Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007511.1

Orthogroup ID

OG0007044

Physical Location & Seq

Genomic Coordinates Reverse (-)

10693 .. 14946

Gene Structure 4254 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007511.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2595 bp

atggggagtagggttccggtgcagcactacaacatgagatcgccgccgccgagttccttcatcggcggcagccccctgcacgacctcaacaacaacgccgtcgattcccgctccaccaagctcgaatcgatcggcggcggcgacgacgtcgtcgtcaacgacagcctcgacaacgacgacgattccagcgccgtcgtcagcgactgtatccacgagtcctactcgaattctctgccgattcacggcgtcggagtggaagaagagcggtctagtctcgacaacgacgggtcgtctagctccagagctccgtacgacattttgtcccttcaagatgtgtcacctattgaatcatcaagggctagatttctgcaacttgtggtggatcattttattagtgaacatgtggtcgaagcgattgatagtgagggtggtggtactgattatagtgctcagtctggccaagataaacttaataagaggaagcatggggaggtacagcttgaaggagacccgaggttcgctttgccattgatgtatattgcaaatatgtaccaaactttagttcatgaggtagacactaggcttgcttccgtgggtggatttcgcgaaaagactattggtgttgctcttgaagcagctggtggtttgtatagattgctggctaagaaatttcccaagaaaggatcatgtacatttaagagaagagaattggccacttctcttgaaacgaggacaagatttccagagttggtcgtacaagaagagaagcgtgtccgttttgttgtagtcaatggtttggatattgttgaaaagccaaatagcctacctattgatgatgctgagtggttcataagattgactggtcggaatgaagtggctgtctctgctcgagactttaagttctactctccaagacacaagtataggcgtgttccatcaaactcttcgcctaatatgatgggtttacctacgtatcctggccctgacaattcttctatgttggctgctgcccaaggattccgctcagtaaatgaaccacaaaatcagcaggagactccatcaaagcatcatcatatgcaacctctgtcactccaacctcagtttcaaactgttcaccagaatcatcaccaatcaatgcaccaaagtcaacacgctgttcactattcccaaaaccatgaatgcggtccaacctcgcacctgcctgaaatccctcatgctcaccattcgccaaccatatcgcaacacatatcttgcttacaacacgtagggggacgcttgcatgtattgatcctctacacaactgcttcttcttcttcttcggtcaatgtggccggcgggggcgggtcggcccgggcgaggagtttggaagagttgttgaagacggtggcggtgacgccgatgaggatggcggccttggcgtattgcttggcggtttggagaatggagtgggggttggtggaggcggtgactttgagggcattttgggaatgtggaggggcaaaacggagaagagaaggttgggtgggtttggtggaagtgagcttgaattggaagagggatgaggaggaggaggctagagttgaggagttcatgcctaccgaggactcgtcagtctcatctgctcagcctcaaaccatgaactcctcaactctagcctcctcctcctcatccctcttccaattcaagctcacttccaccaaacccacccaaccttctcttctccgttttgcccctccacattcccaaaatgccctcaaagtcaccgcctccaccaacccccactccattctccaaaccgccaagcaatacgccaaggccgccatcctcatcggcgtcaccgccaccgtcttcaacaactcttccaaactcctcgcccgggccgacccgcccccgccggccacattgaccgaagaagaagaagaagcagctcccaaccagggccaaaatgaaacccaagcctctccgttatccgatttcctcggctccaactccgacgccgtcgacgccctcaagtcgctcctgcagcagaagctcgagaacggcgaggacgacgaggcgctgaagatcctgcagcgcctcgcggcggcgcagccgtcggtgacggagtggaagttcctcatggccagggttctgagcgagatgggggaaaccggtagtgcgcgccaggtgttcgaggaaattctcgagtcgaatccactgtcgtttgaggccttgttcgagaatgctctgctgatggaccgctccggcgagggccacgccgtgatcaggaggctggaggaggcgctggcggtggcggaggaggagaacaaggccaaggaggccagggatgtgaagctgataatggcgcagatacagttcctgcagaagaatgtggaggatgcgttgagtagctacaatgagttggtgaaggaggatcccaaagacttcaggccttatttttgtagaggaatgatttacagcttgcttgagaggaatgaggaggccaaggagcagtttgagaagtatcggcagctttcgccgaagaagtttgaggtggatggctacttgatgaagccattgtcgagaatcaagcttttcgggagcgatgagaattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

864

Amino Acids

95.81

Weight (kDa)

5.69

Isoelectric Point (pI)

58.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007044)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02148 AT2G02148 AT2G02148 AT2G02148 AT2G02148
fragaria_vesca	FvH4_4g36300 FvH4_4g36300 FvH4_4g36300 FvH4_4g36300 FvH4_4g36300 FvH4_4g36300 FvH4_4g36300 FvH4_4g36300
malus_domestica	MD13G1010500.v1.1
prunus_persica	Prupe.1G342500_v2.0.a1
pyrus_communis	pycom13g00860
rosa_chinensis	RchiOBHm_Chr4g0446051
rosa_laevigata	RLG00000005695
rosa_multiflora	Rmu_sc0007511.1_g000002
rosa_roxburghii	Rroxscaffold_5G00386450
rosa_rugosa	Rorug01G0481600 Rorug04G0366800
rosa_samantha	Rh4AG428900 Rh4DG436700
rosa_wichuraiana	Rw4G036650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1206
AasI	GACNNNNNNGTC	3 cut(s)	149, 152, 1610
AatII	GACGTC	1 cut(s)	150
Acc36I	ACCTGC	1 cut(s)	1206
AccBSI	CCGCTC	4 cut(s)	111, 265, 1023, 2241
AccI	GTMKAC	2 cut(s)	573, 2001
AccII	CGCG	3 cut(s)	606, 2081, 2161
AclWI	GGATC	6 cut(s)	390, 691, 1282, 2059, 2408, 2421
AcoI	YGGCCR	5 cut(s)	457, 711, 1329, 1896, 2121
AcsI	RAATTY	3 cut(s)	226, 668, 2178
AcuI	CTGAAG	2 cut(s)	2081, 2410
AcyI	GRCGYC	6 cut(s)	147, 246, 1394, 1833, 1995, 2004
AdeI	CACNNNGTG	1 cut(s)	2260
AfaI	GTAC	6 cut(s)	311, 436, 495, 551, 691, 756
AfiI	CCNNNNNNNGG	7 cut(s)	242, 680, 1356, 1876, 1937, 2083, 2265
AflIII	ACRYGT	2 cut(s)	400, 1261
AgeI	ACCGGT	1 cut(s)	2150
AhdI	GACNNNNNGTC	2 cut(s)	289, 319
AjnI	CCWGG	5 cut(s)	976, 1935, 2123, 2163, 2321
AloI	GAACNNNNNNTCC	2 cut(s)	2096, 2128
Alw21I	GWGCWC	2 cut(s)	307, 451
Alw26I	GTCTC	6 cut(s)	278, 501, 885, 886, 1046, 1618
AlwI	GGATC	6 cut(s)	390, 691, 1282, 2059, 2408, 2421
AlwNI	CAGNNNCTG	2 cut(s)	204, 2359
Ama87I	CYCGRG	6 cut(s)	511, 888, 1350, 1875, 2033, 2183
ApoI	RAATTY	3 cut(s)	226, 668, 2178
ArsI	GACNNNNNNTTYG	4 cut(s)	500, 532, 2183, 2215
AsiGI	ACCGGT	1 cut(s)	2150
AspLEI	GCGC	8 cut(s)	191, 2059, 2076, 2089, 2161, 2163, 2284, 2347
AspS9I	GGNCC	7 cut(s)	980, 1184, 1348, 1878, 1939, 2236, 2251
AsuC2I	CCSGG	4 cut(s)	1351, 1352, 1876, 1877
AvaI	CYCGRG	6 cut(s)	511, 888, 1350, 1875, 2033, 2183
AvaII	GGWCC	2 cut(s)	1184, 2236
BaeI	ACNNNNGTAYC	2 cut(s)	956, 989
BalI	TGGCCA	3 cut(s)	459, 713, 2123
BamHI	GGATCC	1 cut(s)	2413
BanII	GRGCYC	1 cut(s)	307
BauI	CACGAG	1 cut(s)	212
BbsI	GAAGAC	2 cut(s)	1385, 1840
Bbv12I	GWGCWC	2 cut(s)	307, 451
BccI	CCATC	8 cut(s)	943, 952, 1066, 1399, 1829, 2134, 2227, 2531
BceAI	ACGGC	7 cut(s)	83, 176, 259, 1982, 2056, 2077, 2243
BcgI	CGANNNNNNTGC	2 cut(s)	214, 248
BciT130I	CCWGG	5 cut(s)	978, 1937, 2125, 2165, 2323
BciVI	GTATCC	2 cut(s)	218, 984
BclI	TGATCA	1 cut(s)	2262
BcnI	CCSGG	4 cut(s)	1351, 1352, 1876, 1877
BcoDI	GTCTC	6 cut(s)	278, 501, 885, 886, 1046, 1618
BfaI	CTAG	6 cut(s)	270, 294, 360, 579, 1575, 1652
BfmI	CTRYAG	3 cut(s)	2021, 2069, 2360
BfoI	RGCGCY	4 cut(s)	192, 2060, 2077, 2285
BfuAI	ACCTGC	1 cut(s)	1206
BfuI	GTATCC	2 cut(s)	218, 984
BglI	GCCNNNNNGGC	1 cut(s)	2318
BlpI	GCTNAGC	1 cut(s)	1623
Bme1390I	CCNGG	9 cut(s)	978, 1351, 1352, 1876, 1877, 1937, 2125, 2165, 2323
Bme18I	GGWCC	2 cut(s)	1184, 2236
BmeRI	GACNNNNNGTC	2 cut(s)	289, 319
BmeT110I	CYCGRG	6 cut(s)	511, 888, 1350, 1875, 2033, 2183
BmgT120I	GGNCC	7 cut(s)	980, 1184, 1348, 1878, 1939, 2236, 2251
BmiI	GGNNCC	3 cut(s)	15, 1984, 2415
BmrFI	CCNGG	9 cut(s)	978, 1351, 1352, 1876, 1877, 1937, 2125, 2165, 2323
BmsI	GCATC	3 cut(s)	826, 1075, 2368
BpiI	GAAGAC	2 cut(s)	1385, 1840
BplI	GAGNNNNNCTC	2 cut(s)	206, 238
BpmI	CTGGAG	2 cut(s)	283, 2294
Bpu1102I	GCTNAGC	1 cut(s)	1623
BpuEI	CTTGAG	2 cut(s)	1994, 2486
BpuMI	CCSGG	4 cut(s)	1351, 1352, 1876, 1877
Bsa29I	ATCGAT	1 cut(s)	128
BsaAI	YACGTR	2 cut(s)	972, 1264
BsaHI	GRCGYC	6 cut(s)	147, 246, 1394, 1833, 1995, 2004
BsaI	GGTCTC	1 cut(s)	501
BsaWI	WCCGGW	2 cut(s)	16, 2150
BsaXI	ACNNNNNCTCC	8 cut(s)	1436, 1466, 1766, 1796, 2096, 2126, 2366, 2396
Bsc4I	CCNNNNNNNGG	7 cut(s)	242, 680, 1356, 1876, 1937, 2083, 2265
Bse118I	RCCGGY	3 cut(s)	1331, 1894, 2150
Bse1I	ACTGG	1 cut(s)	865
BseBI	CCWGG	5 cut(s)	978, 1937, 2125, 2165, 2323
BseCI	ATCGAT	1 cut(s)	128
BseGI	GGATG	7 cut(s)	1410, 1564, 1667, 1821, 2332, 2383, 2542
BseLI	CCNNNNNNNGG	7 cut(s)	242, 680, 1356, 1876, 1937, 2083, 2265
BseMII	CTCAG	6 cut(s)	464, 831, 1038, 1112, 1637, 2123
BseNI	ACTGG	1 cut(s)	865
BsePI	GCGCGC	1 cut(s)	2159
BsgI	GTGCAG	2 cut(s)	41, 62
Bsh1236I	CGCG	3 cut(s)	606, 2081, 2161
Bsh1285I	CGRYCG	1 cut(s)	132
BshTI	ACCGGT	1 cut(s)	2150
BshVI	ATCGAT	1 cut(s)	128
BsiEI	CGRYCG	1 cut(s)	132
BsiHKAI	GWGCWC	2 cut(s)	307, 451
BsiHKCI	CYCGRG	6 cut(s)	511, 888, 1350, 1875, 2033, 2183
BsiSI	CCGG	7 cut(s)	17, 1332, 1351, 1876, 1895, 2151, 2244
BsiWI	CGTACG	1 cut(s)	309
BslFI	GGGAC	2 cut(s)	307, 1284
BslI	CCNNNNNNNGG	7 cut(s)	242, 680, 1356, 1876, 1937, 2083, 2265
BsmAI	GTCTC	6 cut(s)	278, 501, 885, 886, 1046, 1618
BsmFI	GGGAC	2 cut(s)	307, 1284
BsmI	GAATGC	2 cut(s)	1184, 2227
Bso31I	GGTCTC	1 cut(s)	501
BsoBI	CYCGRG	6 cut(s)	511, 888, 1350, 1875, 2033, 2183
Bsp1286I	GDGCHC	2 cut(s)	307, 451
Bsp1407I	TGTACA	1 cut(s)	689
Bsp143I	GATC	8 cut(s)	38, 129, 382, 683, 1287, 2064, 2262, 2413
Bsp1720I	GCTNAGC	1 cut(s)	1623
Bsp68I	TCGCGA	1 cut(s)	606
BspCNI	CTCAG	6 cut(s)	463, 832, 1037, 1111, 1636, 2124
BspDI	ATCGAT	1 cut(s)	128
BspFNI	CGCG	3 cut(s)	606, 2081, 2161
BspHI	TCATGA	1 cut(s)	565
BspLI	GGNNCC	3 cut(s)	15, 1984, 2415
BspMAI	CTGCAG	3 cut(s)	2025, 2073, 2364
BspMI	ACCTGC	1 cut(s)	1206
BspPI	GGATC	6 cut(s)	390, 691, 1282, 2059, 2408, 2421
BspQI	GCTCTTC	1 cut(s)	255
BspTNI	GGTCTC	1 cut(s)	501
BsrBI	CCGCTC	4 cut(s)	111, 265, 1023, 2241
BsrFI	RCCGGY	3 cut(s)	1331, 1894, 2150
BsrGI	TGTACA	1 cut(s)	689
BsrI	ACTGG	1 cut(s)	865
BssAI	RCCGGY	3 cut(s)	1331, 1894, 2150
BssHII	GCGCGC	1 cut(s)	2159
BssMI	GATC	8 cut(s)	38, 129, 382, 683, 1287, 2064, 2262, 2413
BssNI	GRCGYC	6 cut(s)	147, 246, 1394, 1833, 1995, 2004
BssSI	CACGAG	1 cut(s)	212
BssT1I	CCWWGG	5 cut(s)	1012, 1413, 1812, 2313, 2484
Bst2BI	CACGAG	1 cut(s)	212
Bst2UI	CCWGG	5 cut(s)	978, 1937, 2125, 2165, 2323
Bst4CI	ACNGT	6 cut(s)	206, 1111, 1384, 1846, 2199, 2355
BstACI	GRCGYC	6 cut(s)	147, 246, 1394, 1833, 1995, 2004
BstAUI	TGTACA	1 cut(s)	689
BstBAI	YACGTR	2 cut(s)	972, 1264
BstC8I	GCNNGC	8 cut(s)	585, 660, 1277, 1333, 1896, 2161, 2286, 2462
BstDEI	CTNAG	7 cut(s)	450, 663, 840, 1024, 1098, 1623, 2132
BstDSI	CCRYGG	1 cut(s)	591
BstF5I	GGATG	7 cut(s)	1410, 1564, 1667, 1821, 2332, 2383, 2542
BstFNI	CGCG	3 cut(s)	606, 2081, 2161
BstH2I	RGCGCY	4 cut(s)	192, 2060, 2077, 2285
BstHHI	GCGC	8 cut(s)	191, 2059, 2076, 2089, 2161, 2163, 2284, 2347
BstKTI	GATC	8 cut(s)	41, 132, 385, 686, 1290, 2067, 2265, 2416
BstMAI	GTCTC	6 cut(s)	278, 501, 885, 886, 1046, 1618
BstMBI	GATC	8 cut(s)	38, 129, 382, 683, 1287, 2064, 2262, 2413
BstMCI	CGRYCG	1 cut(s)	132
BstMWI	GCNNNNNNNGC	9 cut(s)	632, 884, 1415, 1817, 2003, 2023, 2029, 2318, 2515
BstNI	CCWGG	5 cut(s)	978, 1937, 2125, 2165, 2323
BstNSI	RCATGY	2 cut(s)	404, 1283
BstSCI	CCNGG	9 cut(s)	976, 1349, 1350, 1874, 1875, 1935, 2123, 2163, 2321
BstSFI	CTRYAG	3 cut(s)	2021, 2069, 2360
BstSNI	TACGTA	1 cut(s)	972
BstUI	CGCG	3 cut(s)	606, 2081, 2161
BstV2I	GAAGAC	2 cut(s)	1385, 1840
BstX2I	RGATCY	2 cut(s)	2064, 2413
BstYI	RGATCY	2 cut(s)	2064, 2413
Bsu15I	ATCGAT	1 cut(s)	128
BsuI	GTATCC	2 cut(s)	218, 984
BsuTUI	ATCGAT	1 cut(s)	128
BtgI	CCRYGG	1 cut(s)	591
BtsCI	GGATG	7 cut(s)	1410, 1564, 1667, 1821, 2332, 2383, 2542
BtsIMutI	CAGTG	1 cut(s)	2195
BtuMI	TCGCGA	1 cut(s)	606
BveI	ACCTGC	1 cut(s)	1206
Cac8I	GCNNGC	8 cut(s)	585, 660, 1277, 1333, 1896, 2161, 2286, 2462
CaiI	CAGNNNCTG	2 cut(s)	204, 2359
CciI	TCATGA	1 cut(s)	565
CfoI	GCGC	8 cut(s)	191, 2059, 2076, 2089, 2161, 2163, 2284, 2347
Cfr10I	RCCGGY	3 cut(s)	1331, 1894, 2150
Cfr13I	GGNCC	7 cut(s)	980, 1184, 1348, 1878, 1939, 2236, 2251
Cfr9I	CCCGGG	2 cut(s)	1350, 1875
ClaI	ATCGAT	1 cut(s)	128
CseI	GACGC	6 cut(s)	235, 1281, 1402, 1822, 2003, 2012
Csp6I	GTAC	6 cut(s)	310, 435, 494, 550, 690, 755
CspAI	ACCGGT	1 cut(s)	2150
CspCI	CAANNNNNGTGG	2 cut(s)	703, 738
CviQI	GTAC	6 cut(s)	310, 435, 494, 550, 690, 755
DdeI	CTNAG	7 cut(s)	450, 663, 840, 1024, 1098, 1623, 2132
DpnI	GATC	8 cut(s)	40, 131, 384, 685, 1289, 2066, 2264, 2415
DpnII	GATC	8 cut(s)	38, 129, 382, 683, 1287, 2064, 2262, 2413
DraIII	CACNNNGTG	1 cut(s)	2260
DrdI	GACNNNNNNGTC	3 cut(s)	149, 152, 1610
DriI	GACNNNNNGTC	2 cut(s)	289, 319
DseDI	GACNNNNNNGTC	3 cut(s)	149, 152, 1610
EaeI	YGGCCR	5 cut(s)	457, 711, 1329, 1896, 2121
Eam1105I	GACNNNNNGTC	2 cut(s)	289, 319
EciI	GGCGGA	1 cut(s)	2309
Ecl136II	GAGCTC	1 cut(s)	305
Eco105I	TACGTA	1 cut(s)	972
Eco130I	CCWWGG	5 cut(s)	1012, 1413, 1812, 2313, 2484
Eco147I	AGGCCT	2 cut(s)	2210, 2431
Eco24I	GRGCYC	1 cut(s)	307
Eco31I	GGTCTC	1 cut(s)	501
Eco47I	GGWCC	2 cut(s)	1184, 2236
Eco53kI	GAGCTC	1 cut(s)	305
Eco57I	CTGAAG	2 cut(s)	2081, 2410
Eco88I	CYCGRG	6 cut(s)	511, 888, 1350, 1875, 2033, 2183
EcoICRI	GAGCTC	1 cut(s)	305
EcoRI	GAATTC	1 cut(s)	226
EcoRII	CCWGG	5 cut(s)	976, 1935, 2123, 2163, 2321
EcoT14I	CCWWGG	5 cut(s)	1012, 1413, 1812, 2313, 2484
EcoT38I	GRGCYC	1 cut(s)	307
ErhI	CCWWGG	5 cut(s)	1012, 1413, 1812, 2313, 2484
FalI	AAGNNNNNCTT	2 cut(s)	453, 485
FaqI	GGGAC	2 cut(s)	307, 1284
FauI	CCCGC	5 cut(s)	116, 1328, 1334, 1893, 1899
FauNDI	CATATG	1 cut(s)	1074
FbaI	TGATCA	1 cut(s)	2262
FblI	GTMKAC	2 cut(s)	573, 2001
FokI	GGATG	7 cut(s)	1417, 1571, 1654, 1808, 2339, 2390, 2549
FriOI	GRGCYC	1 cut(s)	307
FspBI	CTAG	6 cut(s)	270, 294, 360, 579, 1575, 1652
GlaI	GCGC	8 cut(s)	190, 2058, 2075, 2088, 2160, 2162, 2283, 2346
GsuI	CTGGAG	2 cut(s)	283, 2294
HaeII	RGCGCY	4 cut(s)	192, 2060, 2077, 2285
HapII	CCGG	7 cut(s)	17, 1332, 1351, 1876, 1895, 2151, 2244
HgaI	GACGC	6 cut(s)	235, 1281, 1402, 1822, 2003, 2012
HhaI	GCGC	8 cut(s)	191, 2059, 2076, 2089, 2161, 2163, 2284, 2347
Hin1I	GRCGYC	6 cut(s)	147, 246, 1394, 1833, 1995, 2004
Hin6I	GCGC	8 cut(s)	189, 2057, 2074, 2087, 2159, 2161, 2282, 2345
HinP1I	GCGC	8 cut(s)	189, 2057, 2074, 2087, 2159, 2161, 2282, 2345
HincII	GTYRAC	3 cut(s)	157, 1148, 2002
HindII	GTYRAC	3 cut(s)	157, 1148, 2002
HindIII	AAGCTT	1 cut(s)	2570
HpaII	CCGG	7 cut(s)	17, 1332, 1351, 1876, 1895, 2151, 2244
Hpy166II	GTNNAC	8 cut(s)	157, 398, 574, 965, 1114, 1148, 1159, 2002
Hpy188I	TCNGA	5 cut(s)	251, 867, 1972, 1993, 2133
Hpy8I	GTNNAC	8 cut(s)	157, 398, 574, 965, 1114, 1148, 1159, 2002
HpyAV	CCTTC	6 cut(s)	67, 335, 497, 1508, 1722, 2401
HpyCH4III	ACNGT	6 cut(s)	206, 1111, 1384, 1846, 2199, 2355
HpyCH4IV	ACGT	3 cut(s)	147, 971, 1263
HpyF10VI	GCNNNNNNNGC	9 cut(s)	632, 884, 1415, 1817, 2003, 2023, 2029, 2318, 2515
HpyF3I	CTNAG	7 cut(s)	450, 663, 840, 1024, 1098, 1623, 2132
HpySE526I	ACGT	3 cut(s)	147, 971, 1263
Hsp92I	GRCGYC	6 cut(s)	147, 246, 1394, 1833, 1995, 2004
HspAI	GCGC	8 cut(s)	189, 2057, 2074, 2087, 2159, 2161, 2282, 2345
KroI	GCCGGC	2 cut(s)	1331, 1894
KroNI	GCCGGC	2 cut(s)	1333, 1896
Ksp22I	TGATCA	1 cut(s)	2262
Kzo9I	GATC	8 cut(s)	38, 129, 382, 683, 1287, 2064, 2262, 2413
LguI	GCTCTTC	1 cut(s)	255
LmnI	GCTCC	9 cut(s)	116, 302, 310, 1933, 1988, 2022, 2246, 2488, 2580
LweI	GCATC	3 cut(s)	826, 1075, 2368
MaeI	CTAG	6 cut(s)	270, 294, 360, 579, 1575, 1652
MaeII	ACGT	3 cut(s)	147, 971, 1263
MaeIII	GTNAC	7 cut(s)	336, 1086, 1390, 1465, 1759, 1834, 2098
MalI	GATC	8 cut(s)	40, 131, 384, 685, 1289, 2066, 2264, 2415
MbiI	CCGCTC	4 cut(s)	111, 265, 1023, 2241
MboI	GATC	8 cut(s)	38, 129, 382, 683, 1287, 2064, 2262, 2413
MflI	RGATCY	2 cut(s)	2064, 2413
MhlI	GDGCHC	2 cut(s)	307, 451
MlsI	TGGCCA	3 cut(s)	459, 713, 2123
MluCI	AATT	8 cut(s)	226, 668, 707, 988, 1546, 1679, 2178, 2590
MluNI	TGGCCA	3 cut(s)	459, 713, 2123
MlyI	GAGTC	4 cut(s)	224, 1048, 1598, 2195
MmeI	TCCRAC	6 cut(s)	229, 845, 1117, 1211, 2010, 2016
Mox20I	TGGCCA	3 cut(s)	459, 713, 2123
MroNI	GCCGGC	2 cut(s)	1331, 1894
MscI	TGGCCA	3 cut(s)	459, 713, 2123
MseI	TTAA	3 cut(s)	471, 696, 897
Msp20I	TGGCCA	3 cut(s)	459, 713, 2123
MspA1I	CMGCKG	1 cut(s)	638
MspI	CCGG	7 cut(s)	17, 1332, 1351, 1876, 1895, 2151, 2244
MspR9I	CCNGG	9 cut(s)	978, 1351, 1352, 1876, 1877, 1937, 2125, 2165, 2323
Mva1269I	GAATGC	2 cut(s)	1184, 2227
MvaI	CCWGG	5 cut(s)	978, 1937, 2125, 2165, 2323
MvnI	CGCG	3 cut(s)	606, 2081, 2161
MwoI	GCNNNNNNNGC	9 cut(s)	632, 884, 1415, 1817, 2003, 2023, 2029, 2318, 2515
NaeI	GCCGGC	2 cut(s)	1333, 1896
NciI	CCSGG	4 cut(s)	1351, 1352, 1876, 1877
NdeI	CATATG	1 cut(s)	1074
NdeII	GATC	8 cut(s)	38, 129, 382, 683, 1287, 2064, 2262, 2413
NgoMIV	GCCGGC	2 cut(s)	1331, 1894
NlaIV	GGNNCC	3 cut(s)	15, 1984, 2415
NmeAIII	GCCGAG	2 cut(s)	75, 1959
NmuCI	GTSAC	7 cut(s)	336, 1086, 1390, 1465, 1759, 1834, 2098
NruI	TCGCGA	1 cut(s)	606
NspI	RCATGY	2 cut(s)	404, 1283
PaeR7I	CTCGAG	3 cut(s)	888, 2033, 2183
PagI	TCATGA	1 cut(s)	565
PaqCI	CACCTGC	1 cut(s)	1206
PauI	GCGCGC	1 cut(s)	2159
PceI	AGGCCT	2 cut(s)	2210, 2431
PciI	ACATGT	1 cut(s)	400
PciSI	GCTCTTC	1 cut(s)	255
PctI	GAATGC	2 cut(s)	1184, 2227
PdiI	GCCGGC	2 cut(s)	1333, 1896
PfeI	GAWTC	9 cut(s)	104, 125, 182, 238, 347, 1017, 1120, 2191, 2565
Pfl23II	CGTACG	1 cut(s)	309
PflFI	GACNNNGTC	3 cut(s)	146, 149, 1997
PinAI	ACCGGT	1 cut(s)	2150
Ple19I	CGATCG	1 cut(s)	132
PleI	GAGTC	4 cut(s)	223, 1048, 1598, 2194
PpsI	GAGTC	4 cut(s)	223, 1048, 1598, 2194
Ppu21I	YACGTR	2 cut(s)	972, 1264
PscI	ACATGT	1 cut(s)	400
Psp124BI	GAGCTC	1 cut(s)	307
Psp6I	CCWGG	5 cut(s)	976, 1935, 2123, 2163, 2321
PspGI	CCWGG	5 cut(s)	976, 1935, 2123, 2163, 2321
PspLI	CGTACG	1 cut(s)	309
PspN4I	GGNNCC	3 cut(s)	15, 1984, 2415
PspPI	GGNCC	7 cut(s)	980, 1184, 1348, 1878, 1939, 2236, 2251
PstI	CTGCAG	3 cut(s)	2025, 2073, 2364
PstNI	CAGNNNCTG	2 cut(s)	204, 2359
PsuI	RGATCY	2 cut(s)	2064, 2413
PsyI	GACNNNGTC	3 cut(s)	146, 149, 1997
PteI	GCGCGC	1 cut(s)	2159
PvuI	CGATCG	1 cut(s)	132
PvuII	CAGCTG	1 cut(s)	638
RruI	TCGCGA	1 cut(s)	606
RsaI	GTAC	6 cut(s)	311, 436, 495, 551, 691, 756
RsaNI	GTAC	6 cut(s)	310, 435, 494, 550, 690, 755
SacI	GAGCTC	1 cut(s)	307
SalI	GTCGAC	1 cut(s)	2000
SapI	GCTCTTC	1 cut(s)	255
SaqAI	TTAA	3 cut(s)	471, 696, 897
Sau3AI	GATC	8 cut(s)	38, 129, 382, 683, 1287, 2064, 2262, 2413
Sau96I	GGNCC	7 cut(s)	980, 1184, 1348, 1878, 1939, 2236, 2251
SchI	GAGTC	4 cut(s)	224, 1048, 1598, 2195
ScrFI	CCNGG	9 cut(s)	978, 1351, 1352, 1876, 1877, 1937, 2125, 2165, 2323
SduI	GDGCHC	2 cut(s)	307, 451
SfaNI	GCATC	3 cut(s)	826, 1075, 2368
SfcI	CTRYAG	3 cut(s)	2021, 2069, 2360
SfiI	GGCCNNNNNGGCC	1 cut(s)	2318
Sfr274I	CTCGAG	3 cut(s)	888, 2033, 2183
SgrDI	CGTCGACG	1 cut(s)	2000
SinI	GGWCC	2 cut(s)	1184, 2236
SlaI	CTCGAG	3 cut(s)	888, 2033, 2183
SmaI	CCCGGG	2 cut(s)	1352, 1877
SmlI	CTYRAG	5 cut(s)	888, 2009, 2033, 2183, 2465
SmoI	CTYRAG	5 cut(s)	888, 2009, 2033, 2183, 2465
SnaBI	TACGTA	1 cut(s)	972
SrfI	GCCCGGGC	2 cut(s)	1352, 1877
Sse9I	AATT	8 cut(s)	226, 668, 707, 988, 1546, 1679, 2178, 2590
SseBI	AGGCCT	2 cut(s)	2210, 2431
SspMI	CTAG	6 cut(s)	270, 294, 360, 579, 1575, 1652
SstI	GAGCTC	1 cut(s)	307
StuI	AGGCCT	2 cut(s)	2210, 2431
StyD4I	CCNGG	9 cut(s)	976, 1349, 1350, 1874, 1875, 1935, 2123, 2163, 2321
StyI	CCWWGG	5 cut(s)	1012, 1413, 1812, 2313, 2484
TaaI	ACNGT	6 cut(s)	206, 1111, 1384, 1846, 2199, 2355
TaiI	ACGT	3 cut(s)	150, 974, 1266
TaqII	GACCGA	2 cut(s)	1309, 1922
TasI	AATT	8 cut(s)	226, 668, 707, 988, 1546, 1679, 2178, 2590
TatI	WGTACW	1 cut(s)	689
TauI	GCSGC	9 cut(s)	46, 49, 69, 138, 141, 1412, 1820, 2084, 2087
TfiI	GAWTC	9 cut(s)	104, 125, 182, 238, 347, 1017, 1120, 2191, 2565
Tru1I	TTAA	3 cut(s)	471, 696, 897
Tru9I	TTAA	3 cut(s)	471, 696, 897
TscAI	CASTG	1 cut(s)	2202
TseFI	GTSAC	7 cut(s)	336, 1086, 1390, 1465, 1759, 1834, 2098
Tsp45I	GTSAC	7 cut(s)	336, 1086, 1390, 1465, 1759, 1834, 2098
TspGWI	ACGGA	7 cut(s)	297, 580, 764, 1519, 1712, 1953, 2117
TspMI	CCCGGG	2 cut(s)	1350, 1875
TspRI	CASTG	1 cut(s)	2202
Tth111I	GACNNNGTC	3 cut(s)	146, 149, 1997
VpaK11BI	GGWCC	2 cut(s)	1184, 2236
XapI	RAATTY	3 cut(s)	226, 668, 2178
XceI	RCATGY	2 cut(s)	404, 1283
XhoI	CTCGAG	3 cut(s)	888, 2033, 2183
XmaI	CCCGGG	2 cut(s)	1350, 1875
XmiI	GTMKAC	2 cut(s)	573, 2001
XspI	CTAG	6 cut(s)	270, 294, 360, 579, 1575, 1652
ZraI	GACGTC	1 cut(s)	148

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.