Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007044

Physical Location & Seq

Genomic Coordinates Reverse (-)

547107 .. 549669

Gene Structure 2563 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G02148.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGGGAGCTAGGGTTCAAGTACAACATTACAATTTAGGATCATCTGATTCCTACATCGCTACTTCTCTCCACGATCTCAACTCCGTCGATGGTCCGCCGAGAGATATCGACGGTATCGGAGGCGCCGTTGGTCGTGACGGCGATAGTTTAGATAATGACGGCGATTCCTCTTCTGCGGACTGTATGCATGAATCATACAGAAACTCTATGCAAATCGGAGTAGAAGAAGGTGGATCTAACATGGAGAACAAAGGATCTGCTTACATTATGTTAAACATTGAAGATGTTTCACCGATTGAAGCAGCAAGAGGGAGGTTTCTGCAAATCATATTGGACTACTTTATTAGCCAACATGTGATTGAAGTCTGTGAGAGCAAACGTGATCATGATGTGGATTCAGGAGGACGTGATAGTAATAGTAAAGTGAAGAGGAAGTCGGATGATACGCGATATGAAGGTGATCCGAGTTTTGCGTTACCGTTGATGTATATTGCAAATTTGTATGAGACTTTAGTTGGTGAAGCAAATGTGAGGCTTGCTTCATTGAATGGAATAAGGGATAAGACTATTGGAGTAGCTCTTGAAGCTGCTGGTGGCTTGTATAGGAAATTAACTAAGAAGTTTCCTAAGAAAGGTACTTGCATGTACAGGAGAAGAGAACTGGCAACTTCAGTTGAAACAAGGACAAGATTTCCAGAATTGGTAATACATGAAGAGAAACGAGTTCGCTTTGTGGTGGTTAATGGTTTGGATATTGTTGAAAAGCCAAGTGATTTGCCTATTGAAGAAGCTGAATGGTTTAAGCGATTAACAGGCCGTAATGAAGTGGCTATCTCTGCTAGAGATTATAAATTCTACTGCCCTCGACGCAAGCATAGGCGTCTTCAGAATTCTGTCTCCAGCATCAATGGCTTGCCTACATTTCCAGGTATAGACTCTTCAACGTTAGCTAATACACAAGGATTTCGCGAAGATCAAAGCCAACAACAACACACTCCTTCTCCTTCCAAACATCATATGTCATCTTTGTCTCATCAATTTCATCAATCTATTCACCAGAGCCACCAACACCATCAATCTATATACCAAAGTCAACACGCAGCCACACACTATCCCAGTCAGAACCATCAATGTGACCCTGAACTATCTCACACACAAATGGCTTGCTTGCAACCCCTCACTGGAGGCCATGTAATGCCAAATAGTCCGGCGAAATTTTGTGACCAATGTGGAGCACAGTACTTGAGAGAGACATCCAAATTCTGCTCAGAGTGTGGTTCCAAGAGACTCGGGATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

432

Amino Acids

48.28

Weight (kDa)

6.6

Isoelectric Point (pI)

60.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007044)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02148 AT2G02148 AT2G02148 AT2G02148 AT2G02148
fragaria_vesca	FvH4_4g36300 FvH4_4g36300 FvH4_4g36300 FvH4_4g36300 FvH4_4g36300 FvH4_4g36300 FvH4_4g36300 FvH4_4g36300
malus_domestica	MD13G1010500.v1.1
prunus_persica	Prupe.1G342500_v2.0.a1
pyrus_communis	pycom13g00860
rosa_chinensis	RchiOBHm_Chr4g0446051
rosa_laevigata	RLG00000005695
rosa_multiflora	Rmu_sc0007511.1_g000002
rosa_roxburghii	Rroxscaffold_5G00386450
rosa_rugosa	Rorug01G0481600 Rorug04G0366800
rosa_samantha	Rh4AG428900 Rh4DG436700
rosa_wichuraiana	Rw4G036650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	849
AccB1I	GGYRCC	1 cut(s)	122
AccII	CGCG	2 cut(s)	448, 969
AciI	CCGC	2 cut(s)	95, 176
AclI	AACGTT	1 cut(s)	944
AclWI	GGATC	4 cut(s)	46, 241, 262, 455
AcsI	RAATTY	5 cut(s)	496, 851, 889, 1214, 1259
AcuI	CTGAAG	2 cut(s)	654, 869
AcyI	GRCGYC	2 cut(s)	123, 880
AfaI	GTAC	4 cut(s)	21, 637, 647, 1241
AfiI	CCNNNNNNNGG	2 cut(s)	632, 1181
AflIII	ACRYGT	1 cut(s)	352
AjiI	CACGTC	1 cut(s)	407
AjnI	CCWGG	1 cut(s)	925
AloI	GAACNNNNNNTCC	1 cut(s)	29
AluBI	AGCT	5 cut(s)	8, 578, 587, 791, 950
AluI	AGCT	5 cut(s)	8, 578, 587, 791, 950
Alw21I	GWGCWC	1 cut(s)	1237
Alw26I	GTCTC	5 cut(s)	500, 901, 1035, 1244, 1279
AlwI	GGATC	4 cut(s)	46, 241, 262, 455
Ama87I	CYCGRG	1 cut(s)	1289
AoxI	GGCC	2 cut(s)	814, 1186
ApeKI	GCWGC	3 cut(s)	302, 587, 1100
ApoI	RAATTY	5 cut(s)	496, 851, 889, 1214, 1259
AspLEI	GCGC	1 cut(s)	125
AspS9I	GGNCC	1 cut(s)	92
AsuHPI	GGTGA	4 cut(s)	282, 470, 530, 1046
AvaI	CYCGRG	1 cut(s)	1289
AvaII	GGWCC	1 cut(s)	92
BanI	GGYRCC	1 cut(s)	122
BarI	GAAGNNNNNNTAC	2 cut(s)	922, 954
BbsI	GAAGAC	1 cut(s)	875
Bbv12I	GWGCWC	1 cut(s)	1237
BbvI	GCAGC	3 cut(s)	314, 574, 1112
BccI	CCATC	3 cut(s)	83, 1080, 1134
BceAI	ACGGC	4 cut(s)	110, 154, 175, 801
BciT130I	CCWGG	1 cut(s)	927
BclI	TGATCA	1 cut(s)	382
BcoDI	GTCTC	5 cut(s)	500, 901, 1035, 1244, 1279
BfaI	CTAG	2 cut(s)	9, 840
BfoI	RGCGCY	1 cut(s)	126
BisI	GCNGC	3 cut(s)	303, 588, 1101
BlsI	GCNGC	3 cut(s)	304, 589, 1102
BmcAI	AGTACT	1 cut(s)	1241
Bme1390I	CCNGG	1 cut(s)	927
Bme18I	GGWCC	1 cut(s)	92
BmeT110I	CYCGRG	1 cut(s)	1289
BmgBI	CACGTC	1 cut(s)	407
BmgT120I	GGNCC	1 cut(s)	92
BmiI	GGNNCC	2 cut(s)	124, 1279
BmrFI	CCNGG	1 cut(s)	927
BmrI	ACTGGG	1 cut(s)	1110
BmsI	GCATC	1 cut(s)	912
BmuI	ACTGGG	1 cut(s)	1110
BpiI	GAAGAC	1 cut(s)	875
BpmI	CTGGAG	2 cut(s)	883, 1203
BpuEI	CTTGAG	1 cut(s)	1264
BsaHI	GRCGYC	2 cut(s)	123, 880
BsaXI	ACNNNNNCTCC	7 cut(s)	27, 111, 141, 985, 1015, 1176, 1206
Bsc4I	CCNNNNNNNGG	2 cut(s)	632, 1181
Bse1I	ACTGG	3 cut(s)	666, 1116, 1186
BseBI	CCWGG	1 cut(s)	927
BseGI	GGATG	2 cut(s)	445, 1253
BseLI	CCNNNNNNNGG	2 cut(s)	632, 1181
BseMII	CTCAG	1 cut(s)	1281
BseNI	ACTGG	3 cut(s)	666, 1116, 1186
BseXI	GCAGC	3 cut(s)	314, 574, 1112
Bsh1236I	CGCG	2 cut(s)	448, 969
BshFI	GGCC	2 cut(s)	816, 1188
BshNI	GGYRCC	1 cut(s)	122
BsiHKAI	GWGCWC	1 cut(s)	1237
BsiHKCI	CYCGRG	1 cut(s)	1289
BsiSI	CCGG	1 cut(s)	1208
BslI	CCNNNNNNNGG	2 cut(s)	632, 1181
BsmAI	GTCTC	5 cut(s)	500, 901, 1035, 1244, 1279
BsnI	GGCC	2 cut(s)	816, 1188
BsoBI	CYCGRG	1 cut(s)	1289
Bsp1286I	GDGCHC	1 cut(s)	1237
Bsp1407I	TGTACA	1 cut(s)	645
Bsp143I	GATC	7 cut(s)	38, 73, 233, 254, 382, 460, 973
Bsp68I	TCGCGA	1 cut(s)	969
BspACI	CCGC	2 cut(s)	95, 176
BspANI	GGCC	2 cut(s)	816, 1188
BspCNI	CTCAG	1 cut(s)	1280
BspFNI	CGCG	2 cut(s)	448, 969
BspHI	TCATGA	1 cut(s)	385
BspLI	GGNNCC	2 cut(s)	124, 1279
BspPI	GGATC	4 cut(s)	46, 241, 262, 455
BspT107I	GGYRCC	1 cut(s)	122
BsrGI	TGTACA	1 cut(s)	645
BsrI	ACTGG	3 cut(s)	666, 1116, 1186
BssMI	GATC	7 cut(s)	38, 73, 233, 254, 382, 460, 973
BssNI	GRCGYC	2 cut(s)	123, 880
Bst2UI	CCWGG	1 cut(s)	927
Bst4CI	ACNGT	4 cut(s)	113, 182, 480, 1239
Bst6I	CTCTTC	5 cut(s)	175, 422, 649, 708, 943
BstACI	GRCGYC	2 cut(s)	123, 880
BstAUI	TGTACA	1 cut(s)	645
BstC8I	GCNNGC	5 cut(s)	537, 872, 914, 1165, 1169
BstDEI	CTNAG	3 cut(s)	615, 627, 1267
BstENI	CCTNNNNNAGG	1 cut(s)	630
BstF5I	GGATG	2 cut(s)	445, 1253
BstFNI	CGCG	2 cut(s)	448, 969
BstH2I	RGCGCY	1 cut(s)	126
BstHHI	GCGC	1 cut(s)	125
BstKTI	GATC	7 cut(s)	41, 76, 236, 257, 385, 463, 976
BstMAI	GTCTC	5 cut(s)	500, 901, 1035, 1244, 1279
BstMBI	GATC	7 cut(s)	38, 73, 233, 254, 382, 460, 973
BstMWI	GCNNNNNNNGC	4 cut(s)	584, 836, 867, 909
BstNI	CCWGG	1 cut(s)	927
BstNSI	RCATGY	2 cut(s)	356, 646
BstSCI	CCNGG	1 cut(s)	925
BstUI	CGCG	2 cut(s)	448, 969
BstV1I	GCAGC	3 cut(s)	314, 574, 1112
BstV2I	GAAGAC	1 cut(s)	875
BstX2I	RGATCY	2 cut(s)	233, 254
BstYI	RGATCY	2 cut(s)	233, 254
BsuRI	GGCC	2 cut(s)	816, 1188
BtgZI	GCGATG	1 cut(s)	40
BtrI	CACGTC	1 cut(s)	407
BtsCI	GGATG	2 cut(s)	445, 1253
BtsIMutI	CAGTG	1 cut(s)	1179
BtuMI	TCGCGA	1 cut(s)	969
Cac8I	GCNNGC	5 cut(s)	537, 872, 914, 1165, 1169
CciI	TCATGA	1 cut(s)	385
CfoI	GCGC	1 cut(s)	125
Cfr13I	GGNCC	1 cut(s)	92
CseI	GACGC	2 cut(s)	869, 876
Csp6I	GTAC	4 cut(s)	20, 636, 646, 1240
CviAII	CATG	7 cut(s)	188, 241, 353, 386, 643, 710, 1190
CviQI	GTAC	4 cut(s)	20, 636, 646, 1240
DdeI	CTNAG	3 cut(s)	615, 627, 1267
DinI	GGCGCC	1 cut(s)	124
DpnI	GATC	7 cut(s)	40, 75, 235, 256, 384, 462, 975
DpnII	GATC	7 cut(s)	38, 73, 233, 254, 382, 460, 973
Eam1104I	CTCTTC	5 cut(s)	175, 422, 649, 708, 943
EarI	CTCTTC	5 cut(s)	175, 422, 649, 708, 943
EciI	GGCGGA	1 cut(s)	84
Eco32I	GATATC	1 cut(s)	106
Eco47I	GGWCC	1 cut(s)	92
Eco57I	CTGAAG	2 cut(s)	654, 869
Eco88I	CYCGRG	1 cut(s)	1289
EcoNI	CCTNNNNNAGG	1 cut(s)	630
EcoRI	GAATTC	1 cut(s)	889
EcoRII	CCWGG	1 cut(s)	925
EcoRV	GATATC	1 cut(s)	106
EcoT22I	ATGCAT	1 cut(s)	189
EgeI	GGCGCC	1 cut(s)	124
EheI	GGCGCC	1 cut(s)	124
FaeI	CATG	7 cut(s)	191, 244, 356, 389, 646, 713, 1193
FatI	CATG	7 cut(s)	187, 240, 352, 385, 642, 709, 1189
FauNDI	CATATG	1 cut(s)	1017
FbaI	TGATCA	1 cut(s)	382
Fnu4HI	GCNGC	3 cut(s)	303, 588, 1101
FokI	GGATG	2 cut(s)	452, 1240
Fsp4HI	GCNGC	3 cut(s)	303, 588, 1101
FspBI	CTAG	2 cut(s)	9, 840
GlaI	GCGC	1 cut(s)	124
GluI	GCNGC	3 cut(s)	303, 588, 1101
GsuI	CTGGAG	2 cut(s)	883, 1203
HaeII	RGCGCY	1 cut(s)	126
HaeIII	GGCC	2 cut(s)	816, 1188
HapII	CCGG	1 cut(s)	1208
HgaI	GACGC	2 cut(s)	869, 876
HhaI	GCGC	1 cut(s)	125
Hin1I	GRCGYC	2 cut(s)	123, 880
Hin1II	CATG	7 cut(s)	191, 244, 356, 389, 646, 713, 1193
Hin6I	GCGC	1 cut(s)	123
HinP1I	GCGC	1 cut(s)	123
HincII	GTYRAC	1 cut(s)	1094
HindII	GTYRAC	1 cut(s)	1094
HinfI	GANTC	6 cut(s)	47, 164, 191, 395, 935, 1287
HpaII	CCGG	1 cut(s)	1208
HphI	GGTGA	4 cut(s)	282, 470, 530, 1046
Hpy166II	GTNNAC	1 cut(s)	1094
Hpy188I	TCNGA	8 cut(s)	46, 119, 218, 439, 465, 888, 1122, 1270
Hpy188III	TCNNGA	7 cut(s)	134, 386, 399, 581, 695, 968, 1291
Hpy8I	GTNNAC	1 cut(s)	1094
Hpy99I	CGWCG	3 cut(s)	89, 113, 870
HpyAV	CCTTC	4 cut(s)	221, 449, 1008, 1014
HpyCH4III	ACNGT	4 cut(s)	113, 182, 480, 1239
HpyCH4IV	ACGT	3 cut(s)	379, 406, 944
HpyCH4V	TGCA	6 cut(s)	187, 211, 322, 494, 642, 1171
HpyF10VI	GCNNNNNNNGC	4 cut(s)	584, 836, 867, 909
HpyF3I	CTNAG	3 cut(s)	615, 627, 1267
HpySE526I	ACGT	3 cut(s)	379, 406, 944
Hsp92I	GRCGYC	2 cut(s)	123, 880
Hsp92II	CATG	7 cut(s)	191, 244, 356, 389, 646, 713, 1193
HspAI	GCGC	1 cut(s)	123
KasI	GGCGCC	1 cut(s)	122
Ksp22I	TGATCA	1 cut(s)	382
Kzo9I	GATC	7 cut(s)	38, 73, 233, 254, 382, 460, 973
LmnI	GCTCC	2 cut(s)	5, 1232
Lsp1109I	GCAGC	3 cut(s)	314, 574, 1112
LweI	GCATC	1 cut(s)	912
MaeI	CTAG	2 cut(s)	9, 840
MaeII	ACGT	3 cut(s)	379, 406, 944
MaeIII	GTNAC	4 cut(s)	134, 474, 1133, 1220
MalI	GATC	7 cut(s)	40, 75, 235, 256, 384, 462, 975
MboI	GATC	7 cut(s)	38, 73, 233, 254, 382, 460, 973
MflI	RGATCY	2 cut(s)	233, 254
MhlI	GDGCHC	1 cut(s)	1237
MluCI	AATT	9 cut(s)	31, 496, 608, 698, 851, 889, 1037, 1214, 1259
Mly113I	GGCGCC	1 cut(s)	123
MlyI	GAGTC	2 cut(s)	929, 1281
MmeI	TCCRAC	1 cut(s)	417
Mph1103I	ATGCAT	1 cut(s)	189
MseI	TTAA	5 cut(s)	272, 611, 741, 801, 809
MslI	CAYNNNNRTG	2 cut(s)	1131, 1157
MspI	CCGG	1 cut(s)	1208
MspR9I	CCNGG	1 cut(s)	927
MvaI	CCWGG	1 cut(s)	927
MvnI	CGCG	2 cut(s)	448, 969
MwoI	GCNNNNNNNGC	4 cut(s)	584, 836, 867, 909
NarI	GGCGCC	1 cut(s)	123
NdeI	CATATG	1 cut(s)	1017
NdeII	GATC	7 cut(s)	38, 73, 233, 254, 382, 460, 973
NlaIII	CATG	7 cut(s)	191, 244, 356, 389, 646, 713, 1193
NlaIV	GGNNCC	2 cut(s)	124, 1279
NmeAIII	GCCGAG	1 cut(s)	123
NmuCI	GTSAC	3 cut(s)	134, 1133, 1220
NruI	TCGCGA	1 cut(s)	969
NsiI	ATGCAT	1 cut(s)	189
NspI	RCATGY	2 cut(s)	356, 646
PagI	TCATGA	1 cut(s)	385
PciI	ACATGT	1 cut(s)	352
PcsI	WCGNNNNNNNCGW	1 cut(s)	123
PfeI	GAWTC	4 cut(s)	47, 164, 191, 395
PkrI	GCNGC	3 cut(s)	304, 589, 1102
PleI	GAGTC	2 cut(s)	929, 1281
PluTI	GGCGCC	1 cut(s)	126
PpsI	GAGTC	2 cut(s)	929, 1281
PscI	ACATGT	1 cut(s)	352
PsiI	TTATAA	1 cut(s)	849
Psp1406I	AACGTT	1 cut(s)	944
Psp6I	CCWGG	1 cut(s)	925
PspGI	CCWGG	1 cut(s)	925
PspN4I	GGNNCC	2 cut(s)	124, 1279
PspPI	GGNCC	1 cut(s)	92
PsuI	RGATCY	2 cut(s)	233, 254
RruI	TCGCGA	1 cut(s)	969
RsaI	GTAC	4 cut(s)	21, 637, 647, 1241
RsaNI	GTAC	4 cut(s)	20, 636, 646, 1240
RseI	CAYNNNNRTG	2 cut(s)	1131, 1157
SaqAI	TTAA	5 cut(s)	272, 611, 741, 801, 809
SatI	GCNGC	3 cut(s)	303, 588, 1101
Sau3AI	GATC	7 cut(s)	38, 73, 233, 254, 382, 460, 973
Sau96I	GGNCC	1 cut(s)	92
ScaI	AGTACT	1 cut(s)	1241
SchI	GAGTC	2 cut(s)	929, 1281
ScrFI	CCNGG	1 cut(s)	927
SduI	GDGCHC	1 cut(s)	1237
SfaNI	GCATC	1 cut(s)	912
SfoI	GGCGCC	1 cut(s)	124
SinI	GGWCC	1 cut(s)	92
SmiMI	CAYNNNNRTG	2 cut(s)	1131, 1157
SmlI	CTYRAG	1 cut(s)	1243
SmoI	CTYRAG	1 cut(s)	1243
Sse9I	AATT	9 cut(s)	31, 496, 608, 698, 851, 889, 1037, 1214, 1259
SsiI	CCGC	2 cut(s)	95, 176
SspDI	GGCGCC	1 cut(s)	122
SspMI	CTAG	2 cut(s)	9, 840
StyD4I	CCNGG	1 cut(s)	925
TaaI	ACNGT	4 cut(s)	113, 182, 480, 1239
TaiI	ACGT	3 cut(s)	382, 409, 947
TaqI	TCGA	3 cut(s)	87, 108, 865
TasI	AATT	9 cut(s)	31, 496, 608, 698, 851, 889, 1037, 1214, 1259
TatI	WGTACW	3 cut(s)	19, 645, 1239
TfiI	GAWTC	4 cut(s)	47, 164, 191, 395
Tru1I	TTAA	5 cut(s)	272, 611, 741, 801, 809
Tru9I	TTAA	5 cut(s)	272, 611, 741, 801, 809
TscAI	CASTG	1 cut(s)	1186
TseFI	GTSAC	3 cut(s)	134, 1133, 1220
TseI	GCWGC	3 cut(s)	302, 587, 1100
Tsp45I	GTSAC	3 cut(s)	134, 1133, 1220
TspDTI	ATGAA	6 cut(s)	204, 468, 531, 726, 837, 1031
TspGWI	ACGGA	1 cut(s)	73
TspRI	CASTG	1 cut(s)	1186
VpaK11BI	GGWCC	1 cut(s)	92
XagI	CCTNNNNNAGG	1 cut(s)	630
XapI	RAATTY	5 cut(s)	496, 851, 889, 1214, 1259
XceI	RCATGY	2 cut(s)	356, 646
XspI	CTAG	2 cut(s)	9, 840
ZrmI	AGTACT	1 cut(s)	1241
Zsp2I	ATGCAT	1 cut(s)	189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.