Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0014208

Physical Location & Seq

Genomic Coordinates Forward (+)

65722384 .. 65724749

Gene Structure 2366 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005187

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGGCCTCCATTGCTCTCAAGTCCTTCGTCGGCCTCCGCCAATCCACCCTCGAAAACCCCAACTTCACCTCCCAGTCAAAGCCCATTTCCTCATTCCCATCACCACCGCGCACTTTCCGCGTCCTCGCTGCGAAAACCAGCCCGAAGGTAGCTGGCCGCAACCTCCGCGTCGCGGTCATCGGCGGCGGCCCAGCAGGCGGCGCGGCCGCCGAGACGCTGGCGAAGGGCGGAGTCGAGACGTTTCTTATTGAGCGGAAAATGGACAACTGCAAGCCCTGCGGCGGAGCTATCCCGCTCTGCATGGTGGGGGAGTTTGACCTGCCGTTGGATATCATTGACCGGAGAGTCACCAAGATGAAGATGATATCGCCGTCGAATGTGGCGGTGGATATCGGGCAGACGCTGAAGCCGCACGAGTATATTGGGATGGTGCGGCGAGAAGTGCTGGATAATTACCTGAGGAACAGGGCTAGTGAGAATGGGGCGAGTGTGATTAACGGGTTGTTTTTGAAGATGGATAGTCCGAGTCAGGGGGATGGGACCTCGCCGTATGTGTTGCATTATACTGAGTATGACGGCAAGGCCGGCGGGGTTGGTGTGAAGAAGACTTTGGAGGTTGATGCTGTGATTGGAGCTGATGGGGCTAATTCCAGAGTGGCTAAGTCCATTGATGCCGGTGATTATGAGTACGCGATTGCGTTTCAGGAGAGGATCAAGATCCCTGATGACAAAATGGTGTACTACGAGAACTTGGCAGAGATGTATGTAGGTGATGATGTGTCGCCAGACTTTTACGGGTGGGTGTTCCCCAAGTGTGATCATGTTGCAGTTGGAACAGGTACTGTGACTCACAAAGGGGACATCAAGAAGTTCCAGCTAGCAACAAGAAACCGAGCCAAGGACAAGATTTTAGGCGGAAAGATTCTACGAGTGGAGGCACATCCGATCCCTGAACACCCCCGCCCAAGAAGGCTAGCGGGGAGAGTAGCACTGGTCGGTGATGCAGCCGGGTATGTCACCAAATGCTCGGGTGAAGGTATCTACTTTGCAGCAAAGAGTGGAAGGATGTGTGCCGAGGCCATTGTTGAGGGATCACAGAATGGGAAGAGGATGATAAACGAAGGGGACTTGAGGAACTATTTGGAGAAGTGGGACAAGACTTACTGGCCGACTTACAAGGTGCTCGATATCTTGCAGAAGGTGTTTTACAGGTCGAACCCGGCGAGAGAAGCGTTTGTGGAGATGTGTGCAGATGAGTATGTGCAGAAGATGACCTTTGATAGTTATTTGTACAAAAGGGTGGTGCCTGGGAACCCATGGGAGGATTTGAAGTTGGCTGTGAATACCATTGGGAGCTTGGTTAGGGCTAATGCACTTAAGCAAGAGATGGAAAAAATCAACCGGAGTGCCCATCTCCGGCTAGAACTGCTCTCCCAACTGTCAACGCCATATTACCGTCGTGGACAGGATGTTTCTACCTTGATTGTTCTAGACCCGCAAGCATCATGCGATGGCCATAGCCTTCGGACCCCTCCAATTCTGGCACCGGTCCACCCAGCCAATCATGACTTTTTAAGACCCGCCCCGATCAAACCTAGCCCCAAAACACCACCATACGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006629 GO:0006644 GO:0006720 GO:0006721 GO:0006725 GO:0006766 GO:0006775 GO:0006778 GO:0006779 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009110 GO:0009987 GO:0010189 GO:0015994 GO:0015995 GO:0016114 GO:0016491 GO:0018130 GO:0019438 GO:0019637 GO:0033013 GO:0033014 GO:0033385 GO:0033519 GO:0033521 GO:0034641 GO:0042360 GO:0042362 GO:0042440 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0045550 GO:0046148 GO:0046483 GO:0051186 GO:0051188 GO:0055114 GO:0071704 GO:0090407 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00860 ko00900 ko01100 ko01110 map00860 map00900 map01100 map01110

Pfam Domains

Protein Families

FAD_binding_3 GIDA Pyr_redox_2

Protein Analysis

541

Amino Acids

59.46

Weight (kDa)

9.08

Isoelectric Point (pI)

42.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014208)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74470
fragaria_vesca	FvH4_5g14870
malus_domestica	MD06G1193900.v1.1 MD14G1201100.v1.1
prunus_persica	Prupe.5G194300_v2.0.a1 Prupe.5G194300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0181511
rosa_laevigata	RLG00000005187
rosa_multiflora	Rmu_co8215614.1_g000001 Rmu_sc0015269.1_g000003
rosa_roxburghii	Rroxscaffold_3G00271940
rosa_rugosa	Rorug06G0441900
rosa_samantha	Rh7AG044000 Rh7BG043100 Rh7CG044900 Rh7DG043600
rosa_wichuraiana	Rw7G003640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	344
Acc36I	ACCTGC	1 cut(s)	327
AccB1I	GGYRCC	2 cut(s)	1303, 1543
AccBSI	CCGCTC	2 cut(s)	253, 295
AccII	CGCG	6 cut(s)	109, 120, 168, 173, 203, 692
AclWI	GGATC	4 cut(s)	712, 719, 940, 1099
AcoI	YGGCCR	4 cut(s)	154, 204, 1166, 1513
AcuI	CTGAAG	1 cut(s)	425
AfaI	GTAC	4 cut(s)	689, 740, 841, 1292
AfiI	CCNNNNNNNGG	8 cut(s)	172, 197, 281, 325, 530, 898, 1321, 1416
AflII	CTTAAG	1 cut(s)	1376
AgeI	ACCGGT	1 cut(s)	1546
AgsI	TTSAA	2 cut(s)	511, 1330
AjnI	CCWGG	1 cut(s)	1306
AjuI	GAANNNNNNNTTGG	2 cut(s)	593, 625
AluBI	AGCT	5 cut(s)	152, 287, 635, 877, 1356
AluI	AGCT	5 cut(s)	152, 287, 635, 877, 1356
Alw21I	GWGCWC	1 cut(s)	1185
Alw26I	GTCTC	2 cut(s)	206, 230
AlwI	GGATC	4 cut(s)	712, 719, 940, 1099
AlwNI	CAGNNNCTG	2 cut(s)	403, 842
Ama87I	CYCGRG	1 cut(s)	1027
AoxI	GGCC	9 cut(s)	3, 31, 154, 187, 204, 582, 1077, 1166, 1513
ApeKI	GCWGC	3 cut(s)	128, 1004, 1049
AsiGI	ACCGGT	1 cut(s)	1546
AspLEI	GCGC	2 cut(s)	111, 203
AspS9I	GGNCC	4 cut(s)	188, 540, 1527, 1549
AsuC2I	CCSGG	2 cut(s)	1009, 1220
AsuHPI	GGTGA	8 cut(s)	58, 93, 340, 689, 782, 1009, 1010, 1043
AsuNHI	GCTAGC	2 cut(s)	877, 973
AvaI	CYCGRG	1 cut(s)	1027
AvaII	GGWCC	3 cut(s)	540, 1527, 1549
AxyI	CCTNAGG	1 cut(s)	458
BaeGI	GKGCMC	1 cut(s)	1411
BalI	TGGCCA	1 cut(s)	1515
BanI	GGYRCC	2 cut(s)	1303, 1543
BarI	GAAGNNNNNNTAC	2 cut(s)	1190, 1222
BauI	CACGAG	1 cut(s)	413
BbsI	GAAGAC	1 cut(s)	611
Bbv12I	GWGCWC	1 cut(s)	1185
BbvI	GCAGC	3 cut(s)	115, 1016, 1061
BccI	CCATC	8 cut(s)	106, 421, 508, 530, 632, 1381, 1419, 1505
BceAI	ACGGC	4 cut(s)	307, 355, 532, 592
BciT130I	CCWGG	1 cut(s)	1308
BclI	TGATCA	1 cut(s)	817
BcnI	CCSGG	2 cut(s)	1009, 1220
BcoDI	GTCTC	2 cut(s)	206, 230
BfaI	CTAG	6 cut(s)	471, 878, 974, 1421, 1490, 1596
BfrI	CTTAAG	1 cut(s)	1376
BfuAI	ACCTGC	1 cut(s)	327
BglI	GCCNNNNNGGC	1 cut(s)	195
Bme1390I	CCNGG	3 cut(s)	1009, 1220, 1308
Bme18I	GGWCC	3 cut(s)	540, 1527, 1549
BmeT110I	CYCGRG	1 cut(s)	1027
BmgT120I	GGNCC	4 cut(s)	188, 540, 1527, 1549
BmiI	GGNNCC	5 cut(s)	541, 1305, 1313, 1529, 1545
BmrFI	CCNGG	3 cut(s)	1009, 1220, 1308
BmrI	ACTGGG	1 cut(s)	67
BmsI	GCATC	4 cut(s)	610, 661, 991, 1511
BmtI	GCTAGC	2 cut(s)	881, 977
BmuI	ACTGGG	1 cut(s)	67
BpiI	GAAGAC	1 cut(s)	611
BpuEI	CTTGAG	1 cut(s)	1150
BpuMI	CCSGG	2 cut(s)	1009, 1220
BsaAI	YACGTR	1 cut(s)	1618
BsaBI	GATNNNNATC	1 cut(s)	716
BsaJI	CCNNGG	4 cut(s)	897, 1074, 1307, 1316
BsaWI	WCCGGW	3 cut(s)	339, 1401, 1546
BsaXI	ACNNNNNCTCC	2 cut(s)	53, 83
Bsc4I	CCNNNNNNNGG	8 cut(s)	172, 197, 281, 325, 530, 898, 1321, 1416
Bse118I	RCCGGY	3 cut(s)	584, 674, 1546
Bse1I	ACTGG	3 cut(s)	73, 996, 1169
Bse21I	CCTNAGG	1 cut(s)	458
Bse3DI	GCAATG	1 cut(s)	9
Bse8I	GATNNNNATC	1 cut(s)	716
BseBI	CCWGG	1 cut(s)	1308
BseDI	CCNNGG	4 cut(s)	897, 1074, 1307, 1316
BseGI	GGATG	6 cut(s)	432, 541, 940, 1071, 1116, 1474
BseJI	GATNNNNATC	1 cut(s)	716
BseLI	CCNNNNNNNGG	8 cut(s)	172, 197, 281, 325, 530, 898, 1321, 1416
BseMI	GCAATG	1 cut(s)	9
BseMII	CTCAG	2 cut(s)	449, 558
BseNI	ACTGG	3 cut(s)	73, 996, 1169
BseSI	GKGCMC	1 cut(s)	1411
BseX3I	CGGCCG	1 cut(s)	204
BseXI	GCAGC	3 cut(s)	115, 1016, 1061
BseYI	CCCAGC	2 cut(s)	190, 1555
BsgI	GTGCAG	2 cut(s)	1269, 1283
Bsh1236I	CGCG	6 cut(s)	109, 120, 168, 173, 203, 692
Bsh1285I	CGRYCG	1 cut(s)	207
BshFI	GGCC	9 cut(s)	5, 33, 156, 189, 206, 584, 1079, 1168, 1515
BshNI	GGYRCC	2 cut(s)	1303, 1543
BshTI	ACCGGT	1 cut(s)	1546
BsiEI	CGRYCG	1 cut(s)	207
BsiHKAI	GWGCWC	1 cut(s)	1185
BsiHKCI	CYCGRG	1 cut(s)	1027
BsiSI	CCGG	8 cut(s)	340, 585, 675, 1008, 1220, 1402, 1417, 1547
BslFI	GGGAC	4 cut(s)	553, 872, 1139, 1166
BslI	CCNNNNNNNGG	8 cut(s)	172, 197, 281, 325, 530, 898, 1321, 1416
BsmAI	GTCTC	2 cut(s)	206, 230
BsmBI	CGTCTC	2 cut(s)	206, 230
BsmFI	GGGAC	4 cut(s)	553, 872, 1139, 1166
BsnI	GGCC	9 cut(s)	5, 33, 156, 189, 206, 584, 1079, 1168, 1515
BsoBI	CYCGRG	1 cut(s)	1027
Bsp1286I	GDGCHC	2 cut(s)	1185, 1411
Bsp1407I	TGTACA	1 cut(s)	1290
Bsp143I	GATC	6 cut(s)	711, 717, 817, 945, 1091, 1587
Bsp19I	CCATGG	1 cut(s)	1316
BspANI	GGCC	9 cut(s)	5, 33, 156, 189, 206, 584, 1079, 1168, 1515
BspCNI	CTCAG	2 cut(s)	450, 559
BspFNI	CGCG	6 cut(s)	109, 120, 168, 173, 203, 692
BspHI	TCATGA	1 cut(s)	1564
BspLI	GGNNCC	5 cut(s)	541, 1305, 1313, 1529, 1545
BspMI	ACCTGC	1 cut(s)	327
BspOI	GCTAGC	2 cut(s)	881, 977
BspPI	GGATC	4 cut(s)	712, 719, 940, 1099
BspT107I	GGYRCC	2 cut(s)	1303, 1543
BspTI	CTTAAG	1 cut(s)	1376
BsrBI	CCGCTC	2 cut(s)	253, 295
BsrDI	GCAATG	1 cut(s)	9
BsrFI	RCCGGY	3 cut(s)	584, 674, 1546
BsrGI	TGTACA	1 cut(s)	1290
BsrI	ACTGG	3 cut(s)	73, 996, 1169
BssAI	RCCGGY	3 cut(s)	584, 674, 1546
BssECI	CCNNGG	4 cut(s)	897, 1074, 1307, 1316
BssMI	GATC	6 cut(s)	711, 717, 817, 945, 1091, 1587
BssSI	CACGAG	1 cut(s)	413
BssT1I	CCWWGG	2 cut(s)	897, 1316
Bst2BI	CACGAG	1 cut(s)	413
Bst2UI	CCWGG	1 cut(s)	1308
Bst4CI	ACNGT	3 cut(s)	844, 1440, 1457
Bst6I	CTCTTC	1 cut(s)	1100
BstAFI	CTTAAG	1 cut(s)	1376
BstAPI	GCANNNNNTGC	1 cut(s)	276
BstAUI	TGTACA	1 cut(s)	1290
BstBAI	YACGTR	1 cut(s)	1618
BstC8I	GCNNGC	8 cut(s)	154, 196, 219, 272, 586, 879, 975, 1500
BstDEI	CTNAG	3 cut(s)	458, 567, 660
BstDSI	CCRYGG	1 cut(s)	1316
BstF5I	GGATG	6 cut(s)	432, 541, 940, 1071, 1116, 1474
BstFNI	CGCG	6 cut(s)	109, 120, 168, 173, 203, 692
BstHHI	GCGC	2 cut(s)	111, 203
BstKTI	GATC	6 cut(s)	714, 720, 820, 948, 1094, 1590
BstMAI	GTCTC	2 cut(s)	206, 230
BstMBI	GATC	6 cut(s)	711, 717, 817, 945, 1091, 1587
BstMCI	CGRYCG	1 cut(s)	207
BstNI	CCWGG	1 cut(s)	1308
BstSCI	CCNGG	3 cut(s)	1007, 1218, 1306
BstSLI	GKGCMC	1 cut(s)	1411
BstSNI	TACGTA	1 cut(s)	1618
BstUI	CGCG	6 cut(s)	109, 120, 168, 173, 203, 692
BstV1I	GCAGC	3 cut(s)	115, 1016, 1061
BstV2I	GAAGAC	1 cut(s)	611
BstX2I	RGATCY	1 cut(s)	717
BstYI	RGATCY	1 cut(s)	717
BstZI	CGGCCG	1 cut(s)	204
Bsu36I	CCTNAGG	1 cut(s)	458
BsuRI	GGCC	9 cut(s)	5, 33, 156, 189, 206, 584, 1079, 1168, 1515
BtgI	CCRYGG	1 cut(s)	1316
BtgZI	GCGATG	1 cut(s)	1524
BtsCI	GGATG	6 cut(s)	432, 541, 940, 1071, 1116, 1474
BtsIMutI	CAGTG	1 cut(s)	989
BveI	ACCTGC	1 cut(s)	327
Cac8I	GCNNGC	8 cut(s)	154, 196, 219, 272, 586, 879, 975, 1500
CaiI	CAGNNNCTG	2 cut(s)	403, 842
CciI	TCATGA	1 cut(s)	1564
CciNI	GCGGCCGC	1 cut(s)	204
CfoI	GCGC	2 cut(s)	111, 203
Cfr10I	RCCGGY	3 cut(s)	584, 674, 1546
Cfr13I	GGNCC	4 cut(s)	188, 540, 1527, 1549
CseI	GACGC	4 cut(s)	109, 157, 223, 409
Csp6I	GTAC	4 cut(s)	688, 739, 840, 1291
CspAI	ACCGGT	1 cut(s)	1546
CviAII	CATG	5 cut(s)	301, 821, 1317, 1506, 1565
CviQI	GTAC	4 cut(s)	688, 739, 840, 1291
DdeI	CTNAG	3 cut(s)	458, 567, 660
DpnI	GATC	6 cut(s)	713, 719, 819, 947, 1093, 1589
DpnII	GATC	6 cut(s)	711, 717, 817, 945, 1091, 1587
DrdI	GACNNNNNNGTC	1 cut(s)	344
DseDI	GACNNNNNNGTC	1 cut(s)	344
EaeI	YGGCCR	4 cut(s)	154, 204, 1166, 1513
EagI	CGGCCG	1 cut(s)	204
Eam1104I	CTCTTC	1 cut(s)	1100
EarI	CTCTTC	1 cut(s)	1100
EciI	GGCGGA	4 cut(s)	26, 243, 297, 930
EclXI	CGGCCG	1 cut(s)	204
Eco105I	TACGTA	1 cut(s)	1618
Eco130I	CCWWGG	2 cut(s)	897, 1316
Eco32I	GATATC	4 cut(s)	331, 366, 391, 1189
Eco47I	GGWCC	3 cut(s)	540, 1527, 1549
Eco52I	CGGCCG	1 cut(s)	204
Eco57I	CTGAAG	1 cut(s)	425
Eco81I	CCTNAGG	1 cut(s)	458
Eco88I	CYCGRG	1 cut(s)	1027
EcoO109I	RGGNCCY	1 cut(s)	540
EcoRII	CCWGG	1 cut(s)	1306
EcoRV	GATATC	4 cut(s)	331, 366, 391, 1189
EcoT14I	CCWWGG	2 cut(s)	897, 1316
ErhI	CCWWGG	2 cut(s)	897, 1316
Esp3I	CGTCTC	2 cut(s)	206, 230
FaeI	CATG	5 cut(s)	304, 824, 1320, 1509, 1568
FalI	AAGNNNNNCTT	2 cut(s)	1259, 1291
FaqI	GGGAC	4 cut(s)	553, 872, 1139, 1166
FatI	CATG	5 cut(s)	300, 820, 1316, 1505, 1564
FauI	CCCGC	6 cut(s)	300, 581, 968, 970, 1503, 1588
FbaI	TGATCA	1 cut(s)	817
FokI	GGATG	6 cut(s)	439, 548, 927, 1078, 1123, 1481
FspBI	CTAG	6 cut(s)	471, 878, 974, 1421, 1490, 1596
GlaI	GCGC	2 cut(s)	110, 202
GsaI	CCCAGC	2 cut(s)	194, 1559
HaeIII	GGCC	9 cut(s)	5, 33, 156, 189, 206, 584, 1079, 1168, 1515
HapII	CCGG	8 cut(s)	340, 585, 675, 1008, 1220, 1402, 1417, 1547
HgaI	GACGC	4 cut(s)	109, 157, 223, 409
HhaI	GCGC	2 cut(s)	111, 203
Hin1II	CATG	5 cut(s)	304, 824, 1320, 1509, 1568
Hin6I	GCGC	2 cut(s)	109, 201
HinP1I	GCGC	2 cut(s)	109, 201
HincII	GTYRAC	1 cut(s)	1443
HindII	GTYRAC	1 cut(s)	1443
HinfI	GANTC	5 cut(s)	231, 345, 526, 847, 922
HpaII	CCGG	8 cut(s)	340, 585, 675, 1008, 1220, 1402, 1417, 1547
HphI	GGTGA	8 cut(s)	58, 93, 340, 689, 782, 1009, 1010, 1043
Hpy166II	GTNNAC	4 cut(s)	739, 1443, 1463, 1552
Hpy188I	TCNGA	3 cut(s)	525, 945, 1527
Hpy188III	TCNNGA	7 cut(s)	235, 651, 704, 715, 865, 1490, 1565
Hpy8I	GTNNAC	4 cut(s)	739, 1443, 1463, 1552
Hpy99I	CGWCG	4 cut(s)	32, 173, 376, 1461
HpyAV	CCTTC	9 cut(s)	34, 139, 217, 963, 1028, 1056, 1115, 1192, 1532
HpyCH4III	ACNGT	3 cut(s)	844, 1440, 1457
HpyCH4IV	ACGT	2 cut(s)	239, 1617
HpyF3I	CTNAG	3 cut(s)	458, 567, 660
HpySE526I	ACGT	2 cut(s)	239, 1617
Hsp92II	CATG	5 cut(s)	304, 824, 1320, 1509, 1568
HspAI	GCGC	2 cut(s)	109, 201
KroI	GCCGGC	1 cut(s)	584
KroNI	GCCGGC	1 cut(s)	586
Ksp22I	TGATCA	1 cut(s)	817
Kzo9I	GATC	6 cut(s)	711, 717, 817, 945, 1091, 1587
LmnI	GCTCC	3 cut(s)	284, 632, 1353
Lsp1109I	GCAGC	3 cut(s)	115, 1016, 1061
LweI	GCATC	4 cut(s)	610, 661, 991, 1511
MaeI	CTAG	6 cut(s)	471, 878, 974, 1421, 1490, 1596
MaeII	ACGT	2 cut(s)	239, 1617
MaeIII	GTNAC	3 cut(s)	346, 844, 1015
MalI	GATC	6 cut(s)	713, 719, 819, 947, 1093, 1589
MbiI	CCGCTC	2 cut(s)	253, 295
MboI	GATC	6 cut(s)	711, 717, 817, 945, 1091, 1587
MboII	GAAGA	6 cut(s)	370, 523, 613, 616, 1117, 1279
MflI	RGATCY	1 cut(s)	717
MhlI	GDGCHC	2 cut(s)	1185, 1411
MlsI	TGGCCA	1 cut(s)	1515
MluCI	AATT	3 cut(s)	451, 646, 1536
MluNI	TGGCCA	1 cut(s)	1515
MlyI	GAGTC	4 cut(s)	240, 354, 535, 841
MmeI	TCCRAC	2 cut(s)	306, 811
Mox20I	TGGCCA	1 cut(s)	1515
MroNI	GCCGGC	1 cut(s)	584
MscI	TGGCCA	1 cut(s)	1515
MseI	TTAA	3 cut(s)	495, 1377, 1574
MslI	CAYNNNNRTG	1 cut(s)	353
Msp20I	TGGCCA	1 cut(s)	1515
MspCI	CTTAAG	1 cut(s)	1376
MspI	CCGG	8 cut(s)	340, 585, 675, 1008, 1220, 1402, 1417, 1547
MspR9I	CCNGG	3 cut(s)	1009, 1220, 1308
MvaI	CCWGG	1 cut(s)	1308
MvnI	CGCG	6 cut(s)	109, 120, 168, 173, 203, 692
NaeI	GCCGGC	1 cut(s)	586
NciI	CCSGG	2 cut(s)	1009, 1220
NcoI	CCATGG	1 cut(s)	1316
NdeII	GATC	6 cut(s)	711, 717, 817, 945, 1091, 1587
NgoMIV	GCCGGC	1 cut(s)	584
NheI	GCTAGC	2 cut(s)	877, 973
NlaIII	CATG	5 cut(s)	304, 824, 1320, 1509, 1568
NlaIV	GGNNCC	5 cut(s)	541, 1305, 1313, 1529, 1545
NmeAIII	GCCGAG	2 cut(s)	235, 1099
NmuCI	GTSAC	3 cut(s)	346, 844, 1015
NotI	GCGGCCGC	1 cut(s)	204
PagI	TCATGA	1 cut(s)	1564
PcsI	WCGNNNNNNNCGW	1 cut(s)	1220
PdiI	GCCGGC	1 cut(s)	586
PfeI	GAWTC	1 cut(s)	922
PinAI	ACCGGT	1 cut(s)	1546
PleI	GAGTC	4 cut(s)	239, 353, 534, 841
PpsI	GAGTC	4 cut(s)	239, 353, 534, 841
Ppu21I	YACGTR	1 cut(s)	1618
PpuMI	RGGWCCY	1 cut(s)	540
Psp5II	RGGWCCY	1 cut(s)	540
Psp6I	CCWGG	1 cut(s)	1306
PspFI	CCCAGC	2 cut(s)	190, 1555
PspGI	CCWGG	1 cut(s)	1306
PspN4I	GGNNCC	5 cut(s)	541, 1305, 1313, 1529, 1545
PspPI	GGNCC	4 cut(s)	188, 540, 1527, 1549
PspPPI	RGGWCCY	1 cut(s)	540
PstNI	CAGNNNCTG	2 cut(s)	403, 842
PsuI	RGATCY	1 cut(s)	717
RsaI	GTAC	4 cut(s)	689, 740, 841, 1292
RsaNI	GTAC	4 cut(s)	688, 739, 840, 1291
RseI	CAYNNNNRTG	1 cut(s)	353
SaqAI	TTAA	3 cut(s)	495, 1377, 1574
Sau3AI	GATC	6 cut(s)	711, 717, 817, 945, 1091, 1587
Sau96I	GGNCC	4 cut(s)	188, 540, 1527, 1549
SchI	GAGTC	4 cut(s)	240, 354, 535, 841
ScrFI	CCNGG	3 cut(s)	1009, 1220, 1308
SduI	GDGCHC	2 cut(s)	1185, 1411
SfaNI	GCATC	4 cut(s)	610, 661, 991, 1511
SinI	GGWCC	3 cut(s)	540, 1527, 1549
SmiMI	CAYNNNNRTG	1 cut(s)	353
SmlI	CTYRAG	3 cut(s)	17, 1129, 1376
SmoI	CTYRAG	3 cut(s)	17, 1129, 1376
SnaBI	TACGTA	1 cut(s)	1618
Sse9I	AATT	3 cut(s)	451, 646, 1536
SspMI	CTAG	6 cut(s)	471, 878, 974, 1421, 1490, 1596
StyD4I	CCNGG	3 cut(s)	1007, 1218, 1306
StyI	CCWWGG	2 cut(s)	897, 1316
TaaI	ACNGT	3 cut(s)	844, 1440, 1457
TaiI	ACGT	2 cut(s)	242, 1620
TaqI	TCGA	5 cut(s)	51, 234, 374, 1185, 1214
TasI	AATT	3 cut(s)	451, 646, 1536
TatI	WGTACW	2 cut(s)	738, 1290
TauI	GCSGC	9 cut(s)	159, 186, 189, 201, 206, 209, 282, 412, 436
TfiI	GAWTC	1 cut(s)	922
Tru1I	TTAA	3 cut(s)	495, 1377, 1574
Tru9I	TTAA	3 cut(s)	495, 1377, 1574
TscAI	CASTG	1 cut(s)	996
TseFI	GTSAC	3 cut(s)	346, 844, 1015
TseI	GCWGC	3 cut(s)	128, 1004, 1049
Tsp45I	GTSAC	3 cut(s)	346, 844, 1015
TspDTI	ATGAA	1 cut(s)	371
TspRI	CASTG	1 cut(s)	996
Vha464I	CTTAAG	1 cut(s)	1376
VpaK11BI	GGWCC	3 cut(s)	540, 1527, 1549
XbaI	TCTAGA	1 cut(s)	1489
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1354
XspI	CTAG	6 cut(s)	471, 878, 974, 1421, 1490, 1596

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.