Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0015179

Physical Location & Seq

Genomic Coordinates Forward (+)

33077368 .. 33081173

Gene Structure 3806 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G357300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 993 bp

ATGTCGTCGGATGCGTCGGAGTTCGATCCTAATCGTATCGAGTCTTACAAATTCCCTGAGACGACATACACCTATTCGGAGAGAGATGTAGCGCTCTATGCTTTGGGTATTGGAGCTTGCGCCCGGGATGCTGTGGACGTCGACCAACTTAAATTTGTTTACCATGACAAGGGCCAGAAGTTTATCCAGGTCTTGCCAACATTTGCTGCTCTGTTCTCGCTTGGATCTCTGCCAGGTGGTTTAGGTCTGCCGGGGTTGAAATATGATCCTCGTCTTTTGCTGCATGGACAACAGTACATAGAATTATACAAGCCACTTCCTTCAAATGCTTGTTTAAAAAATACTGTGAGTCTTGCTGGACTCCATGATAAAGGTAAAGCTGCTATTCTTGAGATTGAAACAAAAAGTTATGACAAAGATTCTGGTGCATTGTTATGCATGAATCGGACAACTGCCTTTCTGAGAGGTGCTGGTGGCTTCTCAAAATCATCTCATCCATATTCATATTCAAACTATCCAAAGGACAAGGTTCCATCTGTGAAAATCCCAAAAGGTCAACCTTTTGTAGTGTTTGAAGATTGTACACAACCATCTCAGGCATGTAGCATTTATTTCACTATTGCAAGAATGAAAGTCATCGTCTCATACCTCCTAGTTTTAGCATTGCTGTATAGGCTATCTGGAGATTATAATCCTCTGCATTCAGATCCTACGTTCGCAAAAGTTGCAGGATTCACACGGCCGATACTGCATGGCTTGTGCACACTTGGATTTTCAGTTAGGGCGATTGTGAAATGCATTTGCAGAGGAGATCCAAACCTGGTCAAATGCATATCAGGCCGATTCCTTTTACATGTCTACCCTGGTGAAACTTTGCTCACTGAAATGTGGCTTGAAGGCTTAAGGGTCATATATCAAACAAAGGTGAAAGAACGAAGCCGGACAGTGCTTTCTGGATATGTGGATCTCCATGGTTTATCTTCGTCGCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006629 GO:0006631 GO:0006635 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009987 GO:0016042 GO:0016054 GO:0016829 GO:0016835 GO:0016836 GO:0019395 GO:0019752 GO:0030258 GO:0032787 GO:0033542 GO:0034440 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0055114 GO:0071704 GO:0072329 GO:0080023 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MaoC_dehydrat_N MaoC_dehydratas

Protein Analysis

331

Amino Acids

36.49

Weight (kDa)

8.9

Isoelectric Point (pI)

36.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015179)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76150
fragaria_vesca	FvH4_2g37800 FvH4_2g37800
malus_domestica	MD08G1005200.v1.1
prunus_persica	Prupe.1G357300_v2.0.a1 Prupe.1G357300_v2.0.a1
pyrus_communis	pycom08g00420
rosa_chinensis	RchiOBHm_Chr6g0303911
rosa_laevigata	RLG00000011035
rosa_roxburghii	Rroxscaffold_7G00164270
rosa_rugosa	Rorug06G0325900
rosa_samantha	Rh6AG440100 Rh6BG462900 Rh6CG452400 Rh6DG439400
rosa_wichuraiana	Rw6G038110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	690
AatII	GACGTC	1 cut(s)	141
AccI	GTMKAC	2 cut(s)	141, 858
AclWI	GGATC	6 cut(s)	20, 232, 260, 701, 806, 972
AcoI	YGGCCR	1 cut(s)	740
AcsI	RAATTY	2 cut(s)	50, 152
AcyI	GRCGYC	1 cut(s)	138
AfaI	GTAC	2 cut(s)	296, 583
AfeI	AGCGCT	1 cut(s)	93
AfiI	CCNNNNNNNGG	1 cut(s)	169
AflII	CTTAAG	1 cut(s)	901
AflIII	ACRYGT	1 cut(s)	853
AgsI	TTSAA	6 cut(s)	259, 324, 398, 510, 575, 896
AjnI	CCWGG	4 cut(s)	186, 232, 819, 862
AluBI	AGCT	2 cut(s)	116, 380
AluI	AGCT	2 cut(s)	116, 380
Alw21I	GWGCWC	1 cut(s)	764
Alw26I	GTCTC	2 cut(s)	53, 646
Alw44I	GTGCAC	1 cut(s)	760
AlwI	GGATC	6 cut(s)	20, 232, 260, 701, 806, 972
Ama87I	CYCGRG	1 cut(s)	123
Aor51HI	AGCGCT	1 cut(s)	93
AoxI	GGCC	3 cut(s)	172, 740, 838
ApaLI	GTGCAC	1 cut(s)	760
ApeKI	GCWGC	3 cut(s)	206, 280, 380
ApoI	RAATTY	2 cut(s)	50, 152
AspLEI	GCGC	2 cut(s)	94, 122
AspS9I	GGNCC	1 cut(s)	172
AsuC2I	CCSGG	3 cut(s)	124, 125, 252
AsuHPI	GGTGA	2 cut(s)	878, 937
AvaI	CYCGRG	1 cut(s)	123
BaeGI	GKGCMC	1 cut(s)	764
Bbv12I	GWGCWC	1 cut(s)	764
BbvI	GCAGC	3 cut(s)	193, 267, 367
BccI	CCATC	2 cut(s)	541, 598
BceAI	ACGGC	1 cut(s)	755
BciT130I	CCWGG	4 cut(s)	188, 234, 821, 864
BcnI	CCSGG	3 cut(s)	124, 125, 252
BcoDI	GTCTC	2 cut(s)	53, 646
BfaI	CTAG	1 cut(s)	653
BfoI	RGCGCY	1 cut(s)	95
BfrI	CTTAAG	1 cut(s)	901
BisI	GCNGC	3 cut(s)	207, 281, 381
BlsI	GCNGC	3 cut(s)	208, 282, 382
Bme1390I	CCNGG	7 cut(s)	124, 125, 188, 234, 252, 821, 864
BmeT110I	CYCGRG	1 cut(s)	123
BmgT120I	GGNCC	1 cut(s)	172
BmiI	GGNNCC	1 cut(s)	531
BmrFI	CCNGG	7 cut(s)	124, 125, 188, 234, 252, 821, 864
BmsI	GCATC	1 cut(s)	118
BpmI	CTGGAG	1 cut(s)	702
BpuEI	CTTGAG	1 cut(s)	410
BpuMI	CCSGG	3 cut(s)	124, 125, 252
BsaBI	GATNNNNATC	2 cut(s)	30, 690
BsaHI	GRCGYC	1 cut(s)	138
BsaJI	CCNNGG	4 cut(s)	123, 251, 862, 970
Bsc4I	CCNNNNNNNGG	1 cut(s)	169
Bse3DI	GCAATG	1 cut(s)	662
Bse8I	GATNNNNATC	2 cut(s)	30, 690
BseBI	CCWGG	4 cut(s)	188, 234, 821, 864
BseDI	CCNNGG	4 cut(s)	123, 251, 862, 970
BseGI	GGATG	3 cut(s)	16, 133, 493
BseJI	GATNNNNATC	2 cut(s)	30, 690
BseLI	CCNNNNNNNGG	1 cut(s)	169
BseMI	GCAATG	1 cut(s)	662
BseMII	CTCAG	3 cut(s)	48, 452, 608
BseRI	GAGGAG	1 cut(s)	822
BseSI	GKGCMC	1 cut(s)	764
BseX3I	CGGCCG	1 cut(s)	740
BseXI	GCAGC	3 cut(s)	193, 267, 367
Bsh1285I	CGRYCG	1 cut(s)	743
BshFI	GGCC	3 cut(s)	174, 742, 840
BsiEI	CGRYCG	1 cut(s)	743
BsiHKAI	GWGCWC	1 cut(s)	764
BsiHKCI	CYCGRG	1 cut(s)	123
BsiSI	CCGG	3 cut(s)	124, 251, 940
BslI	CCNNNNNNNGG	1 cut(s)	169
BsmAI	GTCTC	2 cut(s)	53, 646
BsmBI	CGTCTC	2 cut(s)	53, 646
BsmI	GAATGC	1 cut(s)	700
BsnI	GGCC	3 cut(s)	174, 742, 840
BsoBI	CYCGRG	1 cut(s)	123
Bsp1286I	GDGCHC	1 cut(s)	764
Bsp1407I	TGTACA	1 cut(s)	581
Bsp143I	GATC	6 cut(s)	25, 224, 265, 706, 811, 964
Bsp19I	CCATGG	1 cut(s)	970
BspANI	GGCC	3 cut(s)	174, 742, 840
BspCNI	CTCAG	3 cut(s)	49, 453, 607
BspLI	GGNNCC	1 cut(s)	531
BspPI	GGATC	6 cut(s)	20, 232, 260, 701, 806, 972
BspTI	CTTAAG	1 cut(s)	901
BsrDI	GCAATG	1 cut(s)	662
BsrGI	TGTACA	1 cut(s)	581
BssECI	CCNNGG	4 cut(s)	123, 251, 862, 970
BssMI	GATC	6 cut(s)	25, 224, 265, 706, 811, 964
BssNI	GRCGYC	1 cut(s)	138
BssT1I	CCWWGG	1 cut(s)	970
Bst2UI	CCWGG	4 cut(s)	188, 234, 821, 864
Bst4CI	ACNGT	3 cut(s)	294, 346, 946
BstACI	GRCGYC	1 cut(s)	138
BstAFI	CTTAAG	1 cut(s)	901
BstAPI	GCANNNNNTGC	1 cut(s)	725
BstAUI	TGTACA	1 cut(s)	581
BstC8I	GCNNGC	1 cut(s)	118
BstDEI	CTNAG	3 cut(s)	57, 461, 594
BstDSI	CCRYGG	1 cut(s)	970
BstF5I	GGATG	3 cut(s)	16, 133, 493
BstH2I	RGCGCY	1 cut(s)	95
BstHHI	GCGC	2 cut(s)	94, 122
BstKTI	GATC	6 cut(s)	28, 227, 268, 709, 814, 967
BstMAI	GTCTC	2 cut(s)	53, 646
BstMBI	GATC	6 cut(s)	25, 224, 265, 706, 811, 964
BstMCI	CGRYCG	1 cut(s)	743
BstMWI	GCNNNNNNNGC	6 cut(s)	98, 128, 673, 725, 748, 837
BstNI	CCWGG	4 cut(s)	188, 234, 821, 864
BstNSI	RCATGY	2 cut(s)	603, 857
BstSCI	CCNGG	7 cut(s)	122, 123, 186, 232, 250, 819, 862
BstSLI	GKGCMC	1 cut(s)	764
BstV1I	GCAGC	3 cut(s)	193, 267, 367
BstX2I	RGATCY	4 cut(s)	224, 706, 811, 964
BstYI	RGATCY	4 cut(s)	224, 706, 811, 964
BstZI	CGGCCG	1 cut(s)	740
BsuRI	GGCC	3 cut(s)	174, 742, 840
BtgI	CCRYGG	1 cut(s)	970
BtsCI	GGATG	3 cut(s)	16, 133, 493
BtsIMutI	CAGTG	2 cut(s)	879, 951
Cac8I	GCNNGC	1 cut(s)	118
CfoI	GCGC	2 cut(s)	94, 122
Cfr13I	GGNCC	1 cut(s)	172
Cfr9I	CCCGGG	1 cut(s)	123
CseI	GACGC	1 cut(s)	3
CsiI	ACCWGGT	1 cut(s)	819
Csp6I	GTAC	2 cut(s)	295, 582
CviAII	CATG	8 cut(s)	164, 284, 365, 439, 600, 752, 854, 971
CviQI	GTAC	2 cut(s)	295, 582
DdeI	CTNAG	3 cut(s)	57, 461, 594
DpnI	GATC	6 cut(s)	27, 226, 267, 708, 813, 966
DpnII	GATC	6 cut(s)	25, 224, 265, 706, 811, 964
DraI	TTTAAA	1 cut(s)	336
EaeI	YGGCCR	1 cut(s)	740
EagI	CGGCCG	1 cut(s)	740
EclXI	CGGCCG	1 cut(s)	740
Eco130I	CCWWGG	1 cut(s)	970
Eco47III	AGCGCT	1 cut(s)	93
Eco52I	CGGCCG	1 cut(s)	740
Eco88I	CYCGRG	1 cut(s)	123
EcoRII	CCWGG	4 cut(s)	186, 232, 819, 862
EcoT14I	CCWWGG	1 cut(s)	970
EcoT22I	ATGCAT	3 cut(s)	440, 800, 833
ErhI	CCWWGG	1 cut(s)	970
Esp3I	CGTCTC	2 cut(s)	53, 646
FaeI	CATG	8 cut(s)	167, 287, 368, 442, 603, 755, 857, 974
FatI	CATG	8 cut(s)	163, 283, 364, 438, 599, 751, 853, 970
FblI	GTMKAC	2 cut(s)	141, 858
Fnu4HI	GCNGC	3 cut(s)	207, 281, 381
FokI	GGATG	3 cut(s)	23, 140, 480
Fsp4HI	GCNGC	3 cut(s)	207, 281, 381
FspBI	CTAG	1 cut(s)	653
GlaI	GCGC	2 cut(s)	93, 121
GluI	GCNGC	3 cut(s)	207, 281, 381
GsuI	CTGGAG	1 cut(s)	702
HaeII	RGCGCY	1 cut(s)	95
HaeIII	GGCC	3 cut(s)	174, 742, 840
HapII	CCGG	3 cut(s)	124, 251, 940
HgaI	GACGC	1 cut(s)	3
HhaI	GCGC	2 cut(s)	94, 122
Hin1I	GRCGYC	1 cut(s)	138
Hin1II	CATG	8 cut(s)	167, 287, 368, 442, 603, 755, 857, 974
Hin6I	GCGC	2 cut(s)	92, 120
HinP1I	GCGC	2 cut(s)	92, 120
HincII	GTYRAC	2 cut(s)	142, 557
HindII	GTYRAC	2 cut(s)	142, 557
HinfI	GANTC	7 cut(s)	41, 349, 360, 419, 442, 732, 843
HpaII	CCGG	3 cut(s)	124, 251, 940
HphI	GGTGA	2 cut(s)	878, 937
Hpy166II	GTNNAC	7 cut(s)	136, 142, 160, 557, 584, 762, 859
Hpy188I	TCNGA	6 cut(s)	10, 19, 79, 447, 462, 706
Hpy188III	TCNNGA	3 cut(s)	389, 681, 954
Hpy8I	GTNNAC	7 cut(s)	136, 142, 160, 557, 584, 762, 859
Hpy99I	CGWCG	4 cut(s)	10, 19, 143, 988
HpyAV	CCTTC	2 cut(s)	330, 890
HpyCH4III	ACNGT	3 cut(s)	294, 346, 946
HpyCH4IV	ACGT	2 cut(s)	138, 713
HpyF10VI	GCNNNNNNNGC	6 cut(s)	98, 128, 673, 725, 748, 837
HpyF3I	CTNAG	3 cut(s)	57, 461, 594
HpySE526I	ACGT	2 cut(s)	138, 713
Hsp92I	GRCGYC	1 cut(s)	138
Hsp92II	CATG	8 cut(s)	167, 287, 368, 442, 603, 755, 857, 974
HspAI	GCGC	2 cut(s)	92, 120
Kzo9I	GATC	6 cut(s)	25, 224, 265, 706, 811, 964
LmnI	GCTCC	1 cut(s)	113
Lsp1109I	GCAGC	3 cut(s)	193, 267, 367
LweI	GCATC	1 cut(s)	118
MabI	ACCWGGT	1 cut(s)	819
MaeI	CTAG	1 cut(s)	653
MaeII	ACGT	2 cut(s)	138, 713
MalI	GATC	6 cut(s)	27, 226, 267, 708, 813, 966
MboI	GATC	6 cut(s)	25, 224, 265, 706, 811, 964
MboII	GAAGA	2 cut(s)	587, 972
MflI	RGATCY	4 cut(s)	224, 706, 811, 964
MhlI	GDGCHC	1 cut(s)	764
MluCI	AATT	3 cut(s)	50, 152, 302
MlyI	GAGTC	3 cut(s)	50, 354, 358
MnlI	CCTC	5 cut(s)	279, 458, 659, 705, 800
Mph1103I	ATGCAT	3 cut(s)	440, 800, 833
MseI	TTAA	3 cut(s)	150, 335, 902
MslI	CAYNNNNRTG	2 cut(s)	433, 884
MspCI	CTTAAG	1 cut(s)	901
MspI	CCGG	3 cut(s)	124, 251, 940
MspR9I	CCNGG	7 cut(s)	124, 125, 188, 234, 252, 821, 864
Mva1269I	GAATGC	1 cut(s)	700
MvaI	CCWGG	4 cut(s)	188, 234, 821, 864
MwoI	GCNNNNNNNGC	6 cut(s)	98, 128, 673, 725, 748, 837
NciI	CCSGG	3 cut(s)	124, 125, 252
NcoI	CCATGG	1 cut(s)	970
NdeII	GATC	6 cut(s)	25, 224, 265, 706, 811, 964
NlaIII	CATG	8 cut(s)	167, 287, 368, 442, 603, 755, 857, 974
NlaIV	GGNNCC	1 cut(s)	531
NsiI	ATGCAT	3 cut(s)	440, 800, 833
NspI	RCATGY	2 cut(s)	603, 857
PciI	ACATGT	1 cut(s)	853
PcsI	WCGNNNNNNNCGW	1 cut(s)	11
PctI	GAATGC	1 cut(s)	700
PfeI	GAWTC	4 cut(s)	419, 442, 732, 843
PkrI	GCNGC	3 cut(s)	208, 282, 382
PleI	GAGTC	3 cut(s)	49, 354, 357
PpsI	GAGTC	3 cut(s)	49, 354, 357
PscI	ACATGT	1 cut(s)	853
PsiI	TTATAA	1 cut(s)	690
Psp6I	CCWGG	4 cut(s)	186, 232, 819, 862
PspGI	CCWGG	4 cut(s)	186, 232, 819, 862
PspN4I	GGNNCC	1 cut(s)	531
PspPI	GGNCC	1 cut(s)	172
PsuI	RGATCY	4 cut(s)	224, 706, 811, 964
RsaI	GTAC	2 cut(s)	296, 583
RsaNI	GTAC	2 cut(s)	295, 582
RseI	CAYNNNNRTG	2 cut(s)	433, 884
SalI	GTCGAC	1 cut(s)	140
SaqAI	TTAA	3 cut(s)	150, 335, 902
SatI	GCNGC	3 cut(s)	207, 281, 381
Sau3AI	GATC	6 cut(s)	25, 224, 265, 706, 811, 964
Sau96I	GGNCC	1 cut(s)	172
SchI	GAGTC	3 cut(s)	50, 354, 358
ScrFI	CCNGG	7 cut(s)	124, 125, 188, 234, 252, 821, 864
SduI	GDGCHC	1 cut(s)	764
SexAI	ACCWGGT	1 cut(s)	819
SfaNI	GCATC	1 cut(s)	118
SmaI	CCCGGG	1 cut(s)	125
SmiMI	CAYNNNNRTG	2 cut(s)	433, 884
SmlI	CTYRAG	2 cut(s)	389, 901
SmoI	CTYRAG	2 cut(s)	389, 901
Sse9I	AATT	3 cut(s)	50, 152, 302
SspMI	CTAG	1 cut(s)	653
StyD4I	CCNGG	7 cut(s)	122, 123, 186, 232, 250, 819, 862
StyI	CCWWGG	1 cut(s)	970
TaaI	ACNGT	3 cut(s)	294, 346, 946
TaiI	ACGT	2 cut(s)	141, 716
TaqI	TCGA	3 cut(s)	24, 39, 141
TasI	AATT	3 cut(s)	50, 152, 302
TatI	WGTACW	2 cut(s)	294, 581
TfiI	GAWTC	4 cut(s)	419, 442, 732, 843
Tru1I	TTAA	3 cut(s)	150, 335, 902
Tru9I	TTAA	3 cut(s)	150, 335, 902
TscAI	CASTG	2 cut(s)	886, 951
TseI	GCWGC	3 cut(s)	206, 280, 380
TspDTI	ATGAA	3 cut(s)	455, 492, 644
TspMI	CCCGGG	1 cut(s)	123
TspRI	CASTG	2 cut(s)	886, 951
Vha464I	CTTAAG	1 cut(s)	901
VneI	GTGCAC	1 cut(s)	760
XapI	RAATTY	2 cut(s)	50, 152
XceI	RCATGY	2 cut(s)	603, 857
XmaI	CCCGGG	1 cut(s)	123
XmiI	GTMKAC	2 cut(s)	141, 858
XspI	CTAG	1 cut(s)	653
ZraI	GACGTC	1 cut(s)	139
Zsp2I	ATGCAT	3 cut(s)	440, 800, 833

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.