Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015179

Physical Location & Seq

Genomic Coordinates Reverse (-)

28574740 .. 28577700

Gene Structure 2961 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G76150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 930 bp

ATGGCGACTAGCGATTCTGAATTCAATTCTGATCTTCTTCTCGCTCACAAGCTTCCCGAGACGCGTTACACCTACAATGAAAGAGATGTAGCAATCTATGCTTTGGGAATCGGCGCTTGTGGCCAAGATGCTGTGGATTCCGATGAGCTCAAGTTTGTGTATCACAGAAATGGGCAGGATTTGATCCAGGTCTTACCAACTTTTGCTTCACTATTCACACTTGGATCTTTGACAGAAGGACTGGATTTGCCAGGTTTTAAATATGATCCTAGTCTCTTGTTGCATGGGCAGCAGTATATTGAAATATACAGGCCATTACCTTCCAAGGCTTCCTTAATTAACAAAGTAAGCCTCGCTGGTTTGCAAGATAAAGGTAAAGCAGCTATCCTTGAATTAGAAACCAGAAGTTACGAGGAAGGGTCAGGGGAACTGTTATGCATGAATAGGACGACTGTTTTCCTAAGAGGTGCTGGTGGTTTCTCAAATTCATCTCAACCATTCTCTTACAAAAACTATCCAAGTAACCAGGGCTTAGCTGTGAAAATCCCACAAAGACAACCTTTGACAGTGTGCGAAGAGCGCACTCAGCCATCGCAGGCATTACTTTATAGGCTGTCTGGTGACTATAATCCTCTGCATTCAGATCCAGAATTTGCAAAACTTGCCGGATTCCCACGCCCGATATTGCATGGGCTATGCACACTCGGGTTTGCAATCAAGGCAATCATCAAGTGTGTTTGCAAGGGTGACCCAACTGCTGTCAAAACCATATCTGGACGATTCCTCACGACTGTTTTTCCTGGCGAAACTCTGATAACCGAAATGTGGCTTGAAGGCTTGAGGGTTATATATCAGACGAAAGTGAAGGAAAGGAACAAAACTGTGTTAGCTGGTTATGTTGATATTCGTGGGTTATCTTCGTCACTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009987 GO:0016042 GO:0016054 GO:0016829 GO:0016835 GO:0016836 GO:0019395 GO:0019752 GO:0030258 GO:0032787 GO:0033542 GO:0034440 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0055114 GO:0071704 GO:0072329 GO:0080023 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MaoC_dehydrat_N MaoC_dehydratas

Protein Analysis

309

Amino Acids

34.08

Weight (kDa)

6.95

Isoelectric Point (pI)

38.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFE-2_hydrat-2_N	PF22622	23 - 156	8.9e-36	MFE-2 hydratase 2 N-terminal domain
MaoC_dehydratas	PF01575	183 - 295	1.4e-29	MaoC like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015179)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76150
fragaria_vesca	FvH4_2g37800 FvH4_2g37800
malus_domestica	MD08G1005200.v1.1
prunus_persica	Prupe.1G357300_v2.0.a1 Prupe.1G357300_v2.0.a1
pyrus_communis	pycom08g00420
rosa_chinensis	RchiOBHm_Chr6g0303911
rosa_laevigata	RLG00000011035
rosa_roxburghii	Rroxscaffold_7G00164270
rosa_rugosa	Rorug06G0325900
rosa_samantha	Rh6AG440100 Rh6BG462900 Rh6CG452400 Rh6DG439400
rosa_wichuraiana	Rw6G038110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	64
AclWI	GGATC	4 cut(s)	178, 232, 260, 638
AcoI	YGGCCR	1 cut(s)	121
AcsI	RAATTY	3 cut(s)	20, 484, 650
AfiI	CCNNNNNNNGG	1 cut(s)	825
AflIII	ACRYGT	1 cut(s)	62
AgsI	TTSAA	4 cut(s)	25, 302, 392, 833
AjnI	CCWGG	4 cut(s)	186, 250, 525, 799
AjuI	GAANNNNNNNTTGG	2 cut(s)	190, 222
AluBI	AGCT	5 cut(s)	52, 148, 383, 536, 890
AluI	AGCT	5 cut(s)	52, 148, 383, 536, 890
Alw21I	GWGCWC	1 cut(s)	150
Alw26I	GTCTC	2 cut(s)	53, 278
AlwI	GGATC	4 cut(s)	178, 232, 260, 638
Ama87I	CYCGRG	2 cut(s)	56, 704
AoxI	GGCC	2 cut(s)	121, 311
ApeKI	GCWGC	2 cut(s)	289, 380
ApoI	RAATTY	3 cut(s)	20, 484, 650
AspLEI	GCGC	2 cut(s)	116, 582
AsuHPI	GGTGA	2 cut(s)	632, 758
AvaI	CYCGRG	2 cut(s)	56, 704
BalI	TGGCCA	1 cut(s)	123
BanII	GRGCYC	1 cut(s)	150
Bbv12I	GWGCWC	1 cut(s)	150
BbvI	GCAGC	2 cut(s)	301, 392
BccI	CCATC	1 cut(s)	598
BciT130I	CCWGG	4 cut(s)	188, 252, 527, 801
BcoDI	GTCTC	2 cut(s)	53, 278
BfaI	CTAG	2 cut(s)	9, 270
BfoI	RGCGCY	1 cut(s)	117
BisI	GCNGC	2 cut(s)	290, 381
BlpI	GCTNAGC	1 cut(s)	532
BlsI	GCNGC	2 cut(s)	291, 382
Bme1390I	CCNGG	4 cut(s)	188, 252, 527, 801
BmeT110I	CYCGRG	2 cut(s)	56, 704
BmrFI	CCNGG	4 cut(s)	188, 252, 527, 801
BmsI	GCATC	1 cut(s)	118
Bpu1102I	GCTNAGC	1 cut(s)	532
BpuEI	CTTGAG	2 cut(s)	134, 859
BsaJI	CCNNGG	2 cut(s)	324, 526
Bsc4I	CCNNNNNNNGG	1 cut(s)	825
Bse1I	ACTGG	1 cut(s)	246
BseBI	CCWGG	4 cut(s)	188, 252, 527, 801
BseDI	CCNNGG	2 cut(s)	324, 526
BseLI	CCNNNNNNNGG	1 cut(s)	825
BseMII	CTCAG	1 cut(s)	599
BseNI	ACTGG	1 cut(s)	246
BseXI	GCAGC	2 cut(s)	301, 392
Bsh1236I	CGCG	1 cut(s)	64
BshFI	GGCC	2 cut(s)	123, 313
BsiHKAI	GWGCWC	1 cut(s)	150
BsiHKCI	CYCGRG	2 cut(s)	56, 704
BsiSI	CCGG	1 cut(s)	666
BslI	CCNNNNNNNGG	1 cut(s)	825
BsmAI	GTCTC	2 cut(s)	53, 278
BsmBI	CGTCTC	1 cut(s)	53
BsmI	GAATGC	1 cut(s)	637
BsnI	GGCC	2 cut(s)	123, 313
BsoBI	CYCGRG	2 cut(s)	56, 704
Bsp1286I	GDGCHC	1 cut(s)	150
Bsp143I	GATC	5 cut(s)	31, 183, 224, 265, 643
Bsp1720I	GCTNAGC	1 cut(s)	532
BspANI	GGCC	2 cut(s)	123, 313
BspCNI	CTCAG	1 cut(s)	598
BspFNI	CGCG	1 cut(s)	64
BspPI	GGATC	4 cut(s)	178, 232, 260, 638
BspQI	GCTCTTC	1 cut(s)	570
BsrI	ACTGG	1 cut(s)	246
BssECI	CCNNGG	2 cut(s)	324, 526
BssMI	GATC	5 cut(s)	31, 183, 224, 265, 643
BssT1I	CCWWGG	1 cut(s)	324
Bst2UI	CCWGG	4 cut(s)	188, 252, 527, 801
Bst4CI	ACNGT	5 cut(s)	432, 454, 568, 793, 883
Bst6I	CTCTTC	1 cut(s)	570
BstAPI	GCANNNNNTGC	2 cut(s)	98, 662
BstC8I	GCNNGC	1 cut(s)	597
BstDEI	CTNAG	3 cut(s)	461, 532, 585
BstEII	GGTNACC	1 cut(s)	746
BstFNI	CGCG	1 cut(s)	64
BstH2I	RGCGCY	1 cut(s)	117
BstHHI	GCGC	2 cut(s)	116, 582
BstKTI	GATC	5 cut(s)	34, 186, 227, 268, 646
BstMAI	GTCTC	2 cut(s)	53, 278
BstMBI	GATC	5 cut(s)	31, 183, 224, 265, 643
BstMWI	GCNNNNNNNGC	7 cut(s)	98, 120, 289, 579, 586, 662, 719
BstNI	CCWGG	4 cut(s)	188, 252, 527, 801
BstPI	GGTNACC	1 cut(s)	746
BstSCI	CCNGG	4 cut(s)	186, 250, 525, 799
BstUI	CGCG	1 cut(s)	64
BstV1I	GCAGC	2 cut(s)	301, 392
BstX2I	RGATCY	2 cut(s)	224, 643
BstYI	RGATCY	2 cut(s)	224, 643
BsuRI	GGCC	2 cut(s)	123, 313
BtgZI	GCGATG	1 cut(s)	576
BtsIMutI	CAGTG	1 cut(s)	573
Cac8I	GCNNGC	1 cut(s)	597
CfoI	GCGC	2 cut(s)	116, 582
CseI	GACGC	1 cut(s)	70
CviAII	CATG	3 cut(s)	284, 439, 689
DdeI	CTNAG	3 cut(s)	461, 532, 585
DpnI	GATC	5 cut(s)	33, 185, 226, 267, 645
DpnII	GATC	5 cut(s)	31, 183, 224, 265, 643
DraI	TTTAAA	1 cut(s)	259
EaeI	YGGCCR	1 cut(s)	121
Eam1104I	CTCTTC	1 cut(s)	570
EarI	CTCTTC	1 cut(s)	570
Ecl136II	GAGCTC	1 cut(s)	148
Eco130I	CCWWGG	1 cut(s)	324
Eco24I	GRGCYC	1 cut(s)	150
Eco53kI	GAGCTC	1 cut(s)	148
Eco88I	CYCGRG	2 cut(s)	56, 704
Eco91I	GGTNACC	1 cut(s)	746
EcoICRI	GAGCTC	1 cut(s)	148
EcoO65I	GGTNACC	1 cut(s)	746
EcoRI	GAATTC	1 cut(s)	20
EcoRII	CCWGG	4 cut(s)	186, 250, 525, 799
EcoT14I	CCWWGG	1 cut(s)	324
EcoT22I	ATGCAT	1 cut(s)	440
EcoT38I	GRGCYC	1 cut(s)	150
ErhI	CCWWGG	1 cut(s)	324
Esp3I	CGTCTC	1 cut(s)	53
FaeI	CATG	3 cut(s)	287, 442, 692
FalI	AAGNNNNNCTT	4 cut(s)	317, 349, 544, 576
FatI	CATG	3 cut(s)	283, 438, 688
Fnu4HI	GCNGC	2 cut(s)	290, 381
FriOI	GRGCYC	1 cut(s)	150
Fsp4HI	GCNGC	2 cut(s)	290, 381
FspBI	CTAG	2 cut(s)	9, 270
GlaI	GCGC	2 cut(s)	115, 581
GluI	GCNGC	2 cut(s)	290, 381
HaeII	RGCGCY	1 cut(s)	117
HaeIII	GGCC	2 cut(s)	123, 313
HapII	CCGG	1 cut(s)	666
HgaI	GACGC	1 cut(s)	70
HhaI	GCGC	2 cut(s)	116, 582
Hin1II	CATG	3 cut(s)	287, 442, 692
Hin6I	GCGC	2 cut(s)	114, 580
HinP1I	GCGC	2 cut(s)	114, 580
HindIII	AAGCTT	1 cut(s)	50
HinfI	GANTC	5 cut(s)	14, 108, 137, 669, 780
HpaII	CCGG	1 cut(s)	666
HphI	GGTGA	2 cut(s)	632, 758
Hpy188I	TCNGA	6 cut(s)	19, 31, 142, 643, 813, 855
Hpy188III	TCNNGA	4 cut(s)	56, 647, 774, 787
HpyAV	CCTTC	5 cut(s)	230, 330, 410, 827, 859
HpyCH4III	ACNGT	5 cut(s)	432, 454, 568, 793, 883
HpyCH4V	TGCA	9 cut(s)	283, 364, 438, 637, 656, 688, 699, 713, 741
HpyF10VI	GCNNNNNNNGC	7 cut(s)	98, 120, 289, 579, 586, 662, 719
HpyF3I	CTNAG	3 cut(s)	461, 532, 585
Hsp92II	CATG	3 cut(s)	287, 442, 692
HspAI	GCGC	2 cut(s)	114, 580
Kzo9I	GATC	5 cut(s)	31, 183, 224, 265, 643
LguI	GCTCTTC	1 cut(s)	570
Lsp1109I	GCAGC	2 cut(s)	301, 392
LweI	GCATC	1 cut(s)	118
MaeI	CTAG	2 cut(s)	9, 270
MaeIII	GTNAC	6 cut(s)	65, 407, 521, 620, 746, 921
MalI	GATC	5 cut(s)	33, 185, 226, 267, 645
MboI	GATC	5 cut(s)	31, 183, 224, 265, 643
MboII	GAAGA	4 cut(s)	26, 29, 587, 909
MflI	RGATCY	2 cut(s)	224, 643
MhlI	GDGCHC	1 cut(s)	150
MlsI	TGGCCA	1 cut(s)	123
MluCI	AATT	6 cut(s)	20, 25, 336, 392, 484, 650
MluI	ACGCGT	1 cut(s)	62
MluNI	TGGCCA	1 cut(s)	123
MnlI	CCTC	6 cut(s)	362, 406, 458, 642, 794, 834
Mox20I	TGGCCA	1 cut(s)	123
Mph1103I	ATGCAT	1 cut(s)	440
MscI	TGGCCA	1 cut(s)	123
MseI	TTAA	3 cut(s)	258, 335, 339
MslI	CAYNNNNRTG	1 cut(s)	168
Msp20I	TGGCCA	1 cut(s)	123
MspI	CCGG	1 cut(s)	666
MspR9I	CCNGG	4 cut(s)	188, 252, 527, 801
Mva1269I	GAATGC	1 cut(s)	637
MvaI	CCWGG	4 cut(s)	188, 252, 527, 801
MvnI	CGCG	1 cut(s)	64
MwoI	GCNNNNNNNGC	7 cut(s)	98, 120, 289, 579, 586, 662, 719
NdeII	GATC	5 cut(s)	31, 183, 224, 265, 643
NlaIII	CATG	3 cut(s)	287, 442, 692
NmuCI	GTSAC	3 cut(s)	620, 746, 921
NsiI	ATGCAT	1 cut(s)	440
PacI	TTAATTAA	1 cut(s)	339
PciSI	GCTCTTC	1 cut(s)	570
PctI	GAATGC	1 cut(s)	637
PfeI	GAWTC	5 cut(s)	14, 108, 137, 669, 780
PkrI	GCNGC	2 cut(s)	291, 382
Psp124BI	GAGCTC	1 cut(s)	150
Psp6I	CCWGG	4 cut(s)	186, 250, 525, 799
PspEI	GGTNACC	1 cut(s)	746
PspGI	CCWGG	4 cut(s)	186, 250, 525, 799
PsuI	RGATCY	2 cut(s)	224, 643
RseI	CAYNNNNRTG	1 cut(s)	168
SacI	GAGCTC	1 cut(s)	150
SapI	GCTCTTC	1 cut(s)	570
SaqAI	TTAA	3 cut(s)	258, 335, 339
SatI	GCNGC	2 cut(s)	290, 381
Sau3AI	GATC	5 cut(s)	31, 183, 224, 265, 643
ScrFI	CCNGG	4 cut(s)	188, 252, 527, 801
SduI	GDGCHC	1 cut(s)	150
SfaNI	GCATC	1 cut(s)	118
SmiMI	CAYNNNNRTG	1 cut(s)	168
SmlI	CTYRAG	2 cut(s)	149, 838
SmoI	CTYRAG	2 cut(s)	149, 838
Sse9I	AATT	6 cut(s)	20, 25, 336, 392, 484, 650
SspMI	CTAG	2 cut(s)	9, 270
SstI	GAGCTC	1 cut(s)	150
StyD4I	CCNGG	4 cut(s)	186, 250, 525, 799
StyI	CCWWGG	1 cut(s)	324
TaaI	ACNGT	5 cut(s)	432, 454, 568, 793, 883
TasI	AATT	6 cut(s)	20, 25, 336, 392, 484, 650
TfiI	GAWTC	5 cut(s)	14, 108, 137, 669, 780
Tru1I	TTAA	3 cut(s)	258, 335, 339
Tru9I	TTAA	3 cut(s)	258, 335, 339
TscAI	CASTG	1 cut(s)	573
TseFI	GTSAC	3 cut(s)	620, 746, 921
TseI	GCWGC	2 cut(s)	289, 380
Tsp45I	GTSAC	3 cut(s)	620, 746, 921
TspDTI	ATGAA	3 cut(s)	93, 455, 477
TspRI	CASTG	1 cut(s)	573
XapI	RAATTY	3 cut(s)	20, 484, 650
XspI	CTAG	2 cut(s)	9, 270
Zsp2I	ATGCAT	1 cut(s)	440

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.