Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012332

Physical Location & Seq

Genomic Coordinates Forward (+)

29900443 .. 29903319

Gene Structure 2877 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G79490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2511 bp

ATGATCCGTGGAAGAACCGCGAAAGTAATTCCCAGAAATGTCATTTTTACGCTTAGTAGGAGTTCCATTTCTGAGTCTCCATTGATTTCTCCGAGTCGAATAAACCCTAAATTAGCCGGTAGTTTCTCGTTCAACATCCGATTATTGAGCTATTTCACTGTTAGAAATGGCTTTTGTCCCGATTGTTCTGTACCGAGAGACCCTAATTTTGTTGGATTGACTACACAATGTCGGAGTATTGTCAGGAGGTTTTGTAGTGAAAAGATTGGAAGTAGTGAATCTAGTGGCTGGACAGAGGAGGTTGAGTATTTAGATGAGTCGGGTAGTGTACTACACAGTGGTAAGGGAATAAGATCAGTAGAGCCAGGGCTTGATGACCATGTAATGGTTGGTGGATTGAAGAAGCCTTACATGAATGCTTCTTCTGTTGCAAAGATTGTTGAAGTTGTTCAGAGGTGGAAATGGGGACCGGAGTTGGAGACTCAGTTAGATAAACTCCAGTTTGTTCCGAATATGGTTCATATTACGCAGTCTTTGAAGATTGTTAAAGAGGTTGATGCGGCGCTGAGTCTGTTTAGGTGGGCTAAGAAGCAGCCTTGGTATCTGCCTTCGGATGAATGTTATGTCGTGTTGTTTGATGGGTTGAACCAGGGAAGGGATTTTGTTGGGATTCAGTCGTTGTTTGAGGAGATGGTTCAAGACTCGAGTAGTCACGGTGATTTGTCGTTTAACGCCTATAACCAAGTGATTCAGTATTTGGCTAAAGCTGAGAAACTGGAGGTTGCTTTTTGTTGTTTCAAAAAGGCTCAAGAGTCGGGATGCAAAATTGATACGCAGACATATAATAATCTAATGATGTTGTTTCTGAACAAAGGTCTCCCGTATAAGGCATTTGAGATTTATGAGAGCATGGAGAAAACTGATAGTTTGTTGGATGGGTCAACTTATGAGCTGATAATTCCAAGCTTGGCCAAATCCGGCCGTCTTGATGCAGCTTTCAAGCTTTTTCAGCAAATGAAAGAAAGGAAACTCCGACCAAGCTTTAGTGTGTTTTCTTCGCTTGTTGATTCAATGGGGAAAGCTGGTCGATTGGACACATCAATGAAGGTTTACATGGAAATGCAGGGATTTGGCCATAGGCCATCAGCAACTATGTTTGTTTCCTTGATTGATTCATATGCTAAAGCTGGTAAGCTGGATACTGCTCTTAGGCTTTGGGATGAGATGAAGAAGTCAGGTTTCAGGCCAAACTTTGGATTGTACACAATGATCATTGAATCTCATGCAAAATCAGGAAAGCTTGAAGTAGCAATGACGGTTTTCAAAGACATGGAGAAAGCTGGGTTTTTACCGACACCATCCACATATTCGTGTCTATTGGAGATGCATGCTGGATCTGGGCAAGTAGACTCTGCAATGAAAATCTATAACTCCATGACTAATGCTGGGTTAAGGCCTGGCCTGAGCAGTTATATTTCTCTTCTTACACTTCTGGCCAACAAAAGACTTGTCGATGTTGCTGGGAAGATACTACTCGAGATGAAAGCAATGGGGTATTCCGTAGATGTCTGCGCTAGCGATGTTTTGATGATATATATCAAAGATGCTTCTGTGGATCTTGCTCTGAAATGGCTTAGGTTCATGGGTTCTTCAGGGATCAAAACAAACAATTTTATCATCAGGCAGTTATTTGAATCATGCATGAAAAATGGTCTATACGATTCAGCTAGGCCTTTGCTGGAGACACTCGTGCATTCTGCTGGAAAAGTTGACTTGGTGCTTTACACTTCGATTCTCGCCCATCTTGTCAGATGCCAAGACGAAGATAAAGAGAGACAATTGATGTCAATCCTCAGCGCTACCAAGCATAAAGCTCATGCCTTTATGTGTGGTCTCTTCACAGGTCCAGAACAGAGGAAACAACCAGTTCTAACGTTTGTCAGAGAGTTTTACCAAGGGATTGATTACGAACTCGAAGAAGGAGCTGCTAGGTACTTTGTGAATGTCCTTCTCAACTACCTTGTCTTGATGGGTCAAATAAACCGAGCTCGATGTGTCTGGAAAGTAGCGTACGAGAACAAACTCTTTCCAAAAGCCATCGTCTTTGATCAACACATTGCTTGGTCTCTCGATGTGAGAAACTTATCTGTCGGAGCTGCGCTCATAGCCGTGGTTCACACTCTCCACAGGTTCAGAAAACGAATGCTTTACTACGGAGTAGTCCCGAGACGTATAAAGCTAGTCACAGGACCGACATTGAAGATTGTAATTGCTCAAATGCTGAGCTCTGTTGAGTCGCCTTTTGAAGTCAGCAAAGTCGTCTTGAGGGCACCAGGAGAGTTGGTGATGGAGTGGTTCAAGAAACCGATCGTGCAACAGTTTCTTCTGAACGAGATCCCATCACGGTCTGATATATTGATGCATAAGATGAACGTGATGTTCCCAAGCTCGGCTCCTGAGCTTAGATCTATGTCACCTCCCAAACCACTCATGTCATCGAAAGCGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

836

Amino Acids

94.17

Weight (kDa)

9.18

Isoelectric Point (pI)

39.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	245 - 285	6.8e-07	PPR repeat family
PPR_long	PF17177	246 - 398	1.2e-09	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	315 - 358	8.9e-07	PPR repeat family
PPR_long	PF17177	364 - 469	4.3e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	371 - 426	1.1e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	378 - 410	4.1e-06	PPR repeat
PPR_2	PF13041	384 - 417	1.7e-07	PPR repeat family
PPR	PF01535	385 - 414	2.1e-07	PPR repeat
PPR_long	PF17177	397 - 498	2.3e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	404 - 463	1.3e-09	Pentatricopeptide repeat domain
TPR_24	PF23276	419 - 529	1.1e-09	Fungal tetratrico peptide repeats
PPR_2	PF13041	421 - 462	1.9e-08	PPR repeat family
PPR_2	PF13041	454 - 499	3.6e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0012332)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79490
fragaria_vesca	FvH4_3g14450 FvH4_3g14450
malus_domestica	MD05G1236700.v1.1
prunus_persica	Prupe.4G129400_v2.0.a1
pyrus_communis	pycom05g21360
rosa_chinensis	RchiOBHm_Chr5g0023761
rosa_laevigata	RLG00000032735
rosa_multiflora	Rmu_sc0001372.1_g000009 Rmu_ssc0000027.1_g000014
rosa_roxburghii	Rroxscaffold_1G00055430
rosa_rugosa	Rorug05G0079500
rosa_samantha	Rh5AG169500 Rh5BG166900 Rh5CG182500 Rh5DG168800
rosa_wichuraiana	Rw0G001560 Rw0G005010 Rw5G015330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2329
AccB7I	CCANNNNNTGG	2 cut(s)	385, 1253
AccI	GTMKAC	1 cut(s)	1407
AccII	CGCG	1 cut(s)	20
AciI	CCGC	2 cut(s)	18, 560
AclI	AACGTT	1 cut(s)	1934
AclWI	GGATC	4 cut(s)	1402, 1623, 1664, 2389
AcoI	YGGCCR	4 cut(s)	969, 979, 1132, 1494
AcuI	CTGAAG	1 cut(s)	1635
AfaI	GTAC	5 cut(s)	192, 330, 1262, 1994, 2072
AfeI	AGCGCT	1 cut(s)	1858
AfiI	CCNNNNNNNGG	5 cut(s)	385, 655, 886, 1253, 2449
AjnI	CCWGG	4 cut(s)	364, 648, 1456, 2332
Alw21I	GWGCWC	2 cut(s)	2050, 2288
Alw26I	GTCTC	9 cut(s)	81, 192, 473, 881, 1736, 1828, 1898, 2130, 2221
AlwI	GGATC	4 cut(s)	1402, 1623, 1664, 2389
Ama87I	CYCGRG	3 cut(s)	703, 1535, 2224
Aor51HI	AGCGCT	1 cut(s)	1858
AoxI	GGCC	9 cut(s)	969, 979, 1132, 1139, 1244, 1454, 1459, 1494, 1730
ApeKI	GCWGC	4 cut(s)	592, 992, 1985, 2156
ArsI	GACNNNNNNTTYG	4 cut(s)	191, 223, 1494, 1526
Asp700I	GAANNNNTTC	2 cut(s)	447, 2504
AspLEI	GCGC	4 cut(s)	565, 1574, 1859, 2161
AspS9I	GGNCC	3 cut(s)	467, 1904, 2249
AsuHPI	GGTGA	3 cut(s)	728, 2356, 2466
AsuNHI	GCTAGC	1 cut(s)	1574
AvaI	CYCGRG	3 cut(s)	703, 1535, 2224
AvaII	GGWCC	3 cut(s)	467, 1904, 2249
BaeGI	GKGCMC	1 cut(s)	2332
BalI	TGGCCA	3 cut(s)	971, 1134, 1496
BanI	GGYRCC	1 cut(s)	2329
BanII	GRGCYC	2 cut(s)	2050, 2288
BarI	GAAGNNNNNNTAC	2 cut(s)	392, 424
BauI	CACGAG	1 cut(s)	1748
Bbv12I	GWGCWC	2 cut(s)	2050, 2288
BbvCI	CCTCAGC	1 cut(s)	1853
BbvI	GCAGC	4 cut(s)	604, 1004, 1972, 2143
BceAI	ACGGC	2 cut(s)	966, 2153
BciT130I	CCWGG	4 cut(s)	366, 650, 1458, 2334
BciVI	GTATCC	1 cut(s)	1192
BclI	TGATCA	2 cut(s)	1269, 2107
BcoDI	GTCTC	9 cut(s)	81, 192, 473, 881, 1736, 1828, 1898, 2130, 2221
BfaI	CTAG	5 cut(s)	282, 1575, 1728, 1989, 2240
BfoI	RGCGCY	2 cut(s)	566, 1860
BfuI	GTATCC	1 cut(s)	1192
BglII	AGATCT	1 cut(s)	2465
BisI	GCNGC	5 cut(s)	561, 593, 993, 1986, 2157
BlpI	GCTNAGC	1 cut(s)	2282
BlsI	GCNGC	5 cut(s)	562, 594, 994, 1987, 2158
Bme1390I	CCNGG	4 cut(s)	366, 650, 1458, 2334
Bme18I	GGWCC	3 cut(s)	467, 1904, 2249
BmeT110I	CYCGRG	3 cut(s)	703, 1535, 2224
BmgT120I	GGNCC	3 cut(s)	467, 1904, 2249
BmiI	GGNNCC	3 cut(s)	468, 2331, 2454
BmrFI	CCNGG	4 cut(s)	366, 650, 1458, 2334
BmsI	GCATC	7 cut(s)	547, 809, 979, 1374, 1594, 1802, 2409
BmtI	GCTAGC	1 cut(s)	1578
BplI	GAGNNNNNCTC	2 cut(s)	2145, 2177
BpmI	CTGGAG	3 cut(s)	482, 797, 1760
Bpu10I	CCTNAGC	4 cut(s)	1463, 1634, 1853, 2457
Bpu1102I	GCTNAGC	1 cut(s)	2282
BpuEI	CTTGAG	2 cut(s)	792, 2344
BsaBI	GATNNNNATC	2 cut(s)	1595, 1847
BsaI	GGTCTC	4 cut(s)	192, 881, 1898, 2130
BsaJI	CCNNGG	6 cut(s)	7, 365, 596, 649, 1954, 2169
BsaWI	WCCGGW	1 cut(s)	469
BsaXI	ACNNNNNCTCC	8 cut(s)	238, 268, 290, 320, 470, 500, 2328, 2358
Bsc4I	CCNNNNNNNGG	5 cut(s)	385, 655, 886, 1253, 2449
Bse118I	RCCGGY	1 cut(s)	116
Bse1I	ACTGG	3 cut(s)	499, 780, 1925
Bse3DI	GCAATG	4 cut(s)	1317, 1422, 1554, 2115
Bse8I	GATNNNNATC	2 cut(s)	1595, 1847
BseBI	CCWGG	4 cut(s)	366, 650, 1458, 2334
BseDI	CCNNGG	6 cut(s)	7, 365, 596, 649, 1954, 2169
BseGI	GGATG	6 cut(s)	135, 619, 824, 940, 1225, 1358
BseJI	GATNNNNATC	2 cut(s)	1595, 1847
BseLI	CCNNNNNNNGG	5 cut(s)	385, 655, 886, 1253, 2449
BseMI	GCAATG	4 cut(s)	1317, 1422, 1554, 2115
BseMII	CTCAG	8 cut(s)	63, 497, 557, 759, 1454, 1867, 2273, 2448
BseNI	ACTGG	3 cut(s)	499, 780, 1925
BseRI	GAGGAG	2 cut(s)	311, 701
BseSI	GKGCMC	1 cut(s)	2332
BseX3I	CGGCCG	1 cut(s)	979
BseXI	GCAGC	4 cut(s)	604, 1004, 1972, 2143
BseYI	CCCAGC	3 cut(s)	1340, 1445, 1520
Bsh1236I	CGCG	1 cut(s)	20
Bsh1285I	CGRYCG	2 cut(s)	982, 2370
BshFI	GGCC	9 cut(s)	971, 981, 1134, 1141, 1246, 1456, 1461, 1496, 1732
BshNI	GGYRCC	1 cut(s)	2329
BsiEI	CGRYCG	2 cut(s)	982, 2370
BsiHKAI	GWGCWC	2 cut(s)	2050, 2288
BsiHKCI	CYCGRG	3 cut(s)	703, 1535, 2224
BsiSI	CCGG	3 cut(s)	117, 470, 978
BsiWI	CGTACG	1 cut(s)	2070
BslFI	GGGAC	3 cut(s)	162, 480, 2207
BslI	CCNNNNNNNGG	5 cut(s)	385, 655, 886, 1253, 2449
BsmAI	GTCTC	9 cut(s)	81, 192, 473, 881, 1736, 1828, 1898, 2130, 2221
BsmBI	CGTCTC	1 cut(s)	2221
BsmFI	GGGAC	3 cut(s)	162, 480, 2207
BsmI	GAATGC	3 cut(s)	421, 1753, 2208
BsnI	GGCC	9 cut(s)	971, 981, 1134, 1141, 1246, 1456, 1461, 1496, 1732
Bso31I	GGTCTC	4 cut(s)	192, 881, 1898, 2130
BsoBI	CYCGRG	3 cut(s)	703, 1535, 2224
Bsp1286I	GDGCHC	3 cut(s)	2050, 2288, 2332
Bsp1407I	TGTACA	1 cut(s)	1260
Bsp1720I	GCTNAGC	1 cut(s)	2282
BspACI	CCGC	2 cut(s)	18, 560
BspANI	GGCC	9 cut(s)	971, 981, 1134, 1141, 1246, 1456, 1461, 1496, 1732
BspCNI	CTCAG	8 cut(s)	64, 496, 558, 760, 1455, 1866, 2274, 2449
BspFNI	CGCG	1 cut(s)	20
BspLI	GGNNCC	3 cut(s)	468, 2331, 2454
BspOI	GCTAGC	1 cut(s)	1578
BspPI	GGATC	4 cut(s)	1402, 1623, 1664, 2389
BspT107I	GGYRCC	1 cut(s)	2329
BspTNI	GGTCTC	4 cut(s)	192, 881, 1898, 2130
BsrDI	GCAATG	4 cut(s)	1317, 1422, 1554, 2115
BsrFI	RCCGGY	1 cut(s)	116
BsrGI	TGTACA	1 cut(s)	1260
BsrI	ACTGG	3 cut(s)	499, 780, 1925
BssAI	RCCGGY	1 cut(s)	116
BssECI	CCNNGG	6 cut(s)	7, 365, 596, 649, 1954, 2169
BssSI	CACGAG	1 cut(s)	1748
BssT1I	CCWWGG	2 cut(s)	596, 1954
Bst2BI	CACGAG	1 cut(s)	1748
Bst2UI	CCWGG	4 cut(s)	366, 650, 1458, 2334
Bst4CI	ACNGT	6 cut(s)	160, 338, 716, 1318, 2379, 2406
Bst6I	CTCTTC	2 cut(s)	1485, 1901
BstAUI	TGTACA	1 cut(s)	1260
BstC8I	GCNNGC	2 cut(s)	1389, 1576
BstDSI	CCRYGG	2 cut(s)	7, 2169
BstF5I	GGATG	6 cut(s)	135, 619, 824, 940, 1225, 1358
BstFNI	CGCG	1 cut(s)	20
BstH2I	RGCGCY	2 cut(s)	566, 1860
BstHHI	GCGC	4 cut(s)	565, 1574, 1859, 2161
BstMAI	GTCTC	9 cut(s)	81, 192, 473, 881, 1736, 1828, 1898, 2130, 2221
BstMCI	CGRYCG	2 cut(s)	982, 2370
BstMWI	GCNNNNNNNGC	2 cut(s)	1009, 2165
BstNI	CCWGG	4 cut(s)	366, 650, 1458, 2334
BstNSI	RCATGY	1 cut(s)	1391
BstSCI	CCNGG	4 cut(s)	364, 648, 1456, 2332
BstSLI	GKGCMC	1 cut(s)	2332
BstUI	CGCG	1 cut(s)	20
BstV1I	GCAGC	4 cut(s)	604, 1004, 1972, 2143
BstX2I	RGATCY	4 cut(s)	1394, 1615, 2394, 2465
BstYI	RGATCY	4 cut(s)	1394, 1615, 2394, 2465
BstZI	CGGCCG	1 cut(s)	979
BsuI	GTATCC	1 cut(s)	1192
BsuRI	GGCC	9 cut(s)	971, 981, 1134, 1141, 1246, 1456, 1461, 1496, 1732
BtgI	CCRYGG	2 cut(s)	7, 2169
BtgZI	GCGATG	1 cut(s)	1593
BtsCI	GGATG	6 cut(s)	135, 619, 824, 940, 1225, 1358
BtsIMutI	CAGTG	2 cut(s)	156, 343
Cac8I	GCNNGC	2 cut(s)	1389, 1576
CfoI	GCGC	4 cut(s)	565, 1574, 1859, 2161
Cfr10I	RCCGGY	1 cut(s)	116
Cfr13I	GGNCC	3 cut(s)	467, 1904, 2249
Csp6I	GTAC	5 cut(s)	191, 329, 1261, 1993, 2071
CviQI	GTAC	5 cut(s)	191, 329, 1261, 1993, 2071
EaeI	YGGCCR	4 cut(s)	969, 979, 1132, 1494
EagI	CGGCCG	1 cut(s)	979
Eam1104I	CTCTTC	2 cut(s)	1485, 1901
EarI	CTCTTC	2 cut(s)	1485, 1901
Ecl136II	GAGCTC	2 cut(s)	2048, 2286
EclXI	CGGCCG	1 cut(s)	979
Eco130I	CCWWGG	2 cut(s)	596, 1954
Eco147I	AGGCCT	2 cut(s)	1456, 1732
Eco24I	GRGCYC	2 cut(s)	2050, 2288
Eco31I	GGTCTC	4 cut(s)	192, 881, 1898, 2130
Eco47I	GGWCC	3 cut(s)	467, 1904, 2249
Eco47III	AGCGCT	1 cut(s)	1858
Eco52I	CGGCCG	1 cut(s)	979
Eco53kI	GAGCTC	2 cut(s)	2048, 2286
Eco57I	CTGAAG	1 cut(s)	1635
Eco88I	CYCGRG	3 cut(s)	703, 1535, 2224
EcoICRI	GAGCTC	2 cut(s)	2048, 2286
EcoRII	CCWGG	4 cut(s)	364, 648, 1456, 2332
EcoT14I	CCWWGG	2 cut(s)	596, 1954
EcoT22I	ATGCAT	3 cut(s)	1389, 1703, 2424
EcoT38I	GRGCYC	2 cut(s)	2050, 2288
ErhI	CCWWGG	2 cut(s)	596, 1954
Esp3I	CGTCTC	1 cut(s)	2221
FaqI	GGGAC	3 cut(s)	162, 480, 2207
FauNDI	CATATG	1 cut(s)	1177
FbaI	TGATCA	2 cut(s)	1269, 2107
FblI	GTMKAC	1 cut(s)	1407
Fnu4HI	GCNGC	5 cut(s)	561, 593, 993, 1986, 2157
FokI	GGATG	6 cut(s)	122, 626, 831, 947, 1232, 1345
FriOI	GRGCYC	2 cut(s)	2050, 2288
Fsp4HI	GCNGC	5 cut(s)	561, 593, 993, 1986, 2157
FspBI	CTAG	5 cut(s)	282, 1575, 1728, 1989, 2240
GlaI	GCGC	4 cut(s)	564, 1573, 1858, 2160
GluI	GCNGC	5 cut(s)	561, 593, 993, 1986, 2157
GsaI	CCCAGC	3 cut(s)	1344, 1449, 1524
GsuI	CTGGAG	3 cut(s)	482, 797, 1760
HaeII	RGCGCY	2 cut(s)	566, 1860
HaeIII	GGCC	9 cut(s)	971, 981, 1134, 1141, 1246, 1456, 1461, 1496, 1732
HapII	CCGG	3 cut(s)	117, 470, 978
HhaI	GCGC	4 cut(s)	565, 1574, 1859, 2161
Hin6I	GCGC	4 cut(s)	563, 1572, 1857, 2159
HinP1I	GCGC	4 cut(s)	563, 1572, 1857, 2159
HincII	GTYRAC	2 cut(s)	942, 1771
HindII	GTYRAC	2 cut(s)	942, 1771
HindIII	AAGCTT	4 cut(s)	964, 1001, 1039, 1298
HpaII	CCGG	3 cut(s)	117, 470, 978
HphI	GGTGA	3 cut(s)	728, 2356, 2466
Hpy166II	GTNNAC	7 cut(s)	329, 942, 1111, 1263, 1408, 1771, 2176
Hpy8I	GTNNAC	7 cut(s)	329, 942, 1111, 1263, 1408, 1771, 2176
HpyAV	CCTTC	5 cut(s)	618, 648, 1099, 1973, 2018
HpyCH4III	ACNGT	6 cut(s)	160, 338, 716, 1318, 2379, 2406
HpyCH4IV	ACGT	3 cut(s)	1934, 2230, 2433
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1009, 2165
HpySE526I	ACGT	3 cut(s)	1934, 2230, 2433
HspAI	GCGC	4 cut(s)	563, 1572, 1857, 2159
Ksp22I	TGATCA	2 cut(s)	1269, 2107
LmnI	GCTCC	3 cut(s)	1982, 2153, 2458
Lsp1109I	GCAGC	4 cut(s)	604, 1004, 1972, 2143
LweI	GCATC	7 cut(s)	547, 809, 979, 1374, 1594, 1802, 2409
MaeI	CTAG	5 cut(s)	282, 1575, 1728, 1989, 2240
MaeII	ACGT	3 cut(s)	1934, 2230, 2433
MaeIII	GTNAC	3 cut(s)	710, 2242, 2472
MfeI	CAATTG	1 cut(s)	1838
MflI	RGATCY	4 cut(s)	1394, 1615, 2394, 2465
MhlI	GDGCHC	3 cut(s)	2050, 2288, 2332
MlsI	TGGCCA	3 cut(s)	971, 1134, 1496
MluCI	AATT	8 cut(s)	27, 110, 205, 825, 957, 1669, 1838, 2268
MluNI	TGGCCA	3 cut(s)	971, 1134, 1496
MlyI	GAGTC	9 cut(s)	83, 103, 326, 475, 577, 695, 821, 1403, 2303
MmeI	TCCRAC	6 cut(s)	193, 212, 456, 912, 1057, 2131
Mox20I	TGGCCA	3 cut(s)	971, 1134, 1496
Mph1103I	ATGCAT	3 cut(s)	1389, 1703, 2424
MroXI	GAANNNNTTC	2 cut(s)	447, 2504
MscI	TGGCCA	3 cut(s)	971, 1134, 1496
MseI	TTAA	3 cut(s)	546, 729, 1451
MslI	CAYNNNNRTG	4 cut(s)	1100, 1118, 1369, 2168
Msp20I	TGGCCA	3 cut(s)	971, 1134, 1496
MspI	CCGG	3 cut(s)	117, 470, 978
MspR9I	CCNGG	4 cut(s)	366, 650, 1458, 2334
MunI	CAATTG	1 cut(s)	1838
Mva1269I	GAATGC	3 cut(s)	421, 1753, 2208
MvaI	CCWGG	4 cut(s)	366, 650, 1458, 2334
MvnI	CGCG	1 cut(s)	20
MwoI	GCNNNNNNNGC	2 cut(s)	1009, 2165
NdeI	CATATG	1 cut(s)	1177
NheI	GCTAGC	1 cut(s)	1574
NlaIV	GGNNCC	3 cut(s)	468, 2331, 2454
NmeAIII	GCCGAG	1 cut(s)	2429
NmuCI	GTSAC	3 cut(s)	710, 2242, 2472
NsiI	ATGCAT	3 cut(s)	1389, 1703, 2424
NspI	RCATGY	1 cut(s)	1391
PaeI	GCATGC	1 cut(s)	1391
PaeR7I	CTCGAG	2 cut(s)	703, 1535
PceI	AGGCCT	2 cut(s)	1456, 1732
PctI	GAATGC	3 cut(s)	421, 1753, 2208
PdmI	GAANNNNTTC	2 cut(s)	447, 2504
PfeI	GAWTC	9 cut(s)	278, 670, 748, 1067, 1172, 1277, 1694, 1721, 1792
Pfl23II	CGTACG	1 cut(s)	2070
PflMI	CCANNNNNTGG	2 cut(s)	385, 1253
PkrI	GCNGC	5 cut(s)	562, 594, 994, 1987, 2158
Ple19I	CGATCG	1 cut(s)	2370
PleI	GAGTC	9 cut(s)	82, 102, 325, 475, 576, 695, 820, 1403, 2302
PpsI	GAGTC	9 cut(s)	82, 102, 325, 475, 576, 695, 820, 1403, 2302
Psp124BI	GAGCTC	2 cut(s)	2050, 2288
Psp1406I	AACGTT	1 cut(s)	1934
Psp6I	CCWGG	4 cut(s)	364, 648, 1456, 2332
PspFI	CCCAGC	3 cut(s)	1340, 1445, 1520
PspGI	CCWGG	4 cut(s)	364, 648, 1456, 2332
PspLI	CGTACG	1 cut(s)	2070
PspN4I	GGNNCC	3 cut(s)	468, 2331, 2454
PspPI	GGNCC	3 cut(s)	467, 1904, 2249
PspXI	VCTCGAGB	1 cut(s)	703
PsuI	RGATCY	4 cut(s)	1394, 1615, 2394, 2465
PvuI	CGATCG	1 cut(s)	2370
RsaI	GTAC	5 cut(s)	192, 330, 1262, 1994, 2072
RsaNI	GTAC	5 cut(s)	191, 329, 1261, 1993, 2071
RseI	CAYNNNNRTG	4 cut(s)	1100, 1118, 1369, 2168
SacI	GAGCTC	2 cut(s)	2050, 2288
SaqAI	TTAA	3 cut(s)	546, 729, 1451
SatI	GCNGC	5 cut(s)	561, 593, 993, 1986, 2157
Sau96I	GGNCC	3 cut(s)	467, 1904, 2249
SchI	GAGTC	9 cut(s)	83, 103, 326, 475, 577, 695, 821, 1403, 2303
ScrFI	CCNGG	4 cut(s)	366, 650, 1458, 2334
SduI	GDGCHC	3 cut(s)	2050, 2288, 2332
SfaNI	GCATC	7 cut(s)	547, 809, 979, 1374, 1594, 1802, 2409
Sfr274I	CTCGAG	2 cut(s)	703, 1535
SinI	GGWCC	3 cut(s)	467, 1904, 2249
SlaI	CTCGAG	2 cut(s)	703, 1535
SmiMI	CAYNNNNRTG	4 cut(s)	1100, 1118, 1369, 2168
SmlI	CTYRAG	4 cut(s)	703, 807, 1535, 2323
SmoI	CTYRAG	4 cut(s)	703, 807, 1535, 2323
SphI	GCATGC	1 cut(s)	1391
Sse9I	AATT	8 cut(s)	27, 110, 205, 825, 957, 1669, 1838, 2268
SseBI	AGGCCT	2 cut(s)	1456, 1732
SsiI	CCGC	2 cut(s)	18, 560
SspMI	CTAG	5 cut(s)	282, 1575, 1728, 1989, 2240
SstI	GAGCTC	2 cut(s)	2050, 2288
StuI	AGGCCT	2 cut(s)	1456, 1732
StyD4I	CCNGG	4 cut(s)	364, 648, 1456, 2332
StyI	CCWWGG	2 cut(s)	596, 1954
TaaI	ACNGT	6 cut(s)	160, 338, 716, 1318, 2379, 2406
TaiI	ACGT	3 cut(s)	1937, 2233, 2436
TaqII	GACCGA	1 cut(s)	2266
TasI	AATT	8 cut(s)	27, 110, 205, 825, 957, 1669, 1838, 2268
TatI	WGTACW	2 cut(s)	328, 1260
TauI	GCSGC	1 cut(s)	563
TfiI	GAWTC	9 cut(s)	278, 670, 748, 1067, 1172, 1277, 1694, 1721, 1792
Tru1I	TTAA	3 cut(s)	546, 729, 1451
Tru9I	TTAA	3 cut(s)	546, 729, 1451
TscAI	CASTG	2 cut(s)	163, 343
TseFI	GTSAC	3 cut(s)	710, 2242, 2472
TseI	GCWGC	4 cut(s)	592, 992, 1985, 2156
Tsp45I	GTSAC	3 cut(s)	710, 2242, 2472
TspGWI	ACGGA	2 cut(s)	1549, 2229
TspRI	CASTG	2 cut(s)	163, 343
Van91I	CCANNNNNTGG	2 cut(s)	385, 1253
VpaK11BI	GGWCC	3 cut(s)	467, 1904, 2249
XceI	RCATGY	1 cut(s)	1391
XcmI	CCANNNNNNNNNTGG	1 cut(s)	386
XhoI	CTCGAG	2 cut(s)	703, 1535
XmiI	GTMKAC	1 cut(s)	1407
XmnI	GAANNNNTTC	2 cut(s)	447, 2504
XspI	CTAG	5 cut(s)	282, 1575, 1728, 1989, 2240
Zsp2I	ATGCAT	3 cut(s)	1389, 1703, 2424

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.