AT1G79720

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0016619
Physical Location & Seq
Reverse (-)
29997127 .. 29999045
1919 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G79720.1

Sequence Viewer

Length: 1455 bp
ATGTTCAAGAAAGCAACATTGAATCTTTCACTTGCTCCTTTGCTACTTGTTTTTCTTTTCCTTCTCTCGTGTGTTGTTCATGGCGTCGATGAGAAGAAGATTCTCAGTGTACATAACAACATCTGGTCTCCCAAGAAATCATACGAAGCTTCAACTTCATGTTTTTCTCGCAGTCTTGGAAAAGGAAGAGAATCCACTACATTGGAGATGAAACATAGAGAACTTTGCTCAGGAAAGACTATAGATTTGGGTAAGAAGATGAGAAGAGCCTTAGTTTTGGATAACATTCGAGTTCAGTCACTTCAACTCAAAATCAAAGCAATGACCTCAAGCACCACTGAACAATCTGTTTCCGAAACTCAGATTCCGTTAACCTCAGGGATAAAACTTGAGTCTTTGAACTACATCGTTACAGTTGAATTAGGAGGGAAAAACATGAGTTTGATCGTTGACACTGGAAGTGACCTGACTTGGGTCCAATGCCAGCCTTGCAGATCCTGTTACAACCAACAAGGTCCTTTGTATGACCCATCAGTCTCATCTTCTTACAAGACGGTGTTCTGTAACTCATCCACTTGTCAGGACCTTGTGGCAGCTACCAGCAATTCCGGCCCTTGTGGAGGTAACAATGGTGTTGTAAAGACACCTTGTGAGTACGTTGTCAGCTATGGAGATGGATCATACACTCGAGGAGACTTGGCAAGTGAAAGCATCCTATTGGGCGACACAAAACTTGAAAACTTTGTCTTTGGTTGTGGCCGAAACAACAAAGGTCTGTTTGGGGGATCCTCTGGTTTAATGGGTTTGGGAAGAAGTTCAGTCTCTTTAGTCTCCCAAACTTTGAAAACTTTCAACGGAGTTTTCTCATACTGTTTACCTTCTCTTGAGGATGGAGCTTCTGGCTCATTGTCCTTTGGTAACGATTCCTCTGTTTACACGAATTCAACTTCAGTTTCCTACACGCCGTTAGTACAAAACCCTCAGCTTCGTTCCTTTTACATTCTGAATCTCACTGGTGCTAGCATTGGTGGCGTGGAACTGAAATCTTCAAGCTTTGGCAGAGGGATTCTAATCGATTCAGGAACGGTTATCACAAGATTGCCACCTTCCATTTACAAAGCTGTGAAGATAGAGTTTCTGAAACAGTTTTCCGGGTTTCCTACTGCTCCTGGTTATTCAATCTTAGACACTTGCTTTAACCTCACAAGTTATGAAGACATAAGCATTCCCATTATCAAAATGATCTTCCAAGGTAACGCTGAGCTCGAAGTGGATGTCACTGGTGTGTTCTACTTTGTCAAGCCTGACGCATCTCTAGTCTGCTTGGCCTTAGCAAGTCTGTCATATGAAAATGAAGTCGGGATCATCGGAAATTATCAGCAGAAAAACCAGAGAGTAATATATGATACCACACAAGAGAGGCTAGGAATTGTCGGAGAAAACTGCAGAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

484

Amino Acids

52.4

Weight (kDa)

8.07

Isoelectric Point (pI)

32.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 135 - 307 9.1e-49 Xylanase inhibitor N-terminal
Asp PF00026 219 - 477 2e-15 Eukaryotic aspartyl protease
TAXi_C PF14541 333 - 476 6.5e-24 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016619)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G79720
fragaria_vesca FvH4_6g28220
malus_domestica MD09G1228000.v1.1
prunus_persica Prupe.3G103900_v2.0.a1
pyrus_communis pycom09g14720
rosa_chinensis RchiOBHm_Chr2g0132281
rosa_laevigata RLG00000019243
rosa_roxburghii Rroxscaffold_2G00112200
rosa_rugosa Rorug02G0303400
rosa_samantha Rh2AG356400 Rh2BG362800 Rh2CG339900 Rh2DG379700
rosa_wichuraiana Rw2G028980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 533
AclWI GGATC 5 cut(s) 489, 685, 780, 793, 1370
AcoI YGGCCR 1 cut(s) 757
AcsI RAATTY 1 cut(s) 940
AcuI CTGAAG 1 cut(s) 933
AcyI GRCGYC 1 cut(s) 84
AdeI CACNNNGTG 1 cut(s) 650
AfaI GTAC 3 cut(s) 111, 656, 972
AfiI CCNNNNNNNGG 2 cut(s) 472, 620
AjnI CCWGG 1 cut(s) 1168
AleI CACNNNNGTG 1 cut(s) 1283
AluBI AGCT 8 cut(s) 149, 596, 666, 896, 985, 1053, 1121, 1264
AluI AGCT 8 cut(s) 149, 596, 666, 896, 985, 1053, 1121, 1264
Alw21I GWGCWC 1 cut(s) 1266
Alw26I GTCTC 5 cut(s) 132, 541, 687, 826, 835
AlwI GGATC 5 cut(s) 489, 685, 780, 793, 1370
AlwNI CAGNNNCTG 2 cut(s) 498, 1452
Ama87I CYCGRG 1 cut(s) 687
AoxI GGCC 3 cut(s) 610, 757, 1326
ApeKI GCWGC 1 cut(s) 593
ApoI RAATTY 1 cut(s) 940
ArsI GACNNNNNNTTYG 4 cut(s) 229, 261, 1260, 1292
Asp700I GAANNNNTTC 2 cut(s) 814, 848
AspS9I GGNCC 4 cut(s) 475, 515, 583, 611
AsuC2I CCSGG 1 cut(s) 1153
AsuNHI GCTAGC 1 cut(s) 1019
AvaI CYCGRG 1 cut(s) 687
AvaII GGWCC 3 cut(s) 475, 515, 583
AxyI CCTNAGG 1 cut(s) 376
BamHI GGATCC 1 cut(s) 785
BanII GRGCYC 1 cut(s) 1266
BauI CACGAG 1 cut(s) 67
BbsI GAAGAC 1 cut(s) 1221
Bbv12I GWGCWC 1 cut(s) 1266
BbvCI CCTCAGC 1 cut(s) 981
BbvI GCAGC 1 cut(s) 605
BccI CCATC 3 cut(s) 538, 668, 884
BceAI ACGGC 1 cut(s) 949
BciT130I CCWGG 1 cut(s) 1170
BcnI CCSGG 1 cut(s) 1153
BcoDI GTCTC 5 cut(s) 132, 541, 687, 826, 835
BfaI CTAG 3 cut(s) 1020, 1316, 1424
BfmI CTRYAG 2 cut(s) 240, 1444
BisI GCNGC 1 cut(s) 594
BlpI GCTNAGC 1 cut(s) 1260
BlsI GCNGC 1 cut(s) 595
Bme1390I CCNGG 2 cut(s) 1153, 1170
Bme18I GGWCC 3 cut(s) 475, 515, 583
BmeT110I CYCGRG 1 cut(s) 687
BmgT120I GGNCC 4 cut(s) 475, 515, 583, 611
BmiI GGNNCC 2 cut(s) 476, 787
BmrFI CCNGG 2 cut(s) 1153, 1170
BmsI GCATC 2 cut(s) 720, 1319
BmtI GCTAGC 1 cut(s) 1023
BoxI GACNNNNGTC 1 cut(s) 473
BpiI GAAGAC 1 cut(s) 1221
Bpu10I CCTNAGC 3 cut(s) 229, 981, 1330
Bpu1102I GCTNAGC 1 cut(s) 1260
BpuEI CTTGAG 3 cut(s) 313, 410, 905
BpuMI CCSGG 1 cut(s) 1153
Bsa29I ATCGAT 1 cut(s) 1074
BsaBI GATNNNNATC 1 cut(s) 1070
BsaHI GRCGYC 1 cut(s) 84
BsaI GGTCTC 1 cut(s) 132
BsaJI CCNNGG 1 cut(s) 1249
Bsc4I CCNNNNNNNGG 2 cut(s) 472, 620
Bse1I ACTGG 3 cut(s) 460, 1018, 1285
Bse21I CCTNAGG 1 cut(s) 376
Bse3DI GCAATG 1 cut(s) 327
Bse8I GATNNNNATC 1 cut(s) 1070
BseBI CCWGG 1 cut(s) 1170
BseCI ATCGAT 1 cut(s) 1074
BseDI CCNNGG 1 cut(s) 1249
BseGI GGATG 4 cut(s) 569, 711, 895, 1279
BseJI GATNNNNATC 1 cut(s) 1070
BseLI CCNNNNNNNGG 2 cut(s) 472, 620
BseMI GCAATG 1 cut(s) 327
BseMII CTCAG 6 cut(s) 118, 243, 374, 390, 995, 1251
BseNI ACTGG 3 cut(s) 460, 1018, 1285
BseRI GAGGAG 1 cut(s) 705
BseXI GCAGC 1 cut(s) 605
BshFI GGCC 3 cut(s) 612, 759, 1328
BshVI ATCGAT 1 cut(s) 1074
BsiHKAI GWGCWC 1 cut(s) 1266
BsiHKCI CYCGRG 1 cut(s) 687
BsiSI CCGG 2 cut(s) 609, 1152
BslI CCNNNNNNNGG 2 cut(s) 472, 620
BsmAI GTCTC 5 cut(s) 132, 541, 687, 826, 835
BsmI GAATGC 1 cut(s) 1224
BsnI GGCC 3 cut(s) 612, 759, 1328
Bso31I GGTCTC 1 cut(s) 132
BsoBI CYCGRG 1 cut(s) 687
Bsp1286I GDGCHC 1 cut(s) 1266
Bsp1407I TGTACA 1 cut(s) 109
Bsp143I GATC 6 cut(s) 444, 494, 677, 785, 1242, 1362
Bsp1720I GCTNAGC 1 cut(s) 1260
BspANI GGCC 3 cut(s) 612, 759, 1328
BspCNI CTCAG 6 cut(s) 117, 242, 373, 389, 994, 1252
BspDI ATCGAT 1 cut(s) 1074
BspLI GGNNCC 2 cut(s) 476, 787
BspMAI CTGCAG 1 cut(s) 1448
BspOI GCTAGC 1 cut(s) 1023
BspPI GGATC 5 cut(s) 489, 685, 780, 793, 1370
BspQI GCTCTTC 1 cut(s) 259
BspTNI GGTCTC 1 cut(s) 132
BsrDI GCAATG 1 cut(s) 327
BsrGI TGTACA 1 cut(s) 109
BsrI ACTGG 3 cut(s) 460, 1018, 1285
BssECI CCNNGG 1 cut(s) 1249
BssMI GATC 6 cut(s) 444, 494, 677, 785, 1242, 1362
BssNI GRCGYC 1 cut(s) 84
BssSI CACGAG 1 cut(s) 67
BssT1I CCWWGG 1 cut(s) 1249
Bst2BI CACGAG 1 cut(s) 67
Bst2UI CCWGG 1 cut(s) 1170
Bst4CI ACNGT 5 cut(s) 415, 556, 872, 1087, 1146
Bst6I CTCTTC 2 cut(s) 181, 259
BstACI GRCGYC 1 cut(s) 84
BstAUI TGTACA 1 cut(s) 109
BstC8I GCNNGC 2 cut(s) 485, 1021
BstDEI CTNAG 9 cut(s) 104, 229, 271, 360, 376, 981, 1183, 1260, 1330
BstENI CCTNNNNNAGG 1 cut(s) 618
BstF5I GGATG 4 cut(s) 569, 711, 895, 1279
BstKTI GATC 6 cut(s) 447, 497, 680, 788, 1245, 1365
BstMAI GTCTC 5 cut(s) 132, 541, 687, 826, 835
BstMBI GATC 6 cut(s) 444, 494, 677, 785, 1242, 1362
BstMWI GCNNNNNNNGC 3 cut(s) 489, 609, 1029
BstNI CCWGG 1 cut(s) 1170
BstPAI GACNNNNGTC 1 cut(s) 473
BstSCI CCNGG 2 cut(s) 1151, 1168
BstSFI CTRYAG 2 cut(s) 240, 1444
BstV1I GCAGC 1 cut(s) 605
BstV2I GAAGAC 1 cut(s) 1221
BstX2I RGATCY 2 cut(s) 494, 785
BstXI CCANNNNNNTGG 1 cut(s) 202
BstYI RGATCY 2 cut(s) 494, 785
Bsu15I ATCGAT 1 cut(s) 1074
Bsu36I CCTNAGG 1 cut(s) 376
BsuRI GGCC 3 cut(s) 612, 759, 1328
BsuTUI ATCGAT 1 cut(s) 1074
BtsCI GGATG 4 cut(s) 569, 711, 895, 1279
BtsIMutI CAGTG 5 cut(s) 112, 336, 453, 1011, 1278
Cac8I GCNNGC 2 cut(s) 485, 1021
CaiI CAGNNNCTG 2 cut(s) 498, 1452
Cfr13I GGNCC 4 cut(s) 475, 515, 583, 611
ClaI ATCGAT 1 cut(s) 1074
CseI GACGC 2 cut(s) 73, 1316
Csp6I GTAC 3 cut(s) 110, 655, 971
CviAII CATG 3 cut(s) 80, 159, 436
CviQI GTAC 3 cut(s) 110, 655, 971
DdeI CTNAG 9 cut(s) 104, 229, 271, 360, 376, 981, 1183, 1260, 1330
DpnI GATC 6 cut(s) 446, 496, 679, 787, 1244, 1364
DpnII GATC 6 cut(s) 444, 494, 677, 785, 1242, 1362
DraIII CACNNNGTG 1 cut(s) 650
DrdI GACNNNNNNGTC 1 cut(s) 533
DseDI GACNNNNNNGTC 1 cut(s) 533
EaeI YGGCCR 1 cut(s) 757
Eam1104I CTCTTC 2 cut(s) 181, 259
EarI CTCTTC 2 cut(s) 181, 259
Ecl136II GAGCTC 1 cut(s) 1264
Eco130I CCWWGG 1 cut(s) 1249
Eco24I GRGCYC 1 cut(s) 1266
Eco31I GGTCTC 1 cut(s) 132
Eco47I GGWCC 3 cut(s) 475, 515, 583
Eco53kI GAGCTC 1 cut(s) 1264
Eco57I CTGAAG 1 cut(s) 933
Eco81I CCTNAGG 1 cut(s) 376
Eco88I CYCGRG 1 cut(s) 687
EcoICRI GAGCTC 1 cut(s) 1264
EcoNI CCTNNNNNAGG 1 cut(s) 618
EcoO109I RGGNCCY 2 cut(s) 515, 583
EcoRI GAATTC 1 cut(s) 940
EcoRII CCWGG 1 cut(s) 1168
EcoT14I CCWWGG 1 cut(s) 1249
EcoT38I GRGCYC 1 cut(s) 1266
ErhI CCWWGG 1 cut(s) 1249
FaeI CATG 3 cut(s) 83, 162, 439
FatI CATG 3 cut(s) 79, 158, 435
FauNDI CATATG 1 cut(s) 1345
Fnu4HI GCNGC 1 cut(s) 594
FokI GGATG 4 cut(s) 556, 698, 902, 1286
FriOI GRGCYC 1 cut(s) 1266
Fsp4HI GCNGC 1 cut(s) 594
FspBI CTAG 3 cut(s) 1020, 1316, 1424
GluI GCNGC 1 cut(s) 594
HaeIII GGCC 3 cut(s) 612, 759, 1328
HapII CCGG 2 cut(s) 609, 1152
HgaI GACGC 2 cut(s) 73, 1316
Hin1I GRCGYC 1 cut(s) 84
Hin1II CATG 3 cut(s) 83, 162, 439
HincII GTYRAC 2 cut(s) 372, 451
HindII GTYRAC 2 cut(s) 372, 451
HindIII AAGCTT 2 cut(s) 147, 1051
HpaI GTTAAC 1 cut(s) 372
HpaII CCGG 2 cut(s) 609, 1152
Hpy166II GTNNAC 5 cut(s) 110, 372, 451, 875, 934
Hpy188I TCNGA 7 cut(s) 355, 363, 1005, 1140, 1370, 1436, 1454
Hpy188III TCNNGA 6 cut(s) 7, 231, 581, 884, 1080, 1360
Hpy8I GTNNAC 5 cut(s) 110, 372, 451, 875, 934
Hpy99I CGWCG 1 cut(s) 89
HpyAV CCTTC 3 cut(s) 71, 888, 1116
HpyCH4III ACNGT 5 cut(s) 415, 556, 872, 1087, 1146
HpyCH4IV ACGT 1 cut(s) 657
HpyCH4V TGCA 2 cut(s) 492, 1446
HpyF10VI GCNNNNNNNGC 3 cut(s) 489, 609, 1029
HpyF3I CTNAG 9 cut(s) 104, 229, 271, 360, 376, 981, 1183, 1260, 1330
HpySE526I ACGT 1 cut(s) 657
Hsp92I GRCGYC 1 cut(s) 84
Hsp92II CATG 3 cut(s) 83, 162, 439
KspAI GTTAAC 1 cut(s) 372
Kzo9I GATC 6 cut(s) 444, 494, 677, 785, 1242, 1362
LguI GCTCTTC 1 cut(s) 259
LmnI GCTCC 3 cut(s) 40, 893, 1171
Lsp1109I GCAGC 1 cut(s) 605
LweI GCATC 2 cut(s) 720, 1319
MaeI CTAG 3 cut(s) 1020, 1316, 1424
MaeII ACGT 1 cut(s) 657
MaeIII GTNAC 9 cut(s) 297, 409, 461, 500, 563, 623, 917, 1253, 1276
MalI GATC 6 cut(s) 446, 496, 679, 787, 1244, 1364
MboI GATC 6 cut(s) 444, 494, 677, 785, 1242, 1362
MflI RGATCY 2 cut(s) 494, 785
MhlI GDGCHC 1 cut(s) 1266
MluCI AATT 5 cut(s) 419, 604, 940, 1372, 1428
MlyI GAGTC 1 cut(s) 401
MmeI TCCRAC 1 cut(s) 1414
MroXI GAANNNNTTC 2 cut(s) 814, 848
MseI TTAA 3 cut(s) 371, 797, 1197
MslI CAYNNNNRTG 1 cut(s) 1283
MspI CCGG 2 cut(s) 609, 1152
MspR9I CCNGG 2 cut(s) 1153, 1170
Mva1269I GAATGC 1 cut(s) 1224
MvaI CCWGG 1 cut(s) 1170
MwoI GCNNNNNNNGC 3 cut(s) 489, 609, 1029
NciI CCSGG 1 cut(s) 1153
NdeI CATATG 1 cut(s) 1345
NdeII GATC 6 cut(s) 444, 494, 677, 785, 1242, 1362
NheI GCTAGC 1 cut(s) 1019
NlaIII CATG 3 cut(s) 83, 162, 439
NlaIV GGNNCC 2 cut(s) 476, 787
NmuCI GTSAC 3 cut(s) 297, 461, 1276
OliI CACNNNNGTG 1 cut(s) 1283
PaeR7I CTCGAG 1 cut(s) 687
PciSI GCTCTTC 1 cut(s) 259
PcsI WCGNNNNNNNCGW 1 cut(s) 1263
PctI GAATGC 1 cut(s) 1224
PdmI GAANNNNTTC 2 cut(s) 814, 848
PfeI GAWTC 8 cut(s) 22, 100, 191, 364, 923, 1006, 1066, 1076
PkrI GCNGC 1 cut(s) 595
PleI GAGTC 1 cut(s) 400
PpsI GAGTC 1 cut(s) 400
PpuMI RGGWCCY 2 cut(s) 515, 583
PshAI GACNNNNGTC 1 cut(s) 473
Psp124BI GAGCTC 1 cut(s) 1266
Psp5II RGGWCCY 2 cut(s) 515, 583
Psp6I CCWGG 1 cut(s) 1168
PspGI CCWGG 1 cut(s) 1168
PspN4I GGNNCC 2 cut(s) 476, 787
PspPI GGNCC 4 cut(s) 475, 515, 583, 611
PspPPI RGGWCCY 2 cut(s) 515, 583
PspXI VCTCGAGB 1 cut(s) 687
PstI CTGCAG 1 cut(s) 1448
PstNI CAGNNNCTG 2 cut(s) 498, 1452
PsuI RGATCY 2 cut(s) 494, 785
RsaI GTAC 3 cut(s) 111, 656, 972
RsaNI GTAC 3 cut(s) 110, 655, 971
RseI CAYNNNNRTG 1 cut(s) 1283
SacI GAGCTC 1 cut(s) 1266
SapI GCTCTTC 1 cut(s) 259
SaqAI TTAA 3 cut(s) 371, 797, 1197
SatI GCNGC 1 cut(s) 594
Sau3AI GATC 6 cut(s) 444, 494, 677, 785, 1242, 1362
Sau96I GGNCC 4 cut(s) 475, 515, 583, 611
SchI GAGTC 1 cut(s) 401
ScrFI CCNGG 2 cut(s) 1153, 1170
SduI GDGCHC 1 cut(s) 1266
SfaNI GCATC 2 cut(s) 720, 1319
SfcI CTRYAG 2 cut(s) 240, 1444
Sfr274I CTCGAG 1 cut(s) 687
SinI GGWCC 3 cut(s) 475, 515, 583
SlaI CTCGAG 1 cut(s) 687
SmiMI CAYNNNNRTG 1 cut(s) 1283
SmlI CTYRAG 4 cut(s) 328, 389, 687, 884
SmoI CTYRAG 4 cut(s) 328, 389, 687, 884
Sse9I AATT 5 cut(s) 419, 604, 940, 1372, 1428
SspMI CTAG 3 cut(s) 1020, 1316, 1424
SstI GAGCTC 1 cut(s) 1266
StyD4I CCNGG 2 cut(s) 1151, 1168
StyI CCWWGG 1 cut(s) 1249
TaaI ACNGT 5 cut(s) 415, 556, 872, 1087, 1146
TaiI ACGT 1 cut(s) 660
TaqI TCGA 5 cut(s) 87, 289, 688, 1074, 1266
TasI AATT 5 cut(s) 419, 604, 940, 1372, 1428
TatI WGTACW 2 cut(s) 109, 970
TfiI GAWTC 8 cut(s) 22, 100, 191, 364, 923, 1006, 1066, 1076
Tru1I TTAA 3 cut(s) 371, 797, 1197
Tru9I TTAA 3 cut(s) 371, 797, 1197
TscAI CASTG 5 cut(s) 112, 343, 460, 1018, 1285
TseFI GTSAC 3 cut(s) 297, 461, 1276
TseI GCWGC 1 cut(s) 593
Tsp45I GTSAC 3 cut(s) 297, 461, 1276
TspDTI ATGAA 6 cut(s) 68, 147, 224, 1227, 1362, 1368
TspGWI ACGGA 2 cut(s) 357, 870
TspRI CASTG 5 cut(s) 112, 343, 460, 1018, 1285
VpaK11BI GGWCC 3 cut(s) 475, 515, 583
XagI CCTNNNNNAGG 1 cut(s) 618
XapI RAATTY 1 cut(s) 940
XhoI CTCGAG 1 cut(s) 687
XmnI GAANNNNTTC 2 cut(s) 814, 848
XspI CTAG 3 cut(s) 1020, 1316, 1424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.