNNGA	9 cut(s)	238, 449, 527, 701, 719, 862, 877, 947, 973
Hpy8I	GTNNAC	5 cut(s)	164, 191, 549, 1091, 1339
Hpy99I	CGWCG	4 cut(s)	10, 13, 111, 379
HpyAV	CCTTC	4 cut(s)	37, 1025, 1079, 1112
HpyCH4III	ACNGT	6 cut(s)	13, 84, 161, 493, 503, 841
HpyCH4IV	ACGT	2 cut(s)	964, 979
HpyCH4V	TGCA	6 cut(s)	212, 273, 556, 695, 1004, 1192
HpyF10VI	GCNNNNNNNGC	7 cut(s)	137, 203, 279, 412, 638, 1226, 1300
HpyF3I	CTNAG	9 cut(s)	461, 474, 564, 753, 807, 894, 1050, 1373, 1394
HpySE526I	ACGT	2 cut(s)	964, 979
Hsp92II	CATG	3 cut(s)	80, 419, 821
HspAI	GCGC	2 cut(s)	288, 1301
Kpn2I	TCCGGA	1 cut(s)	526
Kzo9I	GATC	5 cut(s)	340, 520, 918, 1035, 1208
LmnI	GCTCC	6 cut(s)	55, 412, 485, 584, 629, 638
Lsp1109I	GCAGC	5 cut(s)	143, 196, 218, 988, 1033
LweI	GCATC	4 cut(s)	442, 607, 658, 988
MaeI	CTAG	3 cut(s)	221, 648, 1221
MaeII	ACGT	2 cut(s)	964, 979
MaeIII	GTNAC	6 cut(s)	13, 124, 349, 841, 854, 1012
MalI	GATC	5 cut(s)	342, 522, 920, 1037, 1210
MboI	GATC	5 cut(s)	340, 520, 918, 1035, 1208
MfeI	CAATTG	2 cut(s)	268, 690
MflI	RGATCY	1 cut(s)	1035
MluCI	AATT	4 cut(s)	268, 314, 532, 690
MlyI	GAGTC	3 cut(s)	211, 533, 838
MmeI	TCCRAC	5 cut(s)	180, 289, 309, 745, 808
MroI	TCCGGA	1 cut(s)	526
MseI	TTAA	4 cut(s)	408, 498, 513, 1402
MslI	CAYNNNNRTG	2 cut(s)	852, 926
MspA1I	CMGCKG	1 cut(s)	209
MspCI	CTTAAG	2 cut(s)	407, 512
MspI	CCGG	5 cut(s)	33, 527, 782, 1217, 1304
MspR9I	CCNGG	1 cut(s)	1305
MunI	CAATTG	2 cut(s)	268, 690
MvnI	CGCG	2 cut(s)	290, 878
MwoI	GCNNNNNNNGC	7 cut(s)	137, 203, 279, 412, 638, 1226, 1300
NciI	CCSGG	1 cut(s)	1305
NdeII	GATC	5 cut(s)	340, 520, 918, 1035, 1208
NlaIII	CATG	3 cut(s)	80, 419, 821
NlaIV	GGNNCC	1 cut(s)	487
NmuCI	GTSAC	4 cut(s)	349, 841, 854, 1012
NruI	TCGCGA	1 cut(s)	878
OliI	CACNNNNGTG	1 cut(s)	852
PfeI	GAWTC	6 cut(s)	234, 244, 292, 715, 904, 943
Pfl23II	CGTACG	1 cut(s)	401
PflFI	GACNNNGTC	1 cut(s)	39
PkrI	GCNGC	5 cut(s)	133, 208, 211, 1003, 1048
PleI	GAGTC	3 cut(s)	211, 533, 838
PpsI	GAGTC	3 cut(s)	211, 533, 838
Ppu21I	YACGTR	1 cut(s)	965
PspLI	CGTACG	1 cut(s)	401
PspN4I	GGNNCC	1 cut(s)	487
PspPI	GGNCC	2 cut(s)	111, 191
PstI	CTGCAG	2 cut(s)	214, 1006
PstNI	CAGNNNCTG	1 cut(s)	839
PsuI	RGATCY	1 cut(s)	1035
PsyI	GACNNNGTC	1 cut(s)	39
PvuII	CAGCTG	1 cut(s)	209
RruI	TCGCGA	1 cut(s)	878
RsaI	GTAC	8 cut(s)	81, 403, 548, 569, 838, 1136, 1179, 1289
RsaNI	GTAC	8 cut(s)	80, 402, 547, 568, 837, 1135, 1178, 1288
RseI	CAYNNNNRTG	2 cut(s)	852, 926
SaqAI	TTAA	4 cut(s)	408, 498, 513, 1402
SatI	GCNGC	5 cut(s)	132, 207, 210, 1002, 1047
Sau3AI	GATC	5 cut(s)	340, 520, 918, 1035, 1208
Sau96I	GGNCC	2 cut(s)	111, 191
ScaI	AGTACT	1 cut(s)	1136
SchI	GAGTC	3 cut(s)	211, 533, 838
ScrFI	CCNGG	1 cut(s)	1305
SfaNI	GCATC	4 cut(s)	442, 607, 658, 988
SfcI	CTRYAG	4 cut(s)	210, 588, 1002, 1171
SinI	GGWCC	2 cut(s)	111, 191
SmiMI	CAYNNNNRTG	2 cut(s)	852, 926
SmlI	CTYRAG	3 cut(s)	407, 512, 1126
SmoI	CTYRAG	3 cut(s)	407, 512, 1126
Sse9I	AATT	4 cut(s)	268, 314, 532, 690
SsiI	CCGC	4 cut(s)	129, 201, 282, 1294
SspMI	CTAG	3 cut(s)	221, 648, 1221
StyD4I	CCNGG	1 cut(s)	1303
TaaI	ACNGT	6 cut(s)	13, 84, 161, 493, 503, 841
TaiI	ACGT	2 cut(s)	967, 982
TaqI	TCGA	6 cut(s)	237, 252, 377, 974, 1083, 1275
TasI	AATT	4 cut(s)	268, 314, 532, 690
TatI	WGTACW	2 cut(s)	1134, 1287
TfiI	GAWTC	6 cut(s)	234, 244, 292, 715, 904, 943
Tru1I	TTAA	4 cut(s)	408, 498, 513, 1402
Tru9I	TTAA	4 cut(s)	408, 498, 513, 1402
TscAI	CASTG	2 cut(s)	496, 568
TseFI	GTSAC	4 cut(s)	349, 841, 854, 1012
TseI	GCWGC	5 cut(s)	131, 206, 209, 1001, 1046
Tsp45I	GTSAC	4 cut(s)	349, 841, 854, 1012
TspDTI	ATGAA	1 cut(s)	374
TspGWI	ACGGA	4 cut(s)	68, 124, 158, 914
TspRI	CASTG	2 cut(s)	496, 568
Tth111I	GACNNNGTC	1 cut(s)	39
Vha464I	CTTAAG	2 cut(s)	407, 512
VpaK11BI	GGWCC	2 cut(s)	111, 191
XapI	RAATTY	1 cut(s)	314
XcmI	CCANNNNNNNNNTGG	2 cut(s)	824, 1351
XspI	CTAG	3 cut(s)	221, 648, 1221
ZrmI	AGTACT	1 cut(s)	1136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.